TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3099514.2.1
(547 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV784361.1|AV784361 AV784361 RAFL5 Arabidopsis thaliana ... 164 2e-039
gb|AV561055.1|AV561055 AV561055 Arabidopsis thaliana green ... 164 2e-039
gb|AY056784.1| Arabidopsis thaliana AT4g02280/T2H3_8 mRNA, ... 164 2e-039
gb|AY051001.1| Arabidopsis thaliana putative sucrose synthe... 164 2e-039
gb|AY142511.1| Arabidopsis thaliana putative sucrose synthe... 164 2e-039
emb|AX507720.1| Sequence 2415 from Patent WO0216655 164 2e-039
ref|NM_116461.2| Arabidopsis thaliana UDP-glycosyltransfera... 164 2e-039
emb|BX828217.1|CNS0A2C8 Arabidopsis thaliana Full-length cD... 160 2e-038
gb|BP611450.1|BP611450 BP611450 RAFL16 Arabidopsis thaliana... 158 1e-037
gb|AV795270.1|AV795270 AV795270 RAFL8 Arabidopsis thaliana ... 154 2e-036
gb|BE521065.1|BE521065 M16F6XP Arabidopsis developing seed ... 148 2e-034
ref|NM_124296.2| Arabidopsis thaliana SUS2 (SUCROSE SYNTHAS... 148 2e-034
gb|AV793987.1|AV793987 AV793987 RAFL8 Arabidopsis thaliana ... 144 2e-033
gb|AV803373.1|AV803373 AV803373 RAFL9 Arabidopsis thaliana ... 141 1e-032
gb|BP606576.1|BP606576 BP606576 RAFL16 Arabidopsis thaliana... 141 1e-032
gb|BP617162.1|BP617162 BP617162 RAFL16 Arabidopsis thaliana... 141 1e-032
gb|BP601056.1|BP601056 BP601056 RAFL16 Arabidopsis thaliana... 139 5e-032
gb|F13913.1|F13913 ATTS4835 Perp-dry-seedA Arabidopsis thal... 137 3e-031
gb|AV784128.1|AV784128 AV784128 RAFL5 Arabidopsis thaliana ... 135 1e-030
gb|CB256374.1|CB256374 80-E014061-027-007-A02q-SP6r MPIZ-AD... 135 1e-030
gb|AV523276.1|AV523276 AV523276 Arabidopsis thaliana aboveg... 135 1e-030
gb|AV543778.1|AV543778 AV543778 Arabidopsis thaliana roots ... 135 1e-030
gb|AV546684.1|AV546684 AV546684 Arabidopsis thaliana roots ... 135 1e-030
gb|AV562019.1|AV562019 AV562019 Arabidopsis thaliana green ... 135 1e-030
gb|AV563573.1|AV563573 AV563573 Arabidopsis thaliana green ... 135 1e-030
emb|AX506925.1| Sequence 1620 from Patent WO0216655 135 1e-030
emb|AX651931.1| Sequence 808 from Patent WO03000898 135 1e-030
dbj|AK222090.1| Arabidopsis thaliana mRNA for sucrose-UDP g... 135 1e-030
ref|NM_122090.2| Arabidopsis thaliana SUS1 (SUCROSE SYNTHAS... 135 1e-030
ref|NM_001036838.1| Arabidopsis thaliana SUS1 (SUCROSE SYNT... 135 1e-030
gb|AV783221.1|AV783221 AV783221 RAFL5 Arabidopsis thaliana ... 132 1e-029
gb|AV813109.1|AV813109 AV813109 RAFL9 Arabidopsis thaliana ... 132 1e-029
gb|AY034958.1| Arabidopsis thaliana putative sucrose syntha... 132 1e-029
ref|NM_114187.3| Arabidopsis thaliana UDP-glycosyltransfera... 132 1e-029
gb|BP583616.1|BP583616 BP583616 RAFL14 Arabidopsis thaliana... 126 7e-028
gb|BP596158.1|BP596158 BP596158 RAFL15 Arabidopsis thaliana... 122 8e-027
gb|BP593848.1|BP593848 BP593848 RAFL15 Arabidopsis thaliana... 118 1e-025
dbj|AB016872.1| Arabidopsis thaliana genomic DNA, chromosom... 100 1e-025
emb|X60987.1|ATSUCSYN A.thaliana sucrose synthase gene 100 1e-025
gb|BP668453.1|BP668453 BP668453 RAFL21 Arabidopsis thaliana... 70 1e-024
gb|BP584128.1|BP584128 BP584128 RAFL14 Arabidopsis thaliana... 112 7e-024
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 112 9e-024
gb|AF075597.1|T2H3 Arabidopsis thaliana BAC T2H3 112 9e-024
emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome... 112 9e-024
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 112 9e-024
gb|BP785428.1|BP785428 BP785428 RAFL7 Arabidopsis thaliana ... 111 1e-023
gb|AV800744.1|AV800744 AV800744 RAFL9 Arabidopsis thaliana ... 108 1e-022
gb|BP597705.1|BP597705 BP597705 RAFL15 Arabidopsis thaliana... 108 1e-022
gb|Z17959.1|Z17959 ATTS0443 Strasbourg-A Arabidopsis thalia... 108 2e-022
gb|BP607317.1|BP607317 BP607317 RAFL16 Arabidopsis thaliana... 107 2e-022
gb|AF296832.1|T1M15 Arabidopsis thaliana BAC T1M15 90 3e-022
emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome ... 92 4e-022
gb|AC074227.1|AC074227 Arabidopsis thaliana chromosome III ... 92 4e-022
>gb|AV784361.1|AV784361 AV784361 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-18-M07 3',
mRNA sequence
Length = 622
Score = 164 bits (352), Expect = 2e-039
