TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2619548.2.1
(691 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY052193.1| Arabidopsis thaliana AT5g46430/K11I1_2 mRNA,... 272 7e-072
ref|NM_124013.2| Arabidopsis thaliana structural constituen... 272 7e-072
gb|CB264390.1|CB264390 66-E015022-035-004-C18-T7R MPIZ-ADIS... 270 3e-071
gb|CF652437.1|CF652437 55-L020524-066-003-M14-SP6P MPIZ-ADI... 270 3e-071
gb|AY086736.1| Arabidopsis thaliana clone 271605 mRNA, comp... 269 8e-071
gb|AV828561.1|AV828561 AV828561 RAFL9 Arabidopsis thaliana ... 268 2e-070
gb|CK118688.1|CK118688 216h22.p1 AtM1 Arabidopsis thaliana ... 268 2e-070
gb|CK118706.1|CK118706 216e01.p1 AtM1 Arabidopsis thaliana ... 268 2e-070
gb|AY057566.1| Arabidopsis thaliana AT4g18100/F15J5_70 mRNA... 268 2e-070
gb|AY072399.1| Arabidopsis thaliana ribosomal protein L32 -... 268 2e-070
ref|NM_117920.2| Arabidopsis thaliana structural constituen... 268 2e-070
gb|CB264066.1|CB264066 95-E013840-035-001-M23-T7R MPIZ-ADIS... 266 6e-070
gb|BT000235.1| Arabidopsis thaliana ribosomal protein L32 -... 266 6e-070
emb|BX828680.1|CNS0A3L6 Arabidopsis thaliana Full-length cD... 266 6e-070
gb|AV821743.1|AV821743 AV821743 RAFL4 Arabidopsis thaliana ... 265 1e-069
gb|AY042872.1| Arabidopsis thaliana ribosomal protein L32 (... 265 1e-069
ref|NM_180811.1| Arabidopsis thaliana structural constituen... 265 1e-069
gb|AV829601.1|AV829601 AV829601 RAFL9 Arabidopsis thaliana ... 264 1e-069
gb|BE037666.1|BE037666 AA02E06 AA Arabidopsis thaliana cDNA... 264 3e-069
gb|AF446871.1|AF446871 Arabidopsis thaliana AT5g46430/K11I1... 263 5e-069
gb|BT002551.1| Arabidopsis thaliana ribosomal protein L32 (... 263 5e-069
gb|AV533831.1|AV533831 AV533831 Arabidopsis thaliana flower... 262 1e-068
emb|BX830633.1|CNS0A1Y2 Arabidopsis thaliana Full-length cD... 256 4e-067
gb|AA042212.1|AA042212 24533 CD4-13 Arabidopsis thaliana cD... 252 8e-066
gb|BP796437.1|BP796437 BP796437 RAFL5 Arabidopsis thaliana ... 206 7e-065
emb|AL110123.1|ATF15J5 Arabidopsis thaliana DNA chromosome ... 229 4e-063
emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosom... 229 1e-062
emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosom... 229 1e-062
gb|BP797201.1|BP797201 BP797201 RAFL14 Arabidopsis thaliana... 238 1e-061
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 229 1e-060
gb|AI993586.1|AI993586 701496688 A. thaliana, Ohio State cl... 226 3e-059
gb|BP813684.1|BP813684 BP813684 RAFL19 Arabidopsis thaliana... 230 3e-059
gb|BP815143.1|BP815143 BP815143 RAFL19 Arabidopsis thaliana... 230 3e-059
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 229 6e-059
