TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950080.2.1
(687 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU238436.1|AU238436 AU238436 RAFL17 Arabidopsis thaliana... 264 1e-069
gb|BU635703.1|BU635703 031H02 Infected Arabidopsis Leaf Ara... 264 1e-069
gb|AV537618.1|AV537618 AV537618 Arabidopsis thaliana roots ... 264 1e-069
gb|CK117563.1|CK117563 215n18.p1 AtM1 Arabidopsis thaliana ... 264 1e-069
gb|AY079019.1| Arabidopsis thaliana AT5g60340/k9b18_30 mRNA... 264 1e-069
gb|AY093748.1| Arabidopsis thaliana AT5g60340/k9b18_30 mRNA... 264 1e-069
dbj|AK117598.1| Arabidopsis thaliana At5g60345 mRNA for unk... 264 1e-069
gb|CK118751.1|CK118751 216a17.p1 AtM1 Arabidopsis thaliana ... 264 3e-069
gb|AV534827.1|AV534827 AV534827 Arabidopsis thaliana flower... 257 3e-067
gb|AI998412.1|AI998412 701545602 A. thaliana, Columbia Col-... 204 5e-059
gb|AV822050.1|AV822050 AV822050 RAFL4 Arabidopsis thaliana ... 228 1e-058
dbj|AB015471.1| Arabidopsis thaliana genomic DNA, chromosom... 102 4e-058
gb|AV549600.1|AV549600 AV549600 Arabidopsis thaliana roots ... 218 2e-055
ref|NM_125427.1| Arabidopsis thaliana oxidoreductase AT5G60... 165 5e-052
gb|AV557935.1|AV557935 AV557935 Arabidopsis thaliana green ... 197 3e-049
gb|BP560457.2|BP560457 BP560457 RAFL2 Arabidopsis thaliana ... 167 6e-044
gb|BP609905.1|BP609905 BP609905 RAFL16 Arabidopsis thaliana... 177 3e-043
gb|AV787853.1|AV787853 AV787853 RAFL6 Arabidopsis thaliana ... 169 1e-040
gb|BP598587.1|BP598587 BP598587 RAFL16 Arabidopsis thaliana... 165 1e-039
gb|BP565801.1|BP565801 BP565801 RAFL14 Arabidopsis thaliana... 151 2e-035
gb|BP633309.1|BP633309 BP633309 RAFL17 Arabidopsis thaliana... 149 1e-034
gb|BP856666.1|BP856666 BP856666 RAFL21 Arabidopsis thaliana... 71 1e-028
gb|AU229622.1|AU229622 AU229622 RAFL17 Arabidopsis thaliana... 121 3e-026
gb|BP837909.1|BP837909 BP837909 RAFL19 Arabidopsis thaliana... 114 3e-024
gb|BP667652.1|BP667652 BP667652 RAFL21 Arabidopsis thaliana... 50 5e-021
>gb|AU238436.1|AU238436 AU238436 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-24-H04 5',
mRNA sequence
Length = 629
Score = 264 bits (572), Expect = 1e-069
Identities = 101/169 (59%), Positives = 129/169 (76%)
Frame = +2 / +3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 81 RRERPNLLITGTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 260
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN
Sbjct: 261 SVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNN 440
Query: 392 IECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
++CE++QVLLEEA +SY E+IV L+S+ +EDIS NV LTDW+N W+P
Sbjct: 441 LQCEMYQVLLEEAHDSYDEEIVTELQSNTIEDISNNVSTLTDWINAWQP 587
Score = 83.5 bits (176), Expect(2) = 1e-022
Identities = 38/117 (32%), Positives = 70/117 (59%)
Frame = -3 / -1
Query: 532 PIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSAR 353
P + P+ Q + +I VT + + L + + E L FAL VV +LG+ +T R
Sbjct: 581 PCINPIRQSGDIVRDIFDCVTL*FSDNFLIITVMCFFE*DLIHFALKVVTKLGS*ITPIR 402
Query: 352 QAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
++QN V+ +H+ +KP+ KE+T++V++ +F+H ++KL+ H+V VD++ LE+
Sbjct: 401 *TVIQNGVLGSKHDNAIKPSLRKEVTAMVVHNVPSFYHSIVKLINHRVFVDEVTLEL 231
Score = 45.1 bits (92), Expect(2) = 1e-022
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = -1 / -2