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = +2 / -3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP+HW K+S AGLQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 476 KEDPNHWKKVSDAGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFY 297
Query: 182 ILKFRELAKTVPLAID 229
ILKFR+L KTVP D
Sbjct: 296 ILKFRDLVKTVPSTAD 249
>gb|AV561055.1|AV561055 AV561055 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ145b12F 3', mRNA sequence
Length = 608
Score = 164 bits (352), Expect = 2e-039
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = +2 / -2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP+HW K+S AGLQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 478 KEDPNHWKKVSDAGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFY 299
Query: 182 ILKFRELAKTVPLAID 229
ILKFR+L KTVP D
Sbjct: 298 ILKFRDLVKTVPSTAD 251
>gb|AY056784.1| Arabidopsis thaliana AT4g02280/T2H3_8 mRNA, complete cds
Length = 2898
Score = 164 bits (352), Expect = 2e-039
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP+HW K+S AGLQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 2436 KEDPNHWKKVSDAGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFY 2615
Query: 182 ILKFRELAKTVPLAID 229
ILKFR+L KTVP D
Sbjct: 2616 ILKFRDLVKTVPSTAD 2663
>gb|AY051001.1| Arabidopsis thaliana putative sucrose synthetase (At4g02280) mRNA,
complete cds
Length = 2904
Score = 164 bits (352), Expect = 2e-039
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP+HW K+S AGLQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 2411 KEDPNHWKKVSDAGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFY 2590
Query: 182 ILKFRELAKTVPLAID 229
ILKFR+L KTVP D
Sbjct: 2591 ILKFRDLVKTVPSTAD 2638
>gb|AY142511.1| Arabidopsis thaliana putative sucrose synthetase (At4g02280) mRNA,
complete cds
Length = 2506
Score = 164 bits (352), Expect = 2e-039
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP+HW K+S AGLQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 2197 KEDPNHWKKVSDAGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFY 2376
Query: 182 ILKFRELAKTVPLAID 229
ILKFR+L KTVP D
Sbjct: 2377 ILKFRDLVKTVPSTAD 2424
>emb|AX507720.1| Sequence 2415 from Patent WO0216655
Length = 2430
Score = 164 bits (352), Expect = 2e-039
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP+HW K+S AGLQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 2197 KEDPNHWKKVSDAGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFY 2376
Query: 182 ILKFRELAKTVPLAID 229
ILKFR+L KTVP D
Sbjct: 2377 ILKFRDLVKTVPSTAD 2424
>ref|NM_116461.2| Arabidopsis thaliana UDP-glycosyltransferase/ sucrose synthase/
transferase, transferring glycosyl groups AT4G02280 mRNA,
complete cds
Length = 2913
Score = 164 bits (352), Expect = 2e-039
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP+HW K+S AGLQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 2436 KEDPNHWKKVSDAGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFY 2615
Query: 182 ILKFRELAKTVPLAID 229
ILKFR+L KTVP D
Sbjct: 2616 ILKFRDLVKTVPSTAD 2663
>emb|BX828217.1|CNS0A2C8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH64ZE09 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2686
Score = 160 bits (345), Expect = 2e-038
Identities = 63/76 (82%), Positives = 68/76 (89%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP+HW K+S AG QRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 2258 KEDPNHWKKVSDAGPQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFY 2437
Query: 182 ILKFRELAKTVPLAID 229
ILKFR+L KTVP D
Sbjct: 2438 ILKFRDLVKTVPSTAD 2485
>gb|BP611450.1|BP611450 BP611450 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-85-M21 3',
mRNA sequence
Length = 467
Score = 158 bits (339), Expect = 1e-037
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = +2 / -1
Query: 11 PDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILK 190
P+HW K+S AGLQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFYILK
Sbjct: 467 PNHWKKVSDAGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILK 288
Query: 191 FRELAKTVPLAID 229
FR+L KTVP D
Sbjct: 287 FRDLVKTVPSTAD 249
>gb|AV795270.1|AV795270 AV795270 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-16-M13 3',