gb|BP813243.1|BP813243 BP813243 RAFL19 Arabidopsis thaliana... 156 1e-058
gb|BP866168.1|BP866168 BP866168 RAFL21 Arabidopsis thaliana... 211 9e-058
gb|Z17739.1|Z17739 ATTS0313 Gif-SeedA+B Arabidopsis thalian... 220 3e-056
gb|BP824441.1|BP824441 BP824441 RAFL19 Arabidopsis thaliana... 180 7e-056
gb|AV532744.1|AV532744 AV532744 Arabidopsis thaliana flower... 219 9e-056
gb|T22115.1|T22115 4123 Lambda-PRL2 Arabidopsis thaliana cD... 217 2e-055
gb|BP860989.1|BP860989 BP860989 RAFL21 Arabidopsis thaliana... 217 3e-055
gb|BP797175.1|BP797175 BP797175 RAFL14 Arabidopsis thaliana... 137 5e-055
gb|BP853468.1|BP853468 BP853468 RAFL21 Arabidopsis thaliana... 119 5e-055
gb|T42610.1|T42610 5873 Lambda-PRL2 Arabidopsis thaliana cD... 215 1e-054
gb|BP848559.1|BP848559 BP848559 RAFL21 Arabidopsis thaliana... 148 1e-054
gb|BP814812.1|BP814812 BP814812 RAFL19 Arabidopsis thaliana... 213 6e-054
gb|BP858054.1|BP858054 BP858054 RAFL21 Arabidopsis thaliana... 210 5e-053
gb|BP845385.1|BP845385 BP845385 RAFL21 Arabidopsis thaliana... 156 8e-053
gb|BP814162.1|BP814162 BP814162 RAFL19 Arabidopsis thaliana... 208 1e-052
gb|BP863999.1|BP863999 BP863999 RAFL21 Arabidopsis thaliana... 103 1e-051
gb|BP635838.1|BP635838 BP635838 RAFL18 Arabidopsis thaliana... 189 1e-051
gb|AV807145.1|AV807145 AV807145 RAFL9 Arabidopsis thaliana ... 204 2e-051
gb|BP843527.1|BP843527 BP843527 RAFL21 Arabidopsis thaliana... 204 2e-051
gb|BP587278.1|BP587278 BP587278 RAFL15 Arabidopsis thaliana... 202 8e-051
gb|AV790705.1|AV790705 AV790705 RAFL6 Arabidopsis thaliana ... 200 4e-050
gb|BP818970.1|BP818970 BP818970 RAFL19 Arabidopsis thaliana... 110 6e-050
gb|BP817312.1|BP817312 BP817312 RAFL19 Arabidopsis thaliana... 104 1e-049
gb|BP859845.1|BP859845 BP859845 RAFL21 Arabidopsis thaliana... 198 1e-049
gb|BP573142.1|BP573142 BP573142 RAFL14 Arabidopsis thaliana... 174 5e-049
gb|AV802292.1|AV802292 AV802292 RAFL9 Arabidopsis thaliana ... 193 3e-048
gb|R65493.1|R65493 13997 Lambda-PRL2 Arabidopsis thaliana c... 173 5e-048
gb|BP583990.1|BP583990 BP583990 RAFL14 Arabidopsis thaliana... 192 9e-048
gb|BP587869.1|BP587869 BP587869 RAFL15 Arabidopsis thaliana... 191 2e-047
gb|BP578691.1|BP578691 BP578691 RAFL14 Arabidopsis thaliana... 129 6e-047
gb|BP827596.1|BP827596 BP827596 RAFL19 Arabidopsis thaliana... 146 8e-047
gb|AV534771.1|AV534771 AV534771 Arabidopsis thaliana flower... 188 1e-046
gb|BP848699.1|BP848699 BP848699 RAFL21 Arabidopsis thaliana... 175 2e-046
gb|BP791848.1|BP791848 BP791848 RAFL7 Arabidopsis thaliana ... 186 6e-046
gb|BP591211.1|BP591211 BP591211 RAFL15 Arabidopsis thaliana... 186 8e-046
gb|AV787800.1|AV787800 AV787800 RAFL6 Arabidopsis thaliana ... 185 1e-045
