TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950089.2.3
(824 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF652692.1|CF652692 71-L020135w-066-001-M17-SP6P MPIZ-AD... 206 7e-056
gb|AF141659.1| Arabidopsis thaliana AtHVA22a mRNA, complete... 206 7e-056
dbj|AK118825.1| Arabidopsis thaliana At1g74520 mRNA for put... 206 7e-056
ref|NM_106112.1| Arabidopsis thaliana ATHVA22A AT1G74520 (A... 206 7e-056
gb|AU239702.1|AU239702 AU239702 RAFL21 Arabidopsis thaliana... 206 7e-056
gb|BT005492.1| Arabidopsis thaliana clone U51348 putative A... 206 7e-056
gb|CF652691.1|CF652691 71-L020135-066-001-M17-SP6P MPIZ-ADI... 206 8e-054
gb|BP841264.1|BP841264 BP841264 RAFL19 Arabidopsis thaliana... 201 3e-050
gb|AI993483.1|AI993483 701496446 A. thaliana, Ohio State cl... 197 3e-049
gb|AY065456.1| Arabidopsis thaliana putative AtHVA22c prote... 158 8e-041
ref|NM_105638.2| Arabidopsis thaliana ATHVA22C AT1G69700 (A... 158 8e-041
gb|AY084473.1| Arabidopsis thaliana clone 108964 mRNA, comp... 158 8e-041
gb|AF141661.1| Arabidopsis thaliana AtHVA22c mRNA, complete... 158 8e-041
gb|AY142652.1| Arabidopsis thaliana putative AtHVA22c prote... 158 8e-041
emb|AX506032.1| Sequence 727 from Patent WO0216655 158 8e-041
gb|AF141660.1| Arabidopsis thaliana AtHVA22b mRNA, complete... 168 2e-040
gb|AU239087.1|AU239087 AU239087 RAFL19 Arabidopsis thaliana... 168 2e-040
gb|BT005579.1| Arabidopsis thaliana clone U50988 putative A... 168 2e-040
emb|BX833244.1|CNS0A1UO Arabidopsis thaliana Full-length cD... 168 2e-040
dbj|AK118234.1| Arabidopsis thaliana At5g62490 mRNA for put... 168 2e-040
ref|NM_125643.3| Arabidopsis thaliana ATHVA22B AT5G62490 (A... 168 2e-040
gb|T88341.1|T88341 12037 Lambda-PRL2 Arabidopsis thaliana c... 167 4e-040
gb|AF141977.1| Arabidopsis thaliana AtHVA22a gene, complete... 85 1e-039
emb|BX818107.1|CNS0AE5T Arabidopsis thaliana Full-length cD... 154 5e-039
gb|T21930.1|T21930 3938 Lambda-PRL2 Arabidopsis thaliana cD... 157 5e-039
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 85 4e-037
gb|AC011765.6|AC011765 Arabidopsis thaliana chromosome 1 BA... 85 5e-037
gb|BP853930.1|BP853930 BP853930 RAFL21 Arabidopsis thaliana... 152 2e-035
emb|BX833330.1|CNS0A1U1 Arabidopsis thaliana Full-length cD... 149 8e-035
gb|BP813131.1|BP813131 BP813131 RAFL19 Arabidopsis thaliana... 149 1e-034
gb|BP561351.2|BP561351 BP561351 RAFL6 Arabidopsis thaliana ... 143 6e-033
gb|R30264.1|R30264 12869 Lambda-PRL2 Arabidopsis thaliana c... 138 1e-032
emb|BX822007.1|CNS0A963 Arabidopsis thaliana Full-length cD... 138 2e-031
emb|BX822073.1|CNS0A97P Arabidopsis thaliana Full-length cD... 138 2e-031
dbj|AK175397.1| Arabidopsis thaliana mRNA, complete cds, cl... 138 2e-031
ref|NM_129843.2| Arabidopsis thaliana unknown protein AT2G4... 138 2e-031
gb|BP855169.1|BP855169 BP855169 RAFL21 Arabidopsis thaliana... 129 2e-029
gb|BP826171.1|BP826171 BP826171 RAFL19 Arabidopsis thaliana... 115 1e-028
gb|BX840742.1|BX840742 BX840742 Arabidopsis thaliana Siliqu... 127 6e-028
gb|AF290892.1|AF290892 Arabidopsis thaliana AtHVA22e mRNA, ... 121 3e-026
gb|AY084933.1| Arabidopsis thaliana clone 121993 mRNA, comp... 121 3e-026
emb|BX833604.1|CNS0A1S6 Arabidopsis thaliana Full-length cD... 121 3e-026
ref|NM_124450.3| Arabidopsis thaliana ATHVA22E AT5G50720 (A... 121 3e-026
gb|AI995946.1|AI995946 701549338 A. thaliana, Columbia Col-... 121 4e-026
gb|BP868176.1|BP868176 BP868176 RAFL21 Arabidopsis thaliana... 91 4e-025
gb|BP859440.1|BP859440 BP859440 RAFL21 Arabidopsis thaliana... 117 5e-025
gb|BP819733.1|BP819733 BP819733 RAFL19 Arabidopsis thaliana... 116 9e-025
gb|BE037936.1|BE037936 AA06F11 AA Arabidopsis thaliana cDNA... 116 1e-024
gb|CF651570.1|CF651570 13-L020577-066-004-I03-SP6P MPIZ-ADI... 116 1e-024
gb|AV552520.1|AV552520 AV552520 Arabidopsis thaliana roots ... 116 1e-024
gb|AF141662.1| Arabidopsis thaliana AtHVA22d mRNA, complete... 116 1e-024
gb|AY059750.1| Arabidopsis thaliana putative abscisic acid-... 116 1e-024
gb|AY113978.1| Arabidopsis thaliana putative abscisic acid-... 116 1e-024
gb|AY086850.1| Arabidopsis thaliana clone 28535 mRNA, compl... 116 1e-024
ref|NM_118628.2| Arabidopsis thaliana ATHVA22D AT4G24960 (A... 116 1e-024
gb|AV825274.1|AV825274 AV825274 RAFL7 Arabidopsis thaliana ... 113 6e-024
gb|BP821616.1|BP821616 BP821616 RAFL19 Arabidopsis thaliana... 109 1e-022
gb|BP827959.1|BP827959 BP827959 RAFL19 Arabidopsis thaliana... 90 4e-022
gb|BG459171.1|BG459171 M64M05STM Arabidopsis developing see... 105 3e-021
gb|AF141980.1| Arabidopsis thaliana AtHVA22b gene, complete... 68 6e-021
>gb|CF652692.1|CF652692 71-L020135w-066-001-M17-SP6P MPIZ-ADIS-066 Arabidopsis thaliana
cDNA clone MPIZp2001M171Q 5-PRIME, mRNA sequence
Length = 811
Score = 206 bits (445), Expect(2) = 7e-056
Identities = 77/125 (61%), Positives = 98/125 (78%)
Frame = -3 / +1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKVL NFDVLAGP++SL YPLYASV+AIET++ DD+QWLTYWV S +TL EL
Sbjct: 154 GAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIEL 333
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYIXRNEKL 211
TFA +IEWLP WSY KL C LV+P+F+G AYVY+HF RP+FVN + +NIWY+ + +
Sbjct: 334 TFAKLIEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPRSINIWYVPKKMDI 513
Query: 210 GKSDD 196
+ D
Sbjct: 514 FRKPD 528
Score = 117 bits (250), Expect = 5e-025
Identities = 67/129 (51%), Positives = 75/129 (58%)
Frame = +2 / -3
Query: 173 YLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AXPLNQGKTXXQLKNSFAY 352
+ +A +S L F Y M + TN G K S*T*A PL G T Q+K SF Y
Sbjct: 551 FSAAVNTSSGFLKISIFFGTYQMLMLRGLTNTGLTKCS*T*AAPLK*GITSQQVKISFMY 372
