TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943966.2.1
(599 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV782400.1|AV782400 AV782400 RAFL4 Arabidopsis thaliana ... 182 1e-044
gb|CF652643.1|CF652643 68-L020135w-066-001-G17-SP6P MPIZ-AD... 182 1e-044
gb|AY057554.1| Arabidopsis thaliana AT4g34050/F28A23_190 mR... 182 1e-044
gb|AY062630.1| Arabidopsis thaliana Phosphoglycerate dehydr... 182 1e-044
gb|AY081457.1| Arabidopsis thaliana phosphoglycerate dehydr... 182 1e-044
emb|BX826590.1|CNS0A35S Arabidopsis thaliana Full-length cD... 182 1e-044
emb|BX828287.1|CNS0A315 Arabidopsis thaliana Full-length cD... 182 1e-044
ref|NM_119566.3| Arabidopsis thaliana O-methyltransferase/ ... 182 1e-044
gb|AY143979.1| Arabidopsis thaliana At4g34050/F28A23_190 mR... 181 2e-044
emb|CQ804646.1| Sequence 1057 from Patent WO2004035798 181 2e-044
emb|CQ805684.1| Sequence 2095 from Patent WO2004035798 181 2e-044
gb|BE844710.1|BE844710 AD01C10T7 AD A. thaliana (Col-0 gl1)... 180 4e-044
gb|AV538609.1|AV538609 AV538609 Arabidopsis thaliana roots ... 179 5e-044
gb|AY088577.1| Arabidopsis thaliana clone 8049 mRNA, comple... 178 1e-043
gb|AV538779.1|AV538779 AV538779 Arabidopsis thaliana roots ... 175 1e-042
gb|AV543668.1|AV543668 AV543668 Arabidopsis thaliana roots ... 174 2e-042
ref|NM_179160.1| Arabidopsis thaliana O-methyltransferase A... 173 5e-042
gb|CK119117.1|CK119117 214h16.p1 AtM1 Arabidopsis thaliana ... 157 2e-037
emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome... 137 7e-037
emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosom... 137 1e-036
gb|AV551403.1|AV551403 AV551403 Arabidopsis thaliana roots ... 150 4e-035
gb|AV564395.1|AV564395 AV564395 Arabidopsis thaliana green ... 150 4e-035
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 137 9e-035
gb|AV557479.1|AV557479 AV557479 Arabidopsis thaliana green ... 148 1e-034
gb|AV542254.1|AV542254 AV542254 Arabidopsis thaliana roots ... 147 2e-034
gb|AV543497.1|AV543497 AV543497 Arabidopsis thaliana roots ... 144 3e-033
gb|CK121692.1|CK121692 202c15.p1 AtM1 Arabidopsis thaliana ... 144 3e-033
gb|BP612130.1|BP612130 BP612130 RAFL16 Arabidopsis thaliana... 143 4e-033
gb|BU635690.1|BU635690 004G05 Infected Arabidopsis Leaf Ara... 124 2e-031
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 137 3e-031
gb|AV539351.1|AV539351 AV539351 Arabidopsis thaliana roots ... 84 2e-029
gb|AI995849.1|AI995849 701548909 A. thaliana, Columbia Col-... 81 2e-029
gb|AV565601.1|AV565601 AV565601 Arabidopsis thaliana green ... 131 2e-029
gb|AV538191.1|AV538191 AV538191 Arabidopsis thaliana roots ... 127 3e-028
gb|AV567247.1|AV567247 AV567247 Arabidopsis thaliana green ... 127 4e-028
gb|T43879.1|T43879 7142 Lambda-PRL2 Arabidopsis thaliana cD... 125 1e-027
gb|AV535845.1|AV535845 AV535845 Arabidopsis thaliana flower... 125 1e-027
gb|AV560983.1|AV560983 AV560983 Arabidopsis thaliana green ... 125 1e-027
gb|AV557578.1|AV557578 AV557578 Arabidopsis thaliana green ... 124 2e-027
gb|AF360317.1| Arabidopsis thaliana putative caffeoyl-CoA O... 124 2e-027
gb|AY056313.1| Arabidopsis thaliana putative caffeoyl-CoA O... 124 2e-027
emb|AX507705.1| Sequence 2400 from Patent WO0216655 124 2e-027
ref|NM_118755.2| Arabidopsis thaliana O-methyltransferase/ ... 124 2e-027
gb|BP636344.1|BP636344 BP636344 RAFL18 Arabidopsis thaliana... 124 3e-027
gb|BP572962.1|BP572962 BP572962 RAFL14 Arabidopsis thaliana... 91 2e-026
gb|AA042641.1|AA042641 24873 CD4-13 Arabidopsis thaliana cD... 120 5e-026
gb|BP572094.1|BP572094 BP572094 RAFL14 Arabidopsis thaliana... 119 6e-026
gb|AY087244.1| Arabidopsis thaliana clone 33227 mRNA, compl... 118 2e-025
gb|BP620109.1|BP620109 BP620109 RAFL16 Arabidopsis thaliana... 117 2e-025
gb|AV556958.1|AV556958 AV556958 Arabidopsis thaliana green ... 116 4e-025
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 83 6e-025
gb|AC004133.3|AC004133 Genomic sequence for Arabidopsis tha... 83 6e-025
ref|NM_102310.1| Arabidopsis thaliana O-methyltransferase/ ... 83 6e-025
gb|BP567142.1|BP567142 BP567142 RAFL14 Arabidopsis thaliana... 88 1e-024
gb|BP571788.1|BP571788 BP571788 RAFL14 Arabidopsis thaliana... 113 5e-024
gb|CF773842.1|CF773842 AG_FSL_23D09 Arabidopsis ag-1 35S:AG... 82 9e-024
gb|BP584188.1|BP584188 BP584188 RAFL14 Arabidopsis thaliana... 111 2e-023
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 77 2e-023
gb|AC012563.7|AC012563 Arabidopsis thaliana chromosome 1 BA... 77 3e-023
emb|AJ242988.1|ATH242988 Arabidopsis thaliana DNA for regul... 77 3e-023
ref|NM_105468.1| Arabidopsis thaliana CCoAMT; caffeoyl-CoA ... 77 3e-023
