TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2623051.2.1
(991 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_129695.3| Arabidopsis thaliana ATRR3 (RESPONSE REGUL... 149 6e-055
ref|NM_115563.2| Arabidopsis thaliana ARR9 (RESPONSE REACTO... 150 6e-055
dbj|AB010917.1| Arabidopsis thaliana mRNA for responce reac... 149 6e-055
gb|AY090234.1| Arabidopsis thaliana AT3g57040/F24I3_120 mRN... 150 6e-055
dbj|AB010918.1| Arabidopsis thaliana mRNA for responce reac... 150 6e-055
gb|AY133571.1| Arabidopsis thaliana At3g57040/F24I3_120 mRN... 150 6e-055
gb|AY074643.1| Arabidopsis thaliana At2g41310/F13H10.14 mRN... 149 6e-055
emb|AX505944.1| Sequence 639 from Patent WO0216655 149 6e-055
ref|NM_104686.2| Arabidopsis thaliana ARR3 (RESPONSE REGULA... 127 3e-041
dbj|AB008486.1| Arabidopsis thaliana ARR3 mRNA for response... 127 3e-041
gb|AU237462.1|AU237462 AU237462 RAFL16 Arabidopsis thaliana... 127 3e-041
ref|NM_100921.2| Arabidopsis thaliana ARR4 (RESPONSE REGULA... 127 9e-041
dbj|AB010915.1| Arabidopsis thaliana mRNA for responce regu... 127 9e-041
dbj|AB008487.1| Arabidopsis thaliana ARR4 mRNA for response... 127 9e-041
gb|AF057282.1|AF057282 Arabidopsis thaliana two-component r... 127 9e-041
emb|BX817831.1|CNS0ACG5 Arabidopsis thaliana Full-length cD... 127 1e-040
emb|AX506717.1| Sequence 1412 from Patent WO0216655 127 1e-040
gb|AV822952.1|AV822952 AV822952 RAFL5 Arabidopsis thaliana ... 127 1e-040
gb|AF305722.1|AF305722 Arabidopsis thaliana ecotype Columbi... 120 1e-040
ref|NM_115496.1| Arabidopsis thaliana ARR17; transcription ... 120 1e-040
emb|BX817837.1|CNS0ACFZ Arabidopsis thaliana Full-length cD... 127 9e-040
gb|AF305721.1|AF305721 Arabidopsis thaliana ecotype Columbi... 123 9e-040
emb|AX652028.1| Sequence 924 from Patent WO03000898 123 9e-040
emb|AJ279079.1|ATH279079 Arabidopsis thaliana mRNA for puta... 123 9e-040
ref|NM_129629.1| Arabidopsis thaliana ARR16; transcription ... 123 9e-040
dbj|AB008490.1| Arabidopsis thaliana ARR7 mRNA for response... 115 8e-039
ref|NM_101763.1| Arabidopsis thaliana ARR7 (RESPONSE REGULA... 115 8e-039
gb|AF305720.1|AF305720 Arabidopsis thaliana ecotype Columbi... 117 8e-039
ref|NM_106147.1| Arabidopsis thaliana ARR15 (RESPONSE REGUL... 117 8e-039
emb|AX506021.1| Sequence 716 from Patent WO0216655 115 8e-039
emb|AX651708.1| Sequence 539 from Patent WO03000898 115 8e-039
ref|NM_114679.3| Arabidopsis thaliana ARR5 (ARABIDOPSIS RES... 119 2e-038
emb|BX824631.1|CNS0A6YD Arabidopsis thaliana Full-length cD... 119 2e-038
gb|AF057281.1|AF057281 Arabidopsis thaliana two-component r... 119 2e-038
dbj|AB010916.1| Arabidopsis thaliana mRNA for responce reac... 119 2e-038
gb|AY072390.1| Arabidopsis thaliana response reactor 2 (ATR... 119 2e-038
dbj|AB008488.1| Arabidopsis thaliana ARR5 mRNA for response... 119 2e-038
gb|AV825102.1|AV825102 AV825102 RAFL6 Arabidopsis thaliana ... 119 2e-038
gb|AY114698.1| Arabidopsis thaliana response reactor 2 (ATR... 119 2e-038
gb|AV536923.1|AV536923 AV536923 Arabidopsis thaliana liquid... 119 2e-038
emb|AX507119.1| Sequence 1814 from Patent WO0216655 119 2e-038
gb|CB255113.1|CB255113 50-E018428-019-008-C14-T7R MPIZ-ADIS... 113 4e-038
ref|NM_125686.2| Arabidopsis thaliana ARR6 (RESPONSE REGULA... 117 2e-037
dbj|AB008489.1| Arabidopsis thaliana ARR6 mRNA for response... 117 2e-037
emb|BX833185.1|CNS09YXU Arabidopsis thaliana Full-length cD... 117 2e-037
gb|BT004799.1| Arabidopsis thaliana At5g62920 gene, complet... 117 2e-037
gb|AU235762.1|AU235762 AU235762 RAFL14 Arabidopsis thaliana... 112 8e-036
emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome ... 57 2e-032
gb|AC005662.3| Arabidopsis thaliana chromosome 2 clone F13H... 59 2e-032
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 53 3e-031
gb|AC007067.4|AC007067 Genomic sequence for Arabidopsis tha... 53 4e-031
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 54 1e-030
gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11... 54 2e-030
emb|BX831785.1|CNS0A14D Arabidopsis thaliana Full-length cD... 75 7e-029
gb|Z18216.1|Z18216 ATTS0721 Grenoble-B Arabidopsis thaliana... 127 5e-028
gb|CD532704.1|CD532704 28G9 Arabidopsis Leaf Senescence Lib... 120 4e-027
gb|AA042098.1|AA042098 24200 CD4-13 Arabidopsis thaliana cD... 117 4e-025
gb|CB252927.1|CB252927 14-E010696-019-002-K03-T7R MPIZ-ADIS... 117 4e-025
emb|BX819067.1|CNS0AA8Y Arabidopsis thaliana Full-length cD... 107 6e-025
dbj|AB076907.1| Arabidopsis thaliana IRK gene for infloresc... 51 1e-023
gb|H76960.1|H76960 17391 Lambda-PRL2 Arabidopsis thaliana c... 109 2e-022
gb|Z34204.1|Z34204 ATTS3238 Versailles-VB Arabidopsis thali... 62 2e-022
dbj|AB008491.1| Arabidopsis thaliana ARR6 gene for response... 49 3e-022
gb|AF170550.1|AF170550 Arabidopsis thaliana germin-like pro... 53 6e-022
>ref|NM_129695.3| Arabidopsis thaliana ATRR3 (RESPONSE REGULATOR 3); transcription
regulator AT2G41310 (ATRR3) mRNA, complete cds
Length = 1824
Score = 149 bits (321), Expect(2) = 6e-055
Identities = 59/79 (74%), Positives = 71/79 (89%)
Frame = -2 / +3
Query: 693 HQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEE 514
HQE++++LIITDYCMPGMTGYDLL +VK S++ IPVVIMSSENVPARISRCL++GAEE
Sbjct: 546 HQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEE 725
Query: 513 FFLKPVKPADMKKLKSHLL 457
FFLKPVK AD+ KLK H++
Sbjct: 726 FFLKPVKLADLTKLKPHMM 782
Score = 87.7 bits (185), Expect(2) = 6e-055
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = -2 / +3
Query: 912 VLDAESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLR 763
V++ ES+FHVLAVDDS+ DRK+IE LL+ SS QVTTVDSG+KALE LGLR
Sbjct: 351 VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLR 500
>ref|NM_115563.2| Arabidopsis thaliana ARR9 (RESPONSE REACTOR 4); transcription
regulator AT3G57040 (ARR9) mRNA, complete cds
Length = 1354
Score = 150 bits (323), Expect(2) = 6e-055