Query: 353 DQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALTEAYRG*ASDMSGPARTS 532
D G+HS+ A VSS V NE TQ*VSHC SS VSIA TEAYRG* +GPARTS
Sbjct: 371 DHIGNHSMSLANVSSMSVSNE*RTQ*VSHCLSSA*D*VSIA*TEAYRG*TRLTTGPARTS 192
Query: 533 KLLASTLRK 559
K L TLRK
Sbjct: 191 KFLRRTLRK 165
Score = 33.6 bits (67), Expect(2) = 7e-056
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3 / +1
Query: 207 KSDDVXXAAERYIEQNXXXAFXXLISKS 124
K DDV AAE+YI +N AF ++S++
Sbjct: 520 KPDDVLTAAEKYIAENGPDAFEKILSRA 603
>gb|AF141659.1| Arabidopsis thaliana AtHVA22a mRNA, complete cds
Length = 722
Score = 206 bits (445), Expect(2) = 7e-056
Identities = 77/125 (61%), Positives = 98/125 (78%)
Frame = -3 / +3
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKVL NFDVLAGP++SL YPLYASV+AIET++ DD+QWLTYWV S +TL EL
Sbjct: 63 GAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIEL 242
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYIXRNEKL 211
TFA +IEWLP WSY KL C LV+P+F+G AYVY+HF RP+FVN + +NIWY+ + +
Sbjct: 243 TFAKLIEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPRSINIWYVPKKMDI 422
Query: 210 GKSDD 196
+ D
Sbjct: 423 FRKPD 437
Score = 117 bits (250), Expect = 5e-025
Identities = 67/129 (51%), Positives = 75/129 (58%)
Frame = +2 / -2
Query: 173 YLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AXPLNQGKTXXQLKNSFAY 352
+ +A +S L F Y M + TN G K S*T*A PL G T Q+K SF Y
Sbjct: 460 FSAAVNTSSGFLKISIFFGTYQMLMLRGLTNTGLTKCS*T*AAPLK*GITSQQVKISFMY 281
Query: 353 DQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALTEAYRG*ASDMSGPARTS 532
D G+HS+ A VSS V NE TQ*VSHC SS VSIA TEAYRG* +GPARTS
Sbjct: 280 DHIGNHSMSLANVSSMSVSNE*RTQ*VSHCLSSA*D*VSIA*TEAYRG*TRLTTGPARTS 101
Query: 533 KLLASTLRK 559
K L TLRK
Sbjct: 100 KFLRRTLRK 74
Score = 33.6 bits (67), Expect(2) = 7e-056
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3 / +3
Query: 207 KSDDVXXAAERYIEQNXXXAFXXLISKS 124
K DDV AAE+YI +N AF ++S++
Sbjct: 429 KPDDVLTAAEKYIAENGPDAFEKILSRA 512
>dbj|AK118825.1| Arabidopsis thaliana At1g74520 mRNA for putative AtHVA22a, complete
cds, clone: RAFL21-15-P15
Length = 723
Score = 206 bits (445), Expect(2) = 7e-056
Identities = 77/125 (61%), Positives = 98/125 (78%)
Frame = -3 / +1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKVL NFDVLAGP++SL YPLYASV+AIET++ DD+QWLTYWV S +TL EL
Sbjct: 64 GAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIEL 243
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYIXRNEKL 211
TFA +IEWLP WSY KL C LV+P+F+G AYVY+HF RP+FVN + +NIWY+ + +
Sbjct: 244 TFAKLIEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPRSINIWYVPKKMDI 423
Query: 210 GKSDD 196
+ D
Sbjct: 424 FRKPD 438
Score = 117 bits (250), Expect = 5e-025
Identities = 67/129 (51%), Positives = 75/129 (58%)
Frame = +2 / -2
Query: 173 YLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AXPLNQGKTXXQLKNSFAY 352
+ +A +S L F Y M + TN G K S*T*A PL G T Q+K SF Y
Sbjct: 461 FSAAVNTSSGFLKISIFFGTYQMLMLRGLTNTGLTKCS*T*AAPLK*GITSQQVKISFMY 282
Query: 353 DQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALTEAYRG*ASDMSGPARTS 532
D G+HS+ A VSS V NE TQ*VSHC SS VSIA TEAYRG* +GPARTS
Sbjct: 281 DHIGNHSMSLANVSSMSVSNE*RTQ*VSHCLSSA*D*VSIA*TEAYRG*TRLTTGPARTS 102
Query: 533 KLLASTLRK 559
K L TLRK
Sbjct: 101 KFLRRTLRK 75
Score = 33.6 bits (67), Expect(2) = 7e-056
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3 / +1
Query: 207 KSDDVXXAAERYIEQNXXXAFXXLISKS 124
K DDV AAE+YI +N AF ++S++
Sbjct: 430 KPDDVLTAAEKYIAENGPDAFEKILSRA 513
>ref|NM_106112.1| Arabidopsis thaliana ATHVA22A AT1G74520 (ATHVA22A) mRNA, complete
cds
Length = 722
Score = 206 bits (445), Expect(2) = 7e-056
Identities = 77/125 (61%), Positives = 98/125 (78%)
Frame = -3 / +3
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKVL NFDVLAGP++SL YPLYASV+AIET++ DD+QWLTYWV S +TL EL
Sbjct: 63 GAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIEL 242
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYIXRNEKL 211
TFA +IEWLP WSY KL C LV+P+F+G AYVY+HF RP+FVN + +NIWY+ + +
Sbjct: 243 TFAKLIEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPRSINIWYVPKKMDI 422
Query: 210 GKSDD 196
+ D
Sbjct: 423 FRKPD 437
Score = 117 bits (250), Expect = 5e-025
Identities = 67/129 (51%), Positives = 75/129 (58%)
Frame = +2 / -2
Query: 173 YLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AXPLNQGKTXXQLKNSFAY 352
+ +A +S L F Y M + TN G K S*T*A PL G T Q+K SF Y
Sbjct: 460 FSAAVNTSSGFLKISIFFGTYQMLMLRGLTNTGLTKCS*T*AAPLK*GITSQQVKISFMY 281
Query: 353 DQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALTEAYRG*ASDMSGPARTS 532
D G+HS+ A VSS V NE TQ*VSHC SS VSIA TEAYRG* +GPARTS
Sbjct: 280 DHIGNHSMSLANVSSMSVSNE*RTQ*VSHCLSSA*D*VSIA*TEAYRG*TRLTTGPARTS 101
Query: 533 KLLASTLRK 559
K L TLRK
Sbjct: 100 KFLRRTLRK 74
Score = 33.6 bits (67), Expect(2) = 7e-056
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3 / +3
Query: 207 KSDDVXXAAERYIEQNXXXAFXXLISKS 124
K DDV AAE+YI +N AF ++S++
Sbjct: 429 KPDDVLTAAEKYIAENGPDAFEKILSRA 512
>gb|AU239702.1|AU239702 AU239702 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-15-P15 5',
mRNA sequence
Length = 651
Score = 206 bits (445), Expect(2) = 7e-056
Identities = 77/125 (61%), Positives = 98/125 (78%)
Frame = -3 / +1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKVL NFDVLAGP++SL YPLYASV+AIET++ DD+QWLTYWV S +TL EL
Sbjct: 64 GAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIEL 243
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYIXRNEKL 211
TFA +IEWLP WSY KL C LV+P+F+G AYVY+HF RP+FVN + +NIWY+ + +
Sbjct: 244 TFAKLIEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPRSINIWYVPKKMDI 423
Query: 210 GKSDD 196
+ D
Sbjct: 424 FRKPD 438
Score = 117 bits (250), Expect = 5e-025
Identities = 67/129 (51%), Positives = 75/129 (58%)