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
LM HS S SQP * FS TRSPM +RR ASAR+E
Sbjct: 253 LMK*HSSSLSQPW*NSFSLTRSPMQIYRRFVASARAE 143
>gb|BU635703.1|BU635703 031H02 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 640
Score = 264 bits (572), Expect = 1e-069
Identities = 101/169 (59%), Positives = 129/169 (76%)
Frame = +2 / +1
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 82 RRERPNLLITGTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 261
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN
Sbjct: 262 SVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNN 441
Query: 392 IECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
++CE++QVLLEEA +SY E+IV L+S+ +EDIS NV LTDW+N W+P
Sbjct: 442 LQCEMYQVLLEEAHDSYDEEIVTELQSNTIEDISNNVSTLTDWINAWQP 588
Score = 83.5 bits (176), Expect(2) = 1e-022
Identities = 38/117 (32%), Positives = 70/117 (59%)
Frame = -3 / -2
Query: 532 PIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSAR 353
P + P+ Q + +I VT + + L + + E L FAL VV +LG+ +T R
Sbjct: 582 PCINPIRQSGDIVRDIFDCVTL*FSDNFLIITVMCFFE*DLIHFALKVVTKLGS*ITPIR 403
Query: 352 QAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
++QN V+ +H+ +KP+ KE+T++V++ +F+H ++KL+ H+V VD++ LE+
Sbjct: 402 *TVIQNGVLGSKHDNAIKPSLRKEVTAMVVHNVPSFYHSIVKLINHRVFVDEVTLEL 232
Score = 45.1 bits (92), Expect(2) = 1e-022
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = -1 / -3
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
LM HS S SQP * FS TRSPM +RR ASAR+E
Sbjct: 254 LMK*HSSSLSQPW*NSFSLTRSPMQIYRRFVASARAE 144
>gb|AV537618.1|AV537618 AV537618 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09h02F 3', mRNA sequence
Length = 639
Score = 264 bits (572), Expect = 1e-069
Identities = 102/169 (60%), Positives = 130/169 (76%)
Frame = +2 / -2
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 593 RRERPNLLITXTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 414
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN
Sbjct: 413 SVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNN 234
Query: 392 IECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
++CE++QVLLEEA +SY E+IV L+S+ +EDIS NV LTDW+N W+P
Sbjct: 233 LQCEMYQVLLEEAHDSYDEEIVTELQSNTIEDISNNVSTLTDWINAWQP 87
Score = 83.5 bits (176), Expect(2) = 1e-022
Identities = 38/117 (32%), Positives = 70/117 (59%)
Frame = -3 / +3
Query: 532 PIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSAR 353
P + P+ Q + +I VT + + L + + E L FAL VV +LG+ +T R
Sbjct: 93 PCINPIRQSGDIVRDIFDCVTL*FSDNFLIITVMCFFE*DLIHFALKVVTKLGS*ITPIR 272
Query: 352 QAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
++QN V+ +H+ +KP+ KE+T++V++ +F+H ++KL+ H+V VD++ LE+
Sbjct: 273 *TVIQNGVLGSKHDNAIKPSLRKEVTAMVVHNVPSFYHSIVKLINHRVFVDEVTLEL 443
Score = 45.1 bits (92), Expect(2) = 1e-022
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = -1 / +1
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
LM HS S SQP * FS TRSPM +RR ASAR+E
Sbjct: 421 LMK*HSSSLSQPW*NSFSLTRSPMQIYRRFVASARAE 531
>gb|CK117563.1|CK117563 215n18.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011N18215
5-PRIME, mRNA sequence
Length = 664
Score = 264 bits (572), Expect = 1e-069
Identities = 101/169 (59%), Positives = 129/169 (76%)