mRNA sequence
Length = 449
Score = 154 bits (331), Expect = 2e-036
Identities = 61/71 (85%), Positives = 64/71 (90%)
Frame = +2 / -2
Query: 17 HWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFR 196
HW K+S AGLQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFYILKFR
Sbjct: 448 HWKKVSDAGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFR 269
Query: 197 ELAKTVPLAID 229
+L KTVP D
Sbjct: 268 DLVKTVPSTAD 236
>gb|BE521065.1|BE521065 M16F6XP Arabidopsis developing seed Arabidopsis thaliana cDNA clone
M16F6 3', mRNA sequence
Length = 403
Score = 148 bits (317), Expect = 2e-034
Identities = 57/75 (76%), Positives = 67/75 (89%)
Frame = +2 / -2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
+P+HWVKIS GL+RIYE+YTWK YSERL+ LAGVY FWK+VSKLERRETRRYLEMFY L
Sbjct: 318 NPNHWVKISEGGLKRIYERYTWKKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYSL 139
Query: 188 KFRELAKTVPLAIDQ 232
KFR+LA ++PLA D+
Sbjct: 138 KFRDLANSIPLATDE 94
>ref|NM_124296.2| Arabidopsis thaliana SUS2 (SUCROSE SYNTHASE 2);
UDP-glycosyltransferase/ sucrose synthase/ transferase,
transferring glycosyl groups AT5G49190 (SUS2) mRNA,
complete cds
Length = 2511
Score = 148 bits (317), Expect = 2e-034
Identities = 57/75 (76%), Positives = 67/75 (89%)
Frame = +2 / +1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
+P+HWVKIS GL+RIYE+YTWK YSERL+ LAGVY FWK+VSKLERRETRRYLEMFY L
Sbjct: 2194 NPNHWVKISEGGLKRIYERYTWKKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYSL 2373
Query: 188 KFRELAKTVPLAIDQ 232
KFR+LA ++PLA D+
Sbjct: 2374 KFRDLANSIPLATDE 2418
>gb|AV793987.1|AV793987 AV793987 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-11-B11 3',
mRNA sequence
Length = 451
Score = 144 bits (309), Expect = 2e-033
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +2 / -3
Query: 29 ISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFRELAK 208
+S AGLQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFYILKFR+L K
Sbjct: 449 VSDAGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVK 270
Query: 209 TVPLAID 229
TVP D
Sbjct: 269 TVPSTAD 249
>gb|AV803373.1|AV803373 AV803373 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-35-E20 3',
mRNA sequence
Length = 411
Score = 141 bits (303), Expect = 1e-032
Identities = 57/64 (89%), Positives = 59/64 (92%)
Frame = +2 / -3
Query: 38 AGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFRELAKTVP 217
AGLQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFYILKFR+L KTVP
Sbjct: 406 AGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKTVP 227
Query: 218 LAID 229
D
Sbjct: 226 STAD 215
>gb|BP606576.1|BP606576 BP606576 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-71-G23 3',
mRNA sequence
Length = 432
Score = 141 bits (303), Expect = 1e-032
Identities = 57/64 (89%), Positives = 59/64 (92%)
Frame = +2 / -3
Query: 38 AGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFRELAKTVP 217
AGLQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFYILKFR+L KTVP
Sbjct: 427 AGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKTVP 248
Query: 218 LAID 229
D
Sbjct: 247 STAD 236
>gb|BP617162.1|BP617162 BP617162 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-22-N04 3',
mRNA sequence
Length = 441
Score = 141 bits (303), Expect = 1e-032
Identities = 57/64 (89%), Positives = 59/64 (92%)
Frame = +2 / -2
Query: 38 AGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFRELAKTVP 217
AGLQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFYILKFR+L KTVP
Sbjct: 440 AGLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKTVP 261
Query: 218 LAID 229
D
Sbjct: 260 STAD 249
>gb|BP601056.1|BP601056 BP601056 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-48-K02 3',
mRNA sequence
Length = 447
Score = 139 bits (299), Expect = 5e-032
Identities = 56/63 (88%), Positives = 58/63 (92%)
Frame = +2 / -3
Query: 41 GLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFRELAKTVPL 220
GLQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFYILKFR+L KTVP
Sbjct: 439 GLQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKTVPS 260
Query: 221 AID 229
D
Sbjct: 259 TAD 251