Identities = 60/80 (75%), Positives = 72/80 (90%)
Frame = -2 / +2
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+HQ ++V+LIITDYCMPGMTGYDLL +VK SS+ DIPVVIMSSENVPARISRCL++GAE
Sbjct: 647 NHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAE 826
Query: 516 EFFLKPVKPADMKKLKSHLL 457
EFFLKPV+ AD+ KLK H++
Sbjct: 827 EFFLKPVRLADLNKLKPHMM 886
Score = 108 bits (231), Expect = 2e-022
Identities = 49/83 (59%), Positives = 60/83 (72%)
Frame = +2 / -2
Query: 434 FWLGCFRFSRCDLSFFMSAGFTGFRKNSSAPSCKHLLIRAGTFSDDMITTGMSVSDEDPF 613
FW F F + SA TGF+KNSSAPS KHLLI AGTFS+DMITTG+S+ +D
Sbjct: 909 FWFFNFVFII*GFNLLRSANLTGFKKNSSAPSSKHLLILAGTFSEDMITTGISLKADDSL 730
Query: 614 TRVSRSYPVMPGMQ*SVMMRLTS 682
T +S+S PVMPG+Q*SV++R TS
Sbjct: 729 TFLSKS*PVMPGIQ*SVIIRFTS 661
Score = 86.8 bits (183), Expect(2) = 6e-055
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = -2 / +2
Query: 903 AESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDN 757
AES+FHVLAVDDS+ DRKLIE LL+ SS QVTTVDSG+KALE LGLR +
Sbjct: 458 AESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQS 604
>dbj|AB010917.1| Arabidopsis thaliana mRNA for responce reactor3, complete cds
Length = 1346
Score = 149 bits (321), Expect(2) = 6e-055
Identities = 59/79 (74%), Positives = 71/79 (89%)
Frame = -2 / +1
Query: 693 HQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEE 514
HQE++++LIITDYCMPGMTGYDLL +VK S++ IPVVIMSSENVPARISRCL++GAEE
Sbjct: 409 HQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEE 588
Query: 513 FFLKPVKPADMKKLKSHLL 457
FFLKPVK AD+ KLK H++
Sbjct: 589 FFLKPVKLADLTKLKPHMM 645
Score = 87.7 bits (185), Expect(2) = 6e-055
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = -2 / +1
Query: 912 VLDAESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLR 763
V++ ES+FHVLAVDDS+ DRK+IE LL+ SS QVTTVDSG+KALE LGLR
Sbjct: 214 VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLR 363
>gb|AY090234.1| Arabidopsis thaliana AT3g57040/F24I3_120 mRNA, complete cds
Length = 1284
Score = 150 bits (323), Expect(2) = 6e-055
Identities = 60/80 (75%), Positives = 72/80 (90%)
Frame = -2 / +1
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+HQ ++V+LIITDYCMPGMTGYDLL +VK SS+ DIPVVIMSSENVPARISRCL++GAE
Sbjct: 649 NHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAE 828
Query: 516 EFFLKPVKPADMKKLKSHLL 457
EFFLKPV+ AD+ KLK H++
Sbjct: 829 EFFLKPVRLADLNKLKPHMM 888
Score = 108 bits (231), Expect = 2e-022
Identities = 49/83 (59%), Positives = 60/83 (72%)
Frame = +2 / -2
Query: 434 FWLGCFRFSRCDLSFFMSAGFTGFRKNSSAPSCKHLLIRAGTFSDDMITTGMSVSDEDPF 613
FW F F + SA TGF+KNSSAPS KHLLI AGTFS+DMITTG+S+ +D
Sbjct: 911 FWFFNFVFII*GFNLLRSANLTGFKKNSSAPSSKHLLILAGTFSEDMITTGISLKADDSL 732
Query: 614 TRVSRSYPVMPGMQ*SVMMRLTS 682
T +S+S PVMPG+Q*SV++R TS
Sbjct: 731 TFLSKS*PVMPGIQ*SVIIRFTS 663
Score = 86.8 bits (183), Expect(2) = 6e-055
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = -2 / +1
Query: 903 AESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDN 757
AES+FHVLAVDDS+ DRKLIE LL+ SS QVTTVDSG+KALE LGLR +
Sbjct: 460 AESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQS 606
>dbj|AB010918.1| Arabidopsis thaliana mRNA for responce reactor4, complete cds
Length = 1087
Score = 150 bits (323), Expect(2) = 6e-055
Identities = 60/80 (75%), Positives = 72/80 (90%)
Frame = -2 / +1
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+HQ ++V+LIITDYCMPGMTGYDLL +VK SS+ DIPVVIMSSENVPARISRCL++GAE
Sbjct: 406 NHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAE 585
Query: 516 EFFLKPVKPADMKKLKSHLL 457
EFFLKPV+ AD+ KLK H++
Sbjct: 586 EFFLKPVRLADLNKLKPHMM 645
Score = 108 bits (231), Expect = 2e-022
Identities = 49/83 (59%), Positives = 60/83 (72%)
Frame = +2 / -3
Query: 434 FWLGCFRFSRCDLSFFMSAGFTGFRKNSSAPSCKHLLIRAGTFSDDMITTGMSVSDEDPF 613
FW F F + SA TGF+KNSSAPS KHLLI AGTFS+DMITTG+S+ +D
Sbjct: 668 FWFFNFVFII*GFNLLRSANLTGFKKNSSAPSSKHLLILAGTFSEDMITTGISLKADDSL 489
Query: 614 TRVSRSYPVMPGMQ*SVMMRLTS 682
T +S+S PVMPG+Q*SV++R TS
Sbjct: 488 TFLSKS*PVMPGIQ*SVIIRFTS 420
Score = 86.8 bits (183), Expect(2) = 6e-055
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = -2 / +1
Query: 903 AESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDN 757
AES+FHVLAVDDS+ DRKLIE LL+ SS QVTTVDSG+KALE LGLR +
Sbjct: 217 AESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQS 363
>gb|AY133571.1| Arabidopsis thaliana At3g57040/F24I3_120 mRNA, complete cds
Length = 705
Score = 150 bits (323), Expect(2) = 6e-055
Identities = 60/80 (75%), Positives = 72/80 (90%)
Frame = -2 / +1
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+HQ ++V+LIITDYCMPGMTGYDLL +VK SS+ DIPVVIMSSENVPARISRCL++GAE
Sbjct: 202 NHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAE 381
Query: 516 EFFLKPVKPADMKKLKSHLL 457
EFFLKPV+ AD+ KLK H++
Sbjct: 382 EFFLKPVRLADLNKLKPHMM 441
Score = 108 bits (231), Expect = 2e-022
Identities = 49/83 (59%), Positives = 60/83 (72%)
Frame = +2 / -2
Query: 434 FWLGCFRFSRCDLSFFMSAGFTGFRKNSSAPSCKHLLIRAGTFSDDMITTGMSVSDEDPF 613
FW F F + SA TGF+KNSSAPS KHLLI AGTFS+DMITTG+S+ +D
Sbjct: 464 FWFFNFVFII*GFNLLRSANLTGFKKNSSAPSSKHLLILAGTFSEDMITTGISLKADDSL 285
Query: 614 TRVSRSYPVMPGMQ*SVMMRLTS 682
T +S+S PVMPG+Q*SV++R TS
Sbjct: 284 TFLSKS*PVMPGIQ*SVIIRFTS 216
Score = 86.8 bits (183), Expect(2) = 6e-055
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = -2 / +1
Query: 903 AESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDN 757
AES+FHVLAVDDS+ DRKLIE LL+ SS QVTTVDSG+KALE LGLR +
Sbjct: 13 AESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQS 159
>gb|AY074643.1| Arabidopsis thaliana At2g41310/F13H10.14 mRNA, complete cds
Length = 680
Score = 149 bits (321), Expect(2) = 6e-055
Identities = 59/79 (74%), Positives = 71/79 (89%)
Frame = -2 / +3
Query: 693 HQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEE 514
HQE++++LIITDYCMPGMTGYDLL +VK S++ IPVVIMSSENVPARISRCL++GAEE