Frame = +2 / +3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 90 RRERPNLLITGTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 269
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN
Sbjct: 270 SVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNN 449
Query: 392 IECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
++CE++QVLLEEA +SY E+IV L+S+ +EDIS NV LTDW+N W+P
Sbjct: 450 LQCEMYQVLLEEAHDSYDEEIVTELQSNTIEDISNNVSTLTDWINAWQP 596
Score = 83.5 bits (176), Expect(2) = 1e-022
Identities = 38/117 (32%), Positives = 70/117 (59%)
Frame = -3 / -3
Query: 532 PIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSAR 353
P + P+ Q + +I VT + + L + + E L FAL VV +LG+ +T R
Sbjct: 590 PCINPIRQSGDIVRDIFDCVTL*FSDNFLIITVMCFFE*DLIHFALKVVTKLGS*ITPIR 411
Query: 352 QAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
++QN V+ +H+ +KP+ KE+T++V++ +F+H ++KL+ H+V VD++ LE+
Sbjct: 410 *TVIQNGVLGSKHDNAIKPSLRKEVTAMVVHNVPSFYHSIVKLINHRVFVDEVTLEL 240
Score = 45.1 bits (92), Expect(2) = 1e-022
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = -1 / -1
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
LM HS S SQP * FS TRSPM +RR ASAR+E
Sbjct: 262 LMK*HSSSLSQPW*NSFSLTRSPMQIYRRFVASARAE 152
>gb|AY079019.1| Arabidopsis thaliana AT5g60340/k9b18_30 mRNA, complete cds
Length = 789
Score = 264 bits (572), Expect = 1e-069
Identities = 101/169 (59%), Positives = 129/169 (76%)
Frame = +2 / +3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 144 RRERPNLLITGTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 323
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN
Sbjct: 324 SVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNN 503
Query: 392 IECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
++CE++QVLLEEA +SY E+IV L+S+ +EDIS NV LTDW+N W+P
Sbjct: 504 LQCEMYQVLLEEAHDSYDEEIVTELQSNTIEDISNNVSTLTDWINAWQP 650
Score = 83.5 bits (176), Expect(2) = 1e-022
Identities = 38/117 (32%), Positives = 70/117 (59%)
Frame = -3 / -2
Query: 532 PIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSAR 353
P + P+ Q + +I VT + + L + + E L FAL VV +LG+ +T R
Sbjct: 644 PCINPIRQSGDIVRDIFDCVTL*FSDNFLIITVMCFFE*DLIHFALKVVTKLGS*ITPIR 465
Query: 352 QAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
++QN V+ +H+ +KP+ KE+T++V++ +F+H ++KL+ H+V VD++ LE+
Sbjct: 464 *TVIQNGVLGSKHDNAIKPSLRKEVTAMVVHNVPSFYHSIVKLINHRVFVDEVTLEL 294
Score = 45.1 bits (92), Expect(2) = 1e-022
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = -1 / -3
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
LM HS S SQP * FS TRSPM +RR ASAR+E
Sbjct: 316 LMK*HSSSLSQPW*NSFSLTRSPMQIYRRFVASARAE 206
>gb|AY093748.1| Arabidopsis thaliana AT5g60340/k9b18_30 mRNA, complete cds
Length = 537
Score = 264 bits (572), Expect = 1e-069
Identities = 101/169 (59%), Positives = 129/169 (76%)
Frame = +2 / +1
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 28 RRERPNLLITGTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 207
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN
Sbjct: 208 SVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNN 387
Query: 392 IECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
++CE++QVLLEEA +SY E+IV L+S+ +EDIS NV LTDW+N W+P
Sbjct: 388 LQCEMYQVLLEEAHDSYDEEIVTELQSNTIEDISNNVSTLTDWINAWQP 534
Score = 83.5 bits (176), Expect(2) = 1e-022