ref|NM_202375.1| Arabidopsis thaliana CCoAMT AT1G67980 (CCo... 77 3e-023
emb|BX817367.1|CNS0AAMA Arabidopsis thaliana Full-length cD... 77 3e-023
emb|AX412281.1| Sequence 45 from Patent WO0222675 77 3e-023
emb|AX412282.1| Sequence 46 from Patent WO0222675 77 3e-023
emb|AX507044.1| Sequence 1739 from Patent WO0216655 77 3e-023
emb|AX651360.1| Sequence 151 from Patent WO03000898 77 3e-023
gb|BP573014.1|BP573014 BP573014 RAFL14 Arabidopsis thaliana... 81 4e-023
emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosom... 95 1e-022
emb|AL049171.1|ATT25K17 Arabidopsis thaliana DNA chromosome... 95 1e-022
emb|AX461218.1| Sequence 147 from Patent WO0198480 95 1e-022
gb|AV804325.1|AV804325 AV804325 RAFL9 Arabidopsis thaliana ... 108 1e-022
gb|AV819973.1|AV819973 AV819973 RAFL11 Arabidopsis thaliana... 108 1e-022
gb|BP630559.1|BP630559 BP630559 RAFL17 Arabidopsis thaliana... 108 1e-022
gb|BP565886.1|BP565886 BP565886 RAFL14 Arabidopsis thaliana... 105 1e-021
gb|BP785848.1|BP785848 BP785848 RAFL7 Arabidopsis thaliana ... 105 1e-021
gb|BP790412.1|BP790412 BP790412 RAFL7 Arabidopsis thaliana ... 105 1e-021
gb|BP669176.1|BP669176 BP669176 RAFL21 Arabidopsis thaliana... 104 2e-021
gb|BP585107.1|BP585107 BP585107 RAFL15 Arabidopsis thaliana... 60 5e-021
gb|AV789655.1|AV789655 AV789655 RAFL6 Arabidopsis thaliana ... 102 8e-021
gb|BP782790.1|BP782790 BP782790 RAFL7 Arabidopsis thaliana ... 102 8e-021
>gb|AV782400.1|AV782400 AV782400 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-17-C19 3',
mRNA sequence
Length = 681
Score = 182 bits (391), Expect = 1e-044
Identities = 72/133 (54%), Positives = 95/133 (71%)
Frame = -2 / -3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 523 EKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGG 344
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICR
Sbjct: 343 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICR 164
Query: 238 RLV*WSQCVPRAC 200
R+ *+ + C
Sbjct: 163 RIS*FDSSLL*VC 125
>gb|CF652643.1|CF652643 68-L020135w-066-001-G17-SP6P MPIZ-ADIS-066 Arabidopsis thaliana
cDNA clone MPIZp2001G171Q 5-PRIME, mRNA sequence
Length = 924
Score = 182 bits (391), Expect = 1e-044
Identities = 72/133 (54%), Positives = 95/133 (71%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 464 EKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGG 643
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICR
Sbjct: 644 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICR 823
Query: 238 RLV*WSQCVPRAC 200
R+ *+ + C
Sbjct: 824 RIS*FDSSLL*VC 862
>gb|AY057554.1| Arabidopsis thaliana AT4g34050/F28A23_190 mRNA, complete cds
Length = 1026
Score = 182 bits (391), Expect = 1e-044
Identities = 72/133 (54%), Positives = 95/133 (71%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 474 EKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGG 653
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICR
Sbjct: 654 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICR 833
Query: 238 RLV*WSQCVPRAC 200
R+ *+ + C
Sbjct: 834 RIS*FDSSLL*VC 872
>gb|AY062630.1| Arabidopsis thaliana Phosphoglycerate dehydrogenase - like protein
(At4g34050) mRNA, complete cds
Length = 999
Score = 182 bits (391), Expect = 1e-044
Identities = 72/133 (54%), Positives = 95/133 (71%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 476 EKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGG 655
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICR
Sbjct: 656 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICR 835
Query: 238 RLV*WSQCVPRAC 200
R+ *+ + C
Sbjct: 836 RIS*FDSSLL*VC 874
>gb|AY081457.1| Arabidopsis thaliana phosphoglycerate dehydrogenase-like protein
(At4g34050) mRNA, complete cds
Length = 815
Score = 182 bits (391), Expect = 1e-044
Identities = 72/133 (54%), Positives = 95/133 (71%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 409 EKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGG 588
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICR
Sbjct: 589 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICR 768
Query: 238 RLV*WSQCVPRAC 200
R+ *+ + C
Sbjct: 769 RIS*FDSSLL*VC 807
>emb|BX826590.1|CNS0A35S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB44ZH02 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1024
Score = 182 bits (391), Expect = 1e-044
Identities = 72/133 (54%), Positives = 95/133 (71%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 452 EKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGG 631
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICR
Sbjct: 632 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICR 811
Query: 238 RLV*WSQCVPRAC 200