Sbjct: 201 HQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEE 380
Query: 513 FFLKPVKPADMKKLKSHLL 457
FFLKPVK AD+ KLK H++
Sbjct: 381 FFLKPVKLADLTKLKPHMM 437
Score = 87.7 bits (185), Expect(2) = 6e-055
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = -2 / +3
Query: 912 VLDAESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLR 763
V++ ES+FHVLAVDDS+ DRK+IE LL+ SS QVTTVDSG+KALE LGLR
Sbjct: 6 VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLR 155
>emb|AX505944.1| Sequence 639 from Patent WO0216655
Length = 678
Score = 149 bits (321), Expect(2) = 6e-055
Identities = 59/79 (74%), Positives = 71/79 (89%)
Frame = -2 / +1
Query: 693 HQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEE 514
HQE++++LIITDYCMPGMTGYDLL +VK S++ IPVVIMSSENVPARISRCL++GAEE
Sbjct: 199 HQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEE 378
Query: 513 FFLKPVKPADMKKLKSHLL 457
FFLKPVK AD+ KLK H++
Sbjct: 379 FFLKPVKLADLTKLKPHMM 435
Score = 87.7 bits (185), Expect(2) = 6e-055
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = -2 / +1
Query: 912 VLDAESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLR 763
V++ ES+FHVLAVDDS+ DRK+IE LL+ SS QVTTVDSG+KALE LGLR
Sbjct: 4 VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLR 153
>ref|NM_104686.2| Arabidopsis thaliana ARR3 (RESPONSE REGULATOR 3); transcription
regulator/ two-component response regulator AT1G59940
(ARR3) mRNA, complete cds
Length = 1051
Score = 127 bits (271), Expect(2) = 3e-041
Identities = 50/79 (63%), Positives = 65/79 (82%)
Frame = -2 / +1
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+ + V LIITDYCMPGMTGY+LL ++K S+S ++PVVIMSSENV RI RCL++GAE
Sbjct: 322 EFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAE 501
Query: 516 EFFLKPVKPADMKKLKSHL 460
+F LKPVK AD+K+L+S+L
Sbjct: 502 DFLLKPVKLADVKRLRSYL 558
Score = 64.8 bits (135), Expect(2) = 3e-041
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGA 751
HVLAVDDS++DR +IE LL+ +S +VT VDSG +ALE LGL D+ A
Sbjct: 178 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKA 315
>dbj|AB008486.1| Arabidopsis thaliana ARR3 mRNA for response regulator 3, complete
cds
Length = 1028
Score = 127 bits (271), Expect(2) = 3e-041
Identities = 50/79 (63%), Positives = 65/79 (82%)
Frame = -2 / +2
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+ + V LIITDYCMPGMTGY+LL ++K S+S ++PVVIMSSENV RI RCL++GAE
Sbjct: 299 EFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAE 478
Query: 516 EFFLKPVKPADMKKLKSHL 460
+F LKPVK AD+K+L+S+L
Sbjct: 479 DFLLKPVKLADVKRLRSYL 535
Score = 64.8 bits (135), Expect(2) = 3e-041
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = -2 / +2
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGA 751
HVLAVDDS++DR +IE LL+ +S +VT VDSG +ALE LGL D+ A
Sbjct: 155 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKA 292
>gb|AU237462.1|AU237462 AU237462 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-27-H23 5',
mRNA sequence
Length = 627
Score = 127 bits (271), Expect(2) = 3e-041
Identities = 50/79 (63%), Positives = 65/79 (82%)
Frame = -2 / +1
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+ + V LIITDYCMPGMTGY+LL ++K S+S ++PVVIMSSENV RI RCL++GAE
Sbjct: 322 EFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAE 501
Query: 516 EFFLKPVKPADMKKLKSHL 460
+F LKPVK AD+K+L+S+L
Sbjct: 502 DFLLKPVKLADVKRLRSYL 558
Score = 64.8 bits (135), Expect(2) = 3e-041
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGA 751
HVLAVDDS++DR +IE LL+ +S +VT VDSG +ALE LGL D+ A
Sbjct: 178 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKA 315
>ref|NM_100921.2| Arabidopsis thaliana ARR4 (RESPONSE REGULATOR 4); transcription
regulator/ two-component response regulator AT1G10470
(ARR4) mRNA, complete cds
Length = 1275
Score = 127 bits (273), Expect(2) = 9e-041
Identities = 50/79 (63%), Positives = 65/79 (82%)
Frame = -2 / +1
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+ + V LIITDYCMPGMTGY+LL ++K SS+ ++PVVIMSSENV RI RCL++GA+
Sbjct: 445 EFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQ 624
Query: 516 EFFLKPVKPADMKKLKSHL 460
+F LKPVK AD+K+L+SHL
Sbjct: 625 DFLLKPVKLADVKRLRSHL 681
Score = 62.0 bits (129), Expect(2) = 9e-041
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGA 751
HVLAVDDS++DR +IE LL+ +S +VT VDSG +ALE LGL + A
Sbjct: 301 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKA 438
>dbj|AB010915.1| Arabidopsis thaliana mRNA for responce regulator1, complete cds
Length = 1227
Score = 127 bits (273), Expect(2) = 9e-041
Identities = 50/79 (63%), Positives = 65/79 (82%)
Frame = -2 / +1
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+ + V LIITDYCMPGMTGY+LL ++K SS+ ++PVVIMSSENV RI RCL++GA+
Sbjct: 445 EFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQ 624
Query: 516 EFFLKPVKPADMKKLKSHL 460
+F LKPVK AD+K+L+SHL
Sbjct: 625 DFLLKPVKLADVKRLRSHL 681
Score = 62.0 bits (129), Expect(2) = 9e-041
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGA 751
HVLAVDDS++DR +IE LL+ +S +VT VDSG +ALE LGL + A
Sbjct: 301 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKA 438
>dbj|AB008487.1| Arabidopsis thaliana ARR4 mRNA for response regulator 4, complete
cds
Length = 1193
Score = 127 bits (273), Expect(2) = 9e-041
Identities = 50/79 (63%), Positives = 65/79 (82%)
Frame = -2 / +3
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+ + V LIITDYCMPGMTGY+LL ++K SS+ ++PVVIMSSENV RI RCL++GA+
Sbjct: 363 EFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQ 542
Query: 516 EFFLKPVKPADMKKLKSHL 460
+F LKPVK AD+K+L+SHL
Sbjct: 543 DFLLKPVKLADVKRLRSHL 599
Score = 62.0 bits (129), Expect(2) = 9e-041
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -2 / +3
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGA 751
HVLAVDDS++DR +IE LL+ +S +VT VDSG +ALE LGL + A
Sbjct: 219 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKA 356
>gb|AF057282.1|AF057282 Arabidopsis thaliana two-component response regulator homolog