Identities = 38/117 (32%), Positives = 70/117 (59%)
Frame = -3 / -1
Query: 532 PIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSAR 353
P + P+ Q + +I VT + + L + + E L FAL VV +LG+ +T R
Sbjct: 528 PCINPIRQSGDIVRDIFDCVTL*FSDNFLIITVMCFFE*DLIHFALKVVTKLGS*ITPIR 349
Query: 352 QAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
++QN V+ +H+ +KP+ KE+T++V++ +F+H ++KL+ H+V VD++ LE+
Sbjct: 348 *TVIQNGVLGSKHDNAIKPSLRKEVTAMVVHNVPSFYHSIVKLINHRVFVDEVTLEL 178
Score = 45.1 bits (92), Expect(2) = 1e-022
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = -1 / -2
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
LM HS S SQP * FS TRSPM +RR ASAR+E
Sbjct: 200 LMK*HSSSLSQPW*NSFSLTRSPMQIYRRFVASARAE 90
>dbj|AK117598.1| Arabidopsis thaliana At5g60345 mRNA for unknown protein, complete
cds, clone: RAFL17-24-H04
Length = 727
Score = 264 bits (572), Expect = 1e-069
Identities = 101/169 (59%), Positives = 129/169 (76%)
Frame = +2 / +3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 81 RRERPNLLITGTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 260
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN
Sbjct: 261 SVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNN 440
Query: 392 IECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
++CE++QVLLEEA +SY E+IV L+S+ +EDIS NV LTDW+N W+P
Sbjct: 441 LQCEMYQVLLEEAHDSYDEEIVTELQSNTIEDISNNVSTLTDWINAWQP 587
Score = 83.5 bits (176), Expect(2) = 1e-022
Identities = 38/117 (32%), Positives = 70/117 (59%)
Frame = -3 / -3
Query: 532 PIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSAR 353
P + P+ Q + +I VT + + L + + E L FAL VV +LG+ +T R
Sbjct: 581 PCINPIRQSGDIVRDIFDCVTL*FSDNFLIITVMCFFE*DLIHFALKVVTKLGS*ITPIR 402
Query: 352 QAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
++QN V+ +H+ +KP+ KE+T++V++ +F+H ++KL+ H+V VD++ LE+
Sbjct: 401 *TVIQNGVLGSKHDNAIKPSLRKEVTAMVVHNVPSFYHSIVKLINHRVFVDEVTLEL 231
Score = 45.1 bits (92), Expect(2) = 1e-022
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = -1 / -1
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
LM HS S SQP * FS TRSPM +RR ASAR+E
Sbjct: 253 LMK*HSSSLSQPW*NSFSLTRSPMQIYRRFVASARAE 143
>gb|CK118751.1|CK118751 216a17.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011A17216
5-PRIME, mRNA sequence
Length = 643
Score = 264 bits (570), Expect = 3e-069
Identities = 101/169 (59%), Positives = 128/169 (75%)
Frame = +2 / +3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 90 RRERPNLLITGTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 269
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN
Sbjct: 270 SVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNN 449
Query: 392 IECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
++CE++QVLLEEA +SY E+IV L+S+ +EDIS NV LTDW+N W P
Sbjct: 450 LQCEMYQVLLEEAHDSYDEEIVTELQSNTIEDISNNVSTLTDWINAWAP 596
Score = 83.5 bits (176), Expect(2) = 1e-022
Identities = 38/117 (32%), Positives = 70/117 (59%)
Frame = -3 / -3
Query: 532 PIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSAR 353
P + P+ Q + +I VT + + L + + E L FAL VV +LG+ +T R
Sbjct: 590 PCINPIRQSGDIVRDIFDCVTL*FSDNFLIITVMCFFE*DLIHFALKVVTKLGS*ITPIR 411
Query: 352 QAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
++QN V+ +H+ +KP+ KE+T++V++ +F+H ++KL+ H+V VD++ LE+