Frame = +2 / -2
Query: 173 YLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AXPLNQGKTXXQLKNSFAY 352
+ +A +S L F Y M + TN G K S*T*A PL G T Q+K SF Y
Sbjct: 461 FSAAVNTSSGFLKISIFFGTYQMLMLRGLTNTGLTKCS*T*AAPLK*GITSQQVKISFMY 282
Query: 353 DQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALTEAYRG*ASDMSGPARTS 532
D G+HS+ A VSS V NE TQ*VSHC SS VSIA TEAYRG* +GPARTS
Sbjct: 281 DHIGNHSMSLANVSSMSVSNE*RTQ*VSHCLSSA*D*VSIA*TEAYRG*TRLTTGPARTS 102
Query: 533 KLLASTLRK 559
K L TLRK
Sbjct: 101 KFLRRTLRK 75
Score = 33.6 bits (67), Expect(2) = 7e-056
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3 / +1
Query: 207 KSDDVXXAAERYIEQNXXXAFXXLISKS 124
K DDV AAE+YI +N AF ++S++
Sbjct: 430 KPDDVLTAAEKYIAENGPDAFEKILSRA 513
>gb|BT005492.1| Arabidopsis thaliana clone U51348 putative AtHVA22a protein
(At1g74520) mRNA, complete cds
Length = 565
Score = 206 bits (445), Expect(2) = 7e-056
Identities = 77/125 (61%), Positives = 98/125 (78%)
Frame = -3 / +1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKVL NFDVLAGP++SL YPLYASV+AIET++ DD+QWLTYWV S +TL EL
Sbjct: 10 GAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIEL 189
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYIXRNEKL 211
TFA +IEWLP WSY KL C LV+P+F+G AYVY+HF RP+FVN + +NIWY+ + +
Sbjct: 190 TFAKLIEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPRSINIWYVPKKMDI 369
Query: 210 GKSDD 196
+ D
Sbjct: 370 FRKPD 384
Score = 117 bits (250), Expect = 5e-025
Identities = 67/129 (51%), Positives = 75/129 (58%)
Frame = +2 / -3
Query: 173 YLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AXPLNQGKTXXQLKNSFAY 352
+ +A +S L F Y M + TN G K S*T*A PL G T Q+K SF Y
Sbjct: 407 FSAAVNTSSGFLKISIFFGTYQMLMLRGLTNTGLTKCS*T*AAPLK*GITSQQVKISFMY 228
Query: 353 DQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALTEAYRG*ASDMSGPARTS 532
D G+HS+ A VSS V NE TQ*VSHC SS VSIA TEAYRG* +GPARTS
Sbjct: 227 DHIGNHSMSLANVSSMSVSNE*RTQ*VSHCLSSA*D*VSIA*TEAYRG*TRLTTGPARTS 48
Query: 533 KLLASTLRK 559
K L TLRK
Sbjct: 47 KFLRRTLRK 21
Score = 33.6 bits (67), Expect(2) = 7e-056
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3 / +1
Query: 207 KSDDVXXAAERYIEQNXXXAFXXLISKS 124
K DDV AAE+YI +N AF ++S++
Sbjct: 376 KPDDVLTAAEKYIAENGPDAFEKILSRA 459
>gb|CF652691.1|CF652691 71-L020135-066-001-M17-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001M171Q 5-PRIME, mRNA sequence
Length = 581
Score = 206 bits (445), Expect(2) = 8e-054
Identities = 77/125 (61%), Positives = 98/125 (78%)
Frame = -3 / +1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKVL NFDVLAGP++SL YPLYASV+AIET++ DD+QWLTYWV S +TL EL
Sbjct: 154 GAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIEL 333
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYIXRNEKL 211
TFA +IEWLP WSY KL C LV+P+F+G AYVY+HF RP+FVN + +NIWY+ + +
Sbjct: 334 TFAKLIEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPRSINIWYVPKKMDI 513
Query: 210 GKSDD 196
+ D
Sbjct: 514 FRKPD 528
Score = 117 bits (250), Expect = 5e-025
Identities = 67/129 (51%), Positives = 75/129 (58%)
Frame = +2 / -1
Query: 173 YLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AXPLNQGKTXXQLKNSFAY 352
+ +A +S L F Y M + TN G K S*T*A PL G T Q+K SF Y
Sbjct: 551 FSAAVNTSSGFLKISIFFGTYQMLMLRGLTNTGLTKCS*T*AAPLK*GITSQQVKISFMY 372
Query: 353 DQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALTEAYRG*ASDMSGPARTS 532
D G+HS+ A VSS V NE TQ*VSHC SS VSIA TEAYRG* +GPARTS
Sbjct: 371 DHIGNHSMSLANVSSMSVSNE*RTQ*VSHCLSSA*D*VSIA*TEAYRG*TRLTTGPARTS 192
Query: 533 KLLASTLRK 559
K L TLRK
Sbjct: 191 KFLRRTLRK 165
Score = 26.7 bits (52), Expect(2) = 8e-054
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3 / +1
Query: 207 KSDDVXXAAERYIEQN 160
K DDV AAE+YI +N
Sbjct: 520 KPDDVLTAAEKYIAEN 567
>gb|BP841264.1|BP841264 BP841264 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-32-K22 5',
mRNA sequence
Length = 390
Score = 201 bits (433), Expect = 3e-050
Identities = 75/113 (66%), Positives = 92/113 (81%)
Frame = -3 / +3
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKVL NFDVLAGP++SL YPLYASV+AIET++ DD+QWLTYWV S +TL EL
Sbjct: 51 GAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIEL 230
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWY 232
TFA +IEWLP WSY KL C LV+P+F+G AYVY+H RP+FVN + +NIWY
Sbjct: 231 TFAKLIEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHLVRPVFVNPRSINIWY 389
Score = 113 bits (242), Expect = 6e-024
Identities = 63/109 (57%), Positives = 68/109 (62%)
Frame = +2 / -3
Query: 233 YHMXTIWRFTNIGRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVIN 412
Y M + TN G K S*T*A PL G T Q+K SF YD G+HS+ A VSS V N
Sbjct: 388 YQMLMLRGLTNTGLTKCS*T*AAPLK*GITSQQVKISFMYDHIGNHSMSLANVSSMSVSN 209
Query: 413 EXXTQ*VSHC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
E TQ*VSHC SS VSIA TEAYRG* +GPARTSK L TLRK
Sbjct: 208 E*RTQ*VSHCLSSA*D*VSIA*TEAYRG*TRLTTGPARTSKFLRRTLRK 62
>gb|AI993483.1|AI993483 701496446 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701496446, mRNA sequence
Length = 487
Score = 197 bits (425), Expect = 3e-049
Identities = 73/125 (58%), Positives = 95/125 (76%)
Frame = -3 / +3
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKVL NFDVLAGP++SL YPLYASV+AIET++ D +QWLTYWV S + L EL
Sbjct: 63 GAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADSKQWLTYWVLYSLLRLIEL 242
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYIXRNEKL 211
TFA +IEW+P WSY KL C LV+P+F+G YVY+HF RP+FVN + +NIWY+ + +
Sbjct: 243 TFAKLIEWIPIWSYMKLILTCWLVIPYFSGADYVYEHFVRPVFVNPRSINIWYVPKKMDI 422
Query: 210 GKSDD 196
+ D
Sbjct: 423 FRKPD 437
Score = 117 bits (250), Expect = 5e-025
Identities = 66/132 (50%), Positives = 76/132 (57%)