(IBC7) mRNA, complete cds
Length = 1056
Score = 127 bits (273), Expect(2) = 9e-041
Identities = 50/79 (63%), Positives = 65/79 (82%)
Frame = -2 / +1
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+ + V LIITDYCMPGMTGY+LL ++K SS+ ++PVVIMSSENV RI RCL++GA+
Sbjct: 322 EFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQ 501
Query: 516 EFFLKPVKPADMKKLKSHL 460
+F LKPVK AD+K+L+SHL
Sbjct: 502 DFLLKPVKLADVKRLRSHL 558
Score = 62.0 bits (129), Expect(2) = 9e-041
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGA 751
HVLAVDDS++DR +IE LL+ +S +VT VDSG +ALE LGL + A
Sbjct: 178 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKA 315
>emb|BX817831.1|CNS0ACG5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL43ZH11 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 979
Score = 127 bits (273), Expect(2) = 1e-040
Identities = 50/79 (63%), Positives = 65/79 (82%)
Frame = -2 / +2
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+ + V LIITDYCMPGMTGY+LL ++K SS+ ++PVVIMSSENV RI RCL++GA+
Sbjct: 326 EFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQ 505
Query: 516 EFFLKPVKPADMKKLKSHL 460
+F LKPVK AD+K+L+SHL
Sbjct: 506 DFLLKPVKLADVKRLRSHL 562
Score = 62.0 bits (129), Expect(2) = 1e-040
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -2 / +2
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGA 751
HVLAVDDS++DR +IE LL+ +S +VT VDSG +ALE LGL + A
Sbjct: 182 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKA 319
>emb|AX506717.1| Sequence 1412 from Patent WO0216655
Length = 780
Score = 127 bits (273), Expect(2) = 1e-040
Identities = 50/79 (63%), Positives = 65/79 (82%)
Frame = -2 / +1
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+ + V LIITDYCMPGMTGY+LL ++K SS+ ++PVVIMSSENV RI RCL++GA+
Sbjct: 247 EFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQ 426
Query: 516 EFFLKPVKPADMKKLKSHL 460
+F LKPVK AD+K+L+SHL
Sbjct: 427 DFLLKPVKLADVKRLRSHL 483
Score = 62.0 bits (129), Expect(2) = 1e-040
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGA 751
HVLAVDDS++DR +IE LL+ +S +VT VDSG +ALE LGL + A
Sbjct: 103 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKA 240
>gb|AV822952.1|AV822952 AV822952 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-13-J02 5',
mRNA sequence
Length = 669
Score = 127 bits (273), Expect(2) = 1e-040
Identities = 50/79 (63%), Positives = 65/79 (82%)
Frame = -2 / +2
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+ + V LIITDYCMPGMTGY+LL ++K SS+ ++PVVIMSSENV RI RCL++GA+
Sbjct: 305 EFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQ 484
Query: 516 EFFLKPVKPADMKKLKSHL 460
+F LKPVK AD+K+L+SHL
Sbjct: 485 DFLLKPVKLADVKRLRSHL 541
Score = 62.0 bits (129), Expect(2) = 1e-040
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -2 / +2
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGA 751
HVLAVDDS++DR +IE LL+ +S +VT VDSG +ALE LGL + A
Sbjct: 161 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKA 298
>gb|AF305722.1|AF305722 Arabidopsis thaliana ecotype Columbia response regulator 17 mRNA,
complete cds
Length = 462
Score = 120 bits (257), Expect(2) = 1e-040
Identities = 47/74 (63%), Positives = 63/74 (85%)
Frame = -2 / +1
Query: 678 VSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEFFLKP 499
V+LIITDYCMPGMTG++LL +VK SS+L ++PVVI+SSEN+P RI++CL GA+ F KP
Sbjct: 226 VNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKP 405
Query: 498 VKPADMKKLKSHLL 457
+K +D++KLK HLL
Sbjct: 406 LKLSDVEKLKCHLL 447
Score = 68.9 bits (144), Expect(2) = 1e-040
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = -2 / +1
Query: 900 ESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGAEDA 742
E HVLAVDD++IDRKL+E +LK SS +VTT ++G +ALE LGL D D+
Sbjct: 49 EEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDS 207
>ref|NM_115496.1| Arabidopsis thaliana ARR17; transcription regulator/ two-component
response regulator AT3G56380 (ARR17) mRNA, complete cds
Length = 462
Score = 120 bits (257), Expect(2) = 1e-040
Identities = 47/74 (63%), Positives = 63/74 (85%)
Frame = -2 / +1
Query: 678 VSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEFFLKP 499
V+LIITDYCMPGMTG++LL +VK SS+L ++PVVI+SSEN+P RI++CL GA+ F KP
Sbjct: 226 VNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKP 405
Query: 498 VKPADMKKLKSHLL 457
+K +D++KLK HLL
Sbjct: 406 LKLSDVEKLKCHLL 447
Score = 68.9 bits (144), Expect(2) = 1e-040
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = -2 / +1
Query: 900 ESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGAEDA 742
E HVLAVDD++IDRKL+E +LK SS +VTT ++G +ALE LGL D D+
Sbjct: 49 EEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDS 207
>emb|BX817837.1|CNS0ACFZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL44ZB06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 883
Score = 127 bits (272), Expect(2) = 9e-040
Identities = 50/79 (63%), Positives = 65/79 (82%)
Frame = -2 / +3
Query: 696 DHQEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAE 517
+ + V LIITDYCMPGMTGY+LL ++K SS+ ++PVVIMSSENV RI RCL++GA+
Sbjct: 279 EFDRLRVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQ 458
Query: 516 EFFLKPVKPADMKKLKSHL 460
+F LKPVK AD+K+L+SHL
Sbjct: 459 DFLLKPVKLADVKRLRSHL 515
Score = 59.3 bits (123), Expect(2) = 9e-040
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = -2 / +3
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGA 751
HV AVDDSI+DR +IE LL+ +S +VT VDSG +ALE LGL + A
Sbjct: 135 HV*AVDDSIVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKA 272
>gb|AF305721.1|AF305721 Arabidopsis thaliana ecotype Columbia response regulator 16 mRNA,
complete cds
Length = 495
Score = 123 bits (264), Expect(2) = 9e-040
Identities = 49/74 (66%), Positives = 63/74 (85%)
Frame = -2 / +1
Query: 678 VSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEFFLKP 499
VSLIITDYCMPGMTG++LL +VK SS+L ++PVVIMSSEN+P RI++CL GA+ F KP