Sbjct: 410 *TVIQNGVLGSKHDNAIKPSLRKEVTAMVVHNVPSFYHSIVKLINHRVFVDEVTLEL 240
Score = 45.1 bits (92), Expect(2) = 1e-022
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = -1 / -1
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
LM HS S SQP * FS TRSPM +RR ASAR+E
Sbjct: 262 LMK*HSSSLSQPW*NSFSLTRSPMQIYRRFVASARAE 152
>gb|AV534827.1|AV534827 AV534827 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB086f01F 3', mRNA sequence
Length = 616
Score = 257 bits (555), Expect = 3e-067
Identities = 99/165 (60%), Positives = 126/165 (76%)
Frame = +2 / +3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 117 RRERPNLLITGTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 296
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN
Sbjct: 297 SVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNN 476
Query: 392 IECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVN 526
++CE++QVLLEEA +SY E+IV L+S+ +EDIS NV LTDW+N
Sbjct: 477 LQCEMYQVLLEEAHDSYDEEIVTELQSNTIEDISNNVSTLTDWIN 611
Score = 80.8 bits (170), Expect(2) = 8e-022
Identities = 37/115 (32%), Positives = 69/115 (60%)
Frame = -3 / -3
Query: 526 VYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQA 347
+ P+ Q + +I VT + + L + + E L FAL VV +LG+ +T R
Sbjct: 611 INPIRQSGDIVRDIFDCVTL*FSDNFLIITVMCFFE*DLIHFALKVVTKLGS*ITPIR*T 432
Query: 346 IMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
++QN V+ +H+ +KP+ KE+T++V++ +F+H ++KL+ H+V VD++ LE+
Sbjct: 431 VIQNGVLGSKHDNAIKPSLRKEVTAMVVHNVPSFYHSIVKLINHRVFVDEVTLEL 267
Score = 45.1 bits (92), Expect(2) = 8e-022
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = -1 / -1
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
LM HS S SQP * FS TRSPM +RR ASAR+E
Sbjct: 289 LMK*HSSSLSQPW*NSFSLTRSPMQIYRRFVASARAE 179
>gb|AI998412.1|AI998412 701545602 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701545602, mRNA sequence
Length = 558
Score = 204 bits (440), Expect(2) = 5e-059
Identities = 78/118 (66%), Positives = 98/118 (83%)
Frame = +2 / -1
Query: 185 LECHVINEDLVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRG 364
LECH INED V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT RG
Sbjct: 459 LECHFINEDSVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNRG 280
Query: 365 YMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
Y G+KL+NN++CE++QVLLEEA +SY E+IV L+S+ +EDIS NV LT +N W+P
Sbjct: 279 YSGTKLSNNLQCEMYQVLLEEAHDSYDEEIVTELQSNTIEDISNNVSTLTXLINAWQP 106
Score = 46.0 bits (94), Expect(2) = 5e-059
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2 / -2
Query: 95 SLLADAAGLRHVNIGDLVREKSLHDGWDAD 184
S LA+A LR++ IGDLV+EK + GWD D
Sbjct: 548 SXLAEATNLRYIXIGDLVKEKEFYHGWDND 459
>gb|AV822050.1|AV822050 AV822050 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-20-G23 5',
mRNA sequence
Length = 615
Score = 228 bits (493), Expect = 1e-058
Identities = 89/153 (58%), Positives = 115/153 (75%)
Frame = +2 / +1
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 145 RRERPNLLITGTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 324
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN
Sbjct: 325 SVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNN 504
Query: 392 IECEIFQVLLEEARESYREDIVMPLRSDNVEDI 490
++CE++QVLLEEA +SY E+IV L+ + + DI
Sbjct: 505 LQCEMYQVLLEEAHDSYDEEIVTELQXNTI*DI 603