Frame = +2 / -1
Query: 164 CSIYLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AXPLNQGKTXXQLKNS 343
C++ LS+ +S L F Y M + TN G K S*T*+ PL G T Q+K S
Sbjct: 469 CNVLLSSCYTSSGFLKISIFFGTYQMLMLRGLTNTGLTKCS*T*SAPLK*GITSQQVKIS 290
Query: 344 FAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALTEAYRG*ASDMSGPA 523
F YD G HS+ A VSS + NE TQ*VSHC S VSIA TEAYRG* +GPA
Sbjct: 289 FMYDHIGIHSMSLANVSSMSLSNE*RTQ*VSHCLLSA*D*VSIA*TEAYRG*TRLTTGPA 110
Query: 524 RTSKLLASTLRK 559
RTSK L TLRK
Sbjct: 109 RTSKFLRRTLRK 74
>gb|AY065456.1| Arabidopsis thaliana putative AtHVA22c protein (At1g69700) mRNA,
complete cds
Length = 826
Score = 158 bits (339), Expect(2) = 8e-041
Identities = 62/110 (56%), Positives = 79/110 (71%)
Frame = -3 / +2
Query: 579 SKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITL 400
S G + L+VL NFDVLA PL++L YPLYASV+AIET++ +D+QWLTYWV + I+L
Sbjct: 101 SNSGDDNVLQVLIKNFDVLALPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISL 280
Query: 399 FELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
FELTF+ +EW P W Y KLF C LVLP FNG ++Y HF RP + + Q
Sbjct: 281 FELTFSKPLEWFPIWPYMKLFGICWLVLPQFNGAEHIYKHFIRPFYRDPQ 430
Score = 31.8 bits (63), Expect(2) = 8e-041
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3 / +2
Query: 201 DDVXXAAERYIEQNXXXAFXXLISK 127
DD+ AAE+Y+EQ+ AF +I K
Sbjct: 497 DDILTAAEKYMEQHGTEAFERMIVK 571
>ref|NM_105638.2| Arabidopsis thaliana ATHVA22C AT1G69700 (ATHVA22C) mRNA, complete
cds
Length = 815
Score = 158 bits (339), Expect(2) = 8e-041
Identities = 62/110 (56%), Positives = 79/110 (71%)
Frame = -3 / +1
Query: 579 SKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITL 400
S G + L+VL NFDVLA PL++L YPLYASV+AIET++ +D+QWLTYWV + I+L
Sbjct: 106 SNSGDDNVLQVLIKNFDVLALPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISL 285
Query: 399 FELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
FELTF+ +EW P W Y KLF C LVLP FNG ++Y HF RP + + Q
Sbjct: 286 FELTFSKPLEWFPIWPYMKLFGICWLVLPQFNGAEHIYKHFIRPFYRDPQ 435
Score = 31.8 bits (63), Expect(2) = 8e-041
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3 / +1
Query: 201 DDVXXAAERYIEQNXXXAFXXLISK 127
DD+ AAE+Y+EQ+ AF +I K
Sbjct: 502 DDILTAAEKYMEQHGTEAFERMIVK 576
>gb|AY084473.1| Arabidopsis thaliana clone 108964 mRNA, complete sequence
Length = 813
Score = 158 bits (339), Expect(2) = 8e-041
Identities = 62/110 (56%), Positives = 79/110 (71%)
Frame = -3 / +1
Query: 579 SKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITL 400
S G + L+VL NFDVLA PL++L YPLYASV+AIET++ +D+QWLTYWV + I+L
Sbjct: 106 SNSGDDNVLQVLIKNFDVLALPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISL 285
Query: 399 FELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
FELTF+ +EW P W Y KLF C LVLP FNG ++Y HF RP + + Q
Sbjct: 286 FELTFSKPLEWFPIWPYMKLFGICWLVLPQFNGAEHIYKHFIRPFYRDPQ 435
Score = 31.8 bits (63), Expect(2) = 8e-041
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3 / +1
Query: 201 DDVXXAAERYIEQNXXXAFXXLISK 127
DD+ AAE+Y+EQ+ AF +I K
Sbjct: 502 DDILTAAEKYMEQHGTEAFERMIVK 576
>gb|AF141661.1| Arabidopsis thaliana AtHVA22c mRNA, complete cds
Length = 788
Score = 158 bits (339), Expect(2) = 8e-041
Identities = 62/110 (56%), Positives = 79/110 (71%)
Frame = -3 / +1
Query: 579 SKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITL 400
S G + L+VL NFDVLA PL++L YPLYASV+AIET++ +D+QWLTYWV + I+L
Sbjct: 79 SNSGDDNVLQVLIKNFDVLALPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISL 258
Query: 399 FELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
FELTF+ +EW P W Y KLF C LVLP FNG ++Y HF RP + + Q
Sbjct: 259 FELTFSKPLEWFPIWPYMKLFGICWLVLPQFNGAEHIYKHFIRPFYRDPQ 408
Score = 31.8 bits (63), Expect(2) = 8e-041
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3 / +1
Query: 201 DDVXXAAERYIEQNXXXAFXXLISK 127
DD+ AAE+Y+EQ+ AF +I K
Sbjct: 475 DDILTAAEKYMEQHGTEAFERMIVK 549
>gb|AY142652.1| Arabidopsis thaliana putative AtHVA22c protein (At1g69700) mRNA,
complete cds
Length = 586
Score = 158 bits (339), Expect(2) = 8e-041
Identities = 62/110 (56%), Positives = 79/110 (71%)
Frame = -3 / +1
Query: 579 SKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITL 400
S G + L+VL NFDVLA PL++L YPLYASV+AIET++ +D+QWLTYWV + I+L
Sbjct: 7 SNSGDDNVLQVLIKNFDVLALPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISL 186
Query: 399 FELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
FELTF+ +EW P W Y KLF C LVLP FNG ++Y HF RP + + Q
Sbjct: 187 FELTFSKPLEWFPIWPYMKLFGICWLVLPQFNGAEHIYKHFIRPFYRDPQ 336
Score = 31.8 bits (63), Expect(2) = 8e-041
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3 / +1
Query: 201 DDVXXAAERYIEQNXXXAFXXLISK 127
DD+ AAE+Y+EQ+ AF +I K
Sbjct: 403 DDILTAAEKYMEQHGTEAFERMIVK 477
>emb|AX506032.1| Sequence 727 from Patent WO0216655
Length = 555
Score = 158 bits (339), Expect(2) = 8e-041
Identities = 62/110 (56%), Positives = 79/110 (71%)
Frame = -3 / +1
Query: 579 SKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITL 400
S G + L+VL NFDVLA PL++L YPLYASV+AIET++ +D+QWLTYWV + I+L
Sbjct: 7 SNSGDDNVLQVLIKNFDVLALPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISL 186
Query: 399 FELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
FELTF+ +EW P W Y KLF C LVLP FNG ++Y HF RP + + Q
Sbjct: 187 FELTFSKPLEWFPIWPYMKLFGICWLVLPQFNGAEHIYKHFIRPFYRDPQ 336
Score = 31.8 bits (63), Expect(2) = 8e-041
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3 / +1
Query: 201 DDVXXAAERYIEQNXXXAFXXLISK 127
DD+ AAE+Y+EQ+ AF +I K
Sbjct: 403 DDILTAAEKYMEQHGTEAFERMIVK 477
>gb|AF141660.1| Arabidopsis thaliana AtHVA22b mRNA, complete cds
Length = 693
Score = 168 bits (362), Expect = 2e-040
Identities = 64/114 (56%), Positives = 83/114 (72%)