Sbjct: 259 VSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKP 438
Query: 498 VKPADMKKLKSHLL 457
+K AD++KLK HL+
Sbjct: 439 LKLADVEKLKCHLM 480
Score = 62.9 bits (131), Expect(2) = 9e-040
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = -2 / +1
Query: 900 ESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRD 760
+ HVLAVDD++IDRKL+E LLK S +VTT ++ +ALE LGL D
Sbjct: 76 DEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGD 216
>emb|AX652028.1| Sequence 924 from Patent WO03000898
Length = 495
Score = 123 bits (264), Expect(2) = 9e-040
Identities = 49/74 (66%), Positives = 63/74 (85%)
Frame = -2 / +1
Query: 678 VSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEFFLKP 499
VSLIITDYCMPGMTG++LL +VK SS+L ++PVVIMSSEN+P RI++CL GA+ F KP
Sbjct: 259 VSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKP 438
Query: 498 VKPADMKKLKSHLL 457
+K AD++KLK HL+
Sbjct: 439 LKLADVEKLKCHLM 480
Score = 62.9 bits (131), Expect(2) = 9e-040
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = -2 / +1
Query: 900 ESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRD 760
+ HVLAVDD++IDRKL+E LLK S +VTT ++ +ALE LGL D
Sbjct: 76 DEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGD 216
>emb|AJ279079.1|ATH279079 Arabidopsis thaliana mRNA for putative type A response regulator
(ARR15 gene)
Length = 495
Score = 123 bits (264), Expect(2) = 9e-040
Identities = 49/74 (66%), Positives = 63/74 (85%)
Frame = -2 / +1
Query: 678 VSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEFFLKP 499
VSLIITDYCMPGMTG++LL +VK SS+L ++PVVIMSSEN+P RI++CL GA+ F KP
Sbjct: 259 VSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKP 438
Query: 498 VKPADMKKLKSHLL 457
+K AD++KLK HL+
Sbjct: 439 LKLADVEKLKCHLM 480
Score = 62.9 bits (131), Expect(2) = 9e-040
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = -2 / +1
Query: 900 ESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRD 760
+ HVLAVDD++IDRKL+E LLK S +VTT ++ +ALE LGL D
Sbjct: 76 DEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGD 216
>ref|NM_129629.1| Arabidopsis thaliana ARR16; transcription regulator/ two-component
response regulator AT2G40670 (ARR16) mRNA, complete cds
Length = 495
Score = 123 bits (264), Expect(2) = 9e-040
Identities = 49/74 (66%), Positives = 63/74 (85%)
Frame = -2 / +1
Query: 678 VSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEFFLKP 499
VSLIITDYCMPGMTG++LL +VK SS+L ++PVVIMSSEN+P RI++CL GA+ F KP
Sbjct: 259 VSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKP 438
Query: 498 VKPADMKKLKSHLL 457
+K AD++KLK HL+
Sbjct: 439 LKLADVEKLKCHLM 480
Score = 62.9 bits (131), Expect(2) = 9e-040
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = -2 / +1
Query: 900 ESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRD 760
+ HVLAVDD++IDRKL+E LLK S +VTT ++ +ALE LGL D
Sbjct: 76 DEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGD 216
>dbj|AB008490.1| Arabidopsis thaliana ARR7 mRNA for response regulator 7, complete
cds
Length = 740
Score = 115 bits (246), Expect(2) = 8e-039
Identities = 44/78 (56%), Positives = 64/78 (82%)
Frame = -2 / +1
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ V+LI+TDY MPG++GYDLL ++K SS+ ++PVVIMSSEN+ RI CL++GAEEF
Sbjct: 256 KDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEF 435
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K++K ++
Sbjct: 436 LLKPVKLADVKRIKQLIM 489
Score = 68.0 bits (142), Expect(2) = 8e-039
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDSI+DRK+IE LL+ SS +VTTV+SG +AL+ LGL
Sbjct: 106 HVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGL 228
>ref|NM_101763.1| Arabidopsis thaliana ARR7 (RESPONSE REGULATOR 7); transcription
regulator/ two-component response regulator AT1G19050
(ARR7) mRNA, complete cds
Length = 740
Score = 115 bits (246), Expect(2) = 8e-039
Identities = 44/78 (56%), Positives = 64/78 (82%)
Frame = -2 / +1
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ V+LI+TDY MPG++GYDLL ++K SS+ ++PVVIMSSEN+ RI CL++GAEEF
Sbjct: 256 KDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEF 435
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K++K ++
Sbjct: 436 LLKPVKLADVKRIKQLIM 489
Score = 68.0 bits (142), Expect(2) = 8e-039
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDSI+DRK+IE LL+ SS +VTTV+SG +AL+ LGL
Sbjct: 106 HVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGL 228
>gb|AF305720.1|AF305720 Arabidopsis thaliana ecotype Columbia response regulator 15 mRNA,
complete cds
Length = 621
Score = 117 bits (250), Expect(2) = 8e-039
Identities = 46/78 (58%), Positives = 65/78 (83%)
Frame = -2 / +1
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ V+LI+TDY MPG+TGY+LL ++K SS+L +IPVVIMSSEN+ RI +C+ +GAEEF
Sbjct: 205 KDLKVNLIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEF 384
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K+LK ++
Sbjct: 385 LLKPVKLADVKRLKELIM 438
Score = 66.1 bits (138), Expect(2) = 8e-039
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS +DRK+IE LLK S+ +VTTV+SG +AL+ LGL
Sbjct: 55 HVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGL 177
>ref|NM_106147.1| Arabidopsis thaliana ARR15 (RESPONSE REGULATOR 15); transcription
regulator AT1G74890 (ARR15) mRNA, complete cds
Length = 621
Score = 117 bits (250), Expect(2) = 8e-039
Identities = 46/78 (58%), Positives = 65/78 (83%)
Frame = -2 / +1
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ V+LI+TDY MPG+TGY+LL ++K SS+L +IPVVIMSSEN+ RI +C+ +GAEEF
Sbjct: 205 KDLKVNLIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEF 384
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K+LK ++
Sbjct: 385 LLKPVKLADVKRLKELIM 438
Score = 66.1 bits (138), Expect(2) = 8e-039
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS +DRK+IE LLK S+ +VTTV+SG +AL+ LGL
Sbjct: 55 HVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGL 177
>emb|AX506021.1| Sequence 716 from Patent WO0216655