>dbj|AB015471.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9B18
Length = 10085
Score = 102 bits (217), Expect(3) = 4e-058
Identities = 37/60 (61%), Positives = 50/60 (83%)
Frame = +2 / -3
Query: 359 RGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
RGY G+KL+NN++CE++QVLLEEA +SY E+IV L+S+ +EDIS NV LTDW+N W+P
Sbjct: 5865 RGYSGTKLSNNLQCEMYQVLLEEAHDSYDEEIVTELQSNTIEDISNNVSTLTDWINAWQP 5686
Score = 98.2 bits (208), Expect(3) = 4e-058
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = +2 / -2
Query: 209 DLVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGR 361
D V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT R
Sbjct: 6103 DQVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNR 5951
Score = 76.2 bits (160), Expect(3) = 4e-058
Identities = 30/62 (48%), Positives = 38/62 (61%)
Frame = +2 / -1
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 6449 RRERPNLLITGTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 6270
Query: 212 LV 217
V
Sbjct: 6269 SV 6264
>gb|AV549600.1|AV549600 AV549600 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09h02R 5', mRNA sequence
Length = 558
Score = 218 bits (470), Expect = 2e-055
Identities = 84/139 (60%), Positives = 106/139 (76%)
Frame = +2 / +1
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 142 RRERPNLLITGTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 321
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN
Sbjct: 322 SVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNN 501
Query: 392 IECEIFQVLLEEARESYRE 448
++CE++QVLLEEA +SY E
Sbjct: 502 LQCEMYQVLLEEAHDSYDE 558
>ref|NM_125427.1| Arabidopsis thaliana oxidoreductase AT5G60340 mRNA, complete cds
Length = 1014
Score = 165 bits (355), Expect(2) = 5e-052
Identities = 64/108 (59%), Positives = 79/108 (73%)
Frame = +2 / +1
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 28 RRERPNLLITGTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 207
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLT 355
V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT
Sbjct: 208 SVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLT 351
Score = 61.6 bits (128), Expect(2) = 5e-052
Identities = 23/37 (62%), Positives = 32/37 (86%)
Frame = +2 / +3
Query: 359 RGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLR 469
RGY G+KL+NN++CE++QVLLEEA +SY E+IV L+
Sbjct: 393 RGYSGTKLSNNLQCEMYQVLLEEAHDSYDEEIVTELQ 503
>gb|AV557935.1|AV557935 AV557935 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ084f05F 3', mRNA sequence
Length = 475
Score = 197 bits (425), Expect = 3e-049
Identities = 74/111 (66%), Positives = 94/111 (84%)
Frame = +2 / -1
Query: 206 EDLVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLA 385
ED V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+
Sbjct: 475 EDSVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLS 296
Query: 386 NNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
NN++CE++QVLLEEA +SY E+IV L+S+ +EDIS NV LTDW+N W+P
Sbjct: 295 NNLQCEMYQVLLEEAHDSYDEEIVTELQSNTIEDISNNVSTLTDWINAWQP 143
>gb|BP560457.2|BP560457 BP560457 RAFL2 Arabidopsis thaliana cDNA clone RAFL02-08-D01 5',
mRNA sequence
Length = 707
Score = 167 bits (360), Expect(2) = 6e-044
Identities = 65/110 (59%), Positives = 80/110 (72%)
