TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3071761.2.1
(638 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV532716.1|AV532716 AV532716 Arabidopsis thaliana flower... 199 5e-050
gb|AF106086.1|AF106086 Arabidopsis thaliana 4-coumarate:CoA... 199 5e-050
gb|AY099695.1| Arabidopsis thaliana putative 4-coumarate:Co... 199 5e-050
gb|BT000296.1| Arabidopsis thaliana putative 4-coumarate:Co... 199 5e-050
emb|AX505882.1| Sequence 577 from Patent WO0216655 199 5e-050
gb|AY376728.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 199 5e-050
ref|NM_113019.2| Arabidopsis thaliana 4CL2; 4-coumarate-CoA... 199 5e-050
gb|U18675.1|ATU18675 Arabidopsis thaliana 4-coumarate--coen... 197 2e-049
gb|AY099747.1| Arabidopsis thaliana 4-coumarate:CoA ligase ... 197 2e-049
emb|AX505869.1| Sequence 564 from Patent WO0216655 197 2e-049
gb|AY376729.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 197 2e-049
emb|BX822773.1|CNS0A78O Arabidopsis thaliana Full-length cD... 197 2e-049
ref|NM_104046.2| Arabidopsis thaliana 4CL1 (4-COUMARATE:COA... 197 2e-049
gb|BX836070.1|BX836070 BX836070 Arabidopsis thaliana Hormon... 196 6e-049
emb|BX815525.1|CNS0AE0I Arabidopsis thaliana Full-length cD... 196 6e-049
gb|AV802214.1|AV802214 AV802214 RAFL9 Arabidopsis thaliana ... 193 6e-048
gb|AF106088.1|AF106088 Arabidopsis thaliana 4-coumarate:CoA... 193 6e-048
gb|AY058083.1| Arabidopsis thaliana At1g65060/F16G16_6 mRNA... 193 6e-048
gb|AY090306.1| Arabidopsis thaliana At1g65060/F16G16_6 mRNA... 193 6e-048
emb|AX412572.1| Sequence 336 from Patent WO0222675 193 6e-048
emb|AX506095.1| Sequence 790 from Patent WO0216655 193 6e-048
gb|AY376730.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 193 6e-048
ref|NM_105180.2| Arabidopsis thaliana 4CL3; 4-coumarate-CoA... 193 6e-048
gb|AV558658.1|AV558658 AV558658 Arabidopsis thaliana green ... 177 3e-043
ref|NM_179513.1| Arabidopsis thaliana 4CL3; 4-coumarate-CoA... 160 3e-043
gb|AY095992.1| Arabidopsis thaliana AT3g21230/MXL8_9 mRNA, ... 177 4e-043
gb|BT000614.1| Arabidopsis thaliana putative 4-coumarate:Co... 177 4e-043
gb|AY250837.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 177 4e-043
gb|AY376732.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 177 4e-043
emb|BX823716.1|CNS0A6KI Arabidopsis thaliana Full-length cD... 177 4e-043
emb|BX824168.1|CNS0A6ZK Arabidopsis thaliana Full-length cD... 177 4e-043
emb|BX824573.1|CNS0A6WB Arabidopsis thaliana Full-length cD... 177 4e-043
emb|BX824596.1|CNS0A6SI Arabidopsis thaliana Full-length cD... 177 4e-043
emb|BX822898.1|CNS0A75P Arabidopsis thaliana Full-length cD... 177 4e-043
emb|BX823111.1|CNS0A76K Arabidopsis thaliana Full-length cD... 177 4e-043
ref|NM_113018.3| Arabidopsis thaliana catalytic AT3G21230 m... 177 4e-043
gb|AI999552.1|AI999552 701556371 A. thaliana, Columbia Col-... 160 6e-043
emb|BX814606.1|CNS0ADL5 Arabidopsis thaliana Full-length cD... 164 8e-042
gb|BP793536.1|BP793536 BP793536 RAFL7 Arabidopsis thaliana ... 171 1e-041
dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosom... 77 2e-041
gb|AF106085.1|AF106085 Arabidopsis thaliana 4-coumarate:CoA... 77 2e-041
gb|BX835589.1|BX835589 BX835589 Arabidopsis thaliana Adult ... 162 1e-038
gb|AF106084.1|AF106084 Arabidopsis thaliana 4-coumarate:CoA... 77 1e-038
gb|BX835847.1|BX835847 BX835847 Arabidopsis thaliana Hormon... 161 2e-038
gb|BX836241.1|BX836241 BX836241 Arabidopsis thaliana Hormon... 161 2e-038
gb|AF360250.1| Arabidopsis thaliana unknown protein (At1g20... 161 2e-038
gb|AY040047.1| Arabidopsis thaliana unknown protein (At1g20... 161 2e-038
gb|AY250838.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 161 2e-038
emb|BX814850.1|CNS0ACYK Arabidopsis thaliana Full-length cD... 161 2e-038
emb|BX814596.1|CNS0ADI2 Arabidopsis thaliana Full-length cD... 161 2e-038
ref|NM_101901.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 161 2e-038
gb|AV814104.1|AV814104 AV814104 RAFL9 Arabidopsis thaliana ... 159 1e-037
gb|AV548209.1|AV548209 AV548209 Arabidopsis thaliana roots ... 159 1e-037
emb|BX814621.1|CNS0ADOY Arabidopsis thaliana Full-length cD... 157 2e-037
gb|AV787325.1|AV787325 AV787325 RAFL6 Arabidopsis thaliana ... 157 3e-037
emb|BX825074.1|CNS0A6ZC Arabidopsis thaliana Full-length cD... 154 3e-036
gb|AY250833.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 153 6e-036
gb|AC025294.14|AC025294 Arabidopsis thaliana chromosome 1 B... 77 1e-035
ref|NM_101898.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 151 2e-035
gb|AI997890.1|AI997890 701671251 A. thaliana, Columbia Col-... 150 4e-035
gb|BT005689.1| Arabidopsis thaliana clone U50818 putative 4... 150 4e-035
gb|AY250832.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 150 4e-035
gb|AY376735.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 150 4e-035
dbj|AK118041.1| Arabidopsis thaliana At5g38120 mRNA for put... 150 4e-035
ref|NM_123172.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 150 4e-035
gb|CB074237.1|CB074237 EST00751 Virulent Peronospora parasi... 148 2e-034
gb|AY091079.1| Arabidopsis thaliana putative 4-coumarate--C... 148 2e-034
gb|AY122950.1| Arabidopsis thaliana putative 4-coumarate--C... 148 2e-034
gb|AY250839.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 148 2e-034
ref|NM_116755.4| Arabidopsis thaliana 4-coumarate-CoA ligas... 148 2e-034
gb|AV520672.1|AV520672 AV520672 Arabidopsis thaliana aboveg... 146 7e-034
gb|AY136459.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 146 7e-034
gb|AY250835.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 146 7e-034
gb|BT010394.1| Arabidopsis thaliana At5g63380 mRNA, complet... 146 7e-034
gb|AY376731.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 146 7e-034
emb|BX832101.1|CNS0A10J Arabidopsis thaliana Full-length cD... 146 7e-034
ref|NM_125733.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 146 7e-034
ref|NM_202143.1| Arabidopsis thaliana 4-coumarate-CoA ligas... 87 1e-033
emb|BX813596.1|CNS0ADNX Arabidopsis thaliana Full-length cD... 87 1e-033
emb|BX815999.1|CNS0ADB5 Arabidopsis thaliana Full-length cD... 144 2e-033
gb|AI997382.1|AI997382 701553708 A. thaliana, Columbia Col-... 144 2e-033
gb|AV556332.1|AV556332 AV556332 Arabidopsis thaliana green ... 144 2e-033
gb|BT005912.1| Arabidopsis thaliana At4g19010 gene, complet... 144 2e-033
gb|AY250834.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 144 2e-033
gb|AY376733.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 144 2e-033
dbj|AK117362.1| Arabidopsis thaliana At4g19010 mRNA for put... 144 2e-033
emb|CQ803730.1| Sequence 141 from Patent WO2004035798 144 2e-033
ref|NM_118019.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 144 2e-033
gb|BP596151.1|BP596151 BP596151 RAFL15 Arabidopsis thaliana... 67 4e-032
gb|AY250836.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 139 6e-032
gb|AY376734.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 139 6e-032
ref|NM_104972.1| Arabidopsis thaliana 4-coumarate-CoA ligas... 139 6e-032
gb|BP785335.1|BP785335 BP785335 RAFL7 Arabidopsis thaliana ... 139 8e-032
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 77 1e-031
gb|AV543520.1|AV543520 AV543520 Arabidopsis thaliana roots ... 136 5e-031
emb|BX816812.1|CNS0AD1Q Arabidopsis thaliana Full-length cD... 132 2e-030
emb|BX814177.1|CNS0ADT8 Arabidopsis thaliana Full-length cD... 133 7e-030
gb|BP584678.1|BP584678 BP584678 RAFL14 Arabidopsis thaliana... 132 1e-029
gb|BP794586.1|BP794586 BP794586 RAFL7 Arabidopsis thaliana ... 131 2e-029
gb|BP777131.1|BP777131 BP777131 RAFL7 Arabidopsis thaliana ... 130 3e-029
ref|NM_101899.3| Arabidopsis thaliana 4-coumarate-CoA ligas... 79 4e-029
