TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750912.2.1
(1095 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_180913.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE ... 314 e-119
gb|BT000784.1| Arabidopsis thaliana clone RAFL07-10-G12 (R1... 314 e-119
ref|NM_203251.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE ... 314 e-119
emb|CS165494.1| Sequence 2 from Patent WO2005085453 314 e-119
ref|NM_125593.2| Arabidopsis thaliana ARF2 (AUXIN RESPONSE ... 314 e-119
dbj|AK221305.1| Arabidopsis thaliana mRNA for ARF1-binding ... 314 e-119
dbj|AK221252.1| Arabidopsis thaliana mRNA for ARF1-binding ... 314 e-119
dbj|AK221254.1| Arabidopsis thaliana mRNA for ARF1-binding ... 314 e-119
dbj|AK221274.1| Arabidopsis thaliana mRNA for ARF1-binding ... 314 e-119
dbj|AK221277.1| Arabidopsis thaliana mRNA for ARF1-binding ... 314 e-119
dbj|AK221282.1| Arabidopsis thaliana mRNA for ARF1-binding ... 314 e-119
gb|AF378862.1|AF378862 Arabidopsis thaliana AT5g62000/mtg10... 314 e-119
gb|AY669787.1| Arabidopsis thaliana clone C105342 ARF2 (At5... 314 e-119
emb|CS165547.1| Sequence 55 from Patent WO2005085453 314 e-119
emb|CS165497.1| Sequence 5 from Patent WO2005085453 314 e-119
emb|CS165548.1| Sequence 56 from Patent WO2005085453 314 e-119
gb|BT001072.1| Arabidopsis thaliana At5g62000/mtg10_20 mRNA... 314 e-119
emb|CS165493.1| Sequence 1 from Patent WO2005085453 102 4e-090
emb|CS165496.1| Sequence 4 from Patent WO2005085453 102 4e-090
dbj|AB016880.1| Arabidopsis thaliana genomic DNA, chromosom... 102 6e-082
ref|NM_130218.3| Arabidopsis thaliana ARF11 (AUXIN RESPONSE... 167 8e-079
ref|NM_201972.1| Arabidopsis thaliana ARF11 (AUXIN RESPONSE... 167 8e-079
ref|NM_116048.2| Arabidopsis thaliana ARF18; transcription ... 174 8e-079
gb|AY070463.1| Arabidopsis thaliana AT3g61830/F15G16_220 mR... 174 8e-079
gb|AY059746.1| Arabidopsis thaliana auxin response factor A... 174 8e-079
ref|NM_001036471.1| Arabidopsis thaliana ARF11 (AUXIN RESPO... 167 8e-079
emb|BX823552.1|CNS0A4QR Arabidopsis thaliana Full-length cD... 174 8e-079
gb|AY669791.1| Arabidopsis thaliana clone C105346 ARF11 (At... 167 8e-079
gb|AY091392.1| Arabidopsis thaliana putative auxin response... 174 8e-079
gb|AF334717.1| Arabidopsis thaliana auxin response factor A... 174 8e-079
ref|NM_104668.2| Arabidopsis thaliana ARF1 (AUXIN RESPONSE ... 246 2e-078
gb|AY133723.1| Arabidopsis thaliana auxin response factor 1... 246 2e-078
ref|NM_179499.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE ... 246 2e-078
gb|U83245.1|ATU83245 Arabidopsis thaliana auxin response fa... 246 2e-078
ref|NM_001036131.1| Arabidopsis thaliana ARF1 (AUXIN RESPON... 246 2e-078
gb|BT002748.1| Arabidopsis thaliana clone C105458 auxin res... 246 2e-078
emb|AX507306.1| Sequence 2001 from Patent WO0216655 246 2e-078
gb|BU635530.1|BU635530 024G07 Infected Arabidopsis Leaf Ara... 246 2e-078
ref|NM_001036629.1| Arabidopsis thaliana ARF9 (AUXIN RESPON... 176 3e-078
ref|NM_118530.3| Arabidopsis thaliana ARF9 (AUXIN RESPONSE ... 176 3e-078
emb|BX828437.1|CNS0A2BW Arabidopsis thaliana Full-length cD... 176 3e-078
gb|AF082176.1|AF082176 Arabidopsis thaliana auxin response ... 176 3e-078
gb|AF344312.1| Arabidopsis thaliana clone C00029 (e) auxin ... 176 3e-078
emb|BX815613.1|CNS0ADXB Arabidopsis thaliana Full-length cD... 136 1e-066
emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome... 84 2e-066
emb|AL132959.1|ATF15G16 Arabidopsis thaliana DNA chromosome... 84 2e-066
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 106 5e-064
emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosom... 85 5e-064
gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV... 85 5e-064
emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome... 85 6e-064
emb|BX820997.1|CNS0A8K9 Arabidopsis thaliana Full-length cD... 149 2e-061
gb|AY669795.1| Arabidopsis thaliana clone C00610 ARF20 (At1... 236 8e-061
ref|NM_103222.2| Arabidopsis thaliana ARF20; transcription ... 236 8e-061
gb|AC006526.8| Arabidopsis thaliana chromosome 2 clone F11C... 76 6e-060
gb|AC006418.4| Arabidopsis thaliana chromosome 2 clone F13A... 76 6e-060
gb|AY669796.1| Arabidopsis thaliana clone C105354 ARF22 (At... 136 2e-059
ref|NM_103162.2| Arabidopsis thaliana ARF22; transcription ... 136 2e-059
ref|NM_103248.1| Arabidopsis thaliana ARF15; transcription ... 133 4e-059
ref|NM_125438.2| Arabidopsis thaliana ARF4 (AUXIN RESPONSE ... 119 6e-059
gb|AY080832.1| Arabidopsis thaliana auxin response factor A... 119 7e-059
gb|AF013466.1|AF013466 Arabidopsis thaliana auxin response ... 119 7e-059
gb|AY113977.1| Arabidopsis thaliana auxin response factor A... 119 7e-059
gb|AF344313.1| Arabidopsis thaliana auxin response factor 4... 119 7e-059
gb|AY669792.1| Arabidopsis thaliana clone C105347 ARF12 (At... 138 4e-058
ref|NM_103153.2| Arabidopsis thaliana ARF12; transcription ... 138 4e-058
ref|NM_103250.1| Arabidopsis thaliana ARF14; transcription ... 134 5e-058
gb|AY669793.1| Arabidopsis thaliana clone C105348 (B) ARF13... 124 6e-058
ref|NM_103140.3| Arabidopsis thaliana ARF13; transcription ... 124 6e-058
gb|U53672.2|ATU53672 Arabidopsis thaliana early auxin-induc... 196 1e-057
ref|NM_101780.1| Arabidopsis thaliana ARF19; transcription ... 196 1e-057
gb|AY669794.1| Arabidopsis thaliana clone C105352 ARF19 (At... 196 1e-057
ref|NM_103164.2| Arabidopsis thaliana ARF21; transcription ... 129 3e-057
gb|BT015544.1| Arabidopsis thaliana At4g23980 mRNA sequence 139 1e-056
ref|NM_102771.2| Arabidopsis thaliana ARF6 (AUXIN RESPONSE ... 163 2e-056
gb|AF013467.1|AF013467 Arabidopsis thaliana ARF6 (ARF6) mRN... 163 2e-056
ref|NM_001036038.1| Arabidopsis thaliana ARF6 (AUXIN RESPON... 163 2e-056
gb|AY669788.1| Arabidopsis thaliana clone C105343 ARF6 (At1... 163 2e-056
ref|NM_180716.1| Arabidopsis thaliana NPH4 (NON-PHOTOTROPHI... 191 2e-056
gb|AF042195.1|AF042195 Arabidopsis thaliana auxin response ... 191 2e-056
gb|AY669789.1| Arabidopsis thaliana clone C105344 ARF7 (At5... 191 2e-056
gb|AY080595.1| Arabidopsis thaliana unknown protein (At5g20... 191 2e-056
emb|AX505548.1| Sequence 243 from Patent WO0216655 191 2e-056
ref|NM_101840.2| Arabidopsis thaliana MP (MONOPTEROS); tran... 151 4e-055
gb|BT002050.1| Arabidopsis thaliana transcription factor (A... 151 4e-055
gb|AF037229.1|AF037229 Arabidopsis thaliana transcription f... 151 4e-055
ref|NM_123060.2| Arabidopsis thaliana ARF8 (AUXIN RESPONSE ... 158 4e-055
gb|AF042196.1|AF042196 Arabidopsis thaliana auxin response ... 158 4e-055
emb|AX505602.1| Sequence 297 from Patent WO0216655 151 4e-055
emb|AX651413.1| Sequence 208 from Patent WO03000898 151 4e-055
gb|AF334716.1| Arabidopsis thaliana clone C00027 (h) auxin ... 151 4e-055
gb|BT008805.1| Arabidopsis thaliana At1g19850 gene, complet... 151 4e-055
gb|U79557.1|U79557 Arabidopsis thaliana IAA24 (IAA24) mRNA,... 151 4e-055
gb|AY669790.1| Arabidopsis thaliana clone C105345 ARF8 (At5... 158 4e-055
ref|NM_128946.2| Arabidopsis thaliana ETT (ETTIN); transcri... 118 4e-052
gb|U89296.1|ATU89296 Arabidopsis thaliana auxin response tr... 118 4e-052
gb|AF360313.1| Arabidopsis thaliana auxin response transcri... 118 4e-052
gb|AY056365.1| Arabidopsis thaliana auxin response transcri... 118 4e-052
gb|AF336917.1| Arabidopsis thaliana auxin response transcri... 118 4e-052
emb|AX506835.1| Sequence 1530 from Patent WO0216655 118 4e-052
emb|AX651787.1| Sequence 640 from Patent WO03000898 118 4e-052
gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11... 78 2e-048
gb|AY680406.1| Arabidopsis thaliana ARF13 (At1g34170) mRNA,... 94 2e-047
ref|NM_001036062.1| Arabidopsis thaliana ARF13 AT1G34170 (A... 94 2e-047
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 116 8e-047
gb|AC025813.3|AC025813 Arabidopsis thaliana chromosome I cl... 116 9e-047
gb|AC069143.3|T29M8 Sequence of BAC T29M8 from Arabidopsis ... 116 9e-047
gb|AY008390.1| Arabidopsis thaliana ARF11/IAA22 gene, compl... 116 9e-047
gb|AV528283.1|AV528283 AV528283 Arabidopsis thaliana aboveg... 163 1e-046
gb|AC015446.4|AC015446 Arabidopsis thaliana chromosome I BA... 62 4e-045
gb|AC023279.2|AC023279 Genomic sequence for Arabidopsis tha... 58 5e-043
gb|AC023913.7|AC023913 Arabidopsis thaliana chromosome 1 BA... 60 5e-043
dbj|AB011483.1| Arabidopsis thaliana genomic DNA, chromosom... 61 1e-042
gb|AC007887.9|AC007887 Genomic sequence for Arabidopsis tha... 60 6e-040
gb|AC007454.3|F23M19 Arabidopsis thaliana chromosome 1 BAC ... 62 3e-039
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 78 5e-039
gb|DR750436.1|DR750436 56-L022342-065-009-H07-SeLA MPIZ-ADI... 163 7e-039
gb|AC007797.7|AC007797 Arabidopsis thaliana chromosome I BA... 60 5e-038
gb|AF037228.1|AF037228 Arabidopsis thaliana transcription f... 60 6e-038
gb|AC069160.7|AC069160 Arabidopsis thaliana chromosome 1 BA... 59 8e-038
gb|AF186466.1|AF186466 Arabidopsis thaliana non-phototropic... 65 3e-037
gb|AY008392.1| Arabidopsis thaliana ARF7 (ARF7) gene, compl... 65 3e-037
ref|NM_122080.2| Arabidopsis thaliana NPH4 (NON-PHOTOTROPHI... 131 8e-037
ref|NM_180715.1| Arabidopsis thaliana NPH4 (NON-PHOTOTROPHI... 131 8e-037
gb|AF296832.1|T1M15 Arabidopsis thaliana BAC T1M15 65 2e-036
gb|BP561257.2|BP561257 BP561257 RAFL6 Arabidopsis thaliana ... 155 2e-036
gb|AF022368.1|AF022368 Arabidopsis thaliana BIPOSTO (BIP) m... 130 3e-036
gb|AF325073.1|AF325073 Arabidopsis thaliana unknown protein... 107 5e-036
gb|AF336919.1| Arabidopsis thaliana clone C00034 (b) auxin ... 107 5e-036
ref|NM_128394.3| Arabidopsis thaliana ARF10; transcription ... 107 6e-036
gb|AY091198.1| Arabidopsis thaliana putative transcription ... 106 3e-035
emb|BX828241.1|CNS0A2GB Arabidopsis thaliana Full-length cD... 106 4e-035
gb|AY059792.1| Arabidopsis thaliana putative transcription ... 106 4e-035
ref|NM_119154.3| Arabidopsis thaliana ARF16; transcription ... 106 4e-035
gb|BX839096.1|BX839096 BX839096 Arabidopsis thaliana Adult ... 118 9e-035
gb|AF099735.1|AF099735 Arabidopsis thaliana auxin response ... 107 6e-030
gb|AF007788.1|AF007788 Arabidopsis thaliana ETTIN gene, com... 60 8e-030
gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3... 107 2e-028
emb|AL078464.1|ATF6G3 Arabidopsis thaliana DNA chromosome 4... 106 2e-026
dbj|AB024026.1| Arabidopsis thaliana genomic DNA, chromosom... 64 7e-026
emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosom... 106 7e-026
gb|BT002749.1| Arabidopsis thaliana clone C104833 auxin res... 94 6e-025
ref|NM_106434.1| Arabidopsis thaliana ARF17; transcription ... 94 7e-025
gb|AY056184.1| Arabidopsis thaliana auxin response factor A... 94 7e-025
emb|BX814425.1|CNS0AEKM Arabidopsis thaliana Full-length cD... 94 9e-025
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 116 1e-024
gb|BX838143.1|BX838143 BX838143 Arabidopsis thaliana Hormon... 115 3e-024
gb|AQ955228.1|AQ955228 LERAB10TR LERA Arabidopsis thaliana ... 69 4e-024
gb|U78721.3| Arabidopsis thaliana chromosome 2 clone T1B8 m... 60 2e-023
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 107 8e-022
gb|DN604565.1|DN604565 JCAt4g23980 Arabidopsis Gateway cDNA... 106 1e-021
gb|BX840901.1|BX840901 BX840901 Arabidopsis thaliana Flower... 106 1e-021
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 106 1e-021
gb|BX840815.1|BX840815 BX840815 Arabidopsis thaliana Flower... 92 9e-021
>ref|NM_180913.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2); transcription
factor AT5G62000 (ARF2) transcript variant AT5G62000.1
mRNA, complete cds
Length = 3513
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 1123 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 1302
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 1303 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 1482
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 1483 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1581
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -2
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1580 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 1401
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 1400 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 1221
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 1220 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 1125
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -1
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1578 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 1399
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 1398 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 1219
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 1218 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 1123
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +3
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 1323 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1502
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1503 QNEI*RRRGS*AEVYWHNRW 1562
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +1
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1588 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1698
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +1
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1696 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1875
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1876 KHTESVECDAPENSVVWQSSADDDKV 1953
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +3
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 1140 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 1286
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1697 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1587
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1680 LYFPRRYSIRSRNTRSLIPSHLEGSP 1603
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -1
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1902 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1771
>gb|BT000784.1| Arabidopsis thaliana clone RAFL07-10-G12 (R10939) auxin response
factor (At5g62000) mRNA, complete cds
Length = 3498
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 1123 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 1302
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 1303 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 1482
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 1483 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1581
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -2
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1580 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 1401
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 1400 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 1221
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 1220 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 1125
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -1
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1578 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 1399
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 1398 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 1219
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 1218 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 1123
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +3
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 1323 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1502
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1503 QNEI*RRRGS*AEVYWHNRW 1562
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +1
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1588 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1698
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +1
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1696 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1875
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1876 KHTESVECDAPENSVVWQSSADDDKV 1953
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +3
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 1140 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 1286
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1697 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1587
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1680 LYFPRRYSIRSRNTRSLIPSHLEGSP 1603
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -1
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1902 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1771
>ref|NM_203251.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2) AT5G62000 (ARF2)
transcript variant AT5G62000.3 mRNA, complete cds
Length = 3387
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 997 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 1176
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 1177 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 1356
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 1357 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1455
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -2
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1454 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 1275
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 1274 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 1095
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 1094 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 999
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -1
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1452 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 1273
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 1272 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 1093