>gb|F13913.1|F13913 ATTS4835 Perp-dry-seedA Arabidopsis thaliana cDNA clone PAP1758 3'
similar to sucrose synthase, mRNA sequence
Length = 337
Score = 137 bits (293), Expect = 3e-031
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +2 / -2
Query: 44 LQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFRELAKTVPLA 223
LQRIYE+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFYILKFR+L KTVP
Sbjct: 336 LQRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKTVPST 157
Query: 224 ID 229
D
Sbjct: 156 AD 151
>gb|AV784128.1|AV784128 AV784128 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-16-I09 3',
mRNA sequence
Length = 622
Score = 135 bits (289), Expect = 1e-030
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = +2 / -3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP HW +IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY
Sbjct: 476 KEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFY 297
Query: 182 ILKFRELAKTVPLAID 229
LK+R LA+ VPLA D
Sbjct: 296 ALKYRPLAQAVPLAQD 249
>gb|CB256374.1|CB256374 80-E014061-027-007-A02q-SP6r MPIZ-ADIS-027 Arabidopsis thaliana
cDNA clone MPIZp772A027Q 3-PRIME, mRNA sequence
Length = 533
Score = 135 bits (289), Expect = 1e-030
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = +2 / -3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP HW +IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY
Sbjct: 477 KEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFY 298
Query: 182 ILKFRELAKTVPLAID 229
LK+R LA+ VPLA D
Sbjct: 297 ALKYRPLAQAVPLAQD 250
>gb|AV523276.1|AV523276 AV523276 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL22f02F 3', mRNA
sequence
Length = 581
Score = 135 bits (289), Expect = 1e-030
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = +2 / -3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP HW +IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY
Sbjct: 435 KEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFY 256
Query: 182 ILKFRELAKTVPLAID 229
LK+R LA+ VPLA D
Sbjct: 255 ALKYRPLAQAVPLAQD 208
>gb|AV543778.1|AV543778 AV543778 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ23a06F 3', mRNA sequence
Length = 504
Score = 135 bits (289), Expect = 1e-030
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = +2 / -1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP HW +IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY
Sbjct: 408 KEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFY 229
Query: 182 ILKFRELAKTVPLAID 229
LK+R LA+ VPLA D
Sbjct: 228 ALKYRPLAQAVPLAQD 181
>gb|AV546684.1|AV546684 AV546684 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL17h11F 3', mRNA sequence
Length = 509
Score = 135 bits (289), Expect = 1e-030
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = +2 / -1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP HW +IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY
Sbjct: 461 KEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFY 282
Query: 182 ILKFRELAKTVPLAID 229
LK+R LA+ VPLA D
Sbjct: 281 ALKYRPLAQAVPLAQD 234
>gb|AV562019.1|AV562019 AV562019 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ162f03F 3', mRNA sequence
Length = 535
Score = 135 bits (289), Expect = 1e-030
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = +2 / -1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP HW +IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY
Sbjct: 475 KEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFY 296
Query: 182 ILKFRELAKTVPLAID 229
LK+R LA+ VPLA D
Sbjct: 295 ALKYRPLAQAVPLAQD 248
>gb|AV563573.1|AV563573 AV563573 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ189f03F 3', mRNA sequence
Length = 571
Score = 135 bits (289), Expect = 1e-030
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = +2 / -1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP HW +IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY
Sbjct: 475 KEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFY 296
Query: 182 ILKFRELAKTVPLAID 229
LK+R LA+ VPLA D
Sbjct: 295 ALKYRPLAQAVPLAQD 248
>emb|AX506925.1| Sequence 1620 from Patent WO0216655
Length = 2427
Score = 135 bits (289), Expect = 1e-030