emb|BX814716.1|CNS0ADOJ Arabidopsis thaliana Full-length cD... 79 4e-029
gb|BP578284.1|BP578284 BP578284 RAFL14 Arabidopsis thaliana... 130 5e-029
gb|BP789073.1|BP789073 BP789073 RAFL7 Arabidopsis thaliana ... 128 1e-028
gb|AV814858.1|AV814858 AV814858 RAFL9 Arabidopsis thaliana ... 126 8e-028
gb|AV547257.1|AV547257 AV547257 Arabidopsis thaliana roots ... 125 1e-027
gb|AV533259.1|AV533259 AV533259 Arabidopsis thaliana flower... 123 5e-027
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 87 8e-026
gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis tha... 87 1e-025
gb|AA712582.1|AA712582 31715 Lambda-PRL2 Arabidopsis thalia... 116 5e-025
gb|AU230141.1|AU230141 AU230141 RAFL19 Arabidopsis thaliana... 88 5e-025
gb|BX835730.1|BX835730 BX835730 Arabidopsis thaliana Adult ... 93 1e-024
gb|AV558307.1|AV558307 AV558307 Arabidopsis thaliana green ... 114 2e-024
gb|T42724.1|T42724 5987 Lambda-PRL2 Arabidopsis thaliana cD... 113 4e-024
gb|BX835771.1|BX835771 BX835771 Arabidopsis thaliana Adult ... 87 2e-023
gb|AC011000.3|F16P17 Sequence of BAC F16P17 from Arabidopsi... 68 3e-023
gb|BP564287.1|BP564287 BP564287 RAFL14 Arabidopsis thaliana... 70 1e-022
emb|BX827081.1|CNS0A38R Arabidopsis thaliana Full-length cD... 96 3e-022
dbj|AB023035.1| Arabidopsis thaliana genomic DNA, chromosom... 46 6e-022
gb|BP786225.1|BP786225 BP786225 RAFL7 Arabidopsis thaliana ... 105 1e-021
gb|BP817201.1|BP817201 BP817201 RAFL19 Arabidopsis thaliana... 104 2e-021
dbj|AK220883.1| Arabidopsis thaliana mRNA for putative 4-co... 104 2e-021
gb|AF106087.1|AF106087 Arabidopsis thaliana 4-coumarate:CoA... 68 3e-021
gb|BP650654.1|BP650654 BP650654 RAFL19 Arabidopsis thaliana... 104 3e-021
emb|BX813547.1|CNS0ADKC Arabidopsis thaliana Full-length cD... 92 8e-021
>gb|AV532716.1|AV532716 AV532716 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB048e10F 3', mRNA sequence
Length = 555
Score = 199 bits (430), Expect = 5e-050
Identities = 83/110 (75%), Positives = 100/110 (90%)
Frame = +2 / -2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELE+LLI HPEI D AVV+M ++ AGE+PVAF+VR++ S
Sbjct: 521 FIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVAMKEEDAGEVPVAFVVRSKDSN 342
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++EDEIKQFV+K+VVFYK+I+KVFFT+SIPK PSGKILRKDLRARLA G+
Sbjct: 341 ISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLRARLANGL 192
Score = 139 bits (298), Expect = 8e-032
Identities = 71/109 (65%), Positives = 76/109 (69%)
Frame = -3 / +1
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P ASLAL+SFL I PDG LG++SVK TL I L* TT TNCLISSS E T AT
Sbjct: 196 PFASLALRSFLNIFPDGALGIESVKNTLLILL*NTTCFDTNCLISSSDIFESFDLTTNAT 375
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSF+ TTA SLISG MR SSSAG T PLYLM S +LSTMK
Sbjct: 376 GTSPASSSFMATTATSLISG*PMRRDSSSAGAT*NPLYLMSSFNLSTMK 522
>gb|AF106086.1|AF106086 Arabidopsis thaliana 4-coumarate:CoA ligase 2 mRNA, complete cds
Length = 1944
Score = 199 bits (430), Expect = 5e-050
Identities = 83/110 (75%), Positives = 100/110 (90%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELE+LLI HPEI D AVV+M ++ AGE+PVAF+VR++ S
Sbjct: 1399 FIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVAMKEEDAGEVPVAFVVRSKDSN 1578
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++EDEIKQFV+K+VVFYK+I+KVFFT+SIPK PSGKILRKDLRARLA G+
Sbjct: 1579 ISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLRARLANGL 1728
Score = 139 bits (298), Expect = 8e-032
Identities = 71/109 (65%), Positives = 76/109 (69%)
Frame = -3 / -2
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P ASLAL+SFL I PDG LG++SVK TL I L* TT TNCLISSS E T AT
Sbjct: 1724 PFASLALRSFLNIFPDGALGIESVKNTLLILL*NTTCFDTNCLISSSDIFESFDLTTNAT 1545
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSF+ TTA SLISG MR SSSAG T PLYLM S +LSTMK
Sbjct: 1544 GTSPASSSFMATTATSLISG*PMRRDSSSAGAT*NPLYLMSSFNLSTMK 1398
>gb|AY099695.1| Arabidopsis thaliana putative 4-coumarate:CoA ligase 2 (At3g21240)
mRNA, complete cds
Length = 1824
Score = 199 bits (430), Expect = 5e-050
Identities = 83/110 (75%), Positives = 100/110 (90%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELE+LLI HPEI D AVV+M ++ AGE+PVAF+VR++ S
Sbjct: 1370 FIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVAMKEEDAGEVPVAFVVRSKDSN 1549
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++EDEIKQFV+K+VVFYK+I+KVFFT+SIPK PSGKILRKDLRARLA G+
Sbjct: 1550 ISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLRARLANGL 1699
Score = 139 bits (298), Expect = 8e-032
Identities = 71/109 (65%), Positives = 76/109 (69%)
Frame = -3 / -1
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P ASLAL+SFL I PDG LG++SVK TL I L* TT TNCLISSS E T AT
Sbjct: 1695 PFASLALRSFLNIFPDGALGIESVKNTLLILL*NTTCFDTNCLISSSDIFESFDLTTNAT 1516
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSF+ TTA SLISG MR SSSAG T PLYLM S +LSTMK
Sbjct: 1515 GTSPASSSFMATTATSLISG*PMRRDSSSAGAT*NPLYLMSSFNLSTMK 1369
>gb|BT000296.1| Arabidopsis thaliana putative 4-coumarate:CoA ligase 2 (At3g21240)
mRNA, complete cds
Length = 1744
Score = 199 bits (430), Expect = 5e-050
Identities = 83/110 (75%), Positives = 100/110 (90%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELE+LLI HPEI D AVV+M ++ AGE+PVAF+VR++ S
Sbjct: 1333 FIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVAMKEEDAGEVPVAFVVRSKDSN 1512
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++EDEIKQFV+K+VVFYK+I+KVFFT+SIPK PSGKILRKDLRARLA G+
Sbjct: 1513 ISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLRARLANGL 1662
Score = 139 bits (298), Expect = 8e-032
Identities = 71/109 (65%), Positives = 76/109 (69%)
Frame = -3 / -3
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P ASLAL+SFL I PDG LG++SVK TL I L* TT TNCLISSS E T AT
Sbjct: 1658 PFASLALRSFLNIFPDGALGIESVKNTLLILL*NTTCFDTNCLISSSDIFESFDLTTNAT 1479
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSF+ TTA SLISG MR SSSAG T PLYLM S +LSTMK
Sbjct: 1478 GTSPASSSFMATTATSLISG*PMRRDSSSAGAT*NPLYLMSSFNLSTMK 1332
>emb|AX505882.1| Sequence 577 from Patent WO0216655
Length = 1671
Score = 199 bits (430), Expect = 5e-050
Identities = 83/110 (75%), Positives = 100/110 (90%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELE+LLI HPEI D AVV+M ++ AGE+PVAF+VR++ S
Sbjct: 1333 FIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVAMKEEDAGEVPVAFVVRSKDSN 1512
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++EDEIKQFV+K+VVFYK+I+KVFFT+SIPK PSGKILRKDLRARLA G+
Sbjct: 1513 ISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLRARLANGL 1662
Score = 139 bits (298), Expect = 8e-032
Identities = 71/109 (65%), Positives = 76/109 (69%)
Frame = -3 / -2
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P ASLAL+SFL I PDG LG++SVK TL I L* TT TNCLISSS E T AT
Sbjct: 1658 PFASLALRSFLNIFPDGALGIESVKNTLLILL*NTTCFDTNCLISSSDIFESFDLTTNAT 1479
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSF+ TTA SLISG MR SSSAG T PLYLM S +LSTMK
Sbjct: 1478 GTSPASSSFMATTATSLISG*PMRRDSSSAGAT*NPLYLMSSFNLSTMK 1332
>gb|AY376728.1| Arabidopsis thaliana 4-coumarate CoA ligase isoform 2 mRNA, complete
cds
Length = 1671
Score = 199 bits (430), Expect = 5e-050
Identities = 83/110 (75%), Positives = 100/110 (90%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELE+LLI HPEI D AVV+M ++ AGE+PVAF+VR++ S
Sbjct: 1333 FIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVAMKEEDAGEVPVAFVVRSKDSN 1512
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++EDEIKQFV+K+VVFYK+I+KVFFT+SIPK PSGKILRKDLRARLA G+
Sbjct: 1513 ISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLRARLANGL 1662
Score = 139 bits (298), Expect = 8e-032
Identities = 71/109 (65%), Positives = 76/109 (69%)
Frame = -3 / -2
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P ASLAL+SFL I PDG LG++SVK TL I L* TT TNCLISSS E T AT