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 1092 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 997
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +3
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 1197 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1376
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1377 QNEI*RRRGS*AEVYWHNRW 1436
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +1
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1462 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1572
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +1
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1570 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1749
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1750 KHTESVECDAPENSVVWQSSADDDKV 1827
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +3
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 1014 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 1160
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1571 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1461
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1554 LYFPRRYSIRSRNTRSLIPSHLEGSP 1477
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -1
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1776 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1645
>emb|CS165494.1| Sequence 2 from Patent WO2005085453
Length = 3384
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 997 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 1176
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 1177 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 1356
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 1357 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1455
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -2
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1454 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 1275
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 1274 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 1095
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 1094 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 999
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -1
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1452 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 1273
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 1272 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 1093
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 1092 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 997
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +3
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 1197 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1376
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1377 QNEI*RRRGS*AEVYWHNRW 1436
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +1
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1462 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1572
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +1
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1570 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1749
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1750 KHTESVECDAPENSVVWQSSADDDKV 1827
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +3
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 1014 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 1160
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1571 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1461
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1554 LYFPRRYSIRSRNTRSLIPSHLEGSP 1477
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -1
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1776 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1645
>ref|NM_125593.2| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2); transcription
factor AT5G62000 (ARF2) transcript variant AT5G62000.2
mRNA, complete cds
Length = 3384
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 997 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 1176
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 1177 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 1356
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 1357 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1455
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -2
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1454 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 1275
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 1274 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 1095
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 1094 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 999
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -1
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1452 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 1273
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 1272 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 1093
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 1092 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 997
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +3
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 1197 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1376
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1377 QNEI*RRRGS*AEVYWHNRW 1436
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +1
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1462 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1572
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +1
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1570 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1749
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1750 KHTESVECDAPENSVVWQSSADDDKV 1827
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +3
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 1014 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 1160
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1571 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1461
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1554 LYFPRRYSIRSRNTRSLIPSHLEGSP 1477
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -1
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1776 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1645
>dbj|AK221305.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-31-F22
Length = 3335
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 931 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 1110
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 1111 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 1290
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 1291 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1389
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -1
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1388 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 1209
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 1208 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 1029
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 1028 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 933
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -3
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1386 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 1207
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 1206 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 1027
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 1026 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 931
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +3
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 1131 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1310
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1311 QNEI*RRRGS*AEVYWHNRW 1370
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +1
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1396 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1506
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +1
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1504 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1683
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1684 KHTESVECDAPENSVVWQSSADDDKV 1761
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +3
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 948 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 1094
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -1
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1505 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1395
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -3
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1488 LYFPRRYSIRSRNTRSLIPSHLEGSP 1411
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -3
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1710 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1579
>dbj|AK221252.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-07-O11
Length = 3317
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +3
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 960 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 1139
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 1140 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 1319
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 1320 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1418
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -2
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1417 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 1238
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 1237 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 1058
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 1057 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 962
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -1
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1415 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 1236
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 1235 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 1056
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 1055 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 960
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +2
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 1160 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1339
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1340 QNEI*RRRGS*AEVYWHNRW 1399
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +3
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1425 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1535
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +3
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1533 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1712
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1713 KHTESVECDAPENSVVWQSSADDDKV 1790
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +2
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 977 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 1123
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1534 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1424
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1517 LYFPRRYSIRSRNTRSLIPSHLEGSP 1440
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -1
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1739 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1608
>dbj|AK221254.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-09-L23
Length = 3317
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +3
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 960 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 1139
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 1140 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 1319
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 1320 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1418
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -2
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1417 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 1238
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 1237 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 1058
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 1057 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 962
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -1
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1415 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 1236
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 1235 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 1056
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 1055 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 960
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +2
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 1160 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1339
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1340 QNEI*RRRGS*AEVYWHNRW 1399
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +3
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1425 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1535
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +3
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1533 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1712
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1713 KHTESVECDAPENSVVWQSSADDDKV 1790
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +2
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 977 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 1123
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1534 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1424
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1517 LYFPRRYSIRSRNTRSLIPSHLEGSP 1440
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -1
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1739 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1608
>dbj|AK221274.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-16-M02
Length = 3317
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +3
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 960 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 1139
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 1140 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 1319
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 1320 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1418
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -2
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1417 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 1238
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 1237 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 1058
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 1057 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 962
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -1
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1415 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 1236
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 1235 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 1056
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 1055 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 960
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +2
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 1160 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1339
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1340 QNEI*RRRGS*AEVYWHNRW 1399
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +3
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1425 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1535
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +3
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1533 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1712
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1713 KHTESVECDAPENSVVWQSSADDDKV 1790
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +2
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 977 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 1123
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1534 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1424
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1517 LYFPRRYSIRSRNTRSLIPSHLEGSP 1440
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -1
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1739 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1608
>dbj|AK221277.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-18-M11
Length = 3316
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +3
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 912 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 1091
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 1092 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 1271
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 1272 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1370
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -1
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1369 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 1190
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 1189 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 1010