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP HW +IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY
Sbjct: 2194 KEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFY 2373
Query: 182 ILKFRELAKTVPLAID 229
LK+R LA+ VPLA D
Sbjct: 2374 ALKYRPLAQAVPLAQD 2421
>emb|AX651931.1| Sequence 808 from Patent WO03000898
Length = 2427
Score = 135 bits (289), Expect = 1e-030
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP HW +IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY
Sbjct: 2194 KEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFY 2373
Query: 182 ILKFRELAKTVPLAID 229
LK+R LA+ VPLA D
Sbjct: 2374 ALKYRPLAQAVPLAQD 2421
>dbj|AK222090.1| Arabidopsis thaliana mRNA for sucrose-UDP glucosyltransferase,
complete cds, clone: RAFL22-85-C03
Length = 1149
Score = 135 bits (289), Expect = 1e-030
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP HW +IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY
Sbjct: 634 KEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFY 813
Query: 182 ILKFRELAKTVPLAID 229
LK+R LA+ VPLA D
Sbjct: 814 ALKYRPLAQAVPLAQD 861
>ref|NM_122090.2| Arabidopsis thaliana SUS1 (SUCROSE SYNTHASE 1);
UDP-glycosyltransferase/ sucrose synthase AT5G20830
(SUS1) transcript variant AT5G20830.1 mRNA, complete cds
Length = 2887
Score = 135 bits (289), Expect = 1e-030
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP HW +IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY
Sbjct: 2281 KEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFY 2460
Query: 182 ILKFRELAKTVPLAID 229
LK+R LA+ VPLA D
Sbjct: 2461 ALKYRPLAQAVPLAQD 2508
>ref|NM_001036838.1| Arabidopsis thaliana SUS1 (SUCROSE SYNTHASE 1);
UDP-glycosyltransferase/ sucrose synthase AT5G20830
(SUS1) transcript variant AT5G20830.2 mRNA, complete cds
Length = 2879
Score = 135 bits (289), Expect = 1e-030
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K+DP HW +IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY
Sbjct: 2273 KEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFY 2452
Query: 182 ILKFRELAKTVPLAID 229
LK+R LA+ VPLA D
Sbjct: 2453 ALKYRPLAQAVPLAQD 2500
>gb|AV783221.1|AV783221 AV783221 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-07-J05 3',
mRNA sequence
Length = 697
Score = 132 bits (282), Expect = 1e-029
Identities = 51/77 (66%), Positives = 63/77 (81%)
Frame = +2 / -1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP HW +IS GL+RI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E+RRYLEMFY
Sbjct: 370 KHDPSHWDQISLGGLERIQEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFY 191
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R LA+ VPLA ++
Sbjct: 190 ALKYRPLAQAVPLAHEE 140
>gb|AV813109.1|AV813109 AV813109 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-77-A21 3',
mRNA sequence
Length = 402
Score = 132 bits (282), Expect = 1e-029
Identities = 51/77 (66%), Positives = 63/77 (81%)
Frame = +2 / -3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP HW +IS GL+RI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E+RRYLEMFY
Sbjct: 376 KHDPSHWDQISLGGLERIQEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFY 197
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R LA+ VPLA ++
Sbjct: 196 ALKYRPLAQAVPLAHEE 146
>gb|AY034958.1| Arabidopsis thaliana putative sucrose synthase (At3g43190) mRNA,
complete cds
Length = 1798
Score = 132 bits (282), Expect = 1e-029
Identities = 51/77 (66%), Positives = 63/77 (81%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP HW +IS GL+RI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E+RRYLEMFY
Sbjct: 1411 KHDPSHWDQISLGGLERIQEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFY 1590
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R LA+ VPLA ++
Sbjct: 1591 ALKYRPLAQAVPLAHEE 1641
>ref|NM_114187.3| Arabidopsis thaliana UDP-glycosyltransferase/ sucrose synthase/
transferase, transferring glycosyl groups AT3G43190 mRNA,
complete cds
Length = 2717
Score = 132 bits (282), Expect = 1e-029
Identities = 51/77 (66%), Positives = 63/77 (81%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP HW +IS GL+RI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E+RRYLEMFY