Sbjct: 1658 PFASLALRSFLNIFPDGALGIESVKNTLLILL*NTTCFDTNCLISSSDIFESFDLTTNAT 1479
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSF+ TTA SLISG MR SSSAG T PLYLM S +LSTMK
Sbjct: 1478 GTSPASSSFMATTATSLISG*PMRRDSSSAGAT*NPLYLMSSFNLSTMK 1332
>ref|NM_113019.2| Arabidopsis thaliana 4CL2; 4-coumarate-CoA ligase AT3G21240 (4CL2)
mRNA, complete cds
Length = 1957
Score = 199 bits (430), Expect = 5e-050
Identities = 83/110 (75%), Positives = 100/110 (90%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELE+LLI HPEI D AVV+M ++ AGE+PVAF+VR++ S
Sbjct: 1398 FIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVAMKEEDAGEVPVAFVVRSKDSN 1577
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++EDEIKQFV+K+VVFYK+I+KVFFT+SIPK PSGKILRKDLRARLA G+
Sbjct: 1578 ISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLRARLANGL 1727
Score = 139 bits (298), Expect = 8e-032
Identities = 71/109 (65%), Positives = 76/109 (69%)
Frame = -3 / -1
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P ASLAL+SFL I PDG LG++SVK TL I L* TT TNCLISSS E T AT
Sbjct: 1723 PFASLALRSFLNIFPDGALGIESVKNTLLILL*NTTCFDTNCLISSSDIFESFDLTTNAT 1544
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSF+ TTA SLISG MR SSSAG T PLYLM S +LSTMK
Sbjct: 1543 GTSPASSSFMATTATSLISG*PMRRDSSSAGAT*NPLYLMSSFNLSTMK 1397
>gb|U18675.1|ATU18675 Arabidopsis thaliana 4-coumarate--coenzyme A ligase (At4CL1) mRNA,
complete cds
Length = 1869
Score = 197 bits (425), Expect = 2e-049
Identities = 80/110 (72%), Positives = 101/110 (91%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELEALLI HP+I D AVV+M ++ AGE+PVAF+V+++ S+
Sbjct: 1359 FIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSE 1538
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++ED++KQFV+K+VVFYK+I+KVFFTESIPK PSGKILRKDLRA+LA G+
Sbjct: 1539 LSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLRAKLANGL 1688
Score = 133 bits (286), Expect = 4e-030
Identities = 68/109 (62%), Positives = 73/109 (66%)
Frame = -3 / -3
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P AS AL+SFL I PDG LGMDSVK TL I L* TT TNC SSS E T AT
Sbjct: 1684 PFASFALRSFLNIFPDGALGMDSVKNTLLILL*NTTCFDTNCFTSSSDNSESFDFTTNAT 1505
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSFI TTA S++SG M ASSSAG T KPLYL+ S + STMK
Sbjct: 1504 GTSPAASSFIATTATSVMSG*PMSKASSSAGAT*KPLYLISSFNRSTMK 1358
>gb|AY099747.1| Arabidopsis thaliana 4-coumarate:CoA ligase 1 (At1g51680) mRNA,
complete cds
Length = 2029
Score = 197 bits (425), Expect = 2e-049
Identities = 80/110 (72%), Positives = 101/110 (91%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELEALLI HP+I D AVV+M ++ AGE+PVAF+V+++ S+
Sbjct: 1442 FIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSE 1621
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++ED++KQFV+K+VVFYK+I+KVFFTESIPK PSGKILRKDLRA+LA G+
Sbjct: 1622 LSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLRAKLANGL 1771
Score = 133 bits (286), Expect = 4e-030
Identities = 68/109 (62%), Positives = 73/109 (66%)
Frame = -3 / -2
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P AS AL+SFL I PDG LGMDSVK TL I L* TT TNC SSS E T AT
Sbjct: 1767 PFASFALRSFLNIFPDGALGMDSVKNTLLILL*NTTCFDTNCFTSSSDNSESFDFTTNAT 1588
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSFI TTA S++SG M ASSSAG T KPLYL+ S + STMK
Sbjct: 1587 GTSPAASSFIATTATSVMSG*PMSKASSSAGAT*KPLYLISSFNRSTMK 1441
>emb|AX505869.1| Sequence 564 from Patent WO0216655
Length = 1686
Score = 197 bits (425), Expect = 2e-049
Identities = 80/110 (72%), Positives = 101/110 (91%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELEALLI HP+I D AVV+M ++ AGE+PVAF+V+++ S+
Sbjct: 1354 FIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSE 1533
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++ED++KQFV+K+VVFYK+I+KVFFTESIPK PSGKILRKDLRA+LA G+
Sbjct: 1534 LSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLRAKLANGL 1683
Score = 133 bits (286), Expect = 4e-030
Identities = 68/109 (62%), Positives = 73/109 (66%)
Frame = -3 / -2
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P AS AL+SFL I PDG LGMDSVK TL I L* TT TNC SSS E T AT
Sbjct: 1679 PFASFALRSFLNIFPDGALGMDSVKNTLLILL*NTTCFDTNCFTSSSDNSESFDFTTNAT 1500
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSFI TTA S++SG M ASSSAG T KPLYL+ S + STMK
Sbjct: 1499 GTSPAASSFIATTATSVMSG*PMSKASSSAGAT*KPLYLISSFNRSTMK 1353
>gb|AY376729.1| Arabidopsis thaliana 4-coumarate CoA ligase isoform 1 mRNA, complete
cds
Length = 1686
Score = 197 bits (425), Expect = 2e-049
Identities = 80/110 (72%), Positives = 101/110 (91%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELEALLI HP+I D AVV+M ++ AGE+PVAF+V+++ S+
Sbjct: 1354 FIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSE 1533
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++ED++KQFV+K+VVFYK+I+KVFFTESIPK PSGKILRKDLRA+LA G+
Sbjct: 1534 LSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLRAKLANGL 1683
Score = 133 bits (286), Expect = 4e-030
Identities = 68/109 (62%), Positives = 73/109 (66%)
Frame = -3 / -2
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P AS AL+SFL I PDG LGMDSVK TL I L* TT TNC SSS E T AT
Sbjct: 1679 PFASFALRSFLNIFPDGALGMDSVKNTLLILL*NTTCFDTNCFTSSSDNSESFDFTTNAT 1500
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSFI TTA S++SG M ASSSAG T KPLYL+ S + STMK
Sbjct: 1499 GTSPAASSFIATTATSVMSG*PMSKASSSAGAT*KPLYLISSFNRSTMK 1353
>emb|BX822773.1|CNS0A78O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB63ZD09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1922
Score = 197 bits (425), Expect = 2e-049
Identities = 82/110 (74%), Positives = 99/110 (90%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELE+LL HPEI D AVV+M ++ AGE+PVAF+VR++ S
Sbjct: 1394 FIVDRLKELIKYKGFQVAPAELESLLKNHPEINDVAVVAMKEEDAGEVPVAFVVRSKDSN 1573
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++EDEIKQFV+K+VVFYK+I+KVFFT+SIPK PSGKILRKDLRARLA G+
Sbjct: 1574 ISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLRARLANGL 1723
Score = 138 bits (296), Expect = 2e-031
Identities = 70/109 (64%), Positives = 76/109 (69%)
Frame = -3 / -3
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P ASLAL+SFL I PDG LG++SVK TL I L* TT TNCLISSS E T AT
Sbjct: 1719 PFASLALRSFLNIFPDGALGIESVKNTLLILL*NTTCFDTNCLISSSDIFESFDLTTNAT 1540
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSF+ TTA SLISG +R SSSAG T PLYLM S +LSTMK
Sbjct: 1539 GTSPASSSFMATTATSLISG*FLRRDSSSAGAT*NPLYLMSSFNLSTMK 1393
>ref|NM_104046.2| Arabidopsis thaliana 4CL1 (4-COUMARATE:COA LIGASE 1); 4-coumarate-CoA
ligase AT1G51680 (4CL1) transcript variant AT1G51680.1
mRNA, complete cds
Length = 2029
Score = 197 bits (425), Expect = 2e-049
Identities = 80/110 (72%), Positives = 101/110 (91%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELEALLI HP+I D AVV+M ++ AGE+PVAF+V+++ S+
Sbjct: 1442 FIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSE 1621
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++ED++KQFV+K+VVFYK+I+KVFFTESIPK PSGKILRKDLRA+LA G+
Sbjct: 1622 LSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLRAKLANGL 1771
Score = 133 bits (286), Expect = 4e-030
Identities = 68/109 (62%), Positives = 73/109 (66%)
Frame = -3 / -2
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P AS AL+SFL I PDG LGMDSVK TL I L* TT TNC SSS E T AT
Sbjct: 1767 PFASFALRSFLNIFPDGALGMDSVKNTLLILL*NTTCFDTNCFTSSSDNSESFDFTTNAT 1588
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSFI TTA S++SG M ASSSAG T KPLYL+ S + STMK
Sbjct: 1587 GTSPAASSFIATTATSVMSG*PMSKASSSAGAT*KPLYLISSFNRSTMK 1441
>gb|BX836070.1|BX836070 BX836070 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH4ZD09 3PRIM, mRNA
sequence
Length = 776
Score = 196 bits (422), Expect = 6e-049
Identities = 79/110 (71%), Positives = 101/110 (91%)