Length = 621
Score = 115 bits (246), Expect(2) = 8e-039
Identities = 44/78 (56%), Positives = 64/78 (82%)
Frame = -2 / +1
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ V+LI+TDY MPG++GYDLL ++K SS+ ++PVVIMSSEN+ RI CL++GAEEF
Sbjct: 223 KDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEF 402
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K++K ++
Sbjct: 403 LLKPVKLADVKRIKQLIM 456
Score = 68.0 bits (142), Expect(2) = 8e-039
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDSI+DRK+IE LL+ SS +VTTV+SG +AL+ LGL
Sbjct: 73 HVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGL 195
>emb|AX651708.1| Sequence 539 from Patent WO03000898
Length = 620
Score = 115 bits (246), Expect(2) = 8e-039
Identities = 44/78 (56%), Positives = 64/78 (82%)
Frame = -2 / +1
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ V+LI+TDY MPG++GYDLL ++K SS+ ++PVVIMSSEN+ RI CL++GAEEF
Sbjct: 223 KDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEF 402
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K++K ++
Sbjct: 403 LLKPVKLADVKRIKQLIM 456
Score = 68.0 bits (142), Expect(2) = 8e-039
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDSI+DRK+IE LL+ SS +VTTV+SG +AL+ LGL
Sbjct: 73 HVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGL 195
>ref|NM_114679.3| Arabidopsis thaliana ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5);
transcription regulator/ two-component response
regulator AT3G48100 (ARR5) mRNA, complete cds
Length = 1374
Score = 119 bits (254), Expect(2) = 2e-038
Identities = 46/78 (58%), Positives = 65/78 (83%)
Frame = -2 / +3
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ ++LI+TDY MPGMTGY+LL ++K SS+ +IPVVIMSSEN+ RI RCL++GAE+F
Sbjct: 363 EDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDF 542
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K+L+ L+
Sbjct: 543 LLKPVKLADVKRLRDSLM 596
Score = 62.9 bits (131), Expect(2) = 2e-038
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -2 / +3
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS++DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 210 HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 332
>emb|BX824631.1|CNS0A6YD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH60ZH04 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1337
Score = 119 bits (254), Expect(2) = 2e-038
Identities = 46/78 (58%), Positives = 65/78 (83%)
Frame = -2 / +2
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ ++LI+TDY MPGMTGY+LL ++K SS+ +IPVVIMSSEN+ RI RCL++GAE+F
Sbjct: 320 EDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDF 499
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K+L+ L+
Sbjct: 500 LLKPVKLADVKRLRDSLM 553
Score = 62.9 bits (131), Expect(2) = 2e-038
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -2 / +2
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS++DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 167 HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSSTRALQYLGL 289
>gb|AF057281.1|AF057281 Arabidopsis thaliana two-component response regulator homolog
(IBC6) mRNA, complete cds
Length = 1298
Score = 119 bits (254), Expect(2) = 2e-038
Identities = 46/78 (58%), Positives = 65/78 (83%)
Frame = -2 / +1
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ ++LI+TDY MPGMTGY+LL ++K SS+ +IPVVIMSSEN+ RI RCL++GAE+F
Sbjct: 286 EDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDF 465
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K+L+ L+
Sbjct: 466 LLKPVKLADVKRLRDSLM 519
Score = 62.9 bits (131), Expect(2) = 2e-038
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS++DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 133 HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 255
>dbj|AB010916.1| Arabidopsis thaliana mRNA for responce reactor2, complete cds
Length = 980
Score = 119 bits (254), Expect(2) = 2e-038
Identities = 46/78 (58%), Positives = 65/78 (83%)
Frame = -2 / +3
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ ++LI+TDY MPGMTGY+LL ++K SS+ +IPVVIMSSEN+ RI RCL++GAE+F
Sbjct: 363 EDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDF 542
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K+L+ L+
Sbjct: 543 LLKPVKLADVKRLRDSLM 596
Score = 62.9 bits (131), Expect(2) = 2e-038
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -2 / +3
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS++DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 210 HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 332
>gb|AY072390.1| Arabidopsis thaliana response reactor 2 (ATRR2) (At3g48100) mRNA,
complete cds
Length = 911
Score = 119 bits (254), Expect(2) = 2e-038
Identities = 46/78 (58%), Positives = 65/78 (83%)
Frame = -2 / +1
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ ++LI+TDY MPGMTGY+LL ++K SS+ +IPVVIMSSEN+ RI RCL++GAE+F
Sbjct: 298 EDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDF 477
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K+L+ L+
Sbjct: 478 LLKPVKLADVKRLRDSLM 531
Score = 62.9 bits (131), Expect(2) = 2e-038
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS++DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 145 HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 267
>dbj|AB008488.1| Arabidopsis thaliana ARR5 mRNA for response regulator 5, complete
cds
Length = 891
Score = 119 bits (254), Expect(2) = 2e-038
Identities = 46/78 (58%), Positives = 65/78 (83%)
Frame = -2 / +2
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ ++LI+TDY MPGMTGY+LL ++K SS+ +IPVVIMSSEN+ RI RCL++GAE+F
Sbjct: 278 EDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDF 457
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K+L+ L+
Sbjct: 458 LLKPVKLADVKRLRDSLM 511
Score = 62.9 bits (131), Expect(2) = 2e-038
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -2 / +2