Sbjct: 2347 KHDPSHWDQISLGGLERIQEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFY 2526
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R LA+ VPLA ++
Sbjct: 2527 ALKYRPLAQAVPLAHEE 2577
>gb|BP583616.1|BP583616 BP583616 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-42-F03 3',
mRNA sequence
Length = 425
Score = 126 bits (269), Expect = 7e-028
Identities = 50/77 (64%), Positives = 62/77 (80%)
Frame = +2 / -3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP HW +IS GL+RI EKYT +IYS+RL+ L GVYGFWK+VS L+R E+RRYLEMFY
Sbjct: 417 KHDPSHWDQISLGGLERIQEKYTCQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFY 238
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R LA+ VPLA ++
Sbjct: 237 ALKYRPLAQAVPLAHEE 187
>gb|BP596158.1|BP596158 BP596158 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-32-P06 3',
mRNA sequence
Length = 457
Score = 122 bits (261), Expect = 8e-027
Identities = 49/70 (70%), Positives = 57/70 (81%)
Frame = +2 / -1
Query: 20 WVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFRE 199
W +IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY LK+R
Sbjct: 457 WDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRP 278
Query: 200 LAKTVPLAID 229
LA+ VPLA D
Sbjct: 277 LAQAVPLAQD 248
>gb|BP593848.1|BP593848 BP593848 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-23-K16 3',
mRNA sequence
Length = 458
Score = 118 bits (253), Expect = 1e-025
Identities = 48/68 (70%), Positives = 56/68 (82%)
Frame = +2 / -2
Query: 26 KISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFRELA 205
+IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY LK+R LA
Sbjct: 451 EISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLA 272
Query: 206 KTVPLAID 229
+ VPLA D
Sbjct: 271 QAVPLAQD 248
>dbj|AB016872.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21P3
Length = 86001
Score = 100 bits (212), Expect(2) = 1e-025
Identities = 39/47 (82%), Positives = 43/47 (91%)
Frame = +2 / -1
Query: 62 KYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFREL 202
+YTWK YSERL+ LAGVY FWK+VSKLERRETRRYLEMFY LKFR+L
Sbjct: 21729 RYTWKKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDL 21589
Score = 38.2 bits (77), Expect(2) = 1e-025
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2 / -3
Query: 8 DPDHWVKISGAGLQRIYEK 64
+P+HWVKIS GL+RIYE+
Sbjct: 21871 NPNHWVKISEGGLKRIYER 21815
>emb|X60987.1|ATSUCSYN A.thaliana sucrose synthase gene
Length = 4441
Score = 100 bits (212), Expect(2) = 1e-025
Identities = 39/47 (82%), Positives = 43/47 (91%)
Frame = +2 / +3
Query: 62 KYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFREL 202
+YTWK YSERL+ LAGVY FWK+VSKLERRETRRYLEMFY LKFR+L
Sbjct: 4146 RYTWKKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDL 4286
Score = 38.2 bits (77), Expect(2) = 1e-025
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2 / +2
Query: 8 DPDHWVKISGAGLQRIYEK 64
+P+HWVKIS GL+RIYE+
Sbjct: 4004 NPNHWVKISEGGLKRIYER 4060
>gb|BP668453.1|BP668453 BP668453 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-27-E12 3',
mRNA sequence
Length = 437
Score = 70.3 bits (147), Expect(2) = 1e-024
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +2 / -1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGF 121
K DP HW +IS GL+RI EKYTW+IYS+RL+ L GVY F
Sbjct: 419 KHDPSHWDQISLGGLERIQEKYTWQIYSQRLLTLTGVYAF 300
Score = 64.8 bits (135), Expect(2) = 1e-024
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +2 / -3
Query: 119 FWKYVSKLERRETRRYLEMFYILKFRELAKTVPLAIDQ 232
FWK+VS L+R E+RRYLEMFY LK+R LA+ VPLA ++
Sbjct: 303 FWKHVSNLDRLESRRYLEMFYALKYRPLAQAVPLAHEE 190
>gb|BP584128.1|BP584128 BP584128 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-44-O17 3',
mRNA sequence
Length = 426
Score = 112 bits (240), Expect = 7e-024
Identities = 46/72 (63%), Positives = 56/72 (77%)
Frame = +2 / -1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP HW +IS GL RI EKYT +IYS+RL+ L GVYGFWK+ S L+R +RRYL+MFY L
Sbjct: 378 DPSHWDQISLGGL*RIQEKYTCQIYSQRLLTLTGVYGFWKHFSNLDRL*SRRYLDMFYAL 199
Query: 188 KFRELAKTVPLA 223
K+R LA+ VPLA
Sbjct: 198 KYRPLAQAVPLA 163
>emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, short arm