Frame = +2 / -2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELEALLI HP+I D AVV+M ++ AGE+PVAF+V+++ S+
Sbjct: 547 FIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSE 368
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++ED++KQFV+K++VFYK+I+KVFFTESIPK PSGKILRKDLRA+LA G+
Sbjct: 367 LSEDDVKQFVSKQLVFYKRINKVFFTESIPKAPSGKILRKDLRAKLANGL 218
Score = 134 bits (287), Expect = 3e-030
Identities = 68/109 (62%), Positives = 74/109 (67%)
Frame = -3 / +3
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P AS AL+SFL I PDG LGMDSVK TL I L*KT+ TNC SSS E T AT
Sbjct: 222 PFASFALRSFLNIFPDGALGMDSVKNTLLILL*KTSCFDTNCFTSSSDNSESFDFTTNAT 401
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSFI TTA S++SG M ASSSAG T KPLYL+ S + STMK
Sbjct: 402 GTSPAASSFIATTATSVMSG*PMSKASSSAGAT*KPLYLISSFNRSTMK 548
>emb|BX815525.1|CNS0AE0I Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS6ZD02 of Adult vegetative tissue of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1998
Score = 196 bits (422), Expect = 6e-049
Identities = 79/110 (71%), Positives = 101/110 (91%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELEALLI HP+I D AVV+M ++ AGE+PVAF+V+++ S+
Sbjct: 1430 FIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSE 1609
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++ED++KQFV+K+VVFYK+I+KVFFTESIPK PSGKILRKDL+A+LA G+
Sbjct: 1610 LSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLKAKLANGL 1759
Score = 132 bits (282), Expect = 1e-029
Identities = 67/109 (61%), Positives = 72/109 (66%)
Frame = -3 / -1
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P AS A +SFL I PDG LGMDSVK TL I L* TT TNC SSS E T AT
Sbjct: 1755 PFASFAFRSFLNIFPDGALGMDSVKNTLLILL*NTTCFDTNCFTSSSDNSESFDFTTNAT 1576
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSFI TTA S++SG M ASSSAG T KPLYL+ S + STMK
Sbjct: 1575 GTSPAASSFIATTATSVMSG*PMSKASSSAGAT*KPLYLISSFNRSTMK 1429
>gb|AV802214.1|AV802214 AV802214 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-31-C01 3',
mRNA sequence
Length = 408
Score = 193 bits (415), Expect = 6e-048
Identities = 75/106 (70%), Positives = 96/106 (90%)
Frame = +2 / -3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KGFQVPPAELE+LLI H I DAAVV ND++AGE+PVAF+VR+ G+
Sbjct: 379 FIVDRLKEVIKFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGND 200
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TE+++K++VAK+VVFYK++HKVFF SIPK+PSGKILRKDL+A+L
Sbjct: 199 ITEEDVKEYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAKL 62
Score = 126 bits (269), Expect = 8e-028
Identities = 67/106 (63%), Positives = 73/106 (68%)
Frame = -3 / +3
Query: 318 SLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGIS 139
SLAL+SFL I P+G LGM++ KKTL L* TT LAT L SSSV P RT KATG S
Sbjct: 63 SLALRSFLSIFPEGDLGMEATKKTLCNLL*NTTCLATYSLTSSSVISFPFDRTTKATGTS 242
Query: 138 PARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
PA SSF TTAAS I ++ SSSAGGT KPL LM SLS STMK
Sbjct: 243 PATSSFCGTTAASAIEW*LISKLSSSAGGT*KPLNLMTSLSRSTMK 380
>gb|AF106088.1|AF106088 Arabidopsis thaliana 4-coumarate:CoA ligase 3 mRNA, complete cds
Length = 1873
Score = 193 bits (415), Expect = 6e-048
Identities = 75/106 (70%), Positives = 96/106 (90%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KGFQVPPAELE+LLI H I DAAVV ND++AGE+PVAF+VR+ G+
Sbjct: 1401 FIVDRLKEVIKFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGND 1580
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TE+++K++VAK+VVFYK++HKVFF SIPK+PSGKILRKDL+A+L
Sbjct: 1581 ITEEDVKEYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAKL 1718
Score = 126 bits (269), Expect = 8e-028
Identities = 67/106 (63%), Positives = 73/106 (68%)
Frame = -3 / -1
Query: 318 SLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGIS 139
SLAL+SFL I P+G LGM++ KKTL L* TT LAT L SSSV P RT KATG S
Sbjct: 1717 SLALRSFLSIFPEGDLGMEATKKTLCNLL*NTTCLATYSLTSSSVISFPFDRTTKATGTS 1538
Query: 138 PARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
PA SSF TTAAS I ++ SSSAGGT KPL LM SLS STMK
Sbjct: 1537 PATSSFCGTTAASAIEW*LISKLSSSAGGT*KPLNLMTSLSRSTMK 1400
>gb|AY058083.1| Arabidopsis thaliana At1g65060/F16G16_6 mRNA, complete cds
Length = 892
Score = 193 bits (415), Expect = 6e-048
Identities = 75/106 (70%), Positives = 96/106 (90%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KGFQVPPAELE+LLI H I DAAVV ND++AGE+PVAF+VR+ G+
Sbjct: 514 FIVDRLKEVIKFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGND 693
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TE+++K++VAK+VVFYK++HKVFF SIPK+PSGKILRKDL+A+L
Sbjct: 694 ITEEDVKEYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAKL 831
Score = 126 bits (269), Expect = 8e-028
Identities = 67/106 (63%), Positives = 73/106 (68%)
Frame = -3 / -3
Query: 318 SLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGIS 139
SLAL+SFL I P+G LGM++ KKTL L* TT LAT L SSSV P RT KATG S
Sbjct: 830 SLALRSFLSIFPEGDLGMEATKKTLCNLL*NTTCLATYSLTSSSVISFPFDRTTKATGTS 651
Query: 138 PARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
PA SSF TTAAS I ++ SSSAGGT KPL LM SLS STMK
Sbjct: 650 PATSSFCGTTAASAIEW*LISKLSSSAGGT*KPLNLMTSLSRSTMK 513
>gb|AY090306.1| Arabidopsis thaliana At1g65060/F16G16_6 mRNA, complete cds
Length = 612
Score = 193 bits (415), Expect = 6e-048
Identities = 75/106 (70%), Positives = 96/106 (90%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KGFQVPPAELE+LLI H I DAAVV ND++AGE+PVAF+VR+ G+
Sbjct: 289 FIVDRLKEVIKFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGND 468
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TE+++K++VAK+VVFYK++HKVFF SIPK+PSGKILRKDL+A+L
Sbjct: 469 ITEEDVKEYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAKL 606
Score = 126 bits (269), Expect = 8e-028
Identities = 67/106 (63%), Positives = 73/106 (68%)
Frame = -3 / -2
Query: 318 SLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGIS 139
SLAL+SFL I P+G LGM++ KKTL L* TT LAT L SSSV P RT KATG S
Sbjct: 605 SLALRSFLSIFPEGDLGMEATKKTLCNLL*NTTCLATYSLTSSSVISFPFDRTTKATGTS 426
Query: 138 PARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
PA SSF TTAAS I ++ SSSAGGT KPL LM SLS STMK
Sbjct: 425 PATSSFCGTTAASAIEW*LISKLSSSAGGT*KPLNLMTSLSRSTMK 288
>emb|AX412572.1| Sequence 336 from Patent WO0222675
Length = 1686
Score = 193 bits (415), Expect = 6e-048
Identities = 75/106 (70%), Positives = 96/106 (90%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KGFQVPPAELE+LLI H I DAAVV ND++AGE+PVAF+VR+ G+
Sbjct: 1363 FIVDRLKEVIKFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGND 1542
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TE+++K++VAK+VVFYK++HKVFF SIPK+PSGKILRKDL+A+L
Sbjct: 1543 ITEEDVKEYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAKL 1680
Score = 126 bits (269), Expect = 8e-028
Identities = 67/106 (63%), Positives = 73/106 (68%)
Frame = -3 / -2
Query: 318 SLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGIS 139
SLAL+SFL I P+G LGM++ KKTL L* TT LAT L SSSV P RT KATG S
Sbjct: 1679 SLALRSFLSIFPEGDLGMEATKKTLCNLL*NTTCLATYSLTSSSVISFPFDRTTKATGTS 1500
Query: 138 PARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
PA SSF TTAAS I ++ SSSAGGT KPL LM SLS STMK
Sbjct: 1499 PATSSFCGTTAASAIEW*LISKLSSSAGGT*KPLNLMTSLSRSTMK 1362
>emb|AX506095.1| Sequence 790 from Patent WO0216655
Length = 1686
Score = 193 bits (415), Expect = 6e-048
Identities = 75/106 (70%), Positives = 96/106 (90%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KGFQVPPAELE+LLI H I DAAVV ND++AGE+PVAF+VR+ G+
Sbjct: 1363 FIVDRLKEVIKFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGND 1542
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TE+++K++VAK+VVFYK++HKVFF SIPK+PSGKILRKDL+A+L
Sbjct: 1543 ITEEDVKEYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAKL 1680
Score = 126 bits (269), Expect = 8e-028