Frame = -3 / +1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G GS +KV+ NFDV+AGP+ISL YPLYASVRAIE+++ DD+QWLTYW S I LFEL
Sbjct: 34 GIGSLVKVIFKNFDVIAGPMISLVYPLYASVRAIESRSHGDDKQWLTYWALYSLIKLFEL 213
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYI 229
TF ++EW+P + YAKL LVLP NG AY+Y+H+ R ++ VN+WY+
Sbjct: 214 TFFRLLEWIPLYPYAKLALTSWLVLPGMNGAAYLYEHYVRSFLLSPHTVNVWYV 375
>gb|AU239087.1|AU239087 AU239087 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-54-J17 5',
mRNA sequence
Length = 648
Score = 168 bits (361), Expect = 2e-040
Identities = 64/114 (56%), Positives = 83/114 (72%)
Frame = -3 / +2
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G GS +KV+ NFDV+AGP+ISL YPLYASVRAIE+++ DD+QWLTYW S I LFEL
Sbjct: 83 GIGSLVKVIFKNFDVIAGPVISLVYPLYASVRAIESRSHGDDKQWLTYWALYSLIKLFEL 262
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYI 229
TF ++EW+P + YAKL LVLP NG AY+Y+H+ R ++ VN+WY+
Sbjct: 263 TFFRLLEWIPLYPYAKLALTSWLVLPGMNGAAYLYEHYVRSFLLSPHTVNVWYV 424
>gb|BT005579.1| Arabidopsis thaliana clone U50988 putative AtHVA22b protein
(At5g62490) mRNA, complete cds
Length = 535
Score = 168 bits (361), Expect = 2e-040
Identities = 64/114 (56%), Positives = 83/114 (72%)
Frame = -3 / +1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G GS +KV+ NFDV+AGP+ISL YPLYASVRAIE+++ DD+QWLTYW S I LFEL
Sbjct: 10 GIGSLVKVIFKNFDVIAGPVISLVYPLYASVRAIESRSHGDDKQWLTYWALYSLIKLFEL 189
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYI 229
TF ++EW+P + YAKL LVLP NG AY+Y+H+ R ++ VN+WY+
Sbjct: 190 TFFRLLEWIPLYPYAKLALTSWLVLPGMNGAAYLYEHYVRSFLLSPHTVNVWYV 351
>emb|BX833244.1|CNS0A1UO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL40ZC11 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 794
Score = 168 bits (361), Expect = 2e-040
Identities = 64/114 (56%), Positives = 83/114 (72%)
Frame = -3 / +2
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G GS +KV+ NFDV+AGP+ISL YPLYASVRAIE+++ DD+QWLTYW S I LFEL
Sbjct: 86 GIGSLVKVIFKNFDVIAGPVISLVYPLYASVRAIESRSHGDDKQWLTYWALYSLIKLFEL 265
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYI 229
TF ++EW+P + YAKL LVLP NG AY+Y+H+ R ++ VN+WY+
Sbjct: 266 TFFRLLEWIPLYPYAKLALTSWLVLPGMNGAAYLYEHYVRSFLLSPHTVNVWYV 427
>dbj|AK118234.1| Arabidopsis thaliana At5g62490 mRNA for putative AtHVA22b, complete
cds, clone: RAFL19-54-J17
Length = 734
Score = 168 bits (361), Expect = 2e-040
Identities = 64/114 (56%), Positives = 83/114 (72%)
Frame = -3 / +2
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G GS +KV+ NFDV+AGP+ISL YPLYASVRAIE+++ DD+QWLTYW S I LFEL
Sbjct: 83 GIGSLVKVIFKNFDVIAGPVISLVYPLYASVRAIESRSHGDDKQWLTYWALYSLIKLFEL 262
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYI 229
TF ++EW+P + YAKL LVLP NG AY+Y+H+ R ++ VN+WY+
Sbjct: 263 TFFRLLEWIPLYPYAKLALTSWLVLPGMNGAAYLYEHYVRSFLLSPHTVNVWYV 424
>ref|NM_125643.3| Arabidopsis thaliana ATHVA22B AT5G62490 (ATHVA22B) mRNA, complete
cds
Length = 790
Score = 168 bits (361), Expect = 2e-040
Identities = 64/114 (56%), Positives = 83/114 (72%)
Frame = -3 / +2
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G GS +KV+ NFDV+AGP+ISL YPLYASVRAIE+++ DD+QWLTYW S I LFEL
Sbjct: 86 GIGSLVKVIFKNFDVIAGPVISLVYPLYASVRAIESRSHGDDKQWLTYWALYSLIKLFEL 265
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYI 229
TF ++EW+P + YAKL LVLP NG AY+Y+H+ R ++ VN+WY+
Sbjct: 266 TFFRLLEWIPLYPYAKLALTSWLVLPGMNGAAYLYEHYVRSFLLSPHTVNVWYV 427
>gb|T88341.1|T88341 12037 Lambda-PRL2 Arabidopsis thaliana cDNA clone 161B10T7, mRNA
sequence
Length = 379
Score = 167 bits (359), Expect = 4e-040
Identities = 64/103 (62%), Positives = 80/103 (77%)
Frame = -3 / +2
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKVL NFDVL GP++SL YPLYAS +AIET++ DD+QWLTYWV S +TL L
Sbjct: 8 GAGNFLKVLLRNFDVLXGPVVSLVYPLYASXQAIETQSHADDKQWLTYWVLXSLLTLIXL 187
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMF 262
TFA +IEWLP WSY +L C LV+P+F+G AY Y+ F R +F
Sbjct: 188 TFAKLIEWLPIWSYMRLIXTCWLVIPYFSGAAYXYEXFVRXVF 316
>gb|AF141977.1| Arabidopsis thaliana AtHVA22a gene, complete cds
Length = 2384
Score = 85.4 bits (180), Expect(4) = 1e-039
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = -3 / +3
Query: 366 LPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYIXRNEKLGKSDD 196
LP WSY KL C LV+P+F+G AYVY+HF RP+FVN + +NIWY+ + + + D
Sbjct: 1836 LPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPRSINIWYVPKKMDIFRKPD 2006
Score = 76.7 bits (161), Expect(4) = 1e-039
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = -3 / +2
Query: 513 LISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEW 367
L++++ YASV+AIET++ DD+QWLTYWV S +TL ELTFA +IEW
Sbjct: 1607 LLNVSMARYASVQAIETQSHADDKQWLTYWVLYSLLTLIELTFAKLIEW 1753
Score = 35.9 bits (72), Expect(4) = 1e-039
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 570 GSGSFLKVLANNFDVLAG 517
G+G+FLKVL NFDVLAG
Sbjct: 1211 GAGNFLKVLLRNFDVLAG 1264
Score = 33.1 bits (66), Expect(4) = 1e-039
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3 / +3
Query: 207 KSDDVXXAAERYIEQNXXXAFXXLISK 127
K DDV AAE+YI +N AF ++S+
Sbjct: 1998 KPDDVLTAAEKYIAENGPDAFEKILSR 2078
>emb|BX818107.1|CNS0AE5T Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL61ZD02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 781
Score = 154 bits (330), Expect(2) = 5e-039
Identities = 61/110 (55%), Positives = 78/110 (70%)
Frame = -3 / +1
Query: 579 SKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITL 400
S G + L+VL NFDVLA PL++L YPLYASV+AIET++ +D+QWLTYWV + I+L
Sbjct: 79 SNSGDDNVLQVLIKNFDVLALPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISL 258
Query: 399 FELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
FELTF+ +EW P W KLF C LVLP FNG ++Y HF RP + + Q
Sbjct: 259 FELTFSKPLEWFPIWPNMKLFGICWLVLPQFNGAEHIYKHFIRPFYRDPQ 408