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS++DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 125 HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 247
>gb|AV825102.1|AV825102 AV825102 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-86-G21 5',
mRNA sequence
Length = 645
Score = 119 bits (254), Expect(2) = 2e-038
Identities = 46/78 (58%), Positives = 65/78 (83%)
Frame = -2 / +3
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ ++LI+TDY MPGMTGY+LL ++K SS+ +IPVVIMSSEN+ RI RCL++GAE+F
Sbjct: 297 EDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDF 476
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K+L+ L+
Sbjct: 477 LLKPVKLADVKRLRDSLM 530
Score = 62.9 bits (131), Expect(2) = 2e-038
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -2 / +3
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS++DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 144 HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 266
>gb|AY114698.1| Arabidopsis thaliana response reactor 2 (ATRR2) (At3g48100) mRNA,
complete cds
Length = 634
Score = 119 bits (254), Expect(2) = 2e-038
Identities = 46/78 (58%), Positives = 65/78 (83%)
Frame = -2 / +1
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ ++LI+TDY MPGMTGY+LL ++K SS+ +IPVVIMSSEN+ RI RCL++GAE+F
Sbjct: 229 EDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDF 408
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K+L+ L+
Sbjct: 409 LLKPVKLADVKRLRDSLM 462
Score = 62.9 bits (131), Expect(2) = 2e-038
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS++DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 76 HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 198
>gb|AV536923.1|AV536923 AV536923 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0702R 5', mRNA
sequence
Length = 565
Score = 119 bits (254), Expect(2) = 2e-038
Identities = 46/78 (58%), Positives = 65/78 (83%)
Frame = -2 / +3
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ ++LI+TDY MPGMTGY+LL ++K SS+ +IPVVIMSSEN+ RI RCL++GAE+F
Sbjct: 267 EDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDF 446
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K+L+ L+
Sbjct: 447 LLKPVKLADVKRLRDSLM 500
Score = 62.9 bits (131), Expect(2) = 2e-038
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -2 / +3
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS++DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 114 HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 236
>emb|AX507119.1| Sequence 1814 from Patent WO0216655
Length = 555
Score = 119 bits (254), Expect(2) = 2e-038
Identities = 46/78 (58%), Positives = 65/78 (83%)
Frame = -2 / +1
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ ++LI+TDY MPGMTGY+LL ++K SS+ +IPVVIMSSEN+ RI RCL++GAE+F
Sbjct: 229 EDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDF 408
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K+L+ L+
Sbjct: 409 LLKPVKLADVKRLRDSLM 462
Score = 62.9 bits (131), Expect(2) = 2e-038
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS++DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 76 HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 198
>gb|CB255113.1|CB255113 50-E018428-019-008-C14-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768C148Q 5-PRIME, mRNA sequence
Length = 654
Score = 113 bits (241), Expect(2) = 4e-038
Identities = 43/78 (55%), Positives = 64/78 (82%)
Frame = -2 / +1
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ V+LI+TDY MPG++GYDLL+++K SS+ ++PVVIMSSEN+ RI CL +GAEEF
Sbjct: 322 KDLKVNLIVTDYSMPGLSGYDLLSKIKESSAFIEVPVVIMSSENILPRIRECLTEGAEEF 501
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK AD+K+++ ++
Sbjct: 502 LLKPVKLADVKRIQQLIM 555
Score = 68.0 bits (142), Expect(2) = 4e-038
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDSI+DRK+IE LL+ SS +VTTV+SG +AL+ LGL
Sbjct: 172 HVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGL 294
>ref|NM_125686.2| Arabidopsis thaliana ARR6 (RESPONSE REGULATOR 6); transcription
regulator/ two-component response regulator AT5G62920
(ARR6) mRNA, complete cds
Length = 974
Score = 117 bits (251), Expect(2) = 2e-037
Identities = 45/78 (57%), Positives = 65/78 (83%)
Frame = -2 / +1
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ V+LI+TDY MPGMTGY+LL ++K SS+ ++PVVIMSSEN+ RI RCL++GAE+F
Sbjct: 280 EDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDF 459
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK +D+K+L+ L+
Sbjct: 460 LLKPVKLSDVKRLRDSLM 513
Score = 61.1 bits (127), Expect(2) = 2e-037
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS +DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 130 HVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 252
>dbj|AB008489.1| Arabidopsis thaliana ARR6 mRNA for response regulator 6, complete
cds
Length = 942
Score = 117 bits (251), Expect(2) = 2e-037
Identities = 45/78 (57%), Positives = 65/78 (83%)
Frame = -2 / +2
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ V+LI+TDY MPGMTGY+LL ++K SS+ ++PVVIMSSEN+ RI RCL++GAE+F
Sbjct: 248 EDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDF 427
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK +D+K+L+ L+
Sbjct: 428 LLKPVKLSDVKRLRDSLM 481
Score = 61.1 bits (127), Expect(2) = 2e-037
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = -2 / +2
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS +DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 98 HVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 220
>emb|BX833185.1|CNS09YXU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL38ZB12 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 890
Score = 117 bits (251), Expect(2) = 2e-037
Identities = 45/78 (57%), Positives = 65/78 (83%)
Frame = -2 / +2
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ V+LI+TDY MPGMTGY+LL ++K SS+ ++PVVIMSSEN+ RI RCL++GAE+F
Sbjct: 239 EDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDF 418