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 1009 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 914
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -3
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1367 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 1188
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 1187 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 1008
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 1007 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 912
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +2
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 1112 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1291
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1292 QNEI*RRRGS*AEVYWHNRW 1351
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +3
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1377 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1487
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +3
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1485 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1664
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1665 KHTESVECDAPENSVVWQSSADDDKV 1742
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +2
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 929 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 1075
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -1
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1486 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1376
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -3
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1469 LYFPRRYSIRSRNTRSLIPSHLEGSP 1392
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -3
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1691 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1560
>dbj|AK221282.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-19-K22
Length = 3275
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 910 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 1089
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 1090 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 1269
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 1270 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1368
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -1
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1367 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 1188
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 1187 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 1008
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 1007 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 912
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -3
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1365 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 1186
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 1185 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 1006
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 1005 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 910
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +3
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 1110 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1289
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1290 QNEI*RRRGS*AEVYWHNRW 1349
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +1
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1375 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1485
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +1
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1483 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1662
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1663 KHTESVECDAPENSVVWQSSADDDKV 1740
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +3
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 927 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 1073
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -1
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1484 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1374
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -3
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1467 LYFPRRYSIRSRNTRSLIPSHLEGSP 1390
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -3
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1689 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1558
>gb|AF378862.1|AF378862 Arabidopsis thaliana AT5g62000/mtg10_20 mRNA, complete cds
Length = 3171
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +2
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 962 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 1141
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 1142 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 1321
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 1322 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1420
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -1
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1419 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 1240
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 1239 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 1060
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 1059 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 964
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -3
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1417 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 1238
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 1237 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 1058
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 1057 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 962
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +1
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 1162 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1341
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1342 QNEI*RRRGS*AEVYWHNRW 1401
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +2
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1427 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1537
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +2
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1535 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1714
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1715 KHTESVECDAPENSVVWQSSADDDKV 1792
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +1
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 979 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 1125
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -1
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1536 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1426
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -3
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1519 LYFPRRYSIRSRNTRSLIPSHLEGSP 1442
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -3
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1741 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1610
>gb|AY669787.1| Arabidopsis thaliana clone C105342 ARF2 (At5g62000) mRNA, complete
cds
Length = 2772
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 622 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 801
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 802 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 981
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 982 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1080
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -2
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1079 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 900
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 899 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 720
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 719 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 624
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -1
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1077 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 898
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 897 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 718
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 717 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 622
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +3
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 822 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1001
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1002 QNEI*RRRGS*AEVYWHNRW 1061
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +1
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1087 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1197
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +1
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1195 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1374
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1375 KHTESVECDAPENSVVWQSSADDDKV 1452
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +3
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 639 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 785
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1196 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1086
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1179 LYFPRRYSIRSRNTRSLIPSHLEGSP 1102
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -1
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1401 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1270
>emb|CS165547.1| Sequence 55 from Patent WO2005085453
Length = 2580
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 622 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 801
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 802 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 981
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 982 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1080
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -2
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1079 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 900
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 899 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 720
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 719 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 624
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -1
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1077 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 898
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 897 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 718
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 717 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 622
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +3
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 822 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1001
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1002 QNEI*RRRGS*AEVYWHNRW 1061
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +1
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1087 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1197
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +1
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1195 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1374
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1375 KHTESVECDAPENSVVWQSSADDDKV 1452
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +3
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 639 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 785
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1196 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1086
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1179 LYFPRRYSIRSRNTRSLIPSHLEGSP 1102
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -1
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1401 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1270
>emb|CS165497.1| Sequence 5 from Patent WO2005085453
Length = 2576
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +3
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 618 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 797
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 798 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 977
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 978 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1076
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -2
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1075 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 896
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 895 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 716
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 715 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 620
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -1
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1073 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 894
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 893 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 714
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 713 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 618
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +2
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 818 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 997
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 998 QNEI*RRRGS*AEVYWHNRW 1057
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +3
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1083 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1193
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +3
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1191 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1370
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1371 KHTESVECDAPENSVVWQSSADDDKV 1448
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +2
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 635 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 781
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1192 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1082
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1175 LYFPRRYSIRSRNTRSLIPSHLEGSP 1098
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -1
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1397 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1266
>emb|CS165548.1| Sequence 56 from Patent WO2005085453
Length = 2576
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +3
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 618 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 797
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 798 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 977
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 978 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1076
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -2
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1075 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 896
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 895 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 716
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 715 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 620
Score = 173 bits (373), Expect(2) = 1e-045
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = -1 / -1
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+++F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1073 IRLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 894
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 893 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 714
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 713 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 618
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +2
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 818 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 997
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 998 QNEI*RRRGS*AEVYWHNRW 1057
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +3
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1083 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1193
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +3
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1191 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1370
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1371 KHTESVECDAPENSVVWQSSADDDKV 1448
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +2
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 635 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 781
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1192 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1082
Score = 32.7 bits (65), Expect(2) = 1e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1175 LYFPRRYSIRSRNTRSLIPSHLEGSP 1098
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -1
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1397 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1266
>gb|BT001072.1| Arabidopsis thaliana At5g62000/mtg10_20 mRNA, complete cds
Length = 2037
Score = 314 bits (681), Expect(3) = e-119
Identities = 129/153 (84%), Positives = 134/153 (87%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR
Sbjct: 622 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 801
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MHLGVLATAWHAI+T +MFTVYYKPRTSPSEFI+P+DQYMESVKNN
Sbjct: 802 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 981
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDP 459
YSIGMRF+MRFEGEEAPEQRFTGTIVG E DP
Sbjct: 982 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP 1080
Score = 221 bits (477), Expect(3) = 4e-068
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = -2 / -2
Query: 458 GSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TV 279
GS S PTIVPVNLCSGA IE*LF TDSIY*S G INS+GLVLGL**TV
Sbjct: 1079 GSDSSIPTIVPVNLCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVLGL**TV 900
Query: 278 NMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSL 99
N+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPLR + ASPATSL
Sbjct: 899 NIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPLRNINASPATSL 720
Query: 98 LELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LELT TL PL +CL G PR + NRHS C+
Sbjct: 719 LELTNTLHPLCSKCLRG*PRNICLNRHSFACK 624
Score = 171 bits (369), Expect(2) = 5e-045
Identities = 75/152 (49%), Positives = 100/152 (65%)
Frame = -1 / -1
Query: 456 VKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSE 277
+ +F N C SKPLL LF FK H ESH NR+++ LHILI N+KL ARP VVD +
Sbjct: 1077 IGLFNPNDCASKPLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPGFVVDCK 898
Query: 276 HGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPF 97
H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + + + ++ N PF
Sbjct: 897 HSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAP*KYKRIACN*PF 718
Query: 96 GTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
G +K+TP TL +MPP L E ++ESPL MQI
Sbjct: 717 GANKHTPPTL*QMPPWLTPEYMSESPLICMQI 622
Score = 88.0 bits (186), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3 / +3
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F YI*P HAS + MA ++ +V+ LLQ DEP VY S+ S+YGV + L YW EI
Sbjct: 822 FCYI*P*HASWSTGHRMACHFNRDYVYSLLQTQDEPI*VYCSVRSVYGVC*E*LLYWHEI 1001
Query: 381 QDEV*RGRGPRAEVYWYNSW 440
Q+E+*R RG AEVYW+N W
Sbjct: 1002 QNEI*RRRGS*AEVYWHNRW 1061
Score = 82.1 bits (173), Expect(3) = e-119
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1 / +1
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP 573
WP S WR LKVRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 1087 WPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 1197
Score = 76.6 bits (161), Expect(3) = e-119
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1 / +1
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRN 747
P ++P+P+ R KRPR N P SP+SS+LT+EG TK + D + VLQ QE + R
Sbjct: 1195 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRT 1374
Query: 748 NLTESTDSDSTVQKQMMWSPSPNGKV 825
TES + D+ + S + + KV
Sbjct: 1375 KHTESVECDAPENSVVWQSSADDDKV 1452
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3 / +3
Query: 18 VAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC 164
VAI ++P +T EA +EW+EC C QKA C R ++ + R+ SWC
Sbjct: 639 VAIQTYIPGSTTEAFATEWVECVC*LQKASCRRCVYISKGREWRIKSWC 785
Score = 49.6 bits (102), Expect(3) = 4e-068
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGH 462
GG AGS F G+TLSGRGI+E SS T + L + GH
Sbjct: 1196 GGARAGSTFHGDTLSGRGILEVSSHLTLRDLHFDFGH 1086
Score = 32.7 bits (65), Expect(2) = 5e-045
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LY P R I R++R LIP+HL+ SP
Sbjct: 1179 LYFPRRYSIRSRNTRSLIPSHLEGSP 1102
Score = 29.5 bits (58), Expect(3) = 4e-068
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1 / -1
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCENR 643
I + S P+ + LTLQD C R+ + L CTF ++R
Sbjct: 1401 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTFSGKHR 1270
>emb|CS165493.1| Sequence 1 from Patent WO2005085453
Length = 8718
Score = 102 bits (217), Expect(5) = 4e-049
Identities = 45/60 (75%), Positives = 50/60 (83%)
Frame = -2 / -3
Query: 299 LGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMK 120
LGL**TVN+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPL K+K
Sbjct: 5959 LGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPL*KIK 5780
Score = 99.5 bits (211), Expect(9) = 4e-090
Identities = 42/59 (71%), Positives = 44/59 (74%)
Frame = +1 / +3
Query: 124 IFLRGENGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPR 300
IF RGENGELRVGVRRAMRQ MHLGVLATAWHAI+T +MFTVYYKPR
Sbjct: 5784 IFYRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPR 5960
Score = 98.1 bits (208), Expect(9) = 4e-090
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +1 / +2
Query: 298 RTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 420
RTSPSEFI+P+DQYMESVKNNYSIGMRF+MRFEGEEAPEQR
Sbjct: 6092 RTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQR 6214
Score = 75.7 bits (159), Expect(9) = 4e-090
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1 / +2
Query: 43 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 135
GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR
Sbjct: 5624 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 5716
Score = 70.2 bits (147), Expect(5) = 1e-025
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = -1 / -2
Query: 303 RPRLVVDSEHGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEEN 124
+P VVD +H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + E+
Sbjct: 5963 KPGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAPVED 5784
Score = 62.4 bits (130), Expect(9) = 4e-090
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = +1 / +3
Query: 490 KVRWDEPSTIPRPDKVSPWKIEPASSPP 573
+VRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 6456 QVRWDETSSIPRPDRVSPWKVEPALAPP 6539
Score = 54.2 bits (112), Expect(5) = 4e-049
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = -1 / -3
Query: 420 PLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEH 274
PLL LF FK H ESH NR+++ LHILI N+KL ARP L + H
Sbjct: 6214 PLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPVLNKTTPH 6068
Score = 50.1 bits (103), Expect(9) = 4e-090
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +1 / +3
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEG 663
P ++P+P+ R KRPR N P SP+SS+LT+EG
Sbjct: 6537 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREG 6632
Score = 48.2 bits (99), Expect(5) = 1e-025
Identities = 25/41 (60%), Positives = 26/41 (63%)
Frame = -2 / -1
Query: 419 LCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVL 297
LCSGA IE*LF TDSIY*S G INS+GLVL
Sbjct: 6213 LCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVL 6091
Score = 47.3 bits (97), Expect(5) = 4e-049
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 134 LRKMKASPATSLLELTKTLQPL*RRCLLGCP 42
LR + ASPATSLLELT TL PL +CL G P
Sbjct: 5715 LRNINASPATSLLELTNTLHPLCSKCLRG*P 5623
Score = 43.2 bits (88), Expect(5) = 4e-049
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -2 / -3
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQ 477
GG AGS F G+TLSGRGI+E SS T K ++
Sbjct: 6538 GGARAGSTFHGDTLSGRGILEVSSHLT*KTIE 6443
Score = 38.2 bits (77), Expect(9) = 4e-090
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRG 45
DLH EWRFRHIFRG
Sbjct: 5488 DLHANEWRFRHIFRG 5532
Score = 35.0 bits (70), Expect(9) = 4e-090
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1 / +3
Query: 646 VLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRNNLTESTDSDSTVQKQMMWSPSPNGKV 825
++ K G TK + D + VLQ QE + R TES + D+ + S + + KV
Sbjct: 6711 IVHKTGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTESVECDAPENSVVWQSSADDDKV 6890
Score = 35.0 bits (70), Expect(5) = 1e-025
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -1 / -3
Query: 117 VSSNKPFGTDKNTPTTLKEMPPGL 46
++ N PFG +K+TP TL +MPP L
Sbjct: 5698 IACN*PFGANKHTPPTL*QMPPWL 5627
Score = 29.0 bits (57), Expect(5) = 1e-025
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCEN 646
I + S P+ + LTLQD C R+ + L CT F N
Sbjct: 6839 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTCFVYN 6711
Score = 28.6 bits (56), Expect(9) = 4e-090
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / +2
Query: 418 RFTGTIVGCENLDP 459
RFTGTIVG E DP
Sbjct: 6305 RFTGTIVGIEESDP 6346
Score = 28.6 bits (56), Expect(5) = 1e-025
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1 / -2
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQ 487
LY P R I R++R LIP+HL+
Sbjct: 6521 LYFPRRYSIRSRNTRSLIPSHLK 6453
Score = 24.9 bits (48), Expect(9) = 4e-090
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1 / +2
Query: 463 WPDSSWRYLKV 495
WP S WR LKV
Sbjct: 6353 WPKSKWRSLKV 6385
Score = 24.9 bits (48), Expect(5) = 4e-049
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -1
Query: 458 GSRFSQPTIVPVNL 417
GS S PTIVPVNL
Sbjct: 6345 GSDSSIPTIVPVNL 6304
>emb|CS165496.1| Sequence 4 from Patent WO2005085453
Length = 8718
Score = 102 bits (217), Expect(5) = 4e-049
Identities = 45/60 (75%), Positives = 50/60 (83%)
Frame = -2 / -3
Query: 299 LGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMK 120
LGL**TVN+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPL K+K
Sbjct: 5959 LGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPL*KIK 5780
Score = 99.5 bits (211), Expect(9) = 4e-090
Identities = 42/59 (71%), Positives = 44/59 (74%)
Frame = +1 / +3
Query: 124 IFLRGENGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPR 300
IF RGENGELRVGVRRAMRQ MHLGVLATAWHAI+T +MFTVYYKPR
Sbjct: 5784 IFYRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPR 5960
Score = 98.1 bits (208), Expect(9) = 4e-090
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +1 / +2
Query: 298 RTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 420
RTSPSEFI+P+DQYMESVKNNYSIGMRF+MRFEGEEAPEQR
Sbjct: 6092 RTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQR 6214
Score = 75.7 bits (159), Expect(9) = 4e-090
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1 / +2
Query: 43 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 135
GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR
Sbjct: 5624 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 5716
Score = 70.2 bits (147), Expect(5) = 1e-025
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = -1 / -2
Query: 303 RPRLVVDSEHGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEEN 124
+P VVD +H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + E+
Sbjct: 5963 KPGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAPVED 5784
Score = 62.4 bits (130), Expect(9) = 4e-090
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = +1 / +3
Query: 490 KVRWDEPSTIPRPDKVSPWKIEPASSPP 573
+VRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 6456 QVRWDETSSIPRPDRVSPWKVEPALAPP 6539
Score = 54.2 bits (112), Expect(5) = 4e-049
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = -1 / -3
Query: 420 PLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEH 274
PLL LF FK H ESH NR+++ LHILI N+KL ARP L + H
Sbjct: 6214 PLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPVLNKTTPH 6068
Score = 50.1 bits (103), Expect(9) = 4e-090
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +1 / +3
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEG 663
P ++P+P+ R KRPR N P SP+SS+LT+EG
Sbjct: 6537 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREG 6632
Score = 48.2 bits (99), Expect(5) = 1e-025
Identities = 25/41 (60%), Positives = 26/41 (63%)
Frame = -2 / -1
Query: 419 LCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVL 297
LCSGA IE*LF TDSIY*S G INS+GLVL
Sbjct: 6213 LCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVL 6091
Score = 47.3 bits (97), Expect(5) = 4e-049
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 134 LRKMKASPATSLLELTKTLQPL*RRCLLGCP 42
LR + ASPATSLLELT TL PL +CL G P
Sbjct: 5715 LRNINASPATSLLELTNTLHPLCSKCLRG*P 5623
Score = 43.2 bits (88), Expect(5) = 4e-049
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -2 / -3
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQ 477
GG AGS F G+TLSGRGI+E SS T K ++
Sbjct: 6538 GGARAGSTFHGDTLSGRGILEVSSHLT*KTIE 6443
Score = 38.2 bits (77), Expect(9) = 4e-090
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRG 45
DLH EWRFRHIFRG
Sbjct: 5488 DLHANEWRFRHIFRG 5532
Score = 35.0 bits (70), Expect(9) = 4e-090
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1 / +3
Query: 646 VLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRNNLTESTDSDSTVQKQMMWSPSPNGKV 825
++ K G TK + D + VLQ QE + R TES + D+ + S + + KV
Sbjct: 6711 IVHKTGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTESVECDAPENSVVWQSSADDDKV 6890
Score = 35.0 bits (70), Expect(5) = 1e-025
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -1 / -3
Query: 117 VSSNKPFGTDKNTPTTLKEMPPGL 46
++ N PFG +K+TP TL +MPP L
Sbjct: 5698 IACN*PFGANKHTPPTL*QMPPWL 5627
Score = 29.0 bits (57), Expect(5) = 1e-025
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCEN 646
I + S P+ + LTLQD C R+ + L CT F N
Sbjct: 6839 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTCFVYN 6711
Score = 28.6 bits (56), Expect(9) = 4e-090
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / +2
Query: 418 RFTGTIVGCENLDP 459
RFTGTIVG E DP
Sbjct: 6305 RFTGTIVGIEESDP 6346
Score = 28.6 bits (56), Expect(5) = 1e-025
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1 / -2
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQ 487
LY P R I R++R LIP+HL+
Sbjct: 6521 LYFPRRYSIRSRNTRSLIPSHLK 6453
Score = 24.9 bits (48), Expect(9) = 4e-090
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1 / +2
Query: 463 WPDSSWRYLKV 495
WP S WR LKV
Sbjct: 6353 WPKSKWRSLKV 6385
Score = 24.9 bits (48), Expect(5) = 4e-049
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -1
Query: 458 GSRFSQPTIVPVNL 417
GS S PTIVPVNL
Sbjct: 6345 GSDSSIPTIVPVNL 6304
>dbj|AB016880.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTG10
Length = 81284
Score = 102 bits (217), Expect(5) = 4e-049
Identities = 45/60 (75%), Positives = 50/60 (83%)
Frame = -2 / -3
Query: 299 LGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMK 120
LGL**TVN+ V +ACHAVA TPRCMLWLDITE+GT C IARLTPT +SPFSPL K+K
Sbjct: 15180 LGL**TVNIVPVEMACHAVASTPRCMLWLDITEDGTFPCCRIARLTPTLNSPFSPL*KIK 15001
Score = 99.5 bits (211), Expect(8) = 6e-082
Identities = 42/59 (71%), Positives = 44/59 (74%)
Frame = +1 / +2
Query: 124 IFLRGENGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPR 300
IF RGENGELRVGVRRAMRQ MHLGVLATAWHAI+T +MFTVYYKPR
Sbjct: 15005 IFYRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPR 15181
Score = 98.1 bits (208), Expect(8) = 6e-082
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +1 / +1
Query: 298 RTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 420
RTSPSEFI+P+DQYMESVKNNYSIGMRF+MRFEGEEAPEQR
Sbjct: 15313 RTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQR 15435
Score = 75.7 bits (159), Expect(8) = 6e-082
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1 / +1
Query: 43 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 135
GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR
Sbjct: 14845 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 14937
Score = 70.2 bits (147), Expect(5) = 5e-022
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = -1 / -2
Query: 303 RPRLVVDSEHGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEEN 124
+P VVD +H C N +PC + +MHA+ARYNRRR++ L H P TNS F++ + E+
Sbjct: 15184 KPGFVVDCKHSPC*NGMPCGGQYSKMHAMARYNRRRHVSLLSHRTPYTNS*FSILAPVED 15005
Score = 62.4 bits (130), Expect(8) = 6e-082
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = +1 / +2
Query: 490 KVRWDEPSTIPRPDKVSPWKIEPASSPP 573
+VRWDE S+IPRPD+VSPWK+EPA +PP
Sbjct: 15677 QVRWDETSSIPRPDRVSPWKVEPALAPP 15760
Score = 54.2 bits (112), Expect(5) = 4e-049
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = -1 / -3
Query: 420 PLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEH 274
PLL LF FK H ESH NR+++ LHILI N+KL ARP L + H
Sbjct: 15435 PLLRSLFAFKSHFESHANRVVILNRLHILIERNNKLRWARPVLNKTTPH 15289
Score = 50.1 bits (103), Expect(8) = 6e-082
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +1 / +2
Query: 568 PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEG 663
P ++P+P+ R KRPR N P SP+SS+LT+EG
Sbjct: 15758 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREG 15853
Score = 48.2 bits (99), Expect(5) = 5e-022
Identities = 25/41 (60%), Positives = 26/41 (63%)
Frame = -2 / -1
Query: 419 LCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVL 297
LCSGA IE*LF TDSIY*S G INS+GLVL
Sbjct: 15434 LCSGASSPSNLILNLMPIE*LFLTDSIY*SNGTINSDGLVL 15312
Score = 47.3 bits (97), Expect(5) = 4e-049
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 134 LRKMKASPATSLLELTKTLQPL*RRCLLGCP 42
LR + ASPATSLLELT TL PL +CL G P
Sbjct: 14936 LRNINASPATSLLELTNTLHPLCSKCLRG*P 14844
Score = 43.2 bits (88), Expect(5) = 4e-049
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -2 / -3
Query: 572 GGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQ 477
GG AGS F G+TLSGRGI+E SS T K ++
Sbjct: 15759 GGARAGSTFHGDTLSGRGILEVSSHLT*KTIE 15664
Score = 38.2 bits (77), Expect(8) = 6e-082
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 1 DLHGMEWRFRHIFRG 45
DLH EWRFRHIFRG
Sbjct: 14709 DLHANEWRFRHIFRG 14753
Score = 35.0 bits (70), Expect(5) = 5e-022
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -1 / -3
Query: 117 VSSNKPFGTDKNTPTTLKEMPPGL 46
++ N PFG +K+TP TL +MPP L
Sbjct: 14919 IACN*PFGANKHTPPTL*QMPPWL 14848
Score = 35.0 bits (70), Expect(8) = 6e-082
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1 / +2
Query: 646 VLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRNNLTESTDSDSTVQKQMMWSPSPNGKV 825
++ K G TK + D + VLQ QE + R TES + D+ + S + + KV
Sbjct: 15932 IVHKTGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTESVECDAPENSVVWQSSADDDKV 16111
Score = 29.0 bits (57), Expect(5) = 5e-022