R+ *+ + C
Sbjct: 812 RIS*FDSSLL*VC 850
>emb|BX828287.1|CNS0A315 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH71ZC07 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1003
Score = 182 bits (391), Expect = 1e-044
Identities = 72/133 (54%), Positives = 95/133 (71%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 452 EKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGG 631
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICR
Sbjct: 632 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICR 811
Query: 238 RLV*WSQCVPRAC 200
R+ *+ + C
Sbjct: 812 RIS*FDSSLL*VC 850
>ref|NM_119566.3| Arabidopsis thaliana O-methyltransferase/
S-adenosylmethionine-dependent methyltransferase
AT4G34050 transcript variant AT4G34050.1 mRNA, complete
cds
Length = 1091
Score = 182 bits (391), Expect = 1e-044
Identities = 72/133 (54%), Positives = 95/133 (71%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 477 EKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGG 656
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICR
Sbjct: 657 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICR 836
Query: 238 RLV*WSQCVPRAC 200
R+ *+ + C
Sbjct: 837 RIS*FDSSLL*VC 875
>gb|AY143979.1| Arabidopsis thaliana At4g34050/F28A23_190 mRNA, complete cds
Length = 780
Score = 181 bits (389), Expect = 2e-044
Identities = 70/122 (57%), Positives = 91/122 (74%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 409 EKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGG 588
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICR
Sbjct: 589 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICR 768
Query: 238 RL 233
R+
Sbjct: 769 RI 774
>emb|CQ804646.1| Sequence 1057 from Patent WO2004035798
Length = 780
Score = 181 bits (389), Expect = 2e-044
Identities = 70/122 (57%), Positives = 91/122 (74%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 409 EKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGG 588
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICR
Sbjct: 589 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICR 768
Query: 238 RL 233
R+
Sbjct: 769 RI 774
>emb|CQ805684.1| Sequence 2095 from Patent WO2004035798
Length = 780
Score = 181 bits (389), Expect = 2e-044
Identities = 70/122 (57%), Positives = 91/122 (74%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 409 EKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGG 588
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICR
Sbjct: 589 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICR 768
Query: 238 RL 233
R+
Sbjct: 769 RI 774
>gb|BE844710.1|BE844710 AD01C10T7 AD A. thaliana (Col-0 gl1) library enriched for
salt-induced transcripts; 10-14 day seedlings; 4h 160mM
NaCl stress Arabidopsis thaliana cDNA clone AD01C10
similar to T05431 probable caffeoyl-CoA
O-methyltransferase (EC 2.1.1.104) F28A23.190, mRNA
sequence
Length = 587
Score = 180 bits (387), Expect = 4e-044
Identities = 71/133 (53%), Positives = 95/133 (71%)
Frame = -2 / -1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
++AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 539 KKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGG 360
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICR
Sbjct: 359 VIGYDNTLWNGSVVAPPDAPMRKYFRYYRDFVLELNKALAADPRIEICMLPVGDGITICR 180
Query: 238 RLV*WSQCVPRAC 200
R+ *+ + C
Sbjct: 179 RIS*FDSSLL*VC 141
>gb|AV538609.1|AV538609 AV538609 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ119b12F 3', mRNA sequence
Length = 613
Score = 179 bits (386), Expect = 5e-044
Identities = 71/132 (53%), Positives = 94/132 (71%)
Frame = -2 / -3
Query: 595 RAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGT 416
+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 611 KAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGGV 432
Query: 415 IVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRR 236
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICRR
Sbjct: 431 IGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICRR 252
Query: 235 LV*WSQCVPRAC 200
+ *+ + C
Sbjct: 251 IS*FDSSLL*VC 216
>gb|AY088577.1| Arabidopsis thaliana clone 8049 mRNA, complete sequence
Length = 1033
Score = 178 bits (384), Expect = 1e-043
Identities = 71/133 (53%), Positives = 94/133 (70%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK Y NYH++L+ LV++GG
Sbjct: 478 EKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDXYINYHKRLIDLVKIGG 657
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICR
Sbjct: 658 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICR 837
Query: 238 RLV*WSQCVPRAC 200
R+ *+ + C
Sbjct: 838 RIS*FDSSLL*VC 876