Identities = 67/106 (63%), Positives = 73/106 (68%)
Frame = -3 / -2
Query: 318 SLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGIS 139
SLAL+SFL I P+G LGM++ KKTL L* TT LAT L SSSV P RT KATG S
Sbjct: 1679 SLALRSFLSIFPEGDLGMEATKKTLCNLL*NTTCLATYSLTSSSVISFPFDRTTKATGTS 1500
Query: 138 PARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
PA SSF TTAAS I ++ SSSAGGT KPL LM SLS STMK
Sbjct: 1499 PATSSFCGTTAASAIEW*LISKLSSSAGGT*KPLNLMTSLSRSTMK 1362
>gb|AY376730.1| Arabidopsis thaliana 4-coumarate CoA ligase isoform 3 mRNA, complete
cds
Length = 1686
Score = 193 bits (415), Expect = 6e-048
Identities = 75/106 (70%), Positives = 96/106 (90%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KGFQVPPAELE+LLI H I DAAVV ND++AGE+PVAF+VR+ G+
Sbjct: 1363 FIVDRLKEVIKFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGND 1542
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TE+++K++VAK+VVFYK++HKVFF SIPK+PSGKILRKDL+A+L
Sbjct: 1543 ITEEDVKEYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAKL 1680
Score = 126 bits (269), Expect = 8e-028
Identities = 67/106 (63%), Positives = 73/106 (68%)
Frame = -3 / -2
Query: 318 SLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGIS 139
SLAL+SFL I P+G LGM++ KKTL L* TT LAT L SSSV P RT KATG S
Sbjct: 1679 SLALRSFLSIFPEGDLGMEATKKTLCNLL*NTTCLATYSLTSSSVISFPFDRTTKATGTS 1500
Query: 138 PARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
PA SSF TTAAS I ++ SSSAGGT KPL LM SLS STMK
Sbjct: 1499 PATSSFCGTTAASAIEW*LISKLSSSAGGT*KPLNLMTSLSRSTMK 1362
>ref|NM_105180.2| Arabidopsis thaliana 4CL3; 4-coumarate-CoA ligase AT1G65060 (4CL3)
transcript variant AT1G65060.1 mRNA, complete cds
Length = 1889
Score = 193 bits (415), Expect = 6e-048
Identities = 75/106 (70%), Positives = 96/106 (90%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KGFQVPPAELE+LLI H I DAAVV ND++AGE+PVAF+VR+ G+
Sbjct: 1408 FIVDRLKEVIKFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGND 1587
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TE+++K++VAK+VVFYK++HKVFF SIPK+PSGKILRKDL+A+L
Sbjct: 1588 ITEEDVKEYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAKL 1725
Score = 126 bits (269), Expect = 8e-028
Identities = 67/106 (63%), Positives = 73/106 (68%)
Frame = -3 / -1
Query: 318 SLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGIS 139
SLAL+SFL I P+G LGM++ KKTL L* TT LAT L SSSV P RT KATG S
Sbjct: 1724 SLALRSFLSIFPEGDLGMEATKKTLCNLL*NTTCLATYSLTSSSVISFPFDRTTKATGTS 1545
Query: 138 PARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
PA SSF TTAAS I ++ SSSAGGT KPL LM SLS STMK
Sbjct: 1544 PATSSFCGTTAASAIEW*LISKLSSSAGGT*KPLNLMTSLSRSTMK 1407
>gb|AV558658.1|AV558658 AV558658 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ103f10F 3', mRNA sequence
Length = 416
Score = 177 bits (381), Expect = 3e-043
Identities = 68/99 (68%), Positives = 89/99 (89%)
Frame = +2 / -1
Query: 23 EIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDEIK 202
E+IK+KGFQVPPAELE+LLI H I DAAVV ND++AGE+PVAF+VR+ G+ +TE+++K
Sbjct: 416 EVIKFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVK 237
Query: 203 QFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
++VAK+VVFYK++HKVFF SIPK+PSGKILRKDL+A+L
Sbjct: 236 EYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAKL 120
Score = 113 bits (241), Expect = 6e-024
Identities = 60/97 (61%), Positives = 66/97 (68%)
Frame = -3 / +1
Query: 318 SLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGIS 139
SLAL+SFL I P+G LGM++ KKTL L* TT LAT L SSSV P RT KATG S
Sbjct: 121 SLALRSFLSIFPEGDLGMEATKKTLCNLL*NTTCLATYSLTSSSVISFPFDRTTKATGTS 300
Query: 138 PARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLM 28
PA SSF TTAAS I ++ SSSAGGT KPL LM
Sbjct: 301 PATSSFCGTTAASAIEW*LISKLSSSAGGT*KPLNLM 411
>ref|NM_179513.1| Arabidopsis thaliana 4CL3; 4-coumarate-CoA ligase AT1G65060 (4CL3)
transcript variant AT1G65060.2 mRNA, complete cds
Length = 2056
Score = 160 bits (344), Expect(2) = 3e-043
Identities = 62/91 (68%), Positives = 81/91 (89%)
Frame = +2 / +3
Query: 47 QVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVV 226
QVPPAELE+LLI H I DAAVV ND++AGE+PVAF+VR+ G+ +TE+++K++VAK+VV
Sbjct: 1620 QVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVV 1799
Query: 227 FYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
FYK++HKVFF SIPK+PSGKILRKDL+A+L
Sbjct: 1800 FYKRLHKVFFVASIPKSPSGKILRKDLKAKL 1892
Score = 104 bits (222), Expect(2) = 2e-022
Identities = 55/90 (61%), Positives = 61/90 (67%)
Frame = -3 / -1
Query: 318 SLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGIS 139
SLAL+SFL I P+G LGM++ KKTL L* TT LAT L SSSV P RT KATG S
Sbjct: 1891 SLALRSFLSIFPEGDLGMEATKKTLCNLL*NTTCLATYSLTSSSVISFPFDRTTKATGTS 1712
Query: 138 PARSSFIDTTAASLISGCVMRSASSSAGGT 49
PA SSF TTAAS I ++ SSSAGGT
Sbjct: 1711 PATSSFCGTTAASAIEW*LISKLSSSAGGT 1622
Score = 40.5 bits (82), Expect(2) = 3e-043
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPP 58
FIVDRLKE+IK+KGFQ P
Sbjct: 1408 FIVDRLKEVIKFKGFQASP 1464
Score = 26.3 bits (51), Expect(2) = 2e-022
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3 / -3
Query: 45 KPLYLMISLSLSTMK 1
KPL LM SLS STMK
Sbjct: 1451 KPLNLMTSLSRSTMK 1407
>gb|AY095992.1| Arabidopsis thaliana AT3g21230/MXL8_9 mRNA, complete cds
Length = 1824
Score = 177 bits (380), Expect = 4e-043
Identities = 73/106 (68%), Positives = 91/106 (85%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KG+QV PAELEALLI+HP I DAAVV+M D++A E+PVAF+ R++GSQ
Sbjct: 1302 FIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQGSQ 1481
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TED++K +V K+VV YK+I VFF E IPK SGKILRKDLRA+L
Sbjct: 1482 LTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDLRAKL 1619
Score = 107 bits (228), Expect = 4e-022
Identities = 59/107 (55%), Positives = 71/107 (66%)
Frame = -3 / -3
Query: 321 ASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGI 142
++LA +SFLRILP+ G+ S+K T+ I L* TT L T L SSSV *+P ATG
Sbjct: 1621 SNLARRSFLRILPETAFGITSMKNTILIRL**TTCLFT*LLTSSSVN*DP*DLATNATGT 1442
Query: 141 SPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
S A SSFI TTAAS I G + +ASSSAG TW PL L+ S + STMK
Sbjct: 1441 SSATSSFIATTAASSIEG*EISNASSSAGATW*PLNLISSFNRSTMK 1301
>gb|BT000614.1| Arabidopsis thaliana putative 4-coumarate:CoA ligase 2
(At3g21230/MXL8_9) mRNA, complete cds
Length = 1467
Score = 177 bits (380), Expect = 4e-043
Identities = 73/106 (68%), Positives = 91/106 (85%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KG+QV PAELEALLI+HP I DAAVV+M D++A E+PVAF+ R++GSQ
Sbjct: 1129 FIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQGSQ 1308
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TED++K +V K+VV YK+I VFF E IPK SGKILRKDLRA+L
Sbjct: 1309 LTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDLRAKL 1446
Score = 107 bits (228), Expect = 4e-022
Identities = 59/107 (55%), Positives = 71/107 (66%)
Frame = -3 / -2
Query: 321 ASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGI 142
++LA +SFLRILP+ G+ S+K T+ I L* TT L T L SSSV *+P ATG
Sbjct: 1448 SNLARRSFLRILPETAFGITSMKNTILIRL**TTCLFT*LLTSSSVN*DP*DLATNATGT 1269
Query: 141 SPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
S A SSFI TTAAS I G + +ASSSAG TW PL L+ S + STMK
Sbjct: 1268 SSATSSFIATTAASSIEG*EISNASSSAGATW*PLNLISSFNRSTMK 1128
>gb|AY250837.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At3g21230)
mRNA, complete cds
Length = 1713
Score = 177 bits (380), Expect = 4e-043
Identities = 73/106 (68%), Positives = 91/106 (85%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KG+QV PAELEALLI+HP I DAAVV+M D++A E+PVAF+ R++GSQ
Sbjct: 1375 FIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQGSQ 1554
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TED++K +V K+VV YK+I VFF E IPK SGKILRKDLRA+L