Score = 29.9 bits (59), Expect(2) = 5e-039
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3 / +1
Query: 201 DDVXXAAERYIEQNXXXAFXXLISK 127
DD+ AAE+Y+EQ+ AF + K
Sbjct: 475 DDILTAAEKYMEQHGTEAFERMSKK 549
>gb|T21930.1|T21930 3938 Lambda-PRL2 Arabidopsis thaliana cDNA clone 104I15T7, mRNA
sequence
Length = 436
Score = 157 bits (338), Expect(2) = 5e-039
Identities = 60/88 (68%), Positives = 72/88 (81%)
Frame = -3 / +2
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKVL NFDVLAGP++SL YPLYASV+AIET++ DD+QWLTYWV S +TL EL
Sbjct: 8 GAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIEL 187
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWF 307
TFA +IEWLP WSY KL C LV+P+F
Sbjct: 188 TFAKLIEWLPIWSYMKLILTCWLVIPYF 271
Score = 26.3 bits (51), Expect(2) = 5e-039
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3 / +3
Query: 324 LVLPWFNGXAYVYDHF 277
L P F+G AYVY+ F
Sbjct: 255 LXFPTFSGAAYVYEQF 302
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 85.4 bits (180), Expect(3) = 4e-037
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = -3 / -2
Query: 366 LPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYIXRNEKLGKSDD 196
LP WSY KL C LV+P+F+G AYVY+HF RP+FVN + +NIWY+ + + + D
Sbjct: 12249841 LPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPRSINIWYVPKKMDIFRKPD 12249671
Score = 76.7 bits (161), Expect(3) = 4e-037
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = -3 / -1
Query: 513 LISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEW 367
L++++ YASV+AIET++ DD+QWLTYWV S +TL ELTFA +IEW
Sbjct: 12250070 LLNVSMARYASVQAIETQSHADDKQWLTYWVLYSLLTLIELTFAKLIEW 12249924
Score = 33.1 bits (66), Expect(3) = 4e-037
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3 / -2
Query: 207 KSDDVXXAAERYIEQNXXXAFXXLISK 127
K DDV AAE+YI +N AF ++S+
Sbjct: 12249679 KPDDVLTAAEKYIAENGPDAFEKILSR 12249599
>gb|AC011765.6|AC011765 Arabidopsis thaliana chromosome 1 BAC F1M20 genomic sequence, complete
sequence
Length = 134402
Score = 85.4 bits (180), Expect(3) = 5e-037
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = -3 / -3
Query: 366 LPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYIXRNEKLGKSDD 196
LP WSY KL C LV+P+F+G AYVY+HF RP+FVN + +NIWY+ + + + D
Sbjct: 64842 LPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPRSINIWYVPKKMDIFRKPD 64672
Score = 76.7 bits (161), Expect(3) = 5e-037
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = -3 / -2
Query: 513 LISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEW 367
L++++ YASV+AIET++ DD+QWLTYWV S +TL ELTFA +IEW
Sbjct: 65071 LLNVSMARYASVQAIETQSHADDKQWLTYWVLYSLLTLIELTFAKLIEW 64925
Score = 33.1 bits (66), Expect(3) = 5e-037
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3 / -3
Query: 207 KSDDVXXAAERYIEQNXXXAFXXLISK 127
K DDV AAE+YI +N AF ++S+
Sbjct: 64680 KPDDVLTAAEKYIAENGPDAFEKILSR 64600
>gb|BP853930.1|BP853930 BP853930 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-59-O12 5',
mRNA sequence
Length = 392
Score = 152 bits (326), Expect = 2e-035
Identities = 58/86 (67%), Positives = 70/86 (81%)
Frame = -3 / +1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKVL NFDVLAGP++SL YPLYASV+AIET++ D++QWLTYWV S +TL EL
Sbjct: 133 GAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADEKQWLTYWVLYSLLTLIEL 312
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLP 313
TFA +IEWLP WSY KL C LV+P
Sbjct: 313 TFAKLIEWLPIWSYMKLILTCWLVIP 390
>emb|BX833330.1|CNS0A1U1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL45ZB03 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 791
Score = 149 bits (321), Expect = 8e-035
Identities = 59/100 (59%), Positives = 74/100 (74%)
Frame = -3 / +2
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G GS +KV+ NFDV+AGP+ISL YPLYASVRAIE+++ DD+QWLTYW S I LFEL
Sbjct: 86 GIGSLVKVIFKNFDVIAGPVISLVYPLYASVRAIESRSHGDDKQWLTYWALYSLIKLFEL 265
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
TF ++EW+P + YAKL LV P NG AY+Y+H+ R
Sbjct: 266 TFFRLLEWIPLYPYAKLALTSWLV*PGMNGAAYLYEHYVR 385
>gb|BP813131.1|BP813131 BP813131 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-05-H18 5',
mRNA sequence
Length = 404
Score = 149 bits (319), Expect = 1e-034
Identities = 58/100 (58%), Positives = 73/100 (73%)
Frame = -3 / +1
Query: 579 SKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITL 400
S G + L+VL NFDVLA PL++L YPLYASV+AIET++ +D+QWLTYWV + I+L
Sbjct: 103 SNSGDDNVLQVLIKNFDVLALPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISL 282
Query: 399 FELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDH 280
FELTF+ +EW P W Y KLF C LVLP FNG ++Y H
Sbjct: 283 FELTFSKPLEWFPIWPYMKLFGICGLVLPQFNGAEHIYKH 402
>gb|BP561351.2|BP561351 BP561351 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-82-H11 5',
mRNA sequence
Length = 401
Score = 143 bits (307), Expect = 6e-033
Identities = 57/98 (58%), Positives = 71/98 (72%)
Frame = -3 / +2
Query: 579 SKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITL 400
S G + L+VL NFDVLA PL++L YPLYASV+AIET++ +D+QWLTYWV + I+L
Sbjct: 104 SNSGDDNVLQVLIKNFDVLALPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISL 283
Query: 399 FELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVY 286
FELTF+ +EW P W Y KLF C LVLP FNG + Y
Sbjct: 284 FELTFSKPLEWFPIWPYMKLFGICWLVLPQFNGAEHXY 397
>gb|R30264.1|R30264 12869 Lambda-PRL2 Arabidopsis thaliana cDNA clone 159D22T7, mRNA
sequence
Length = 466
Score = 138 bits (295), Expect(2) = 1e-032
Identities = 53/77 (68%), Positives = 63/77 (81%)
Frame = -3 / +3
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKVL NFDVLAGP++SL YPLYASV+AIET++ DD+QWLTYWV S +T EL
Sbjct: 63 GAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTXIEL 242