>gb|AV538779.1|AV538779 AV538779 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ121b07F 3', mRNA sequence
Length = 595
Score = 175 bits (377), Expect = 1e-042
Identities = 70/133 (52%), Positives = 93/133 (69%)
Frame = -2 / -1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK Y YH++L+ LV++GG
Sbjct: 553 EKAGVAHKMDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDKYIKYHKRLIDLVKIGG 374
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICR 239
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICR
Sbjct: 373 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICR 194
Query: 238 RLV*WSQCVPRAC 200
R+ *+ + C
Sbjct: 193 RIS*FDSSLL*VC 155
>gb|AV543668.1|AV543668 AV543668 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ204e12F 3', mRNA sequence
Length = 603
Score = 174 bits (374), Expect = 2e-042
Identities = 69/129 (53%), Positives = 91/129 (70%)
Frame = -2 / -2
Query: 586 VAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVY 407
VA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG I Y
Sbjct: 602 VAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGGVIGY 423
Query: 406 DNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV* 227
DNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICRR+ *
Sbjct: 422 DNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICRRIS* 243
Query: 226 WSQCVPRAC 200
+ + C
Sbjct: 242 FDSSLL*VC 216
>ref|NM_179160.1| Arabidopsis thaliana O-methyltransferase AT4G34050 transcript
variant AT4G34050.2 mRNA, complete cds
Length = 476
Score = 173 bits (372), Expect = 5e-042
Identities = 67/118 (56%), Positives = 87/118 (73%)
Frame = -2 / +3
Query: 586 VAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVY 407
VA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG I Y
Sbjct: 117 VAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGGVIGY 296
Query: 406 DNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRL 233
DNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICRR+
Sbjct: 297 DNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICRRI 470
>gb|CK119117.1|CK119117 214h16.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H16214
5-PRIME, mRNA sequence
Length = 789
Score = 157 bits (338), Expect = 2e-037
Identities = 62/108 (57%), Positives = 80/108 (74%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 462 EKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGG 641
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVC 275
I YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C
Sbjct: 642 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEIC 785
>emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A23 (ESSA project)
Length = 94091
Score = 137 bits (294), Expect(2) = 7e-037
Identities = 53/107 (49%), Positives = 72/107 (67%)
Frame = -2 / +3
Query: 520 EANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDR 341
E N G +DF FVDADK NY NYH++L+ LV++GG I YDNTLW G+V PP+ PM R
Sbjct: 15189 EKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMRKYVR 15368
Query: 340 RFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
+ + +LN L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 15369 YYRDFVLELNKALAADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 15509
Score = 47.3 bits (97), Expect(2) = 7e-037
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLAD 521
E+AGVA K+DFREGPAL LDE++AD
Sbjct: 14929 EKAGVAHKIDFREGPALPVLDEIVAD 15006
>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80
Length = 192861
Score = 137 bits (294), Expect(2) = 1e-036
Identities = 53/107 (49%), Positives = 72/107 (67%)
Frame = -2 / +2
Query: 520 EANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDR 341
E N G +DF FVDADK NY NYH++L+ LV++GG I YDNTLW G+V PP+ PM R
Sbjct: 145238 EKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMRKYVR 145417
Query: 340 RFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
+ + +LN L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 145418 YYRDFVLELNKALAADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 145558
Score = 47.3 bits (97), Expect(2) = 1e-036
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLAD 521
E+AGVA K+DFREGPAL LDE++AD
Sbjct: 144978 EKAGVAHKIDFREGPALPVLDEIVAD 145055
>gb|AV551403.1|AV551403 AV551403 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ126c06R 5', mRNA sequence
Length = 562
Score = 150 bits (322), Expect = 4e-035
Identities = 58/114 (50%), Positives = 79/114 (69%)
Frame = -2 / -2
Query: 541 LDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPET 362
LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG I YDNTLW G+V PP+
Sbjct: 555 LDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDA 376