Sbjct: 1555 LTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDLRAKL 1692
Score = 107 bits (228), Expect = 4e-022
Identities = 59/107 (55%), Positives = 71/107 (66%)
Frame = -3 / -2
Query: 321 ASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGI 142
++LA +SFLRILP+ G+ S+K T+ I L* TT L T L SSSV *+P ATG
Sbjct: 1694 SNLARRSFLRILPETAFGITSMKNTILIRL**TTCLFT*LLTSSSVN*DP*DLATNATGT 1515
Query: 141 SPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
S A SSFI TTAAS I G + +ASSSAG TW PL L+ S + STMK
Sbjct: 1514 SSATSSFIATTAASSIEG*EISNASSSAGATW*PLNLISSFNRSTMK 1374
>gb|AY376732.1| Arabidopsis thaliana 4-coumarate CoA ligase isoform 5 mRNA, complete
cds
Length = 1713
Score = 177 bits (380), Expect = 4e-043
Identities = 73/106 (68%), Positives = 91/106 (85%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KG+QV PAELEALLI+HP I DAAVV+M D++A E+PVAF+ R++GSQ
Sbjct: 1375 FIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQGSQ 1554
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TED++K +V K+VV YK+I VFF E IPK SGKILRKDLRA+L
Sbjct: 1555 LTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDLRAKL 1692
Score = 107 bits (228), Expect = 4e-022
Identities = 59/107 (55%), Positives = 71/107 (66%)
Frame = -3 / -2
Query: 321 ASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGI 142
++LA +SFLRILP+ G+ S+K T+ I L* TT L T L SSSV *+P ATG
Sbjct: 1694 SNLARRSFLRILPETAFGITSMKNTILIRL**TTCLFT*LLTSSSVN*DP*DLATNATGT 1515
Query: 141 SPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
S A SSFI TTAAS I G + +ASSSAG TW PL L+ S + STMK
Sbjct: 1514 SSATSSFIATTAASSIEG*EISNASSSAGATW*PLNLISSFNRSTMK 1374
>emb|BX823716.1|CNS0A6KI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS6ZB09 of Adult vegetative tissue of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1839
Score = 177 bits (380), Expect = 4e-043
Identities = 73/106 (68%), Positives = 91/106 (85%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KG+QV PAELEALLI+HP I DAAVV+M D++A E+PVAF+ R++GSQ
Sbjct: 1425 FIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQGSQ 1604
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TED++K +V K+VV YK+I VFF E IPK SGKILRKDLRA+L
Sbjct: 1605 LTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDLRAKL 1742
Score = 107 bits (228), Expect = 4e-022
Identities = 59/107 (55%), Positives = 71/107 (66%)
Frame = -3 / -3
Query: 321 ASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGI 142
++LA +SFLRILP+ G+ S+K T+ I L* TT L T L SSSV *+P ATG
Sbjct: 1744 SNLARRSFLRILPETAFGITSMKNTILIRL**TTCLFT*LLTSSSVN*DP*DLATNATGT 1565
Query: 141 SPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
S A SSFI TTAAS I G + +ASSSAG TW PL L+ S + STMK
Sbjct: 1564 SSATSSFIATTAASSIEG*EISNASSSAGATW*PLNLISSFNRSTMK 1424
>emb|BX824168.1|CNS0A6ZK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH27ZG10 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1739
Score = 177 bits (380), Expect = 4e-043
Identities = 73/106 (68%), Positives = 91/106 (85%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KG+QV PAELEALLI+HP I DAAVV+M D++A E+PVAF+ R++GSQ
Sbjct: 1349 FIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQGSQ 1528
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TED++K +V K+VV YK+I VFF E IPK SGKILRKDLRA+L
Sbjct: 1529 LTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDLRAKL 1666
Score = 107 bits (228), Expect = 4e-022
Identities = 59/107 (55%), Positives = 71/107 (66%)
Frame = -3 / -3
Query: 321 ASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGI 142
++LA +SFLRILP+ G+ S+K T+ I L* TT L T L SSSV *+P ATG
Sbjct: 1668 SNLARRSFLRILPETAFGITSMKNTILIRL**TTCLFT*LLTSSSVN*DP*DLATNATGT 1489
Query: 141 SPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
S A SSFI TTAAS I G + +ASSSAG TW PL L+ S + STMK
Sbjct: 1488 SSATSSFIATTAASSIEG*EISNASSSAGATW*PLNLISSFNRSTMK 1348
>emb|BX824573.1|CNS0A6WB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH57ZD12 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1796
Score = 177 bits (380), Expect = 4e-043
Identities = 73/106 (68%), Positives = 91/106 (85%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KG+QV PAELEALLI+HP I DAAVV+M D++A E+PVAF+ R++GSQ
Sbjct: 1411 FIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQGSQ 1590
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TED++K +V K+VV YK+I VFF E IPK SGKILRKDLRA+L
Sbjct: 1591 LTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDLRAKL 1728
Score = 107 bits (228), Expect = 4e-022
Identities = 59/107 (55%), Positives = 71/107 (66%)
Frame = -3 / -1
Query: 321 ASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGI 142
++LA +SFLRILP+ G+ S+K T+ I L* TT L T L SSSV *+P ATG
Sbjct: 1730 SNLARRSFLRILPETAFGITSMKNTILIRL**TTCLFT*LLTSSSVN*DP*DLATNATGT 1551
Query: 141 SPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
S A SSFI TTAAS I G + +ASSSAG TW PL L+ S + STMK
Sbjct: 1550 SSATSSFIATTAASSIEG*EISNASSSAGATW*PLNLISSFNRSTMK 1410
>emb|BX824596.1|CNS0A6SI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH59ZC05 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1952
Score = 177 bits (380), Expect = 4e-043
Identities = 73/106 (68%), Positives = 91/106 (85%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KG+QV PAELEALLI+HP I DAAVV+M D++A E+PVAF+ R++GSQ
Sbjct: 1420 FIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQGSQ 1599
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TED++K +V K+VV YK+I VFF E IPK SGKILRKDLRA+L
Sbjct: 1600 LTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDLRAKL 1737
Score = 107 bits (228), Expect = 4e-022
Identities = 59/107 (55%), Positives = 71/107 (66%)
Frame = -3 / -1
Query: 321 ASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGI 142
++LA +SFLRILP+ G+ S+K T+ I L* TT L T L SSSV *+P ATG
Sbjct: 1739 SNLARRSFLRILPETAFGITSMKNTILIRL**TTCLFT*LLTSSSVN*DP*DLATNATGT 1560
Query: 141 SPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
S A SSFI TTAAS I G + +ASSSAG TW PL L+ S + STMK
Sbjct: 1559 SSATSSFIATTAASSIEG*EISNASSSAGATW*PLNLISSFNRSTMK 1419
>emb|BX822898.1|CNS0A75P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB70ZH05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1669
Score = 177 bits (380), Expect = 4e-043
Identities = 73/106 (68%), Positives = 91/106 (85%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KG+QV PAELEALLI+HP I DAAVV+M D++A E+PVAF+ R++GSQ
Sbjct: 1286 FIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQGSQ 1465
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TED++K +V K+VV YK+I VFF E IPK SGKILRKDLRA+L
Sbjct: 1466 LTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDLRAKL 1603
Score = 107 bits (228), Expect = 4e-022
Identities = 59/107 (55%), Positives = 71/107 (66%)
Frame = -3 / -2
Query: 321 ASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGI 142
++LA +SFLRILP+ G+ S+K T+ I L* TT L T L SSSV *+P ATG
Sbjct: 1605 SNLARRSFLRILPETAFGITSMKNTILIRL**TTCLFT*LLTSSSVN*DP*DLATNATGT 1426
Query: 141 SPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
S A SSFI TTAAS I G + +ASSSAG TW PL L+ S + STMK
Sbjct: 1425 SSATSSFIATTAASSIEG*EISNASSSAGATW*PLNLISSFNRSTMK 1285
>emb|BX823111.1|CNS0A76K Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB90ZE03 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1810
Score = 177 bits (380), Expect = 4e-043
Identities = 73/106 (68%), Positives = 91/106 (85%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KG+QV PAELEALLI+HP I DAAVV+M D++A E+PVAF+ R++GSQ
Sbjct: 1381 FIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQGSQ 1560
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TED++K +V K+VV YK+I VFF E IPK SGKILRKDLRA+L
Sbjct: 1561 LTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDLRAKL 1698