Frame = +2 / +3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 192 RRERPNLLITGTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 371
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGR 361
V DEL+D M EGG +VDYHGCDFFP+RWFD VVVL+T+NS+L+DRLT R
Sbjct: 372 SVIDELDDAMIEGGNIVDYHGCDFFPQRWFDRVVVLRTENSVLYDRLTNR 521
Score = 32.2 bits (64), Expect(2) = 6e-044
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +2 / +1
Query: 359 RGYMGSKLANNIECE 403
RGY G+KL+NN++CE
Sbjct: 607 RGYSGTKLSNNLQCE 651
>gb|BP609905.1|BP609905 BP609905 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-09-C20 3',
mRNA sequence
Length = 438
Score = 177 bits (381), Expect = 3e-043
Identities = 64/98 (65%), Positives = 84/98 (85%)
Frame = +2 / -3
Query: 245 EGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIECEIFQVLLE 424
EGG ++DYHGCDFFP+RWFD V VL+T+NS+L+DRLT RGY G+KL+NN++CE++QVLLE
Sbjct: 436 EGGNILDYHGCDFFPQRWFDRVFVLRTENSVLYDRLTNRGYSGTKLSNNLQCEMYQVLLE 257
Query: 425 EARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
EA +SY E+IV L+S+ +EDIS NV LTDW+N W+P
Sbjct: 256 EAHDSYDEEIVTELQSNTIEDISNNVSTLTDWINAWQP 143
>gb|AV787853.1|AV787853 AV787853 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-77-E07 3',
mRNA sequence
Length = 412
Score = 169 bits (363), Expect = 1e-040
Identities = 61/91 (67%), Positives = 79/91 (86%)
Frame = +2 / -2
Query: 266 YHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYR 445
YHGCDFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN++CE++QVLLEEA +SY
Sbjct: 411 YHGCDFFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNNLQCEMYQVLLEEAHDSYD 232
Query: 446 EDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
E+IV L+S+ +EDIS NV LTDW+N W+P
Sbjct: 231 EEIVTELQSNTIEDISNNVSTLTDWINAWQP 139
>gb|BP598587.1|BP598587 BP598587 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-03-P15 3',
mRNA sequence
Length = 412
Score = 165 bits (355), Expect = 1e-039
Identities = 60/90 (66%), Positives = 78/90 (86%)
Frame = +2 / -1
Query: 269 HGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYRE 448
HGCDFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN++CE++QVLLEEA +SY E
Sbjct: 412 HGCDFFPKRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNNLQCEMYQVLLEEAHDSYDE 233
Query: 449 DIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
+IV L+S+ +EDIS NV LTDW+N W+P
Sbjct: 232 EIVTELQSNTIEDISNNVSTLTDWINAWQP 143
>gb|BP565801.1|BP565801 BP565801 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-51-G02 3',
mRNA sequence
Length = 400
Score = 151 bits (325), Expect = 2e-035
Identities = 56/87 (64%), Positives = 74/87 (85%)
Frame = +2 / -2
Query: 278 DFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYREDIV 457
DFFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN++CE++QVLLEEA +SY E+IV
Sbjct: 399 DFFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNNLQCEMYQVLLEEAHDSYDEEIV 220
Query: 458 MPLRSDNVEDISRNVGALTDWVNNWRP 538
L S+ +EDIS +V LTDW+N W+P
Sbjct: 219 TELPSNTIEDISNHVSTLTDWINAWQP 139
>gb|BP633309.1|BP633309 BP633309 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-30-E24 3',
mRNA sequence
Length = 396
Score = 149 bits (319), Expect = 1e-034
Identities = 54/86 (62%), Positives = 73/86 (84%)
Frame = +2 / -1
Query: 281 FFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYREDIVM 460