Query: 361 PMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
PM R + + +LN L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 375 PMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 214
>gb|AV564395.1|AV564395 AV564395 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ203h01F 3', mRNA sequence
Length = 557
Score = 150 bits (322), Expect = 4e-035
Identities = 58/114 (50%), Positives = 79/114 (69%)
Frame = -2 / -1
Query: 541 LDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPET 362
LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG I YDNTLW G+V PP+
Sbjct: 557 LDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDA 378
Query: 361 PMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
PM R + + +LN L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 377 PMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 216
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 137 bits (294), Expect(2) = 9e-035
Identities = 53/107 (49%), Positives = 72/107 (67%)
Frame = -2 / +1
Query: 520 EANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDR 341
E N G +DF FVDADK NY NYH++L+ LV++GG I YDNTLW G+V PP+ PM R
Sbjct: 12224467 EKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMRKYVR 12224646
Query: 340 RFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
+ + +LN L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 12224647 YYRDFVLELNKALAADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 12224787
Score = 94.5 bits (200), Expect(2) = 1e-022
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = -2 / +2
Query: 520 EANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMP 371
+ N G FDFAFVDADK NY+NYHE+L+RL++VGG IVYDNTLW G+VA P
Sbjct: 9197633 KVNEGGFDFAFVDADKLNYWNYHERLIRLIKVGGIIVYDNTLWGGSVAEP 9197782
Score = 47.3 bits (97), Expect(2) = 9e-035
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLAD 521
E+AGVA K+DFREGPAL LDE++AD
Sbjct: 12224207 EKAGVAHKIDFREGPALPVLDEIVAD 12224284
Score = 33.6 bits (67), Expect(2) = 1e-022
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELL 527
++AGV K+DF+E AL LDELL
Sbjct: 9197469 KKAGVEHKIDFKESEALPALDELL 9197540
>gb|AV557479.1|AV557479 AV557479 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ069g05F 3', mRNA sequence
Length = 496
Score = 148 bits (318), Expect = 1e-034
Identities = 57/113 (50%), Positives = 78/113 (69%)
Frame = -2 / -2
Query: 538 DELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETP 359
DE++ADE N G +DF FVDADK NY NYH++L+ LV++GG I YDNTLW G+V PP+ P
Sbjct: 495 DEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAP 316
Query: 358 MSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
M R + + +LN L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 315 MRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 157
>gb|AV542254.1|AV542254 AV542254 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ181b05F 3', mRNA sequence
Length = 576
Score = 147 bits (316), Expect = 2e-034
Identities = 60/120 (50%), Positives = 80/120 (66%)
Frame = -2 / -2
Query: 559 GPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTV 380
GPAL LD ++ADE G +DF FVDADK NY NYH++L+ LV++GG I YDNTLW G+V
Sbjct: 575 GPALPVLD*IVADEKIHGTYDFIFVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSV 396
Query: 379 AMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
PP PM R + + +LN L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 395 VAPPYAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 216
>gb|AV543497.1|AV543497 AV543497 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ201g06F 3', mRNA sequence
Length = 497
Score = 144 bits (308), Expect = 3e-033
Identities = 56/118 (47%), Positives = 79/118 (66%)
Frame = -2 / -1
Query: 553 ALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAM 374
AL LD+++ADE G +DF FVDADK NY N+H++L+ LV++GG I YDNTLW G+V
Sbjct: 497 ALPVLDKIVADEKTHGTYDFIFVDADKDNYINFHKRLIDLVKIGGVIGYDNTLWNGSVVA 318
Query: 373 PPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
PP+ PM R + + +LN L+ D R+E+C L + DG+TICRR+ *+ + C
Sbjct: 317 PPDAPMRKYVRYYKDFVLELNKALAVDPRIEICMLPVGDGITICRRIS*FDSSLL*VC 144
>gb|CK121692.1|CK121692 202c15.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011C15202
5-PRIME, mRNA sequence
Length = 763
Score = 144 bits (308), Expect = 3e-033
Identities = 58/101 (57%), Positives = 74/101 (73%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL LDE++ADE N G +DF FVDADK NY NYH++L+ LV++GG
Sbjct: 459 EKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGG 638
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSA 296
I YDNTLW G+V PP+ PM R + + +LN L+A
Sbjct: 639 VIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAA 761