Query: 390 TFAPIIEWLPFWSYAKL 340
TFA +IEWLP WSY L
Sbjct: 243 TFAKLIEWLPIWSYMXL 293
Score = 24.4 bits (47), Expect(2) = 1e-032
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3 / +1
Query: 324 LVLPWFNGXAYVYDHF 277
LV+ +F+G AY Y+ F
Sbjct: 310 LVIXYFSGAAYAYEPF 357
>emb|BX822007.1|CNS0A963 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL91ZF10 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 618
Score = 138 bits (296), Expect = 2e-031
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = -3 / +2
Query: 558 FLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAP 379
F+ +A FD L GP + L YPLYAS RAIE+ +DDQQWLTYW+ S IT+FEL+
Sbjct: 26 FIIAIAKRFDALVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWR 205
Query: 378 IIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
++ WLPFW Y KL F LVLP F+G AY+Y +F R
Sbjct: 206 VLAWLPFWPYLKLLFCMWLVLPMFSGAAYIYSNFVR 313
>emb|BX822073.1|CNS0A97P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL9ZG04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 827
Score = 138 bits (296), Expect = 2e-031
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = -3 / +2
Query: 558 FLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAP 379
F+ +A FD L GP + L YPLYAS RAIE+ +DDQQWLTYW+ S IT+FEL+
Sbjct: 251 FIIAIAKRFDALVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWR 430
Query: 378 IIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
++ WLPFW Y KL F LVLP F+G AY+Y +F R
Sbjct: 431 VLAWLPFWPYLKLLFCMWLVLPMFSGAAYIYSNFVR 538
>dbj|AK175397.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-83-H14
Length = 649
Score = 138 bits (296), Expect = 2e-031
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = -3 / +2
Query: 558 FLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAP 379
F+ +A FD L GP + L YPLYAS RAIE+ +DDQQWLTYW+ S IT+FEL+
Sbjct: 50 FIIAIAKRFDALVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWR 229
Query: 378 IIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
++ WLPFW Y KL F LVLP F+G AY+Y +F R
Sbjct: 230 VLAWLPFWPYLKLLFCMWLVLPMFSGAAYIYSNFVR 337
>ref|NM_129843.2| Arabidopsis thaliana unknown protein AT2G42820 mRNA, complete cds
Length = 843
Score = 138 bits (296), Expect = 2e-031
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = -3 / +2
Query: 558 FLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAP 379
F+ +A FD L GP + L YPLYAS RAIE+ +DDQQWLTYW+ S IT+FEL+
Sbjct: 251 FIIAIAKRFDALVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWR 430
Query: 378 IIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
++ WLPFW Y KL F LVLP F+G AY+Y +F R
Sbjct: 431 VLAWLPFWPYLKLLFCMWLVLPMFSGAAYIYSNFVR 538
>gb|BP855169.1|BP855169 BP855169 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-25-M04 5',
mRNA sequence
Length = 360
Score = 129 bits (277), Expect(2) = 2e-029
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -3 / +3
Query: 552 KVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPII 373
+ + FDVLAGP++SL YPLYASV+AIET++ DD+QWLTY V S +TL ELTFA +I
Sbjct: 105 RFFSGTFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYGVLYSLLTLIELTFAKLI 284
Query: 372 EWLPFWSYAKLFFNCXLVLP 313
EWLP WSY KL C LV+P
Sbjct: 285 EWLPIWSYMKLILTCWLVIP 344
Score = 22.1 bits (42), Expect(2) = 2e-029
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3 / +2
Query: 570 GSGSFLKVLANN 535
G+G+FLKVL N
Sbjct: 86 GAGNFLKVLLRN 121
>gb|BP826171.1|BP826171 BP826171 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-71-A13 5',
mRNA sequence
Length = 348
Score = 115 bits (246), Expect(2) = 1e-028
Identities = 47/70 (67%), Positives = 57/70 (81%)
Frame = -3 / +3
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKV NFDVLAGP++SL YPLYASV+AIET++ DD+Q LTY V S +TL EL
Sbjct: 51 GAGNFLKVFLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQGLTYGVLYSLLTLIEL 230
Query: 390 TFAPIIEWLP 361
TFA +IEWLP
Sbjct: 231 TFAKLIEWLP 260
Score = 33.6 bits (67), Expect(2) = 1e-028
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = -3 / +2
Query: 324 LVLPWFNGXAYVYDHF 277
L++P+F+G AYVY+HF
Sbjct: 299 LLIPYFSGAAYVYEHF 346
>gb|BX840742.1|BX840742 BX840742 Arabidopsis thaliana Silique Col-0 Arabidopsis thaliana
cDNA clone GSLTSIL68ZC05 5PRIM, mRNA sequence
Length = 677
Score = 127 bits (271), Expect = 6e-028
Identities = 49/76 (64%), Positives = 61/76 (80%)
Frame = -3 / +2
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+G+FLKVL FDVLAGP++SL YPLYASV+AI+T++ DD++WLTYWV S +TL L
Sbjct: 110 GAGNFLKVLLRYFDVLAGPVVSLVYPLYASVQAIDTQSHADDKKWLTYWVHYSLLTLIVL 289
Query: 390 TFAPIIEWLPFWSYAK 343
TFA +IEWLP WS K
Sbjct: 290 TFAKLIEWLPIWSNMK 337
>gb|AF290892.1|AF290892 Arabidopsis thaliana AtHVA22e mRNA, complete cds
Length = 589
Score = 121 bits (259), Expect = 3e-026
Identities = 47/88 (53%), Positives = 60/88 (68%)
Frame = -3 / +3
Query: 525 LAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYA 346
LAGP++ L YPLYASV AIE+ + VDD+QWL YW+ SF+TL EL ++EW+P W A
Sbjct: 78 LAGPVVMLLYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELILQSLLEWIPIWYTA 257
Query: 345 KLFFNCXLVLPWFNGXAYVYDHFXRPMF 262
KL F LVLP F G A++Y+ R F
Sbjct: 258 KLVFVAWLVLPQFRGAAFIYNKVVREQF 341
>gb|AY084933.1| Arabidopsis thaliana clone 121993 mRNA, complete sequence
Length = 596
Score = 121 bits (259), Expect = 3e-026
Identities = 47/88 (53%), Positives = 60/88 (68%)
Frame = -3 / +3
Query: 525 LAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYA 346
LAGP++ L YPLYASV AIE+ + VDD+QWL YW+ SF+TL EL ++EW+P W A
Sbjct: 90 LAGPVVMLLYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELILQSLLEWIPIWYTA 269
Query: 345 KLFFNCXLVLPWFNGXAYVYDHFXRPMF 262
KL F LVLP F G A++Y+ R F
Sbjct: 270 KLVFVAWLVLPQFRGAAFIYNKVVREQF 353