FFP+RWFD VVVL+T+NS+L+DRLT RGY G+KL+NN++CE++QVLLEEA ++Y E+IV
Sbjct: 396 FFPQRWFDRVVVLRTENSVLYDRLTNRGYSGTKLSNNLQCEMYQVLLEEAHDTYDEEIVT 217
Query: 461 PLRSDNVEDISRNVGALTDWVNNWRP 538
L+S+ +EDIS N LTDW+N W+P
Sbjct: 216 ELQSNTIEDISNNFSTLTDWINAWQP 139
>gb|BP856666.1|BP856666 BP856666 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-30-N21 5',
mRNA sequence
Length = 415
Score = 71.2 bits (149), Expect(3) = 1e-028
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +2 / +2
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH IN
Sbjct: 80 RRERPNLLIRGTRGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINRR 259
Query: 212 L 214
L
Sbjct: 260 L 262
Score = 54.2 bits (112), Expect(3) = 1e-028
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +2 / +2
Query: 281 FFPERWFDLVVVLQTDNSILHDRLTGRG 364
FF +RWFD VVVL+T+NS+L+DRLT RG
Sbjct: 332 FFRQRWFDRVVVLRTENSVLYDRLTNRG 415
Score = 40.9 bits (83), Expect(3) = 1e-028
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2 / +3
Query: 206 EDLVCDELEDMMEEGGILVDYHG 274
ED V DEL+D M EGG +VDYHG
Sbjct: 255 EDSVMDELDDAMIEGGNIVDYHG 323
>gb|AU229622.1|AU229622 AU229622 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-24-H04 3',
mRNA sequence
Length = 356
Score = 121 bits (258), Expect = 3e-026
Identities = 44/71 (61%), Positives = 60/71 (84%)
Frame = +2 / -3
Query: 326 DNSILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVG 505
+NS+L+DRLT RGY G+KL+NN++CE++QVLLEEA +SY E+IV L+S+ +EDIS NV
Sbjct: 354 ENSVLYDRLTNRGYSGTKLSNNLQCEMYQVLLEEAHDSYDEEIVTELQSNTIEDISNNVS 175
Query: 506 ALTDWVNNWRP 538
LTDW+N W+P
Sbjct: 174 TLTDWINAWQP 142
>gb|BP837909.1|BP837909 BP837909 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-22-E01 5',
mRNA sequence
Length = 382
Score = 114 bits (244), Expect = 3e-024
Identities = 45/83 (54%), Positives = 55/83 (66%)
Frame = +2 / +1
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPN+L+ S LA+A LR++ IGDLV+EK + GWD +LECH INED
Sbjct: 133 RRERPNLLIRGTPGTGKSTTASALAEATNLRYICIGDLVKEKEFYHGWDNELECHFINED 312
Query: 212 LVCDELEDMMEEGGILVDYHGCD 280
V DEL+D M EGG +VDYHGCD
Sbjct: 313 SVIDELDDAMIEGGNIVDYHGCD 381
>gb|BP667652.1|BP667652 BP667652 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-24-B22 3',
mRNA sequence
Length = 400
Score = 50.1 bits (103), Expect(3) = 5e-021
Identities = 18/31 (58%), Positives = 27/31 (87%)
Frame = +2 / -3
Query: 362 GYMGSKLANNIECEIFQVLLEEARESYREDI 454
GY G+KL+NN++ E++QVLLEEA +SY E++
Sbjct: 326 GYSGTKLSNNLQFEMYQVLLEEAHDSYDEEL 234
Score = 46.9 bits (96), Expect(3) = 5e-021
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +2 / -2
Query: 287 PERWFDLVVVLQTDNSILHDRLT 355
P RWFD VVVL+T+NS+L+DRLT
Sbjct: 399 PHRWFDRVVVLRTENSVLYDRLT 331
Score = 43.7 bits (89), Expect(3) = 5e-021
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2 / -2
Query: 452 IVMPLRSDNVEDISRNVGALTDWVNNWRP 538
IV L S+ +EDIS +V +TDW+N W+P
Sbjct: 237 IVTELPSNTIEDISNHVSTVTDWINPWQP 151
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,098,107,928
Number of Sequences: 1013581
Number of extensions: 13069059
Number of successful extensions: 110707
Number of sequences better than 1.0e-020: 29
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 42771366955
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)