>gb|BP612130.1|BP612130 BP612130 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-88-F23 3',
mRNA sequence
Length = 443
Score = 143 bits (307), Expect = 4e-033
Identities = 55/111 (49%), Positives = 76/111 (68%)
Frame = -2 / -3
Query: 532 LLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMS 353
++ADE N G +DF FVDADK NY NYH++L+ LV++GG I YDNTLW G+V PP+ PM
Sbjct: 441 IVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMR 262
Query: 352 DIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
R + + +LN L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 261 KYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 109
>gb|BU635690.1|BU635690 004G05 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 748
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 47/91 (51%), Positives = 63/91 (69%)
Frame = -2 / +2
Query: 514 NLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRF 335
N G +DF FVDAD NY NYH++L+ LV++GG I YDNTLW G+V PP+ PM R +
Sbjct: 476 NHGTYDFIFVDAD*DNYINYHKRLIDLVKIGGVIGYDNTLWNGSVEAPPDAPMRKYVRYY 655
Query: 334 SAAIRDLNVRLSADERVEVCQLAIADGVTIC 242
+ +LN L+AD R+E+C L + DG+TIC
Sbjct: 656 RDFVLELNKALAADPRIEICMLPVGDGITIC 748
Score = 33.1 bits (66), Expect(2) = 2e-031
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -2 / +3
Query: 598 ERAGVAGKVDFREGP 554
E+AGVA K+DFREGP
Sbjct: 390 EKAGVAHKIDFREGP 434
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 137 bits (294), Expect = 3e-031
Identities = 53/107 (49%), Positives = 72/107 (67%)
Frame = -2 / +1
Query: 520 EANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDR 341
E N G +DF FVDADK NY NYH++L+ LV++GG I YDNTLW G+V PP+ PM R
Sbjct: 16311685 EKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMRKYVR 16311864
Query: 340 RFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
+ + +LN L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 16311865 YYRDFVLELNKALAADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 16312005
>gb|AV539351.1|AV539351 AV539351 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ130e08F 3', mRNA sequence
Length = 552
Score = 84.5 bits (178), Expect(2) = 2e-029
Identities = 33/77 (42%), Positives = 47/77 (61%)
Frame = -2 / -1
Query: 430 RVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGV 251
+ GG I YDNT W G+V PP+ PM R + + +LN L+AD R+E+C L + DG+
Sbjct: 423 KCGGVIGYDNTPWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGI 244
Query: 250 TICRRLV*WSQCVPRAC 200
TICRR+ *+ + C
Sbjct: 243 TICRRIS*FDSSLL*VC 193
Score = 67.0 bits (140), Expect(2) = 2e-029
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = -2 / -3
Query: 556 PALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRV 425
PAL LDE++ADE N G +DF FVDADK NY YH++L+ LV++
Sbjct: 550 PALPVLDEIVADEKNHGTYDFIFVDADKDNYIKYHKRLIDLVKM 419
>gb|AI995849.1|AI995849 701548909 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701548909, mRNA sequence
Length = 472
Score = 81.3 bits (171), Expect(2) = 2e-029
Identities = 31/70 (44%), Positives = 44/70 (62%)
Frame = -2 / -3
Query: 409 YDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRLSADERVEVCQLAIADGVTICRRLV 230
YDNTLW G+V PP+ PM R + + +LN L+AD R+E+C L + DG+TICRR+
Sbjct: 329 YDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICRRIS 150
Query: 229 *WSQCVPRAC 200
*+ + C
Sbjct: 149 *FDSSLL*VC 120
Score = 70.3 bits (147), Expect(2) = 2e-029
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = -2 / -1
Query: 541 LDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTI 413
LDE++ADE N G +D FVDADK NY NYH++L+ LV++GG I
Sbjct: 460 LDEIVADEKNHGTYDXIFVDADKDNYINYHKRLIDLVKIGGVI 332
>gb|AV565601.1|AV565601 AV565601 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ227c08F 3', mRNA sequence
Length = 509
Score = 131 bits (281), Expect = 2e-029
Identities = 50/101 (49%), Positives = 69/101 (68%)
Frame = -2 / -2
Query: 502 FDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAI 323
+DF FVDADK NY NYH++L+ LV++GG I YDNTLW G+V PP+ PM R + +
Sbjct: 505 YDFIFVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFV 326
Query: 322 RDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
+LN L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 325 LELNKALAADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 203
>gb|AV538191.1|AV538191 AV538191 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ111d01F 3', mRNA sequence
Length = 449
Score = 127 bits (272), Expect = 3e-028
Identities = 49/99 (49%), Positives = 67/99 (67%)
Frame = -2 / -1
Query: 496 FAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRD 317
F FVDADK NY NYH++L+ LV++GG I YDNTLW G+V PP+ PM R + + +