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 774 IRVGAFSQVVPKAHLLLTLQDRILMWCLSRISINLGCTFFCEN 646
I + S P+ + LTLQD C R+ + L CT F N
Sbjct: 16060 ITLYTLSMFRPQGRVFLTLQDP*KSACW*RVHVCLSCTCFVYN 15932
Score = 28.6 bits (56), Expect(5) = 5e-022
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1 / -2
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQ 487
LY P R I R++R LIP+HL+
Sbjct: 15742 LYFPRRYSIRSRNTRSLIPSHLK 15674
Score = 28.6 bits (56), Expect(8) = 6e-082
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / +1
Query: 418 RFTGTIVGCENLDP 459
RFTGTIVG E DP
Sbjct: 15526 RFTGTIVGIEESDP 15567
Score = 24.9 bits (48), Expect(5) = 4e-049
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -1
Query: 458 GSRFSQPTIVPVNL 417
GS S PTIVPVNL
Sbjct: 15566 GSDSSIPTIVPVNL 15525
>ref|NM_130218.3| Arabidopsis thaliana ARF11 (AUXIN RESPONSE FACTOR 11); transcription
factor AT2G46530 (ARF11) transcript variant AT2G46530.1
mRNA, complete cds
Length = 2425
Score = 167 bits (360), Expect(2) = 8e-079
Identities = 67/102 (65%), Positives = 77/102 (75%)
Frame = +1 / +3
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGE G+LRVGVRR +
Sbjct: 819 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAK 998
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
Q M LGVLATA HA+ T ++F V+YKPR S
Sbjct: 999 QQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRIS 1124
Score = 149 bits (321), Expect(2) = 8e-079
Identities = 55/105 (52%), Positives = 79/105 (75%)
Frame = +1 / +3
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FII ++YM ++KN +S+GMR+RMRFEGEE+PE+ FTGTI+G +L WP S WR L
Sbjct: 1122 SQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPASKWRSL 1301
Query: 490 KVRWDEPSTIPRPDKVSPWKIEPASSPPVNPLPLSRGKRPRQNAP 624
+++WDEPS+I RP+KVSPW+IEP S + P P + + +++ P
Sbjct: 1302 QIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKRSRP 1436
Score = 118 bits (253), Expect(2) = 6e-036
Identities = 56/101 (55%), Positives = 69/101 (68%)
Frame = -2 / -1
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
L+LGL* T N+ V+ A AVARTP+ +L L+IT+ G + CL RLTPTR SP SPL+
Sbjct: 1123 LILGL*KTTNIVVVVTA*EAVARTPKRIL*LEITDAGIVLCCLAKRLTPTRKSPVSPLKN 944
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
ASPATSL E+T LQP+ +CLLGCP + N HS P R
Sbjct: 943 TNASPATSLFEVTNVLQPVVSKCLLGCPLNICLNLHS*P*R 821
Score = 55.1 bits (114), Expect(2) = 6e-036
Identities = 28/60 (46%), Positives = 34/60 (56%)
Frame = -2 / -1
Query: 587 GRGLTGGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
G G++ E GSI GETL G I +GSS L LE+GH R P +VPVN+ SG
Sbjct: 1399 GVGVSADGEKGSISHGETLFGLCIEDGSSHWICNDLHLEAGH*EDRSPLPIMVPVNILSG 1220
>ref|NM_201972.1| Arabidopsis thaliana ARF11 (AUXIN RESPONSE FACTOR 11); transcription
factor AT2G46530 (ARF11) transcript variant AT2G46530.2
mRNA, complete cds
Length = 2413
Score = 167 bits (360), Expect(2) = 8e-079
Identities = 67/102 (65%), Positives = 77/102 (75%)
Frame = +1 / +3
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGE G+LRVGVRR +
Sbjct: 807 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAK 986
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
Q M LGVLATA HA+ T ++F V+YKPR S
Sbjct: 987 QQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRIS 1112
Score = 149 bits (321), Expect(2) = 8e-079
Identities = 55/105 (52%), Positives = 79/105 (75%)
Frame = +1 / +3
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FII ++YM ++KN +S+GMR+RMRFEGEE+PE+ FTGTI+G +L WP S WR L
Sbjct: 1110 SQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPASKWRSL 1289
Query: 490 KVRWDEPSTIPRPDKVSPWKIEPASSPPVNPLPLSRGKRPRQNAP 624
+++WDEPS+I RP+KVSPW+IEP S + P P + + +++ P
Sbjct: 1290 QIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKRSRP 1424
Score = 118 bits (253), Expect(2) = 6e-036
Identities = 56/101 (55%), Positives = 69/101 (68%)
Frame = -2 / -1
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
L+LGL* T N+ V+ A AVARTP+ +L L+IT+ G + CL RLTPTR SP SPL+
Sbjct: 1111 LILGL*KTTNIVVVVTA*EAVARTPKRIL*LEITDAGIVLCCLAKRLTPTRKSPVSPLKN 932
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
ASPATSL E+T LQP+ +CLLGCP + N HS P R
Sbjct: 931 TNASPATSLFEVTNVLQPVVSKCLLGCPLNICLNLHS*P*R 809
Score = 55.1 bits (114), Expect(2) = 6e-036
Identities = 28/60 (46%), Positives = 34/60 (56%)
Frame = -2 / -1
Query: 587 GRGLTGGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
G G++ E GSI GETL G I +GSS L LE+GH R P +VPVN+ SG
Sbjct: 1387 GVGVSADGEKGSISHGETLFGLCIEDGSSHWICNDLHLEAGH*EDRSPLPIMVPVNILSG 1208
>ref|NM_116048.2| Arabidopsis thaliana ARF18; transcription factor AT3G61830 (ARF18)
mRNA, complete cds
Length = 2347
Score = 174 bits (376), Expect(2) = 8e-079
Identities = 70/102 (68%), Positives = 78/102 (76%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLHG EWRF+HIFRGQPRRHLL +GWS FVSSKRLVAGDAF+FLRGENG+LRVGVRR R
Sbjct: 796 DLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLAR 975
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
MHLGVLATA HA+ T ++F V+YKPR S
Sbjct: 976 HQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRIS 1101
Score = 142 bits (305), Expect(2) = 8e-079
Identities = 52/83 (62%), Positives = 69/83 (83%)
Frame = +1 / +1
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FI+ ++YME++K+ +S+G RFRMRFEGEE+PE+ FTGTIVG +L WP S WR L
Sbjct: 1099 SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTGTIVGSGDLSSQWPASKWRSL 1278
Query: 490 KVRWDEPSTIPRPDKVSPWKIEP 558
+V+WDEP+T+ RPDKVSPW+IEP
Sbjct: 1279 QVQWDEPTTVQRPDKVSPWEIEP 1347
Score = 120 bits (258), Expect(2) = 1e-037
Identities = 58/101 (57%), Positives = 67/101 (66%)
Frame = -2 / -3
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
L+LGL* T + V A AVARTP+CML L+ITE G + C RLTPTR SPFSPL+
Sbjct: 1100 LILGL*KTTKIVVVRTA*EAVARTPKCML*LEITEVGIVL*CRANRLTPTRKSPFSPLKN 921
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
KASPATSL E T LQP+ +CL GCP + N HS P R
Sbjct: 920 TKASPATSLFEDTNVLQPVVSKCLRGCPLNICLNLHSKP*R 798
Score = 78.0 bits (164), Expect(3) = 7e-022
Identities = 37/102 (36%), Positives = 58/102 (56%)
Frame = -1 / -2
Query: 306 ARPRLVVDSEHGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEE 127
A PRLV D++ C + + KN +MHAL NR R+ +P + ++N + + +E
Sbjct: 1101 AYPRLVKDNKDCCCTHSMRSCSKNSQMHALT*NNRSRHCALMPS*SSHSNP*IPILTPQE 922
Query: 126 NEGVSSNKPFGTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
++ +SS K F K TPT K+MPP L +E + + P AM+I
Sbjct: 921 HKSISSYKSFRGYKCTPTRSKQMPPWLSSEYMLKPPFKAMKI 796
Score = 58.3 bits (121), Expect(2) = 1e-037
Identities = 29/50 (58%), Positives = 31/50 (62%)
Frame = -2 / -3
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
GSI GETLSG V GSS T L LE+GH R PTIVPVN+ SG
Sbjct: 1346 GSISHGETLSGL*TVVGSSHCTCNDLHLEAGHCEDRSPLPTIVPVNILSG 1197
Score = 38.2 bits (77), Expect(3) = 7e-022
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = -1 / -2
Query: 450 IFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL 313
I T++ TSK L LF FKPH ES R + Y HIL+ N +L
Sbjct: 1239 ISTSHNRTSKYSLRRLFSFKPHSESGTERKSMLYSFHILVHPNYEL 1102
Score = 28.1 bits (55), Expect(3) = 7e-022
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1 / -2
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LYLP D IW + LIP +LQ P
Sbjct: 1344 LYLPW*DFIWSLNCCWLIPLYLQ*PP 1267
>gb|AY070463.1| Arabidopsis thaliana AT3g61830/F15G16_220 mRNA, complete cds
Length = 2331
Score = 174 bits (376), Expect(2) = 8e-079
Identities = 70/102 (68%), Positives = 78/102 (76%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLHG EWRF+HIFRGQPRRHLL +GWS FVSSKRLVAGDAF+FLRGENG+LRVGVRR R
Sbjct: 799 DLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLAR 978
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
MHLGVLATA HA+ T ++F V+YKPR S
Sbjct: 979 HQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRIS 1104
Score = 142 bits (305), Expect(2) = 8e-079
Identities = 52/83 (62%), Positives = 69/83 (83%)
Frame = +1 / +1
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FI+ ++YME++K+ +S+G RFRMRFEGEE+PE+ FTGTIVG +L WP S WR L
Sbjct: 1102 SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTGTIVGSGDLSSQWPASKWRSL 1281
Query: 490 KVRWDEPSTIPRPDKVSPWKIEP 558
+V+WDEP+T+ RPDKVSPW+IEP
Sbjct: 1282 QVQWDEPTTVQRPDKVSPWEIEP 1350
Score = 120 bits (258), Expect(2) = 1e-037
Identities = 58/101 (57%), Positives = 67/101 (66%)
Frame = -2 / -2
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
L+LGL* T + V A AVARTP+CML L+ITE G + C RLTPTR SPFSPL+
Sbjct: 1103 LILGL*KTTKIVVVRTA*EAVARTPKCML*LEITEVGIVL*CRANRLTPTRKSPFSPLKN 924
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
KASPATSL E T LQP+ +CL GCP + N HS P R
Sbjct: 923 TKASPATSLFEDTNVLQPVVSKCLRGCPLNICLNLHSKP*R 801
Score = 78.0 bits (164), Expect(3) = 7e-022
Identities = 37/102 (36%), Positives = 58/102 (56%)
Frame = -1 / -1
Query: 306 ARPRLVVDSEHGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEE 127
A PRLV D++ C + + KN +MHAL NR R+ +P + ++N + + +E
Sbjct: 1104 AYPRLVKDNKDCCCTHSMRSCSKNSQMHALT*NNRSRHCALMPS*SSHSNP*IPILTPQE 925
Query: 126 NEGVSSNKPFGTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
++ +SS K F K TPT K+MPP L +E + + P AM+I
Sbjct: 924 HKSISSYKSFRGYKCTPTRSKQMPPWLSSEYMLKPPFKAMKI 799
Score = 58.3 bits (121), Expect(2) = 1e-037
Identities = 29/50 (58%), Positives = 31/50 (62%)
Frame = -2 / -2
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
GSI GETLSG V GSS T L LE+GH R PTIVPVN+ SG
Sbjct: 1349 GSISHGETLSGL*TVVGSSHCTCNDLHLEAGHCEDRSPLPTIVPVNILSG 1200
Score = 38.2 bits (77), Expect(3) = 7e-022
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = -1 / -1
Query: 450 IFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL 313
I T++ TSK L LF FKPH ES R + Y HIL+ N +L
Sbjct: 1242 ISTSHNRTSKYSLRRLFSFKPHSESGTERKSMLYSFHILVHPNYEL 1105
Score = 28.1 bits (55), Expect(3) = 7e-022
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LYLP D IW + LIP +LQ P
Sbjct: 1347 LYLPW*DFIWSLNCCWLIPLYLQ*PP 1270
>gb|AY059746.1| Arabidopsis thaliana auxin response factor ARF18 (At3g61830) mRNA,
complete cds
Length = 2307
Score = 174 bits (376), Expect(2) = 8e-079
Identities = 70/102 (68%), Positives = 78/102 (76%)
Frame = +1 / +2
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLHG EWRF+HIFRGQPRRHLL +GWS FVSSKRLVAGDAF+FLRGENG+LRVGVRR R
Sbjct: 734 DLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLAR 913
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
MHLGVLATA HA+ T ++F V+YKPR S
Sbjct: 914 HQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRIS 1039
Score = 142 bits (305), Expect(2) = 8e-079
Identities = 52/83 (62%), Positives = 69/83 (83%)
Frame = +1 / +2
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FI+ ++YME++K+ +S+G RFRMRFEGEE+PE+ FTGTIVG +L WP S WR L
Sbjct: 1037 SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTGTIVGSGDLSSQWPASKWRSL 1216
Query: 490 KVRWDEPSTIPRPDKVSPWKIEP 558
+V+WDEP+T+ RPDKVSPW+IEP
Sbjct: 1217 QVQWDEPTTVQRPDKVSPWEIEP 1285
Score = 120 bits (258), Expect(2) = 1e-037
Identities = 58/101 (57%), Positives = 67/101 (66%)
Frame = -2 / -1
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
L+LGL* T + V A AVARTP+CML L+ITE G + C RLTPTR SPFSPL+
Sbjct: 1038 LILGL*KTTKIVVVRTA*EAVARTPKCML*LEITEVGIVL*CRANRLTPTRKSPFSPLKN 859
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
KASPATSL E T LQP+ +CL GCP + N HS P R
Sbjct: 858 TKASPATSLFEDTNVLQPVVSKCLRGCPLNICLNLHSKP*R 736
Score = 78.0 bits (164), Expect(3) = 7e-022
Identities = 37/102 (36%), Positives = 58/102 (56%)
Frame = -1 / -3
Query: 306 ARPRLVVDSEHGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEE 127
A PRLV D++ C + + KN +MHAL NR R+ +P + ++N + + +E
Sbjct: 1039 AYPRLVKDNKDCCCTHSMRSCSKNSQMHALT*NNRSRHCALMPS*SSHSNP*IPILTPQE 860
Query: 126 NEGVSSNKPFGTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
++ +SS K F K TPT K+MPP L +E + + P AM+I
Sbjct: 859 HKSISSYKSFRGYKCTPTRSKQMPPWLSSEYMLKPPFKAMKI 734
Score = 58.3 bits (121), Expect(2) = 1e-037
Identities = 29/50 (58%), Positives = 31/50 (62%)
Frame = -2 / -1
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
GSI GETLSG V GSS T L LE+GH R PTIVPVN+ SG
Sbjct: 1284 GSISHGETLSGL*TVVGSSHCTCNDLHLEAGHCEDRSPLPTIVPVNILSG 1135
Score = 38.2 bits (77), Expect(3) = 7e-022
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = -1 / -3
Query: 450 IFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL 313
I T++ TSK L LF FKPH ES R + Y HIL+ N +L
Sbjct: 1177 ISTSHNRTSKYSLRRLFSFKPHSESGTERKSMLYSFHILVHPNYEL 1040
Score = 28.1 bits (55), Expect(3) = 7e-022
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1 / -3
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LYLP D IW + LIP +LQ P
Sbjct: 1282 LYLPW*DFIWSLNCCWLIPLYLQ*PP 1205
>ref|NM_001036471.1| Arabidopsis thaliana ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor AT2G46530 (ARF11) transcript
variant AT2G46530.3 mRNA, complete cds
Length = 2171
Score = 167 bits (360), Expect(2) = 8e-079
Identities = 67/102 (65%), Positives = 77/102 (75%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGE G+LRVGVRR +
Sbjct: 565 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAK 744
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
Q M LGVLATA HA+ T ++F V+YKPR S
Sbjct: 745 QQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRIS 870
Score = 149 bits (321), Expect(2) = 8e-079
Identities = 55/105 (52%), Positives = 79/105 (75%)
Frame = +1 / +1
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FII ++YM ++KN +S+GMR+RMRFEGEE+PE+ FTGTI+G +L WP S WR L
Sbjct: 868 SQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPASKWRSL 1047
Query: 490 KVRWDEPSTIPRPDKVSPWKIEPASSPPVNPLPLSRGKRPRQNAP 624
+++WDEPS+I RP+KVSPW+IEP S + P P + + +++ P
Sbjct: 1048 QIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKRSRP 1182
Score = 118 bits (253), Expect(2) = 6e-036
Identities = 56/101 (55%), Positives = 69/101 (68%)
Frame = -2 / -1
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
L+LGL* T N+ V+ A AVARTP+ +L L+IT+ G + CL RLTPTR SP SPL+
Sbjct: 869 LILGL*KTTNIVVVVTA*EAVARTPKRIL*LEITDAGIVLCCLAKRLTPTRKSPVSPLKN 690
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
ASPATSL E+T LQP+ +CLLGCP + N HS P R
Sbjct: 689 TNASPATSLFEVTNVLQPVVSKCLLGCPLNICLNLHS*P*R 567
Score = 55.1 bits (114), Expect(2) = 6e-036
Identities = 28/60 (46%), Positives = 34/60 (56%)
Frame = -2 / -1
Query: 587 GRGLTGGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
G G++ E GSI GETL G I +GSS L LE+GH R P +VPVN+ SG
Sbjct: 1145 GVGVSADGEKGSISHGETLFGLCIEDGSSHWICNDLHLEAGH*EDRSPLPIMVPVNILSG 966
>emb|BX823552.1|CNS0A4QR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS50ZC04 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2115
Score = 174 bits (376), Expect(2) = 8e-079
Identities = 70/102 (68%), Positives = 78/102 (76%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLHG EWRF+HIFRGQPRRHLL +GWS FVSSKRLVAGDAF+FLRGENG+LRVGVRR R
Sbjct: 631 DLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLAR 810
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
MHLGVLATA HA+ T ++F V+YKPR S
Sbjct: 811 HQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRIS 936
Score = 142 bits (305), Expect(2) = 8e-079
Identities = 52/83 (62%), Positives = 69/83 (83%)
Frame = +1 / +1
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FI+ ++YME++K+ +S+G RFRMRFEGEE+PE+ FTGTIVG +L WP S WR L
Sbjct: 934 SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTGTIVGSGDLSSQWPASKWRSL 1113
Query: 490 KVRWDEPSTIPRPDKVSPWKIEP 558
+V+WDEP+T+ RPDKVSPW+IEP
Sbjct: 1114 QVQWDEPTTVQRPDKVSPWEIEP 1182
Score = 115 bits (245), Expect(2) = 9e-036
Identities = 56/101 (55%), Positives = 65/101 (64%)
Frame = -2 / -2
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
L+LGL* T + V A AVA TP+CML L+ITE G + C LTPTR SPFSPL+
Sbjct: 935 LILGL*KTTKIVVVRTA*EAVASTPKCML*LEITEVGIVL*CRANLLTPTRKSPFSPLKN 756
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
KASPATSL E T LQP+ +CL GCP + N HS P R
Sbjct: 755 TKASPATSLFEDTNVLQPVVSKCLRGCPLNICLNLHSKP*R 633
Score = 75.7 bits (159), Expect(3) = 3e-021
Identities = 36/102 (35%), Positives = 58/102 (56%)
Frame = -1 / -1
Query: 306 ARPRLVVDSEHGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEE 127
A PRLV D++ C + + K+ +MHAL NR R+ +P + ++N + + +E
Sbjct: 936 AYPRLVKDNKDCCCTHSMRSCSKHSQMHALT*NNRSRHCALMPS*SSHSNP*IPILTPQE 757
Query: 126 NEGVSSNKPFGTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
++ +SS K F K TPT K+MPP L +E + + P AM+I
Sbjct: 756 HKSISSYKSFRGYKCTPTRSKQMPPWLSSEYMLKPPFKAMKI 631
Score = 58.3 bits (121), Expect(2) = 9e-036
Identities = 29/50 (58%), Positives = 31/50 (62%)
Frame = -2 / -2
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
GSI GETLSG V GSS T L LE+GH R PTIVPVN+ SG
Sbjct: 1181 GSISHGETLSGL*TVVGSSHCTCNDLHLEAGHCEDRSPLPTIVPVNILSG 1032
Score = 38.2 bits (77), Expect(3) = 3e-021
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = -1 / -1
Query: 450 IFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL 313
I T++ TSK L LF FKPH ES R + Y HIL+ N +L
Sbjct: 1074 ISTSHNRTSKYSLRRLFSFKPHSESGTERKSMLYSFHILVHPNYEL 937
Score = 28.1 bits (55), Expect(3) = 3e-021
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LYLP D IW + LIP +LQ P
Sbjct: 1179 LYLPW*DFIWSLNCCWLIPLYLQ*PP 1102
>gb|AY669791.1| Arabidopsis thaliana clone C105346 ARF11 (At2g46530) mRNA, complete
cds
Length = 1900
Score = 167 bits (360), Expect(2) = 8e-079
Identities = 67/102 (65%), Positives = 77/102 (75%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGE G+LRVGVRR +
Sbjct: 565 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAK 744
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
Q M LGVLATA HA+ T ++F V+YKPR S
Sbjct: 745 QQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRIS 870
Score = 149 bits (321), Expect(2) = 8e-079
Identities = 55/105 (52%), Positives = 79/105 (75%)
Frame = +1 / +1
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FII ++YM ++KN +S+GMR+RMRFEGEE+PE+ FTGTI+G +L WP S WR L