Score = 107 bits (228), Expect = 4e-022
Identities = 59/107 (55%), Positives = 71/107 (66%)
Frame = -3 / -3
Query: 321 ASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGI 142
++LA +SFLRILP+ G+ S+K T+ I L* TT L T L SSSV *+P ATG
Sbjct: 1700 SNLARRSFLRILPETAFGITSMKNTILIRL**TTCLFT*LLTSSSVN*DP*DLATNATGT 1521
Query: 141 SPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
S A SSFI TTAAS I G + +ASSSAG TW PL L+ S + STMK
Sbjct: 1520 SSATSSFIATTAASSIEG*EISNASSSAGATW*PLNLISSFNRSTMK 1380
>ref|NM_113018.3| Arabidopsis thaliana catalytic AT3G21230 mRNA, complete cds
Length = 1957
Score = 177 bits (380), Expect = 4e-043
Identities = 73/106 (68%), Positives = 91/106 (85%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KG+QV PAELEALLI+HP I DAAVV+M D++A E+PVAF+ R++GSQ
Sbjct: 1428 FIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQGSQ 1607
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
+TED++K +V K+VV YK+I VFF E IPK SGKILRKDLRA+L
Sbjct: 1608 LTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDLRAKL 1745
Score = 107 bits (228), Expect = 4e-022
Identities = 59/107 (55%), Positives = 71/107 (66%)
Frame = -3 / -1
Query: 321 ASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGI 142
++LA +SFLRILP+ G+ S+K T+ I L* TT L T L SSSV *+P ATG
Sbjct: 1747 SNLARRSFLRILPETAFGITSMKNTILIRL**TTCLFT*LLTSSSVN*DP*DLATNATGT 1568
Query: 141 SPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
S A SSFI TTAAS I G + +ASSSAG TW PL L+ S + STMK
Sbjct: 1567 SSATSSFIATTAASSIEG*EISNASSSAGATW*PLNLISSFNRSTMK 1427
>gb|AI999552.1|AI999552 701556371 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701556371, mRNA sequence
Length = 626
Score = 160 bits (344), Expect(2) = 6e-043
Identities = 62/91 (68%), Positives = 81/91 (89%)
Frame = +2 / -3
Query: 47 QVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVV 226
QVPPAELE+LLI H I DAAVV ND++AGE+PVAF+VR+ G+ +TE+++K++VAK+VV
Sbjct: 372 QVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVV 193
Query: 227 FYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
FYK++HKVFF SIPK+PSGKILRKDL+A+L
Sbjct: 192 FYKRLHKVFFVASIPKSPSGKILRKDLKAKL 100
Score = 104 bits (222), Expect(2) = 3e-022
Identities = 55/90 (61%), Positives = 61/90 (67%)
Frame = -3 / +2
Query: 318 SLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGIS 139
SLAL+SFL I P+G LGM++ KKTL L* TT LAT L SSSV P RT KATG S
Sbjct: 101 SLALRSFLSIFPEGDLGMEATKKTLCNLL*NTTCLATYSLTSSSVISFPFDRTTKATGTS 280
Query: 138 PARSSFIDTTAASLISGCVMRSASSSAGGT 49
PA SSF TTAAS I ++ SSSAGGT
Sbjct: 281 PATSSFCGTTAASAIEW*LISKLSSSAGGT 370
Score = 37.7 bits (76), Expect(2) = 6e-043
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2 / -1
Query: 5 IVDRLKEIIKYKGFQVPP 58
IVDRLKE+IK+KGFQ P
Sbjct: 581 IVDRLKEVIKFKGFQASP 528
Score = 24.0 bits (46), Expect(2) = 3e-022
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / +1
Query: 45 KPLYLMISLSLSTM 4
KPL LM SLS STM
Sbjct: 541 KPLNLMTSLSRSTM 582
>emb|BX814606.1|CNS0ADL5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB84ZC05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1727
Score = 164 bits (353), Expect(2) = 8e-042
Identities = 63/92 (68%), Positives = 82/92 (89%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IK+KGFQVPPAELE+LLI H I DAAVV ND++AGE+PVAF+VR+ G+
Sbjct: 1368 FIVDRLKEVIKFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGND 1547
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKN 277
+TE+++K++VAK+VVFYK++HKVFF SIPK+
Sbjct: 1548 ITEEDVKEYVAKQVVFYKRLHKVFFVASIPKS 1643
Score = 104 bits (222), Expect(2) = 2e-022
Identities = 57/91 (62%), Positives = 61/91 (67%)
Frame = -3 / -2
Query: 273 LGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGISPARSSFIDTTAASLI 94
LGM++ KKTL L* TT LAT L SSSV P RT KATG SPA SSF TTAAS I
Sbjct: 1639 LGMEATKKTLCNLL*NTTCLATYSLTSSSVISFPFDRTTKATGTSPATSSFCGTTAASAI 1460
Query: 93 SGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
++ SSSAGGT KPL LM SLS STMK
Sbjct: 1459 EW*LISKLSSSAGGT*KPLNLMTSLSRSTMK 1367
Score = 28.1 bits (55), Expect(2) = 8e-042
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2 / +2
Query: 281 SGKILRKDLRARL 319
SGKILRKDL+A+L
Sbjct: 1646 SGKILRKDLKAKL 1684
Score = 23.1 bits (44), Expect(2) = 2e-022
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3 / -3
Query: 318 SLALKSFLRILPD 280
SLAL+SFL I P+
Sbjct: 1683 SLALRSFLSIFPE 1645
>gb|BP793536.1|BP793536 BP793536 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-56-K19 3',
mRNA sequence
Length = 409
Score = 171 bits (369), Expect = 1e-041
Identities = 66/96 (68%), Positives = 86/96 (89%)
Frame = +2 / -2
Query: 32 KYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDEIKQFV 211
K+KGFQVPPAELE+LLI H I DAAVV ND++AGE+PVAF+VR+ G+ +TE+++K++V
Sbjct: 408 KFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYV 229
Query: 212 AKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
AK+VVFYK++HKVFF SIPK+PSGKILRKDL+A+L
Sbjct: 228 AKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAKL 121
Score = 111 bits (236), Expect = 3e-023
Identities = 59/96 (61%), Positives = 65/96 (67%)
Frame = -3 / +2
Query: 318 SLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGIS 139
SLAL+SFL I P+G LGM++ KKTL L* TT LAT L SSSV P RT KATG S
Sbjct: 122 SLALRSFLSIFPEGDLGMEATKKTLCNLL*NTTCLATYSLTSSSVISFPFDRTTKATGTS 301
Query: 138 PARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYL 31
PA SSF TTAAS I ++ SSSAGGT KPL L
Sbjct: 302 PATSSFCGTTAASAIEW*LISKLSSSAGGT*KPLNL 409
>dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXL8
Length = 85599
Score = 76.7 bits (161), Expect(3) = 2e-041
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2 / -2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 118
FIVDRLKE+IKYKGFQV PAELE+LLI HPEI D AVV+
Sbjct: 36854 FIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVA 36738
Score = 75.3 bits (158), Expect(3) = 2e-034
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +2 / -3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 118
FIVDRLKE+IK+KG+QV PAELEALLI+HP I DAAVV+
Sbjct: 30547 FIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVA 30431
Score = 74.4 bits (156), Expect(3) = 2e-041
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +2 / -3
Query: 221 VVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
VVFYK+I+KVFFT+SIPK PSGKILRKDLRARLA G+
Sbjct: 36424 VVFYKRINKVFFTDSIPKAPSGKILRKDLRARLANGL 36314
Score = 58.3 bits (121), Expect(3) = 2e-041
Identities = 22/36 (61%), Positives = 32/36 (88%)
Frame = +2 / -1
Query: 116 SMNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEV 223
SM ++ AGE+PVAF+VR++ S ++EDEIKQFV+K+V
Sbjct: 36633 SMKEEDAGEVPVAFVVRSKDSNISEDEIKQFVSKQV 36526
Score = 56.5 bits (117), Expect(3) = 2e-034
Identities = 20/41 (48%), Positives = 32/41 (78%)
Frame = +2 / -1
Query: 101 DAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEV 223
D + M D++A E+PVAF+ R++GSQ+TED++K +V K+V
Sbjct: 30369 DI*IFRMKDEVADEVPVAFVARSQGSQLTEDDVKSYVNKQV 30247
Score = 55.1 bits (114), Expect(3) = 2e-023
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -3 / +3
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTT 220
P ASLAL+SFL I PDG LG++SVK TL I L* TT
Sbjct: 36318 PFASLALRSFLNIFPDGALGIESVKNTLLILL*NTT 36425
Score = 54.7 bits (113), Expect(3) = 2e-023
Identities = 27/38 (71%), Positives = 28/38 (73%)
Frame = -3 / +1
Query: 114 TTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
TTA SLISG MR SSSAG T PLYLM S +LSTMK
Sbjct: 36742 TTATSLISG*PMRRDSSSAGAT*NPLYLMSSFNLSTMK 36855
Score = 53.8 bits (111), Expect(3) = 2e-034
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2 / -2
Query: 221 VVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
VV YK+I VFF E IPK SGKILRKDLRA+L
Sbjct: 30158 VVHYKRIKMVFFIEVIPKAVSGKILRKDLRAKL 30060