Sbjct: 449 FIFVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLE 270
Query: 316 LNVRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
LN L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 269 LNKALAADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 153
>gb|AV567247.1|AV567247 AV567247 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQL09f05F 3', mRNA sequence
Length = 390
Score = 127 bits (271), Expect = 4e-028
Identities = 48/97 (49%), Positives = 66/97 (68%)
Frame = -2 / -2
Query: 490 FVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLN 311
FVDADKP Y NYH++L+ LV++GG I YDNTLW G+V PP+ PM R + + +LN
Sbjct: 386 FVDADKPIYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDLVIELN 207
Query: 310 VRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 206 KALAADPRIEICMLPVGDGITICRRIS*FDSSILSVC 96
>gb|T43879.1|T43879 7142 Lambda-PRL2 Arabidopsis thaliana cDNA clone 118N13T7, mRNA
sequence
Length = 390
Score = 125 bits (267), Expect = 1e-027
Identities = 51/96 (53%), Positives = 64/96 (66%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
E+AGVA K+DFREGPAL L E++ADE N G + F FV ADK NY NYH+ L L ++GG
Sbjct: 8 EKAGVAHKIDFREGPALPVLXEIVADEKNHGTYXFIFVXADKDNYINYHKXLXDLXKIGG 187
Query: 418 TIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLN 311
I YDNTLW G+ PP+ PM R + + +LN
Sbjct: 188 VIGYDNTLWNGSXVAPPDAPMRKYVRXYRDFVLELN 295
>gb|AV535845.1|AV535845 AV535845 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB103c08F 3', mRNA sequence
Length = 448
Score = 125 bits (267), Expect = 1e-027
Identities = 48/97 (49%), Positives = 66/97 (68%)
Frame = -2 / -2
Query: 490 FVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLN 311
FVDADK NY NYH++L+ LV++GG I YDNTLW G+V PP+ PM R + + +LN
Sbjct: 444 FVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELN 265
Query: 310 VRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 264 KALAADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 154
>gb|AV560983.1|AV560983 AV560983 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ143h09F 3', mRNA sequence
Length = 411
Score = 125 bits (267), Expect = 1e-027
Identities = 48/97 (49%), Positives = 66/97 (68%)
Frame = -2 / -1
Query: 490 FVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLN 311
FVDADK NY NYH++L+ LV++GG I YDNTLW G+V PP+ PM R + + +LN
Sbjct: 408 FVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELN 229
Query: 310 VRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 228 KALAADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 118
>gb|AV557578.1|AV557578 AV557578 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ072d12F 3', mRNA sequence
Length = 568
Score = 124 bits (266), Expect = 2e-027
Identities = 50/76 (65%), Positives = 62/76 (81%)
Frame = -2 / -1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
++AGV K+DF+E AL LDELL ++ N G FDFAFVDADK NY+NYHE+L+RL++VGG
Sbjct: 502 KKAGVEHKIDFKESEALPALDELLNNKVNEGGFDFAFVDADKLNYWNYHERLIRLIKVGG 323
Query: 418 TIVYDNTLWCGTVAMP 371
IVYDNTLW G+VA P
Sbjct: 322 IIVYDNTLWGGSVAEP 275
>gb|AF360317.1| Arabidopsis thaliana putative caffeoyl-CoA O-methyltransferase
(At4g26220) mRNA, complete cds
Length = 956
Score = 124 bits (266), Expect = 2e-027
Identities = 50/76 (65%), Positives = 62/76 (81%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
++AGV K+DF+E AL LDELL ++ N G FDFAFVDADK NY+NYHE+L+RL++VGG
Sbjct: 421 KKAGVEHKIDFKESEALPALDELLNNKVNEGGFDFAFVDADKLNYWNYHERLIRLIKVGG 600
Query: 418 TIVYDNTLWCGTVAMP 371
IVYDNTLW G+VA P
Sbjct: 601 IIVYDNTLWGGSVAEP 648
>gb|AY056313.1| Arabidopsis thaliana putative caffeoyl-CoA O-methyltransferase
(At4g26220) mRNA, complete cds
Length = 730
Score = 124 bits (266), Expect = 2e-027
Identities = 50/76 (65%), Positives = 62/76 (81%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
++AGV K+DF+E AL LDELL ++ N G FDFAFVDADK NY+NYHE+L+RL++VGG
Sbjct: 331 KKAGVEHKIDFKESEALPALDELLNNKVNEGGFDFAFVDADKLNYWNYHERLIRLIKVGG 510
Query: 418 TIVYDNTLWCGTVAMP 371
IVYDNTLW G+VA P
Sbjct: 511 IIVYDNTLWGGSVAEP 558
>emb|AX507705.1| Sequence 2400 from Patent WO0216655
Length = 729
Score = 124 bits (266), Expect = 2e-027
Identities = 50/76 (65%), Positives = 62/76 (81%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
++AGV K+DF+E AL LDELL ++ N G FDFAFVDADK NY+NYHE+L+RL++VGG
Sbjct: 361 KKAGVEHKIDFKESEALPALDELLNNKVNEGGFDFAFVDADKLNYWNYHERLIRLIKVGG 540
Query: 418 TIVYDNTLWCGTVAMP 371
IVYDNTLW G+VA P
Sbjct: 541 IIVYDNTLWGGSVAEP 588
>ref|NM_118755.2| Arabidopsis thaliana O-methyltransferase/
S-adenosylmethionine-dependent methyltransferase
AT4G26220 mRNA, complete cds
Length = 966
Score = 124 bits (266), Expect = 2e-027