Length = 3052119
Score = 112 bits (239), Expect = 9e-024
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = +2 / +2
Query: 62 KYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFREL 202
+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFYILKFR+L
Sbjct: 997271 RYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDL 997411
>gb|AF075597.1|T2H3 Arabidopsis thaliana BAC T2H3
Length = 48689
Score = 112 bits (239), Expect = 9e-024
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = +2 / -1
Query: 62 KYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFREL 202
+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFYILKFR+L
Sbjct: 18167 RYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDL 18027
>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6
Length = 194892
Score = 112 bits (239), Expect = 9e-024
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = +2 / +1
Query: 62 KYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFREL 202
+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFYILKFR+L
Sbjct: 34111 RYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDL 34251
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 112 bits (239), Expect = 9e-024
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = +2 / +1
Query: 62 KYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFREL 202
+YTWKIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFYILKFR+L
Sbjct: 998461 RYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDL 998601
>gb|BP785428.1|BP785428 BP785428 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-94-M24 3',
mRNA sequence
Length = 407
Score = 111 bits (238), Expect = 1e-023
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = +2 / -3
Query: 74 KIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFRELAKTVPLAID 229
KIYSERLM LAGVYGFWKYVSKLERRETRRYLEMFYILKFR+L KTVP D
Sbjct: 405 KIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKTVPSTAD 250
>gb|AV800744.1|AV800744 AV800744 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-25-F16 3',
mRNA sequence
Length = 435
Score = 108 bits (231), Expect = 1e-022
Identities = 43/62 (69%), Positives = 51/62 (82%)
Frame = +2 / -3
Query: 44 LQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFRELAKTVPLA 223
LQRI EKYTW+IYS+RL+ L GVYG WK+VS L+R E RRYLEMFY LK+R +A+ VPLA
Sbjct: 433 LQRIEEKYTWQIYSQRLLTLTGVYGLWKHVSNLDRLEARRYLEMFYALKYRPVAQAVPLA 254
Query: 224 ID 229
D
Sbjct: 253 QD 248
>gb|BP597705.1|BP597705 BP597705 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-40-I17 3',
mRNA sequence
Length = 428
Score = 108 bits (231), Expect = 1e-022
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = +2 / -2
Query: 50 RIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFRELAKTVPLAID 229
RI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEMFY LK+R LA+ VPLA D
Sbjct: 427 RIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLAQD 248
>gb|Z17959.1|Z17959 ATTS0443 Strasbourg-A Arabidopsis thaliana cDNA clone SASFb69 5'
similar to Potato sucrose synthase (sucrose-UDP
glucosyltransferase). GenBank entry M18745., mRNA
sequence
Length = 234
Score = 108 bits (230), Expect = 2e-022
Identities = 41/58 (70%), Positives = 48/58 (82%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEM 175
K+DP HW +IS GLQRI EKYTW+IYS+RL+ L GVYGFWK+VS L+R E RRYLEM
Sbjct: 37 KEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEM 210
>gb|BP607317.1|BP607317 BP607317 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-74-G03 3',
mRNA sequence
Length = 404
Score = 107 bits (229), Expect = 2e-022
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +2 / -1
Query: 80 YSERLMILAGVYGFWKYVSKLERRETRRYLEMFYILKFRELAKTVPLAID 229
YSERLM LAGVYGFWKYVSKLERRETRRYLEMFYILKFR+L KTVP D
Sbjct: 404 YSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKTVPSTAD 255
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,053,961,880
Number of Sequences: 1013581
Number of extensions: 13306491
Number of successful extensions: 276605
Number of sequences better than 1.0e-020: 56
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 31151400210
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)