gb|AV786750.1|AV786750 AV786750 RAFL6 Arabidopsis thaliana ... 184 3e-045
gb|T22824.1|T22824 4832 Lambda-PRL2 Arabidopsis thaliana cD... 182 7e-045
gb|BP666687.1|BP666687 BP666687 RAFL21 Arabidopsis thaliana... 181 2e-044
gb|BP588245.1|BP588245 BP588245 RAFL15 Arabidopsis thaliana... 178 1e-043
gb|BP585521.1|BP585521 BP585521 RAFL15 Arabidopsis thaliana... 155 6e-043
gb|CB262134.1|CB262134 73-E8879-008-014-A20-pBl2 MPIZ-ADIS-... 148 6e-043
gb|BP841891.1|BP841891 BP841891 RAFL21 Arabidopsis thaliana... 175 1e-042
gb|BP574037.1|BP574037 BP574037 RAFL14 Arabidopsis thaliana... 175 2e-042
gb|BP645173.1|BP645173 BP645173 RAFL19 Arabidopsis thaliana... 175 2e-042
gb|BP571598.1|BP571598 BP571598 RAFL14 Arabidopsis thaliana... 108 2e-042
gb|T42519.1|T42519 5782 Lambda-PRL2 Arabidopsis thaliana cD... 168 1e-040
gb|BP817736.1|BP817736 BP817736 RAFL19 Arabidopsis thaliana... 168 1e-040
gb|AV801846.1|AV801846 AV801846 RAFL9 Arabidopsis thaliana ... 105 4e-039
gb|BP563616.1|BP563616 BP563616 RAFL14 Arabidopsis thaliana... 156 5e-039
gb|BP624419.1|BP624419 BP624419 RAFL17 Arabidopsis thaliana... 163 6e-039
gb|BP796554.1|BP796554 BP796554 RAFL5 Arabidopsis thaliana ... 162 8e-039
gb|AV787052.1|AV787052 AV787052 RAFL6 Arabidopsis thaliana ... 134 2e-037
gb|BP780606.1|BP780606 BP780606 RAFL7 Arabidopsis thaliana ... 158 2e-037
dbj|AB019223.1| Arabidopsis thaliana genomic DNA, chromosom... 141 4e-037
gb|BP865926.1|BP865926 BP865926 RAFL21 Arabidopsis thaliana... 155 1e-036
gb|BP632572.1|BP632572 BP632572 RAFL17 Arabidopsis thaliana... 134 1e-036
gb|BP666814.1|BP666814 BP666814 RAFL21 Arabidopsis thaliana... 155 1e-036
gb|BP622441.1|BP622441 BP622441 RAFL17 Arabidopsis thaliana... 155 2e-036
gb|BP566544.1|BP566544 BP566544 RAFL14 Arabidopsis thaliana... 154 3e-036
gb|BP662964.1|BP662964 BP662964 RAFL21 Arabidopsis thaliana... 153 5e-036
gb|BP649128.1|BP649128 BP649128 RAFL19 Arabidopsis thaliana... 152 1e-035
gb|BP644002.1|BP644002 BP644002 RAFL19 Arabidopsis thaliana... 136 5e-035
gb|BP654761.1|BP654761 BP654761 RAFL19 Arabidopsis thaliana... 149 8e-035
gb|BP854497.1|BP854497 BP854497 RAFL21 Arabidopsis thaliana... 148 2e-034
gb|AV806261.1|AV806261 AV806261 RAFL9 Arabidopsis thaliana ... 148 2e-034
gb|BP659246.1|BP659246 BP659246 RAFL19 Arabidopsis thaliana... 147 4e-034
gb|BP652533.1|BP652533 BP652533 RAFL19 Arabidopsis thaliana... 145 1e-033
gb|BP654949.1|BP654949 BP654949 RAFL19 Arabidopsis thaliana... 145 1e-033
gb|BP613996.1|BP613996 BP613996 RAFL16 Arabidopsis thaliana... 142 1e-032
gb|BP655915.1|BP655915 BP655915 RAFL19 Arabidopsis thaliana... 93 3e-032
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 141 3e-032