Identities = 50/76 (65%), Positives = 62/76 (81%)
Frame = -2 / +1
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
++AGV K+DF+E AL LDELL ++ N G FDFAFVDADK NY+NYHE+L+RL++VGG
Sbjct: 421 KKAGVEHKIDFKESEALPALDELLNNKVNEGGFDFAFVDADKLNYWNYHERLIRLIKVGG 600
Query: 418 TIVYDNTLWCGTVAMP 371
IVYDNTLW G+VA P
Sbjct: 601 IIVYDNTLWGGSVAEP 648
>gb|BP636344.1|BP636344 BP636344 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-04-D13 3',
mRNA sequence
Length = 449
Score = 124 bits (265), Expect = 3e-027
Identities = 46/86 (53%), Positives = 62/86 (72%)
Frame = -2 / -2
Query: 490 FVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLN 311
FVDADK NY NYH++L+ LV++GG I YDNTLW G+V PP+ PM R + + +LN
Sbjct: 445 FVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELN 266
Query: 310 VRLSADERVEVCQLAIADGVTICRRL 233
L+AD R+E+C L + DG+TICRR+
Sbjct: 265 KALAADPRIEICMLPVGDGITICRRI 188
>gb|BP572962.1|BP572962 BP572962 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-82-E11 3',
mRNA sequence
Length = 466
Score = 90.9 bits (192), Expect(2) = 2e-026
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = -2 / -1
Query: 508 GAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMP 371
G FDFAFVDADK NY+NYHE+L+RL++VGG IVYDNTLW G+VA P
Sbjct: 430 G*FDFAFVDADKLNYWNYHERLIRLIKVGGIIVYDNTLWGGSVAEP 293
Score = 50.1 bits (103), Expect(2) = 2e-026
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = -2 / -1
Query: 319 DLNVRLSADERVEVCQLAIADGVTICRRLV*WS 221
+LN +LSAD+RV++ Q A+ DG+TICRRL * S
Sbjct: 244 ELNKKLSADQRVQISQAALGDGITICRRLY*AS 146
>gb|AA042641.1|AA042641 24873 CD4-13 Arabidopsis thaliana cDNA clone E12B7T7, mRNA sequence
Length = 582
Score = 120 bits (256), Expect = 5e-026
Identities = 47/103 (45%), Positives = 65/103 (63%)
Frame = -2 / -2
Query: 508 GAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSA 329
G DADK NY NYH++L+ LV++GG I YDNTLW G+V PP+ PM R +
Sbjct: 425 GHMALXXXDADKGNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRD 246
Query: 328 AIRDLNVRLSADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
+ +LN L+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 245 FVLELNKALAADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 117
>gb|BP572094.1|BP572094 BP572094 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-78-L03 3',
mRNA sequence
Length = 441
Score = 119 bits (255), Expect = 6e-026
Identities = 44/84 (52%), Positives = 60/84 (71%)
Frame = -2 / -1
Query: 484 DADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVR 305
DADK NY NYH++L+ LV++GG I YDNTLW G+V PP+ PM R + + +LN
Sbjct: 441 DADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKA 262
Query: 304 LSADERVEVCQLAIADGVTICRRL 233
L+AD R+E+C L + DG+TICRR+
Sbjct: 261 LAADPRIEICMLPVGDGITICRRI 190
>gb|AY087244.1| Arabidopsis thaliana clone 33227 mRNA, complete sequence
Length = 917
Score = 118 bits (252), Expect = 2e-025
Identities = 48/76 (63%), Positives = 60/76 (78%)
Frame = -2 / +2
Query: 598 ERAGVAGKVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGG 419
++AGV K+DF+E AL LDELL ++ N G F AFVDADK NY+NYHE+L+RL++VGG
Sbjct: 416 KKAGVEHKIDFKESEALPALDELLNNKVNEGGFXXAFVDADKLNYWNYHERLIRLIKVGG 595
Query: 418 TIVYDNTLWCGTVAMP 371
IVYDNTLW G+VA P
Sbjct: 596 IIVYDNTLWGGSVAEP 643
>gb|BP620109.1|BP620109 BP620109 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-35-N22 3',
mRNA sequence
Length = 435
Score = 117 bits (251), Expect = 2e-025
Identities = 45/94 (47%), Positives = 63/94 (67%)
Frame = -2 / -3
Query: 481 ADKPNYFNYHEQLLRLVRVGGTIVYDNTLWCGTVAMPPETPMSDIDRRFSAAIRDLNVRL 302
ADK NY NYH++L+ LV++GG I YDNTLW G+V PP+ PM R + + +LN L
Sbjct: 433 ADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKAL 254
Query: 301 SADERVEVCQLAIADGVTICRRLV*WSQCVPRAC 200
+AD R+E+C L + DG+TICRR+ *+ + C
Sbjct: 253 AADPRIEICMLPVGDGITICRRIS*FDSSLL*VC 152
>gb|AV556958.1|AV556958 AV556958 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ057b11F 3', mRNA sequence
Length = 496
Score = 116 bits (249), Expect = 4e-025
Identities = 47/69 (68%), Positives = 57/69 (82%)
Frame = -2 / -1
Query: 577 KVDFREGPALGNLDELLADEANLGAFDFAFVDADKPNYFNYHEQLLRLVRVGGTIVYDNT 398
K+DF+E AL LDELL ++ N G FDFAFVDADK NY+NYHE+L+RL++VGG IVYDNT
Sbjct: 496 KIDFKECEALPALDELLNNKVNEGGFDFAFVDADKLNYWNYHERLIRLIKVGGIIVYDNT 317
Query: 397 LWCGTVAMP 371
LW G+VA P
Sbjct: 316 LWGGSVAEP 290
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 860,985,504
Number of Sequences: 1013581
Number of extensions: 9984076
Number of successful extensions: 163177
Number of sequences better than 1.0e-020: 92
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 35601600240
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)