Sbjct: 868 SQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPASKWRSL 1047
Query: 490 KVRWDEPSTIPRPDKVSPWKIEPASSPPVNPLPLSRGKRPRQNAP 624
+++WDEPS+I RP+KVSPW+IEP S + P P + + +++ P
Sbjct: 1048 QIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKRSRP 1182
Score = 118 bits (253), Expect(2) = 6e-036
Identities = 56/101 (55%), Positives = 69/101 (68%)
Frame = -2 / -3
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
L+LGL* T N+ V+ A AVARTP+ +L L+IT+ G + CL RLTPTR SP SPL+
Sbjct: 869 LILGL*KTTNIVVVVTA*EAVARTPKRIL*LEITDAGIVLCCLAKRLTPTRKSPVSPLKN 690
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
ASPATSL E+T LQP+ +CLLGCP + N HS P R
Sbjct: 689 TNASPATSLFEVTNVLQPVVSKCLLGCPLNICLNLHS*P*R 567
Score = 55.1 bits (114), Expect(2) = 6e-036
Identities = 28/60 (46%), Positives = 34/60 (56%)
Frame = -2 / -3
Query: 587 GRGLTGGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
G G++ E GSI GETL G I +GSS L LE+GH R P +VPVN+ SG
Sbjct: 1145 GVGVSADGEKGSISHGETLFGLCIEDGSSHWICNDLHLEAGH*EDRSPLPIMVPVNILSG 966
>gb|AY091392.1| Arabidopsis thaliana putative auxin response factor protein
(At3g61830) mRNA, complete cds
Length = 1840
Score = 174 bits (376), Expect(2) = 8e-079
Identities = 70/102 (68%), Positives = 78/102 (76%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLHG EWRF+HIFRGQPRRHLL +GWS FVSSKRLVAGDAF+FLRGENG+LRVGVRR R
Sbjct: 514 DLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLAR 693
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
MHLGVLATA HA+ T ++F V+YKPR S
Sbjct: 694 HQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRIS 819
Score = 142 bits (305), Expect(2) = 8e-079
Identities = 52/83 (62%), Positives = 69/83 (83%)
Frame = +1 / +1
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FI+ ++YME++K+ +S+G RFRMRFEGEE+PE+ FTGTIVG +L WP S WR L
Sbjct: 817 SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTGTIVGSGDLSSQWPASKWRSL 996
Query: 490 KVRWDEPSTIPRPDKVSPWKIEP 558
+V+WDEP+T+ RPDKVSPW+IEP
Sbjct: 997 QVQWDEPTTVQRPDKVSPWEIEP 1065
Score = 120 bits (258), Expect(2) = 1e-037
Identities = 58/101 (57%), Positives = 67/101 (66%)
Frame = -2 / -3
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
L+LGL* T + V A AVARTP+CML L+ITE G + C RLTPTR SPFSPL+
Sbjct: 818 LILGL*KTTKIVVVRTA*EAVARTPKCML*LEITEVGIVL*CRANRLTPTRKSPFSPLKN 639
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
KASPATSL E T LQP+ +CL GCP + N HS P R
Sbjct: 638 TKASPATSLFEDTNVLQPVVSKCLRGCPLNICLNLHSKP*R 516
Score = 78.0 bits (164), Expect(3) = 7e-022
Identities = 37/102 (36%), Positives = 58/102 (56%)
Frame = -1 / -2
Query: 306 ARPRLVVDSEHGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEE 127
A PRLV D++ C + + KN +MHAL NR R+ +P + ++N + + +E
Sbjct: 819 AYPRLVKDNKDCCCTHSMRSCSKNSQMHALT*NNRSRHCALMPS*SSHSNP*IPILTPQE 640
Query: 126 NEGVSSNKPFGTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
++ +SS K F K TPT K+MPP L +E + + P AM+I
Sbjct: 639 HKSISSYKSFRGYKCTPTRSKQMPPWLSSEYMLKPPFKAMKI 514
Score = 58.3 bits (121), Expect(2) = 1e-037
Identities = 29/50 (58%), Positives = 31/50 (62%)
Frame = -2 / -3
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
GSI GETLSG V GSS T L LE+GH R PTIVPVN+ SG
Sbjct: 1064 GSISHGETLSGL*TVVGSSHCTCNDLHLEAGHCEDRSPLPTIVPVNILSG 915
Score = 38.2 bits (77), Expect(3) = 7e-022
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = -1 / -2
Query: 450 IFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL 313
I T++ TSK L LF FKPH ES R + Y HIL+ N +L
Sbjct: 957 ISTSHNRTSKYSLRRLFSFKPHSESGTERKSMLYSFHILVHPNYEL 820
Score = 28.1 bits (55), Expect(3) = 7e-022
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1 / -2
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LYLP D IW + LIP +LQ P
Sbjct: 1062 LYLPW*DFIWSLNCCWLIPLYLQ*PP 985
>gb|AF334717.1| Arabidopsis thaliana auxin response factor ARF18 (At3g61830) mRNA,
complete cds
Length = 1809
Score = 174 bits (376), Expect(2) = 8e-079
Identities = 70/102 (68%), Positives = 78/102 (76%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLHG EWRF+HIFRGQPRRHLL +GWS FVSSKRLVAGDAF+FLRGENG+LRVGVRR R
Sbjct: 514 DLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLAR 693
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
MHLGVLATA HA+ T ++F V+YKPR S
Sbjct: 694 HQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRIS 819
Score = 142 bits (305), Expect(2) = 8e-079
Identities = 52/83 (62%), Positives = 69/83 (83%)
Frame = +1 / +1
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FI+ ++YME++K+ +S+G RFRMRFEGEE+PE+ FTGTIVG +L WP S WR L
Sbjct: 817 SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTGTIVGSGDLSSQWPASKWRSL 996
Query: 490 KVRWDEPSTIPRPDKVSPWKIEP 558
+V+WDEP+T+ RPDKVSPW+IEP
Sbjct: 997 QVQWDEPTTVQRPDKVSPWEIEP 1065
Score = 120 bits (258), Expect(2) = 1e-037
Identities = 58/101 (57%), Positives = 67/101 (66%)
Frame = -2 / -2
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
L+LGL* T + V A AVARTP+CML L+ITE G + C RLTPTR SPFSPL+
Sbjct: 818 LILGL*KTTKIVVVRTA*EAVARTPKCML*LEITEVGIVL*CRANRLTPTRKSPFSPLKN 639
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
KASPATSL E T LQP+ +CL GCP + N HS P R
Sbjct: 638 TKASPATSLFEDTNVLQPVVSKCLRGCPLNICLNLHSKP*R 516
Score = 78.0 bits (164), Expect(3) = 7e-022
Identities = 37/102 (36%), Positives = 58/102 (56%)
Frame = -1 / -1
Query: 306 ARPRLVVDSEHGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEE 127
A PRLV D++ C + + KN +MHAL NR R+ +P + ++N + + +E
Sbjct: 819 AYPRLVKDNKDCCCTHSMRSCSKNSQMHALT*NNRSRHCALMPS*SSHSNP*IPILTPQE 640
Query: 126 NEGVSSNKPFGTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
++ +SS K F K TPT K+MPP L +E + + P AM+I
Sbjct: 639 HKSISSYKSFRGYKCTPTRSKQMPPWLSSEYMLKPPFKAMKI 514
Score = 58.3 bits (121), Expect(2) = 1e-037
Identities = 29/50 (58%), Positives = 31/50 (62%)
Frame = -2 / -2
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
GSI GETLSG V GSS T L LE+GH R PTIVPVN+ SG
Sbjct: 1064 GSISHGETLSGL*TVVGSSHCTCNDLHLEAGHCEDRSPLPTIVPVNILSG 915
Score = 38.2 bits (77), Expect(3) = 7e-022
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = -1 / -1
Query: 450 IFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL 313
I T++ TSK L LF FKPH ES R + Y HIL+ N +L
Sbjct: 957 ISTSHNRTSKYSLRRLFSFKPHSESGTERKSMLYSFHILVHPNYEL 820
Score = 28.1 bits (55), Expect(3) = 7e-022
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSP 478
LYLP D IW + LIP +LQ P
Sbjct: 1062 LYLPW*DFIWSLNCCWLIPLYLQ*PP 985
>ref|NM_104668.2| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription
factor AT1G59750 (ARF1) transcript variant AT1G59750.1
mRNA, complete cds
Length = 2470
Score = 246 bits (532), Expect(2) = 2e-078
Identities = 101/149 (67%), Positives = 118/149 (79%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EW FRHIFRGQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MR
Sbjct: 754 DLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMR 933
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MH+GVLATA HAI T ++F+V+YKPRTS SEFI+ ++Y+E+
Sbjct: 934 QQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQK 1113
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCE 447
S+GMRF+MRFEGEEAPE+RF+GTIVG +
Sbjct: 1114 LSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 1200
Score = 129 bits (276), Expect(3) = 1e-036
Identities = 63/106 (59%), Positives = 77/106 (72%)
Frame = -2 / -3
Query: 320 INSEGLVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPF 141
INS+ LVLGL* T + V++A AVARTP CML L++T++G L CL+ RLTPTRSS F
Sbjct: 1073 INSDLLVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSF 894
Query: 140 SPLRKMKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
SPL+ MKASPATS ELTKTL P+ + LG PRKM HS+ C+
Sbjct: 893 SPLKNMKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCK 756
Score = 104 bits (223), Expect = 4e-021
Identities = 53/146 (36%), Positives = 80/146 (54%)
Frame = -1 / -2
Query: 438 NYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEHGLCVN 259
NYC ++P LG FP + H E+H R ++ I I ++KL* P LV D + C N
Sbjct: 1191 NYCATEPFLGSFFPLESHLETHAYRQLLGLSFEIPIDAHNKL*PTCPWLVEDRKDCSCCN 1012
Query: 258 RVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPFGTDKNT 79
+ C K+P MHA+ +R R I L H PNT S+ + + E E ++S+ +KNT
Sbjct: 1011 GMSCCCKDPNMHAMT*NDR*RDISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNT 832
Query: 78 PTTLKEMPPGLPAEDVAESPLHAMQI 1
P++ +M P L +E+V + P +QI
Sbjct: 831 PSSC*QMTPWLASENVPKMPFTIVQI 754
Score = 69.7 bits (146), Expect(2) = 2e-078
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1 / +1
Query: 445 ENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP 558
EN +W DS WR LKV+WDEPS++ RP++VSPW++EP
Sbjct: 1201 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEP 1314
Score = 39.5 bits (80), Expect(3) = 1e-036
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = -2 / -3
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFS 444
GS QGETLSGR EGSS TF L ES + FS
Sbjct: 1313 GSSSQGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS 1200
Score = 25.8 bits (50), Expect(3) = 1e-036
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 440 PTIVPVNLCSGA 405
PTIVP+NL SGA
Sbjct: 1193 PTIVPLNLFSGA 1158
>gb|AY133723.1| Arabidopsis thaliana auxin response factor 1 (At1g59750) mRNA,
complete cds
Length = 2464
Score = 246 bits (532), Expect(2) = 2e-078
Identities = 101/149 (67%), Positives = 118/149 (79%)
Frame = +1 / +3
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EW FRHIFRGQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MR
Sbjct: 756 DLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMR 935
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MH+GVLATA HAI T ++F+V+YKPRTS SEFI+ ++Y+E+
Sbjct: 936 QQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQK 1115
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCE 447
S+GMRF+MRFEGEEAPE+RF+GTIVG +
Sbjct: 1116 LSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 1202
Score = 129 bits (276), Expect(3) = 1e-036
Identities = 63/106 (59%), Positives = 77/106 (72%)
Frame = -2 / -1
Query: 320 INSEGLVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPF 141
INS+ LVLGL* T + V++A AVARTP CML L++T++G L CL+ RLTPTRSS F
Sbjct: 1075 INSDLLVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSF 896
Query: 140 SPLRKMKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
SPL+ MKASPATS ELTKTL P+ + LG PRKM HS+ C+
Sbjct: 895 SPLKNMKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCK 758
Score = 104 bits (223), Expect = 4e-021
Identities = 53/146 (36%), Positives = 80/146 (54%)
Frame = -1 / -3
Query: 438 NYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEHGLCVN 259
NYC ++P LG FP + H E+H R ++ I I ++KL* P LV D + C N
Sbjct: 1193 NYCATEPFLGSFFPLESHLETHAYRQLLGLSFEIPIDAHNKL*PTCPWLVEDRKDCSCCN 1014
Query: 258 RVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPFGTDKNT 79
+ C K+P MHA+ +R R I L H PNT S+ + + E E ++S+ +KNT
Sbjct: 1013 GMSCCCKDPNMHAMT*NDR*RDISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNT 834
Query: 78 PTTLKEMPPGLPAEDVAESPLHAMQI 1
P++ +M P L +E+V + P +QI
Sbjct: 833 PSSC*QMTPWLASENVPKMPFTIVQI 756
Score = 69.7 bits (146), Expect(2) = 2e-078
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1 / +3
Query: 445 ENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP 558
EN +W DS WR LKV+WDEPS++ RP++VSPW++EP
Sbjct: 1203 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEP 1316
Score = 39.5 bits (80), Expect(3) = 1e-036
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = -2 / -1
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFS 444
GS QGETLSGR EGSS TF L ES + FS
Sbjct: 1315 GSSSQGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS 1202
Score = 25.8 bits (50), Expect(3) = 1e-036
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -1
Query: 440 PTIVPVNLCSGA 405
PTIVP+NL SGA
Sbjct: 1195 PTIVPLNLFSGA 1160
>ref|NM_179499.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription
factor AT1G59750 (ARF1) transcript variant AT1G59750.2
mRNA, complete cds
Length = 2452
Score = 246 bits (532), Expect(2) = 2e-078
Identities = 101/149 (67%), Positives = 118/149 (79%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EW FRHIFRGQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MR
Sbjct: 754 DLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMR 933
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MH+GVLATA HAI T ++F+V+YKPRTS SEFI+ ++Y+E+
Sbjct: 934 QQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQK 1113
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCE 447
S+GMRF+MRFEGEEAPE+RF+GTIVG +
Sbjct: 1114 LSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 1200
Score = 129 bits (276), Expect(3) = 1e-036
Identities = 63/106 (59%), Positives = 77/106 (72%)
Frame = -2 / -3
Query: 320 INSEGLVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPF 141
INS+ LVLGL* T + V++A AVARTP CML L++T++G L CL+ RLTPTRSS F
Sbjct: 1073 INSDLLVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSF 894
Query: 140 SPLRKMKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
SPL+ MKASPATS ELTKTL P+ + LG PRKM HS+ C+
Sbjct: 893 SPLKNMKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCK 756
Score = 104 bits (223), Expect = 4e-021
Identities = 53/146 (36%), Positives = 80/146 (54%)
Frame = -1 / -2
Query: 438 NYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEHGLCVN 259
NYC ++P LG FP + H E+H R ++ I I ++KL* P LV D + C N
Sbjct: 1191 NYCATEPFLGSFFPLESHLETHAYRQLLGLSFEIPIDAHNKL*PTCPWLVEDRKDCSCCN 1012
Query: 258 RVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPFGTDKNT 79
+ C K+P MHA+ +R R I L H PNT S+ + + E E ++S+ +KNT
Sbjct: 1011 GMSCCCKDPNMHAMT*NDR*RDISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNT 832
Query: 78 PTTLKEMPPGLPAEDVAESPLHAMQI 1
P++ +M P L +E+V + P +QI
Sbjct: 831 PSSC*QMTPWLASENVPKMPFTIVQI 754
Score = 69.7 bits (146), Expect(2) = 2e-078
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1 / +1
Query: 445 ENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP 558
EN +W DS WR LKV+WDEPS++ RP++VSPW++EP
Sbjct: 1201 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEP 1314
Score = 39.5 bits (80), Expect(3) = 1e-036
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = -2 / -3
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFS 444
GS QGETLSGR EGSS TF L ES + FS
Sbjct: 1313 GSSSQGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS 1200
Score = 25.8 bits (50), Expect(3) = 1e-036
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 440 PTIVPVNLCSGA 405
PTIVP+NL SGA
Sbjct: 1193 PTIVPLNLFSGA 1158
>gb|U83245.1|ATU83245 Arabidopsis thaliana auxin response factor 1 (ARF1) mRNA, complete
cds
Length = 2332
Score = 246 bits (532), Expect(2) = 2e-078
Identities = 101/149 (67%), Positives = 118/149 (79%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EW FRHIFRGQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MR
Sbjct: 616 DLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMR 795
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MH+GVLATA HAI T ++F+V+YKPRTS SEFI+ ++Y+E+
Sbjct: 796 QQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQK 975
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCE 447
S+GMRF+MRFEGEEAPE+RF+GTIVG +
Sbjct: 976 LSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 1062
Score = 129 bits (276), Expect(3) = 1e-036
Identities = 63/106 (59%), Positives = 77/106 (72%)
Frame = -2 / -3
Query: 320 INSEGLVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPF 141
INS+ LVLGL* T + V++A AVARTP CML L++T++G L CL+ RLTPTRSS F
Sbjct: 935 INSDLLVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSF 756
Query: 140 SPLRKMKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
SPL+ MKASPATS ELTKTL P+ + LG PRKM HS+ C+
Sbjct: 755 SPLKNMKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCK 618
Score = 104 bits (223), Expect = 4e-021
Identities = 53/146 (36%), Positives = 80/146 (54%)
Frame = -1 / -2
Query: 438 NYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEHGLCVN 259
NYC ++P LG FP + H E+H R ++ I I ++KL* P LV D + C N
Sbjct: 1053 NYCATEPFLGSFFPLESHLETHAYRQLLGLSFEIPIDAHNKL*PTCPWLVEDRKDCSCCN 874
Query: 258 RVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPFGTDKNT 79
+ C K+P MHA+ +R R I L H PNT S+ + + E E ++S+ +KNT
Sbjct: 873 GMSCCCKDPNMHAMT*NDR*RDISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNT 694
Query: 78 PTTLKEMPPGLPAEDVAESPLHAMQI 1
P++ +M P L +E+V + P +QI
Sbjct: 693 PSSC*QMTPWLASENVPKMPFTIVQI 616
Score = 69.7 bits (146), Expect(2) = 2e-078
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1 / +1
Query: 445 ENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP 558
EN +W DS WR LKV+WDEPS++ RP++VSPW++EP
Sbjct: 1063 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEP 1176
Score = 39.5 bits (80), Expect(3) = 1e-036
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = -2 / -3
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFS 444
GS QGETLSGR EGSS TF L ES + FS
Sbjct: 1175 GSSSQGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS 1062
Score = 25.8 bits (50), Expect(3) = 1e-036
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 440 PTIVPVNLCSGA 405
PTIVP+NL SGA
Sbjct: 1055 PTIVPLNLFSGA 1020
>ref|NM_001036131.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription
factor AT1G59750 (ARF1) transcript variant AT1G59750.3
mRNA, complete cds
Length = 2290
Score = 246 bits (532), Expect(2) = 2e-078
Identities = 101/149 (67%), Positives = 118/149 (79%)
Frame = +1 / +2
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EW FRHIFRGQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MR
Sbjct: 554 DLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMR 733
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MH+GVLATA HAI T ++F+V+YKPRTS SEFI+ ++Y+E+
Sbjct: 734 QQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQK 913
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCE 447