Score = 38.6 bits (78), Expect(3) = 2e-023
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -3 / +2
Query: 222 TSLATNCLISSSVT*EPSVRTMKATGISPARSSFI 118
T TNCLISSS E T ATG SPA SSF+
Sbjct: 36527 TCFDTNCLISSSDIFESFDLTTNATGTSPASSSFM 36631
>gb|AF106085.1|AF106085 Arabidopsis thaliana 4-coumarate:CoA ligase 2 gene, complete cds
Length = 7906
Score = 76.7 bits (161), Expect(3) = 2e-041
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 118
FIVDRLKE+IKYKGFQV PAELE+LLI HPEI D AVV+
Sbjct: 3819 FIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVA 3935
Score = 74.4 bits (156), Expect(3) = 2e-041
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +2 / +1
Query: 221 VVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
VVFYK+I+KVFFT+SIPK PSGKILRKDLRARLA G+
Sbjct: 4249 VVFYKRINKVFFTDSIPKAPSGKILRKDLRARLANGL 4359
Score = 58.3 bits (121), Expect(3) = 2e-041
Identities = 22/36 (61%), Positives = 32/36 (88%)
Frame = +2 / +2
Query: 116 SMNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEV 223
SM ++ AGE+PVAF+VR++ S ++EDEIKQFV+K+V
Sbjct: 4040 SMKEEDAGEVPVAFVVRSKDSNISEDEIKQFVSKQV 4147
Score = 55.1 bits (114), Expect(3) = 2e-023
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -3 / -3
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTT 220
P ASLAL+SFL I PDG LG++SVK TL I L* TT
Sbjct: 4355 PFASLALRSFLNIFPDGALGIESVKNTLLILL*NTT 4248
Score = 54.7 bits (113), Expect(3) = 2e-023
Identities = 27/38 (71%), Positives = 28/38 (73%)
Frame = -3 / -1
Query: 114 TTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
TTA SLISG MR SSSAG T PLYLM S +LSTMK
Sbjct: 3931 TTATSLISG*PMRRDSSSAGAT*NPLYLMSSFNLSTMK 3818
Score = 38.6 bits (78), Expect(3) = 2e-023
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -3 / -2
Query: 222 TSLATNCLISSSVT*EPSVRTMKATGISPARSSFI 118
T TNCLISSS E T ATG SPA SSF+
Sbjct: 4146 TCFDTNCLISSSDIFESFDLTTNATGTSPASSSFM 4042
>gb|BX835589.1|BX835589 BX835589 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS94ZD09 3PRIM, mRNA
sequence
Length = 538
Score = 162 bits (348), Expect = 1e-038
Identities = 67/102 (65%), Positives = 82/102 (80%)
Frame = +2 / -2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
F+VDRLKE+IKYKG+QV PAELEALL+THPEI DAAV+ D G+ P+A++VR GS
Sbjct: 462 FVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSS 283
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
++E+ I +FVAK+V YK+I KV F SIPKNPSGKILRKDL
Sbjct: 282 LSENTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDL 157
>gb|AF106084.1|AF106084 Arabidopsis thaliana 4-coumarate:CoA ligase 1 gene, complete cds
Length = 3495
Score = 76.7 bits (161), Expect(3) = 1e-038
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = +2 / +1
Query: 206 FVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++ +VVFYK+I+KVFFTESIPK PSGKILRKDLRA+LA G+
Sbjct: 3331 YLKSQVVFYKRINKVFFTESIPKAPSGKILRKDLRAKLANGL 3456
Score = 76.2 bits (160), Expect(3) = 1e-038
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 118
FIVDRLKE+IKYKGFQV PAELEALLI HP+I D AVV+
Sbjct: 2700 FIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVA 2816
Score = 54.7 bits (113), Expect(3) = 1e-038
Identities = 18/35 (51%), Positives = 32/35 (91%)
Frame = +2 / +1
Query: 119 MNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEV 223
M ++ AGE+PVAF+V+++ S+++ED++KQFV+K+V
Sbjct: 3148 MKEEAAGEVPVAFVVKSKDSELSEDDVKQFVSKQV 3252
>gb|BX835847.1|BX835847 BX835847 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH42ZC01 3PRIM,
mRNA sequence
Length = 486
Score = 161 bits (346), Expect = 2e-038
Identities = 67/102 (65%), Positives = 81/102 (79%)
Frame = +2 / -2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
F+VDRLKE+IKYKG+QV PAELEALL+THPEI DAAV+ D G+ P+A++VR GS
Sbjct: 470 FVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSS 291
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
++E I +FVAK+V YK+I KV F SIPKNPSGKILRKDL
Sbjct: 290 LSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDL 165
>gb|BX836241.1|BX836241 BX836241 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH38ZD02 3PRIM,
mRNA sequence
Length = 877
Score = 161 bits (346), Expect = 2e-038
Identities = 67/102 (65%), Positives = 81/102 (79%)
Frame = +2 / -1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
F+VDRLKE+IKYKG+QV PAELEALL+THPEI DAAV+ D G+ P+A++VR GS
Sbjct: 484 FVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSS 305
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
++E I +FVAK+V YK+I KV F SIPKNPSGKILRKDL
Sbjct: 304 LSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDL 179
>gb|AF360250.1| Arabidopsis thaliana unknown protein (At1g20510) mRNA, complete cds
Length = 1856
Score = 161 bits (346), Expect = 2e-038
Identities = 67/102 (65%), Positives = 81/102 (79%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
F+VDRLKE+IKYKG+QV PAELEALL+THPEI DAAV+ D G+ P+A++VR GS
Sbjct: 1316 FVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSS 1495
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
++E I +FVAK+V YK+I KV F SIPKNPSGKILRKDL
Sbjct: 1496 LSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDL 1621
>gb|AY040047.1| Arabidopsis thaliana unknown protein (At1g20510) mRNA, complete cds
Length = 1641
Score = 161 bits (346), Expect = 2e-038
Identities = 67/102 (65%), Positives = 81/102 (79%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
F+VDRLKE+IKYKG+QV PAELEALL+THPEI DAAV+ D G+ P+A++VR GS
Sbjct: 1303 FVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSS 1482
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
++E I +FVAK+V YK+I KV F SIPKNPSGKILRKDL
Sbjct: 1483 LSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDL 1608
>gb|AY250838.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At1g20510)
mRNA, complete cds
Length = 1641
Score = 161 bits (346), Expect = 2e-038
Identities = 67/102 (65%), Positives = 81/102 (79%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
F+VDRLKE+IKYKG+QV PAELEALL+THPEI DAAV+ D G+ P+A++VR GS
Sbjct: 1303 FVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSS 1482
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
++E I +FVAK+V YK+I KV F SIPKNPSGKILRKDL
Sbjct: 1483 LSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDL 1608
>emb|BX814850.1|CNS0ACYK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS11ZB06 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 624
Score = 161 bits (346), Expect = 2e-038
Identities = 67/102 (65%), Positives = 81/102 (79%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
F+VDRLKE+IKYKG+QV PAELEALL+THPEI DAAV+ D G+ P+A++VR GS
Sbjct: 97 FVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSS 276
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
++E I +FVAK+V YK+I KV F SIPKNPSGKILRKDL
Sbjct: 277 LSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDL 402
>emb|BX814596.1|CNS0ADI2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB83ZF04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1832
Score = 161 bits (346), Expect = 2e-038
Identities = 67/102 (65%), Positives = 81/102 (79%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
F+VDRLKE+IKYKG+QV PAELEALL+THPEI DAAV+ D G+ P+A++VR GS
Sbjct: 1328 FVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSS 1507
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
++E I +FVAK+V YK+I KV F SIPKNPSGKILRKDL
Sbjct: 1508 LSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDL 1633
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,140,123,793
Number of Sequences: 1013581
Number of extensions: 15278693
Number of successful extensions: 215854
Number of sequences better than 1.0e-020: 133
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 38815633595
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)