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK +D+K+L+ L+
Sbjct: 419 LLKPVKLSDVKRLRDSLM 472
Score = 61.1 bits (127), Expect(2) = 2e-037
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = -2 / +2
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS +DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 89 HVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 211
>gb|BT004799.1| Arabidopsis thaliana At5g62920 gene, complete cds
Length = 561
Score = 117 bits (251), Expect(2) = 2e-037
Identities = 45/78 (57%), Positives = 65/78 (83%)
Frame = -2 / +1
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ V+LI+TDY MPGMTGY+LL ++K SS+ ++PVVIMSSEN+ RI RCL++GAE+F
Sbjct: 226 EDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDF 405
Query: 510 FLKPVKPADMKKLKSHLL 457
LKPVK +D+K+L+ L+
Sbjct: 406 LLKPVKLSDVKRLRDSLM 459
Score = 61.1 bits (127), Expect(2) = 2e-037
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS +DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 76 HVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 198
>gb|AU235762.1|AU235762 AU235762 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-41-J18 5',
mRNA sequence
Length = 541
Score = 112 bits (239), Expect(2) = 8e-036
Identities = 43/72 (59%), Positives = 60/72 (83%)
Frame = -2 / +1
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVKGSSSLTDIPVVIMSSENVPARISRCLQDGAEEF 511
+++ V+LI+TDY MPGMTGY+LL ++K SS+ ++PVVIMSSEN+ RI RCL++GAE+F
Sbjct: 280 EDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDF 459
Query: 510 FLKPVKPADMKK 475
LKPVK D+K+
Sbjct: 460 LLKPVKLXDVKR 495
Score = 61.1 bits (127), Expect(2) = 8e-036
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = -2 / +1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL 766
HVLAVDDS +DRK IE LL+ SS +VT VDS +AL+ LGL
Sbjct: 130 HVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 252
>emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BAC clone F24I3
Length = 91303
Score = 56.5 bits (117), Expect(5) = 2e-032
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = -2 / +3
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVK 610
Q ++V+LIITDYCMPGMTGYDLL +VK
Sbjct: 38472 QVVEVNLIITDYCMPGMTGYDLLKKVK 38552
Score = 54.2 bits (112), Expect(5) = 2e-032
Identities = 19/30 (63%), Positives = 27/30 (90%)
Frame = -2 / +2
Query: 546 ISRCLQDGAEEFFLKPVKPADMKKLKSHLL 457
++RCL++GAEEFFLKPV+ AD+ KLK H++
Sbjct: 38885 MNRCLEEGAEEFFLKPVRLADLNKLKPHMM 38974
Score = 53.3 bits (110), Expect(5) = 2e-032
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2 / +2
Query: 903 AESRFHVLAVDDSIIDRKLIEMLLKSSSYQ 814
AES+FHVLAVDDS+ DRKLIE LL+ SS Q
Sbjct: 38081 AESQFHVLAVDDSLFDRKLIERLLQKSSCQ 38170
Score = 46.9 bits (96), Expect(5) = 2e-032
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = -2 / +1
Query: 621 TRVKGSSSLTDIPVVIMSSENVPARISR 538
T ++ SS+ DIPVVIMSSENVPARISR
Sbjct: 38695 TILQESSAFRDIPVVIMSSENVPARISR 38778
Score = 36.3 bits (73), Expect(5) = 2e-032
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -2 / +1
Query: 813 VTTVDSGNKALELLGLRDN 757
VTTVDSG+KALE LGLR +
Sbjct: 38266 VTTVDSGSKALEFLGLRQS 38322
>gb|AC005662.3| Arabidopsis thaliana chromosome 2 clone F13H10 map CIC11C08, complete
sequence
Length = 96066
Score = 59.3 bits (123), Expect(5) = 2e-032
Identities = 21/27 (77%), Positives = 26/27 (96%)
Frame = -2 / -2
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVK 610
QE++++LIITDYCMPGMTGYDLL +VK
Sbjct: 49184 QEVEINLIITDYCMPGMTGYDLLKKVK 49104
Score = 54.7 bits (113), Expect(5) = 2e-032
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = -2 / -1
Query: 543 SRCLQDGAEEFFLKPVKPADMKKLKSHLL 457
+RCL++GAEEFFLKPVK AD+ KLK H++
Sbjct: 48669 NRCLEEGAEEFFLKPVKLADLTKLKPHMM 48583
Score = 54.7 bits (113), Expect(5) = 2e-032
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = -2 / -1
Query: 912 VLDAESRFHVLAVDDSIIDRKLIEMLLKSSSYQ 814
V++ ES+FHVLAVDDS+ DRK+IE LL+ SS Q
Sbjct: 49593 VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQ 49495
Score = 41.8 bits (85), Expect(5) = 2e-032
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -2 / -1
Query: 606 SSSLTDIPVVIMSSENVPARISR 538
S++ IPVVIMSSENVPARISR
Sbjct: 48867 SAAFRSIPVVIMSSENVPARISR 48799
Score = 36.8 bits (74), Expect(5) = 2e-032
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -2 / -2
Query: 819 YQVTTVDSGNKALELLGLR 763
+ VTTVDSG+KALE LGLR
Sbjct: 49391 FAVTTVDSGSKALEFLGLR 49335
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 52.8 bits (109), Expect(5) = 3e-031
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -2 / -2
Query: 690 QEIDVSLIITDYCMPGMTGYDLLTRVK 610
Q + V LIITDYCMPGMTGY+LL ++K
Sbjct: 3443153 QRLKVDLIITDYCMPGMTGYELLKKIK 3443073
Score = 51.9 bits (107), Expect(5) = 3e-031
Identities = 18/29 (62%), Positives = 27/29 (93%)
Frame = -2 / -3
Query: 546 ISRCLQDGAEEFFLKPVKPADMKKLKSHL 460
++RCL++GA++F LKPVK AD+K+L+SHL
Sbjct: 3442828 LNRCLEEGAQDFLLKPVKLADVKRLRSHL 3442742
Score = 39.6 bits (80), Expect(5) = 3e-031
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -3
Query: 606 SSSLTDIPVVIMSSENVPARISRC 535
SS+ ++PVVIMSSENV RI RC
Sbjct: 3442987 SSNFREVPVVIMSSENVLTRIDRC 3442916
Score = 37.3 bits (75), Expect(5) = 3e-031
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -2 / -1
Query: 888 HVLAVDDSIIDRKLIEMLLKSSS 820
HVLAVDDS++DR +IE LL+ +S
Sbjct: 3443478 HVLAVDDSLVDRIVIERLLRITS 3443410
Score = 28.1 bits (55), Expect(5) = 3e-031
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 813 VTTVDSGNKALELLGLRDNGA 751
VT VDSG +ALE LGL + A
Sbjct: 3443315 VTAVDSGWRALEFLGLDNEKA 3443253
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,343,643,601
Number of Sequences: 1013581
Number of extensions: 14567119
Number of successful extensions: 98428
Number of sequences better than 1.0e-020: 75
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 66696079056
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)