>emb|BX833604.1|CNS0A1S6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL65ZE09 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 644
Score = 121 bits (259), Expect = 3e-026
Identities = 47/88 (53%), Positives = 60/88 (68%)
Frame = -3 / +1
Query: 525 LAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYA 346
LAGP++ L YPLYASV AIE+ + VDD+QWL YW+ SF+TL EL ++EW+P W A
Sbjct: 82 LAGPVVMLLYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELILQSLLEWIPIWYTA 261
Query: 345 KLFFNCXLVLPWFNGXAYVYDHFXRPMF 262
KL F LVLP F G A++Y+ R F
Sbjct: 262 KLVFVAWLVLPQFRGAAFIYNKVVREQF 345
>ref|NM_124450.3| Arabidopsis thaliana ATHVA22E AT5G50720 (ATHVA22E) mRNA, complete
cds
Length = 647
Score = 121 bits (259), Expect = 3e-026
Identities = 47/88 (53%), Positives = 60/88 (68%)
Frame = -3 / +3
Query: 525 LAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYA 346
LAGP++ L YPLYASV AIE+ + VDD+QWL YW+ SF+TL EL ++EW+P W A
Sbjct: 90 LAGPVVMLLYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELILQSLLEWIPIWYTA 269
Query: 345 KLFFNCXLVLPWFNGXAYVYDHFXRPMF 262
KL F LVLP F G A++Y+ R F
Sbjct: 270 KLVFVAWLVLPQFRGAAFIYNKVVREQF 353
>gb|AI995946.1|AI995946 701549338 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701549338, mRNA sequence
Length = 557
Score = 121 bits (258), Expect = 4e-026
Identities = 47/88 (53%), Positives = 60/88 (68%)
Frame = -3 / -3
Query: 525 LAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYA 346
LAGP++ L YPLYASV AIE+ + VDD+QWL YW+ SF+TL EL ++EW+P W A
Sbjct: 480 LAGPVVMLLYPLYASVIAIESPSXVDDEQWLAYWILYSFLTLSELILQSLLEWIPIWYTA 301
Query: 345 KLFFNCXLVLPWFNGXAYVYDHFXRPMF 262
KL F LVLP F G A++Y+ R F
Sbjct: 300 KLVFVAWLVLPQFRGAAFIYNKVVREQF 217
>gb|BP868176.1|BP868176 BP868176 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-83-H14 5',
mRNA sequence
Length = 382
Score = 91.3 bits (193), Expect(2) = 4e-025
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = -3 / +1
Query: 558 FLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAP 379
F+ +A D L GP + L YPLYAS RAIE+ +DDQQWLTYW+ S IT+FEL+
Sbjct: 49 FIIAIAKRLDALVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWR 228
Query: 378 IIEWLPF 358
++ WL F
Sbjct: 229 VLAWLHF 249
Score = 46.0 bits (94), Expect(2) = 4e-025
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = -3 / +3
Query: 360 FWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
FW Y KL F LVLP F+G AY+Y +F R
Sbjct: 246 FWPYLKLLFCMWLVLPMFSGAAYIYSNFVR 335
>gb|BP859440.1|BP859440 BP859440 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-40-K24 5',
mRNA sequence
Length = 392
Score = 117 bits (250), Expect = 5e-025
Identities = 45/85 (52%), Positives = 60/85 (70%)
Frame = -3 / +1
Query: 516 PLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYAKLF 337
PL++L YPLYASV+AIET++ +D+QWLTYWV + I+LFELTF+ +EW + LF
Sbjct: 130 PLVTLVYPLYASVKAIETRSLTEDEQWLTYWVLYALISLFELTFSKPLEWFLYGHT*SLF 309
Query: 336 FNCXLVLPWFNGXAYVYDHFXRPMF 262
C LVLP F G ++Y HF RP +
Sbjct: 310 GICWLVLPKFKGAEHIYKHFIRPFY 384
>gb|BP819733.1|BP819733 BP819733 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-52-E09 5',
mRNA sequence
Length = 386
Score = 116 bits (248), Expect = 9e-025
Identities = 44/102 (43%), Positives = 63/102 (61%)
Frame = -3 / +1
Query: 522 AGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYAK 343
AGP++ L YPLYASV A+E+ VDD+QWL YW+ SF++L EL +IEW+P W K
Sbjct: 28 AGPIVMLLYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELILQSLIEWIPIWYTVK 207
Query: 342 LFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYIXRNE 217
L F LVLP F G A++Y+ R F ++ ++ ++
Sbjct: 208 LVFVAWLVLPQFQGAAFIYNRVVREQFKKHGVLRSTHLQAHQ 333
>gb|BE037936.1|BE037936 AA06F11 AA Arabidopsis thaliana cDNA 5', mRNA sequence
Length = 702
Score = 116 bits (247), Expect = 1e-024
Identities = 44/87 (50%), Positives = 57/87 (65%)
Frame = -3 / +3
Query: 522 AGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYAK 343
AGP++ L YPLYASV A+E+ VDD+QWL YW+ SF++L EL +IEW+P W K
Sbjct: 126 AGPIVMLLYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELILQSLIEWIPIWYTVK 305
Query: 342 LFFNCXLVLPWFNGXAYVYDHFXRPMF 262
L F LVLP F G A++Y+ R F
Sbjct: 306 LVFVAWLVLPQFQGAAFIYNRVVREQF 386
>gb|CF651570.1|CF651570 13-L020577-066-004-I03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001I034Q 5-PRIME, mRNA sequence
Length = 720
Score = 116 bits (247), Expect = 1e-024
Identities = 44/87 (50%), Positives = 57/87 (65%)
Frame = -3 / +3
Query: 522 AGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYAK 343
AGP++ L YPLYASV A+E+ VDD+QWL YW+ SF++L EL +IEW+P W K
Sbjct: 123 AGPIVMLLYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELILQSLIEWIPIWYTVK 302
Query: 342 LFFNCXLVLPWFNGXAYVYDHFXRPMF 262
L F LVLP F G A++Y+ R F
Sbjct: 303 LVFVAWLVLPQFQGAAFIYNRVVREQF 383
>gb|AV552520.1|AV552520 AV552520 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ31h12R 5', mRNA sequence
Length = 567
Score = 116 bits (247), Expect = 1e-024
Identities = 44/87 (50%), Positives = 57/87 (65%)
Frame = -3 / +2
Query: 522 AGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYAK 343
AGP++ L YPLYASV A+E+ VDD+QWL YW+ SF++L EL +IEW+P W K
Sbjct: 140 AGPIVMLLYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELILQSLIEWIPIWYTVK 319
Query: 342 LFFNCXLVLPWFNGXAYVYDHFXRPMF 262
L F LVLP F G A++Y+ R F
Sbjct: 320 LVFVAWLVLPQFQGAAFIYNRVVREQF 400
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,268,975,608
Number of Sequences: 1013581
Number of extensions: 16610689
Number of successful extensions: 155415
Number of sequences better than 1.0e-020: 70
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 53675906372
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)