S+GMRF+MRFEGEEAPE+RF+GTIVG +
Sbjct: 914 LSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 1000
Score = 129 bits (276), Expect(3) = 1e-036
Identities = 63/106 (59%), Positives = 77/106 (72%)
Frame = -2 / -2
Query: 320 INSEGLVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPF 141
INS+ LVLGL* T + V++A AVARTP CML L++T++G L CL+ RLTPTRSS F
Sbjct: 873 INSDLLVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSF 694
Query: 140 SPLRKMKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
SPL+ MKASPATS ELTKTL P+ + LG PRKM HS+ C+
Sbjct: 693 SPLKNMKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCK 556
Score = 104 bits (223), Expect = 4e-021
Identities = 53/146 (36%), Positives = 80/146 (54%)
Frame = -1 / -1
Query: 438 NYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEHGLCVN 259
NYC ++P LG FP + H E+H R ++ I I ++KL* P LV D + C N
Sbjct: 991 NYCATEPFLGSFFPLESHLETHAYRQLLGLSFEIPIDAHNKL*PTCPWLVEDRKDCSCCN 812
Query: 258 RVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPFGTDKNT 79
+ C K+P MHA+ +R R I L H PNT S+ + + E E ++S+ +KNT
Sbjct: 811 GMSCCCKDPNMHAMT*NDR*RDISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNT 632
Query: 78 PTTLKEMPPGLPAEDVAESPLHAMQI 1
P++ +M P L +E+V + P +QI
Sbjct: 631 PSSC*QMTPWLASENVPKMPFTIVQI 554
Score = 69.7 bits (146), Expect(2) = 2e-078
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1 / +2
Query: 445 ENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP 558
EN +W DS WR LKV+WDEPS++ RP++VSPW++EP
Sbjct: 1001 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEP 1114
Score = 39.5 bits (80), Expect(3) = 1e-036
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = -2 / -2
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFS 444
GS QGETLSGR EGSS TF L ES + FS
Sbjct: 1113 GSSSQGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS 1000
Score = 25.8 bits (50), Expect(3) = 1e-036
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 440 PTIVPVNLCSGA 405
PTIVP+NL SGA
Sbjct: 993 PTIVPLNLFSGA 958
>gb|BT002748.1| Arabidopsis thaliana clone C105458 auxin response factor 1
(At1g59750) mRNA, complete cds
Length = 2029
Score = 246 bits (532), Expect(2) = 2e-078
Identities = 101/149 (67%), Positives = 118/149 (79%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EW FRHIFRGQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MR
Sbjct: 502 DLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMR 681
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MH+GVLATA HAI T ++F+V+YKPRTS SEFI+ ++Y+E+
Sbjct: 682 QQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQK 861
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCE 447
S+GMRF+MRFEGEEAPE+RF+GTIVG +
Sbjct: 862 LSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 948
Score = 129 bits (276), Expect(3) = 1e-036
Identities = 63/106 (59%), Positives = 77/106 (72%)
Frame = -2 / -3
Query: 320 INSEGLVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPF 141
INS+ LVLGL* T + V++A AVARTP CML L++T++G L CL+ RLTPTRSS F
Sbjct: 821 INSDLLVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSF 642
Query: 140 SPLRKMKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
SPL+ MKASPATS ELTKTL P+ + LG PRKM HS+ C+
Sbjct: 641 SPLKNMKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCK 504
Score = 104 bits (223), Expect = 4e-021
Identities = 53/146 (36%), Positives = 80/146 (54%)
Frame = -1 / -2
Query: 438 NYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEHGLCVN 259
NYC ++P LG FP + H E+H R ++ I I ++KL* P LV D + C N
Sbjct: 939 NYCATEPFLGSFFPLESHLETHAYRQLLGLSFEIPIDAHNKL*PTCPWLVEDRKDCSCCN 760
Query: 258 RVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPFGTDKNT 79
+ C K+P MHA+ +R R I L H PNT S+ + + E E ++S+ +KNT
Sbjct: 759 GMSCCCKDPNMHAMT*NDR*RDISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNT 580
Query: 78 PTTLKEMPPGLPAEDVAESPLHAMQI 1
P++ +M P L +E+V + P +QI
Sbjct: 579 PSSC*QMTPWLASENVPKMPFTIVQI 502
Score = 69.7 bits (146), Expect(2) = 2e-078
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1 / +1
Query: 445 ENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP 558
EN +W DS WR LKV+WDEPS++ RP++VSPW++EP
Sbjct: 949 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEP 1062
Score = 39.5 bits (80), Expect(3) = 1e-036
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = -2 / -3
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFS 444
GS QGETLSGR EGSS TF L ES + FS
Sbjct: 1061 GSSSQGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS 948
Score = 25.8 bits (50), Expect(3) = 1e-036
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 440 PTIVPVNLCSGA 405
PTIVP+NL SGA
Sbjct: 941 PTIVPLNLFSGA 906
>emb|AX507306.1| Sequence 2001 from Patent WO0216655
Length = 1998
Score = 246 bits (532), Expect(2) = 2e-078
Identities = 101/149 (67%), Positives = 118/149 (79%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EW FRHIFRGQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MR
Sbjct: 502 DLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMR 681
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MH+GVLATA HAI T ++F+V+YKPRTS SEFI+ ++Y+E+
Sbjct: 682 QQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQK 861
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCE 447
S+GMRF+MRFEGEEAPE+RF+GTIVG +
Sbjct: 862 LSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 948
Score = 129 bits (276), Expect(3) = 1e-036
Identities = 63/106 (59%), Positives = 77/106 (72%)
Frame = -2 / -2
Query: 320 INSEGLVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPF 141
INS+ LVLGL* T + V++A AVARTP CML L++T++G L CL+ RLTPTRSS F
Sbjct: 821 INSDLLVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSF 642
Query: 140 SPLRKMKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
SPL+ MKASPATS ELTKTL P+ + LG PRKM HS+ C+
Sbjct: 641 SPLKNMKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCK 504
Score = 104 bits (223), Expect = 4e-021
Identities = 53/146 (36%), Positives = 80/146 (54%)
Frame = -1 / -1
Query: 438 NYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEHGLCVN 259
NYC ++P LG FP + H E+H R ++ I I ++KL* P LV D + C N
Sbjct: 939 NYCATEPFLGSFFPLESHLETHAYRQLLGLSFEIPIDAHNKL*PTCPWLVEDRKDCSCCN 760
Query: 258 RVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPFGTDKNT 79
+ C K+P MHA+ +R R I L H PNT S+ + + E E ++S+ +KNT
Sbjct: 759 GMSCCCKDPNMHAMT*NDR*RDISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNT 580
Query: 78 PTTLKEMPPGLPAEDVAESPLHAMQI 1
P++ +M P L +E+V + P +QI
Sbjct: 579 PSSC*QMTPWLASENVPKMPFTIVQI 502
Score = 69.7 bits (146), Expect(2) = 2e-078
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1 / +1
Query: 445 ENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP 558
EN +W DS WR LKV+WDEPS++ RP++VSPW++EP
Sbjct: 949 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEP 1062
Score = 39.5 bits (80), Expect(3) = 1e-036
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = -2 / -2
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFS 444
GS QGETLSGR EGSS TF L ES + FS
Sbjct: 1061 GSSSQGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS 948
Score = 25.8 bits (50), Expect(3) = 1e-036
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 440 PTIVPVNLCSGA 405
PTIVP+NL SGA
Sbjct: 941 PTIVPLNLFSGA 906
>gb|BU635530.1|BU635530 024G07 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 725
Score = 246 bits (532), Expect(2) = 2e-078
Identities = 101/149 (67%), Positives = 118/149 (79%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EW FRHIFRGQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MR
Sbjct: 130 DLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMR 309
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
Q MH+GVLATA HAI T ++F+V+YKPRTS SEFI+ ++Y+E+
Sbjct: 310 QQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQK 489
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVGCE 447
S+GMRF+MRFEGEEAPE+RF+GTIVG +
Sbjct: 490 LSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 576
Score = 129 bits (276), Expect(3) = 6e-037
Identities = 63/106 (59%), Positives = 77/106 (72%)
Frame = -2 / -1
Query: 320 INSEGLVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPF 141
INS+ LVLGL* T + V++A AVARTP CML L++T++G L CL+ RLTPTRSS F
Sbjct: 449 INSDLLVLGL*KTEKIVPVVMA*AAVARTPICML*LEMTDDGILVCCLMCRLTPTRSSSF 270
Query: 140 SPLRKMKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
SPL+ MKASPATS ELTKTL P+ + LG PRKM HS+ C+
Sbjct: 269 SPLKNMKASPATSFFELTKTLHPVVSK*RLGWPRKMCLKCHSLLCK 132
Score = 104 bits (223), Expect = 4e-021
Identities = 53/146 (36%), Positives = 80/146 (54%)
Frame = -1 / -3
Query: 438 NYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEHGLCVN 259
NYC ++P LG FP + H E+H R ++ I I ++KL* P LV D + C N
Sbjct: 567 NYCATEPFLGSFFPLESHLETHAYRQLLGLSFEIPIDAHNKL*PTCPWLVEDRKDCSCCN 388
Query: 258 RVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPFGTDKNT 79
+ C K+P MHA+ +R R I L H PNT S+ + + E E ++S+ +KNT
Sbjct: 387 GMSCCCKDPNMHAMT*NDR*RDISLLSHVPPNTYSELFILTP*EYESITSH*FLRANKNT 208
Query: 78 PTTLKEMPPGLPAEDVAESPLHAMQI 1
P++ +M P L +E+V + P +QI
Sbjct: 207 PSSC*QMTPWLASENVPKMPFTIVQI 130
Score = 69.7 bits (146), Expect(2) = 2e-078
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1 / +1
Query: 445 ENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP 558
EN +W DS WR LKV+WDEPS++ RP++VSPW++EP
Sbjct: 577 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEP 690
Score = 40.4 bits (82), Expect(3) = 6e-037
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -1
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFS 444
GS QGETLSGR EGSS TF+ L ES + FS
Sbjct: 689 GSSSQGETLSGRNTDEGSSH*TFRDLHSESCQTEDLFS 576
Score = 25.8 bits (50), Expect(3) = 6e-037
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -1
Query: 440 PTIVPVNLCSGA 405
PTIVP+NL SGA
Sbjct: 569 PTIVPLNLFSGA 534
>ref|NM_001036629.1| Arabidopsis thaliana ARF9 (AUXIN RESPONSE FACTOR 9) AT4G23980 (ARF9)
transcript variant AT4G23980.2 mRNA, complete cds
Length = 2835
Score = 176 bits (379), Expect(2) = 3e-078
Identities = 71/102 (69%), Positives = 79/102 (77%)
Frame = +1 / +2
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
D+HG +W+F+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGELRVGVRRA
Sbjct: 872 DVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANL 1051
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
Q MHLGVLATA HA TK+MF VYYKPRTS
Sbjct: 1052 QQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPRTS 1177
Score = 139 bits (298), Expect(2) = 3e-078
Identities = 47/83 (56%), Positives = 70/83 (84%)
Frame = +1 / +2
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FII ++Y+E++ N +S+GMRF+MRFEGE++PE+R++GT++G ++ P W DS WR L
Sbjct: 1175 SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVKDCSPHWKDSKWRCL 1354
Query: 490 KVRWDEPSTIPRPDKVSPWKIEP 558
+V WDEP++I RP+KVSPW+IEP
Sbjct: 1355 EVHWDEPASISRPNKVSPWEIEP 1423
Score = 126 bits (271), Expect(2) = 3e-034
Identities = 60/100 (60%), Positives = 72/100 (72%)
Frame = -2 / -1
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
LVLGL* T+N+ FV +A AVA TPRC+L LDIT+EG L +ARLTPTR+SPFSPLR
Sbjct: 1176 LVLGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSPLRN 997
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPC 6
K SPAT+L ++TK L P+ RCL G P K+ N H PC
Sbjct: 996 TKVSPATNLFDVTKVLHPVVNRCLRGWPLKICLNFH**PC 877
Score = 41.4 bits (84), Expect(2) = 3e-034
Identities = 24/50 (48%), Positives = 26/50 (52%)
Frame = -2 / -1
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
GSI GETL G I GSSQ T K+ ES G + P VP L SG
Sbjct: 1422 GSISHGETLLGLEIDAGSSQ*TSKHRHFESFQ*GEQSFTPITVPEYLLSG 1273
>ref|NM_118530.3| Arabidopsis thaliana ARF9 (AUXIN RESPONSE FACTOR 9); transcription
factor AT4G23980 (ARF9) transcript variant AT4G23980.1
mRNA, complete cds
Length = 2479
Score = 176 bits (379), Expect(2) = 3e-078
Identities = 71/102 (69%), Positives = 79/102 (77%)
Frame = +1 / +2
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
D+HG +W+F+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGELRVGVRRA
Sbjct: 773 DVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANL 952
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
Q MHLGVLATA HA TK+MF VYYKPRTS
Sbjct: 953 QQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPRTS 1078
Score = 139 bits (298), Expect(2) = 3e-078
Identities = 47/83 (56%), Positives = 70/83 (84%)
Frame = +1 / +2
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FII ++Y+E++ N +S+GMRF+MRFEGE++PE+R++GT++G ++ P W DS WR L
Sbjct: 1076 SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVKDCSPHWKDSKWRCL 1255
Query: 490 KVRWDEPSTIPRPDKVSPWKIEP 558
+V WDEP++I RP+KVSPW+IEP
Sbjct: 1256 EVHWDEPASISRPNKVSPWEIEP 1324
Score = 126 bits (271), Expect(2) = 3e-034
Identities = 60/100 (60%), Positives = 72/100 (72%)
Frame = -2 / -2
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
LVLGL* T+N+ FV +A AVA TPRC+L LDIT+EG L +ARLTPTR+SPFSPLR
Sbjct: 1077 LVLGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSPLRN 898
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPC 6
K SPAT+L ++TK L P+ RCL G P K+ N H PC
Sbjct: 897 TKVSPATNLFDVTKVLHPVVNRCLRGWPLKICLNFH**PC 778
Score = 41.4 bits (84), Expect(2) = 3e-034
Identities = 24/50 (48%), Positives = 26/50 (52%)
Frame = -2 / -2
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
GSI GETL G I GSSQ T K+ ES G + P VP L SG
Sbjct: 1323 GSISHGETLLGLEIDAGSSQ*TSKHRHFESFQ*GEQSFTPITVPEYLLSG 1174
>emb|BX828437.1|CNS0A2BW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH8ZD05 of Hormone Treated Callus of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 2473
Score = 176 bits (379), Expect(2) = 3e-078
Identities = 71/102 (69%), Positives = 79/102 (77%)
Frame = +1 / +2
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
D+HG +W+F+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGELRVGVRRA
Sbjct: 773 DVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANL 952
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
Q MHLGVLATA HA TK+MF VYYKPRTS
Sbjct: 953 QQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPRTS 1078
Score = 139 bits (298), Expect(2) = 3e-078
Identities = 47/83 (56%), Positives = 70/83 (84%)
Frame = +1 / +2
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FII ++Y+E++ N +S+GMRF+MRFEGE++PE+R++GT++G ++ P W DS WR L
Sbjct: 1076 SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVKDCSPHWKDSKWRCL 1255
Query: 490 KVRWDEPSTIPRPDKVSPWKIEP 558
+V WDEP++I RP+KVSPW+IEP
Sbjct: 1256 EVHWDEPASISRPNKVSPWEIEP 1324
Score = 126 bits (271), Expect(2) = 3e-034
Identities = 60/100 (60%), Positives = 72/100 (72%)
Frame = -2 / -2
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
LVLGL* T+N+ FV +A AVA TPRC+L LDIT+EG L +ARLTPTR+SPFSPLR
Sbjct: 1077 LVLGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSPLRN 898
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPC 6
K SPAT+L ++TK L P+ RCL G P K+ N H PC
Sbjct: 897 TKVSPATNLFDVTKVLHPVVNRCLRGWPLKICLNFH**PC 778
Score = 41.4 bits (84), Expect(2) = 3e-034
Identities = 24/50 (48%), Positives = 26/50 (52%)
Frame = -2 / -2
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
GSI GETL G I GSSQ T K+ ES G + P VP L SG
Sbjct: 1323 GSISHGETLLGLEIDAGSSQ*TSKHRHFESFQ*GEQSFTPITVPEYLLSG 1174
>gb|AF082176.1|AF082176 Arabidopsis thaliana auxin response factor 9 (ARF9) mRNA, complete
cds
Length = 2292
Score = 176 bits (379), Expect(2) = 3e-078
Identities = 71/102 (69%), Positives = 79/102 (77%)
Frame = +1 / +3
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
D+HG +W+F+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGELRVGVRRA
Sbjct: 765 DVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANL 944
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
Q MHLGVLATA HA TK+MF VYYKPRTS
Sbjct: 945 QQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPRTS 1070
Score = 139 bits (298), Expect(2) = 3e-078
Identities = 47/83 (56%), Positives = 70/83 (84%)
Frame = +1 / +3
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FII ++Y+E++ N +S+GMRF+MRFEGE++PE+R++GT++G ++ P W DS WR L
Sbjct: 1068 SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVKDCSPHWKDSKWRCL 1247
Query: 490 KVRWDEPSTIPRPDKVSPWKIEP 558
+V WDEP++I RP+KVSPW+IEP
Sbjct: 1248 EVHWDEPASISRPNKVSPWEIEP 1316
Score = 126 bits (271), Expect(2) = 3e-034
Identities = 60/100 (60%), Positives = 72/100 (72%)
Frame = -2 / -3
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
LVLGL* T+N+ FV +A AVA TPRC+L LDIT+EG L +ARLTPTR+SPFSPLR
Sbjct: 1069 LVLGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSPLRN 890
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPC 6
K SPAT+L ++TK L P+ RCL G P K+ N H PC
Sbjct: 889 TKVSPATNLFDVTKVLHPVVNRCLRGWPLKICLNFH**PC 770
Score = 41.4 bits (84), Expect(2) = 3e-034
Identities = 24/50 (48%), Positives = 26/50 (52%)
Frame = -2 / -3
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
GSI GETL G I GSSQ T K+ ES G + P VP L SG
Sbjct: 1315 GSISHGETLLGLEIDAGSSQ*TSKHRHFESFQ*GEQSFTPITVPEYLLSG 1166
>gb|AF344312.1| Arabidopsis thaliana clone C00029 (e) auxin response factor 9
(At4g23980) mRNA, complete cds
Length = 1917
Score = 176 bits (379), Expect(2) = 3e-078
Identities = 71/102 (69%), Positives = 79/102 (77%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
D+HG +W+F+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGELRVGVRRA
Sbjct: 478 DVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANL 657
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTS 306
Q MHLGVLATA HA TK+MF VYYKPRTS
Sbjct: 658 QQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPRTS 783
Score = 139 bits (298), Expect(2) = 3e-078
Identities = 47/83 (56%), Positives = 70/83 (84%)
Frame = +1 / +1
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYL 489
S+FII ++Y+E++ N +S+GMRF+MRFEGE++PE+R++GT++G ++ P W DS WR L
Sbjct: 781 SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVKDCSPHWKDSKWRCL 960
Query: 490 KVRWDEPSTIPRPDKVSPWKIEP 558
+V WDEP++I RP+KVSPW+IEP
Sbjct: 961 EVHWDEPASISRPNKVSPWEIEP 1029
Score = 126 bits (271), Expect(2) = 3e-034
Identities = 60/100 (60%), Positives = 72/100 (72%)
Frame = -2 / -2
Query: 305 LVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRK 126
LVLGL* T+N+ FV +A AVA TPRC+L LDIT+EG L +ARLTPTR+SPFSPLR
Sbjct: 782 LVLGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSPLRN 603
Query: 125 MKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPC 6
K SPAT+L ++TK L P+ RCL G P K+ N H PC
Sbjct: 602 TKVSPATNLFDVTKVLHPVVNRCLRGWPLKICLNFH**PC 483
Score = 41.4 bits (84), Expect(2) = 3e-034
Identities = 24/50 (48%), Positives = 26/50 (52%)
Frame = -2 / -2
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSG 408
GSI GETL G I GSSQ T K+ ES G + P VP L SG
Sbjct: 1028 GSISHGETLLGLEIDAGSSQ*TSKHRHFESFQ*GEQSFTPITVPEYLLSG 879
>emb|BX815613.1|CNS0ADXB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS78ZB02 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2327
Score = 136 bits (292), Expect(4) = 1e-066
Identities = 56/78 (71%), Positives = 59/78 (75%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLH EW FRHIFRGQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MR
Sbjct: 616 DLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMR 795
Query: 181 QLXXXXXXXXXXXXMHLG 234
Q MH+G
Sbjct: 796 QQTNIPSSVISSHSMHIG 849
Score = 104 bits (222), Expect(4) = 5e-035
Identities = 46/77 (59%), Positives = 56/77 (72%)
Frame = -2 / -1
Query: 233 PRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSLLELTKTLQPL*RRCL 54
P CML L++T++G L CL+ RLTPTRSS FSPL+ MKASPATS ELTKTL P+ +
Sbjct: 848 PICML*LEMTDDGILVCCLMCRLTPTRSSSFSPLKNMKASPATSFFELTKTLHPVVSK*R 669
Query: 53 LGCPRKMWRNRHSMPCR 3
LG PRKM HS+ C+
Sbjct: 668 LGWPRKMCLKCHSLLCK 618
Score = 83.5 bits (176), Expect(4) = 1e-066
Identities = 32/52 (61%), Positives = 43/52 (82%)
Frame = +1 / +1
Query: 292 KPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCE 447
+PRTS SEFI+ ++Y+E+ S+GMRF+MRFEGEEAPE+RF+GTIVG +
Sbjct: 904 QPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 1059
Score = 69.7 bits (146), Expect(4) = 1e-066
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1 / +1
Query: 445 ENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP 558
EN +W DS WR LKV+WDEPS++ RP++VSPW++EP
Sbjct: 1060 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEP 1173
Score = 40.0 bits (81), Expect(4) = 5e-035
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1 / -3
Query: 438 NYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRL 292
NYC ++P LG FP + H E+H R ++ I I ++KL* P L
Sbjct: 1050 NYCATEPFLGSFFPLESHLETHAYRQLLGLSFEIPIDAHNKL*PTCPWL 904
Score = 39.5 bits (80), Expect(4) = 5e-035
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = -2 / -1
Query: 557 GSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFS 444
GS QGETLSGR EGSS TF L ES + FS
Sbjct: 1172 GSSSQGETLSGRNTDEGSSH*TFSDLHSESCQTEDLFS 1059
Score = 24.4 bits (47), Expect(4) = 1e-066
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1 / +2
Query: 229 LGVLATAWHAINTKSMFTVYYKPRTSPS 312
LGVLATA HAI+ Y + + S
Sbjct: 845 LGVLATAAHAIHRNIFSVFYSQGQVGQS 928
Score = 22.1 bits (42), Expect(4) = 5e-035
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1 / -2
Query: 294 LVVDSEHGLCVNRVPCSRKNPE 229
L V+ + VN + C RK+P+
Sbjct: 910 LAVEDRKDVPVNGMSCCRKDPQ 845
>emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome 3, BAC clone F21F14
Length = 142001
Score = 83.9 bits (177), Expect(6) = 2e-066
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = +1 / +2
Query: 115 DAFIFLRGENGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYK 294
+AF+F RGENG+LRVGVRR R MHLGVLATA HA+ T ++F V+YK
Sbjct: 52229 NAFVFFRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVFYK 52408
Query: 295 PR 300
PR
Sbjct: 52409 PR 52414
Score = 69.3 bits (145), Expect(6) = 2e-066
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1 / +1
Query: 43 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 135
GQPRRHLL +GWS FVSSKRLVAGDAF+FLR
Sbjct: 52078 GQPRRHLLTTGWSTFVSSKRLVAGDAFVFLR 52170
Score = 60.6 bits (126), Expect(6) = 2e-066
Identities = 21/36 (58%), Positives = 32/36 (88%)
Frame = +1 / +2
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQ 417
S+FI+ ++YME++K+ +S+G RFRMRFEGEE+PE+
Sbjct: 52508 SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPER 52615
Score = 52.3 bits (108), Expect(6) = 2e-066
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +1 / +3
Query: 493 VRWDEPSTIPRPDKVSPWKIEP 558
V+WDEP+T+ RPDKVSPW+IEP
Sbjct: 52851 VQWDEPTTVQRPDKVSPWEIEP 52916
Score = 41.8 bits (85), Expect(6) = 2e-066
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +1 / +2
Query: 418 RFTGTIVGCENLDPLWPDSSWRYLKVRWDEP 510
RFTGTIVG +L WP S WR L+V+ P
Sbjct: 52688 RFTGTIVGSGDLSSQWPASKWRSLQVQLTIP 52780
Score = 40.4 bits (82), Expect(6) = 2e-066
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRG 45
DLHG EWRF+HIFRG
Sbjct: 51949 DLHGFEWRFKHIFRG 51993
>emb|AL132959.1|ATF15G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F15G16
Length = 104868
Score = 83.9 bits (177), Expect(6) = 2e-066
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = +1 / +3
Query: 115 DAFIFLRGENGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYK 294
+AF+F RGENG+LRVGVRR R MHLGVLATA HA+ T ++F V+YK
Sbjct: 100917 NAFVFFRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVFYK 101096
Query: 295 PR 300
PR
Sbjct: 101097 PR 101102
Score = 69.3 bits (145), Expect(6) = 2e-066
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1 / +2
Query: 43 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 135
GQPRRHLL +GWS FVSSKRLVAGDAF+FLR
Sbjct: 100766 GQPRRHLLTTGWSTFVSSKRLVAGDAFVFLR 100858
Score = 60.6 bits (126), Expect(6) = 2e-066
Identities = 21/36 (58%), Positives = 32/36 (88%)
Frame = +1 / +3
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQ 417
S+FI+ ++YME++K+ +S+G RFRMRFEGEE+PE+
Sbjct: 101196 SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPER 101303
Score = 52.3 bits (108), Expect(6) = 2e-066
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +1 / +1
Query: 493 VRWDEPSTIPRPDKVSPWKIEP 558
V+WDEP+T+ RPDKVSPW+IEP
Sbjct: 101539 VQWDEPTTVQRPDKVSPWEIEP 101604
Score = 41.8 bits (85), Expect(6) = 2e-066
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +1 / +3
Query: 418 RFTGTIVGCENLDPLWPDSSWRYLKVRWDEP 510
RFTGTIVG +L WP S WR L+V+ P
Sbjct: 101376 RFTGTIVGSGDLSSQWPASKWRSLQVQLTIP 101468
Score = 40.4 bits (82), Expect(6) = 2e-066
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1 / +2
Query: 1 DLHGMEWRFRHIFRG 45
DLHG EWRF+HIFRG
Sbjct: 100637 DLHGFEWRFKHIFRG 100681
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 106 bits (226), Expect(3) = 3e-022
Identities = 39/60 (65%), Positives = 50/60 (83%)
Frame = +1 / -2
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
D+HG W+FRHI+RG PRRHLL +GWS FV+ K+LVAGD+ +F+R ENG+L VG+RRA R
Sbjct: 10617852 DVHGDVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKR 10617673
Score = 84.8 bits (179), Expect(6) = 5e-064
Identities = 38/59 (64%), Positives = 39/59 (66%)
Frame = +1 / +2
Query: 124 IFLRGENGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPR 300
IF RGENGELRVGVRRA Q MHLGVLATA HA TK+MF VYYKPR
Sbjct: 8365658 IFSRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPR 8365834
Score = 77.5 bits (163), Expect(3) = 6e-023
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = -2 / -2
Query: 299 LGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKM 123
LGL* T+N+ FV +A AVA TPRC+L LDIT+EG L +ARLTPTR+SPFSPL +
Sbjct: 8365833 LGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSPLENI 8365657
Score = 66.1 bits (138), Expect(6) = 5e-064
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1 / +3
Query: 43 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 135
GQPRRHLL +GWS FV+SKRLVAGD F+FLR
Sbjct: 8365488 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR 8365580
Score = 62.0 bits (129), Expect(6) = 5e-064
Identities = 21/37 (56%), Positives = 33/37 (89%)
Frame = +1 / +3
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 420
S+FII ++Y+E++ N +S+GMRF+MRFEGE++PE+R
Sbjct: 8365920 SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR 8366030
Score = 48.7 bits (100), Expect(6) = 5e-064
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +1 / +3
Query: 478 WRYLKVRWDEPSTIPRPDKVSPWKIEP 558
+ ++ V WDEP++I RP+KVSPW+IEP
Sbjct: 8366250 YMFV*VHWDEPASISRPNKVSPWEIEP 8366330
Score = 42.7 bits (87), Expect(6) = 5e-064
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +1 / +1
Query: 415 QRFTGTIVGCENLDPLWPDSSWRYLKVRW 501
QR++GT++G ++ P W DS WR L+V++
Sbjct: 8366104 QRYSGTVIGVKDCSPHWKDSKWRCLEVKF 8366190
Score = 42.3 bits (86), Expect(3) = 6e-023
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -2 / -1
Query: 134 LRKMKASPATSLLELTKTLQPL*RRCLLGCP 42
LR K SPAT+L ++TK L P+ RCL G P
Sbjct: 8365579 LRNTKVSPATNLFDVTKVLHPVVNRCLRGWP 8365487
Score = 38.2 bits (77), Expect(3) = 3e-022
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1 / -2
Query: 277 FTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEA 408
F V Y PR S SEF + +++ + GMRF+M FE E++
Sbjct: 10617477 FEVVYYPRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDS 10617346
Score = 35.9 bits (72), Expect(6) = 5e-064
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1 / +2
Query: 1 DLHGMEWRFRHIFRG 45
D+HG +W+F+HIFRG
Sbjct: 8365361 DVHGYQWKFKHIFRG 8365405
Score = 34.0 bits (68), Expect(3) = 3e-022
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1 / -2
Query: 490 KVRWDEPSTIPRPDKVSPWKIEPASSPPVNPLPLSRGKRPRQNAP 624
+V WDEP + +V+PW +E S+ PL R + P
Sbjct: 10617183 QVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLP 10617049
Score = 27.6 bits (54), Expect(3) = 6e-023
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1 / -3
Query: 420 PLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL 313
P G+ K H +SHP R ++ + I + ND+L
Sbjct: 8366030 PSFRGILSLKTHLKSHPYRELIAHGF*IFVQANDEL 8365923
>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60
Length = 196677
Score = 84.8 bits (179), Expect(6) = 5e-064
Identities = 38/59 (64%), Positives = 39/59 (66%)
Frame = +1 / +2
Query: 124 IFLRGENGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPR 300
IF RGENGELRVGVRRA Q MHLGVLATA HA TK+MF VYYKPR
Sbjct: 112271 IFSRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPR 112447
Score = 77.5 bits (163), Expect(3) = 7e-023
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = -2 / -1
Query: 299 LGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKM 123
LGL* T+N+ FV +A AVA TPRC+L LDIT+EG L +ARLTPTR+SPFSPL +
Sbjct: 112446 LGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSPLENI 112270
Score = 66.1 bits (138), Expect(6) = 5e-064
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1 / +3
Query: 43 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 135
GQPRRHLL +GWS FV+SKRLVAGD F+FLR
Sbjct: 112101 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR 112193
Score = 62.0 bits (129), Expect(6) = 5e-064
Identities = 21/37 (56%), Positives = 33/37 (89%)
Frame = +1 / +3
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 420
S+FII ++Y+E++ N +S+GMRF+MRFEGE++PE+R
Sbjct: 112533 SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR 112643
Score = 48.7 bits (100), Expect(6) = 5e-064
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +1 / +3
Query: 478 WRYLKVRWDEPSTIPRPDKVSPWKIEP 558
+ ++ V WDEP++I RP+KVSPW+IEP
Sbjct: 112863 YMFV*VHWDEPASISRPNKVSPWEIEP 112943
Score = 42.7 bits (87), Expect(6) = 5e-064
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +1 / +1
Query: 415 QRFTGTIVGCENLDPLWPDSSWRYLKVRW 501
QR++GT++G ++ P W DS WR L+V++
Sbjct: 112717 QRYSGTVIGVKDCSPHWKDSKWRCLEVKF 112803
Score = 42.3 bits (86), Expect(3) = 7e-023
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -2 / -3
Query: 134 LRKMKASPATSLLELTKTLQPL*RRCLLGCP 42
LR K SPAT+L ++TK L P+ RCL G P
Sbjct: 112192 LRNTKVSPATNLFDVTKVLHPVVNRCLRGWP 112100
Score = 35.9 bits (72), Expect(6) = 5e-064
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1 / +2
Query: 1 DLHGMEWRFRHIFRG 45
D+HG +W+F+HIFRG
Sbjct: 111974 DVHGYQWKFKHIFRG 112018
Score = 27.6 bits (54), Expect(3) = 7e-023
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1 / -2
Query: 420 PLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL 313
P G+ K H +SHP R ++ + I + ND+L
Sbjct: 112643 PSFRGILSLKTHLKSHPYRELIAHGF*IFVQANDEL 112536
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete
sequence
Length = 116156
Score = 84.8 bits (179), Expect(6) = 5e-064
Identities = 38/59 (64%), Positives = 39/59 (66%)
Frame = +1 / -1
Query: 124 IFLRGENGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPR 300
IF RGENGELRVGVRRA Q MHLGVLATA HA TK+MF VYYKPR
Sbjct: 100340 IFSRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPR 100164
Score = 77.5 bits (163), Expect(3) = 7e-023
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = -2 / +1
Query: 299 LGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKM 123
LGL* T+N+ FV +A AVA TPRC+L LDIT+EG L +ARLTPTR+SPFSPL +
Sbjct: 100165 LGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSPLENI 100341
Score = 66.1 bits (138), Expect(6) = 5e-064
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1 / -2
Query: 43 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 135
GQPRRHLL +GWS FV+SKRLVAGD F+FLR
Sbjct: 100510 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR 100418
Score = 62.0 bits (129), Expect(6) = 5e-064
Identities = 21/37 (56%), Positives = 33/37 (89%)
Frame = +1 / -2
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 420
S+FII ++Y+E++ N +S+GMRF+MRFEGE++PE+R
Sbjct: 100078 SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR 99968
Score = 48.7 bits (100), Expect(6) = 5e-064
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +1 / -2
Query: 478 WRYLKVRWDEPSTIPRPDKVSPWKIEP 558
+ ++ V WDEP++I RP+KVSPW+IEP
Sbjct: 99748 YMFV*VHWDEPASISRPNKVSPWEIEP 99668
Score = 42.7 bits (87), Expect(6) = 5e-064
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +1 / -3
Query: 415 QRFTGTIVGCENLDPLWPDSSWRYLKVRW 501
QR++GT++G ++ P W DS WR L+V++
Sbjct: 99894 QRYSGTVIGVKDCSPHWKDSKWRCLEVKF 99808
Score = 42.3 bits (86), Expect(3) = 7e-023
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -2 / +3
Query: 134 LRKMKASPATSLLELTKTLQPL*RRCLLGCP 42
LR K SPAT+L ++TK L P+ RCL G P
Sbjct: 100419 LRNTKVSPATNLFDVTKVLHPVVNRCLRGWP 100511
Score = 35.9 bits (72), Expect(6) = 5e-064
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1 / -1
Query: 1 DLHGMEWRFRHIFRG 45
D+HG +W+F+HIFRG
Sbjct: 100637 DVHGYQWKFKHIFRG 100593
Score = 27.6 bits (54), Expect(3) = 7e-023
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1 / +2
Query: 420 PLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL 313
P G+ K H +SHP R ++ + I + ND+L
Sbjct: 99968 PSFRGILSLKTHLKSHPYRELIAHGF*IFVQANDEL 100075
>emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome 4, BAC clone T32A16 (ESSA project)
Length = 89826
Score = 84.8 bits (179), Expect(6) = 6e-064
Identities = 38/59 (64%), Positives = 39/59 (66%)
Frame = +1 / +1
Query: 124 IFLRGENGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPR 300
IF RGENGELRVGVRRA Q MHLGVLATA HA TK+MF VYYKPR
Sbjct: 62365 IFSRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPR 62541
Score = 77.5 bits (163), Expect(3) = 7e-023
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = -2 / -2
Query: 299 LGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKM 123
LGL* T+N+ FV +A AVA TPRC+L LDIT+EG L +ARLTPTR+SPFSPL +
Sbjct: 62540 LGL*YTMNIVFV*VAWRAVASTPRCIL*LDITDEGILLC*RLARLTPTRNSPFSPLENI 62364
Score = 66.1 bits (138), Expect(6) = 6e-064
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1 / +2
Query: 43 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 135
GQPRRHLL +GWS FV+SKRLVAGD F+FLR
Sbjct: 62195 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR 62287
Score = 62.0 bits (129), Expect(6) = 6e-064
Identities = 21/37 (56%), Positives = 33/37 (89%)
Frame = +1 / +2
Query: 310 SEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 420
S+FII ++Y+E++ N +S+GMRF+MRFEGE++PE+R
Sbjct: 62627 SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR 62737
Score = 48.7 bits (100), Expect(6) = 6e-064
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +1 / +2
Query: 478 WRYLKVRWDEPSTIPRPDKVSPWKIEP 558
+ ++ V WDEP++I RP+KVSPW+IEP
Sbjct: 62957 YMFV*VHWDEPASISRPNKVSPWEIEP 63037
Score = 42.7 bits (87), Expect(6) = 6e-064
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +1 / +3
Query: 415 QRFTGTIVGCENLDPLWPDSSWRYLKVRW 501
QR++GT++G ++ P W DS WR L+V++
Sbjct: 62811 QRYSGTVIGVKDCSPHWKDSKWRCLEVKF 62897
Score = 42.3 bits (86), Expect(3) = 7e-023
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -2 / -1
Query: 134 LRKMKASPATSLLELTKTLQPL*RRCLLGCP 42
LR K SPAT+L ++TK L P+ RCL G P
Sbjct: 62286 LRNTKVSPATNLFDVTKVLHPVVNRCLRGWP 62194
Score = 35.9 bits (72), Expect(6) = 6e-064
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRG 45
D+HG +W+F+HIFRG
Sbjct: 62068 DVHGYQWKFKHIFRG 62112
Score = 27.6 bits (54), Expect(3) = 7e-023
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1 / -3
Query: 420 PLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL 313
P G+ K H +SHP R ++ + I + ND+L
Sbjct: 62737 PSFRGILSLKTHLKSHPYRELIAHGF*IFVQANDEL 62630
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.317 0.131 0.410
Matrix: BLOSUM62
Number of Hits to DB: 2,081,537,464
Number of Sequences: 1013581
Number of extensions: 30140095
Number of successful extensions: 392588
Number of sequences better than 1.0e-020: 166
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 75835684232
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)