gb|AV786726.1|AV786726 AV786726 RAFL6 Arabidopsis thaliana ... 140 3e-032
gb|BP625240.1|BP625240 BP625240 RAFL17 Arabidopsis thaliana... 80 9e-032
gb|BP811694.1|BP811694 BP811694 RAFL19 Arabidopsis thaliana... 81 2e-031
gb|BP867885.1|BP867885 BP867885 RAFL21 Arabidopsis thaliana... 98 2e-031
gb|CL495655.1|CL495655 SAIL_614_B02.v2 SAIL Collection Arab... 133 6e-030
gb|BP576270.1|BP576270 BP576270 RAFL14 Arabidopsis thaliana... 94 7e-030
gb|T88432.1|T88432 12128 Lambda-PRL2 Arabidopsis thaliana c... 111 5e-029
gb|BP629325.1|BP629325 BP629325 RAFL17 Arabidopsis thaliana... 128 2e-028
gb|BP578736.1|BP578736 BP578736 RAFL14 Arabidopsis thaliana... 61 4e-028
gb|BP833579.1|BP833579 BP833579 RAFL19 Arabidopsis thaliana... 61 1e-027
gb|BP651889.1|BP651889 BP651889 RAFL19 Arabidopsis thaliana... 92 4e-027
gb|BP638611.1|BP638611 BP638611 RAFL19 Arabidopsis thaliana... 114 3e-024
gb|BP600239.1|BP600239 BP600239 RAFL16 Arabidopsis thaliana... 91 5e-024
gb|BP621953.1|BP621953 BP621953 RAFL17 Arabidopsis thaliana... 90 3e-023
gb|BP661036.1|BP661036 BP661036 RAFL21 Arabidopsis thaliana... 107 4e-022
gb|BP627549.1|BP627549 BP627549 RAFL17 Arabidopsis thaliana... 93 1e-021
gb|AV522004.1|AV522004 AV522004 Arabidopsis thaliana aboveg... 102 1e-020
>gb|AY052193.1| Arabidopsis thaliana AT5g46430/K11I1_2 mRNA, complete cds
Length = 609
Score = 272 bits (589), Expect = 7e-072
Identities = 112/141 (79%), Positives = 125/141 (88%)
Frame = +2 / +2
Query: 41 HHRRFAKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLM 220
+HRR KMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLM
Sbjct: 29 NHRRGVKMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLM 208
Query: 221 PNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERA 400
PN+GYGSDKKTRHYLPN FKKF+VHN SELELL+MHNRTYCAEIAHN+ST+KRK IVERA
Sbjct: 209 PNVGYGSDKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERA 388
Query: 401 AQLDIVVTNKLARLRSQEDE* 463
+QLD+VV+NKL RLRSQEDE*
Sbjct: 389 SQLDVVVSNKLGRLRSQEDE* 451
Score = 115 bits (245), Expect = 2e-024
Identities = 66/139 (47%), Positives = 72/139 (51%)
Frame = -2 / -1
Query: 465 FHXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCIXXXXXSEXXXXX 286
FH L TT SS A ST++ V+ L AISAQ*VLLCI SE
Sbjct: 453 FHSSSWLRNLPSLLETTTSS*EALSTMAFLFFVEIL*AISAQ*VLLCIMSSSSSEVL*TM 274
Query: 285 XXXXXLGR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCL 106
GR* VFLS+P P LGIKV PLN LTRESIP WGL+N
Sbjct: 273 NFLNPFGR*WRVFLSDP*PTLGIKVTPLNFLLTRESIPLGLLQLSLTVILRSLWGLMNLA 94
Query: 105 TLFFTIFCVSSGTAIFANL 49
LFFT F VS+GTAIF L
Sbjct: 93 DLFFTTFFVSNGTAIFTPL 37
Score = 108 bits (231), Expect = 2e-022
Identities = 51/118 (43%), Positives = 76/118 (64%)
Frame = -1 / -3
Query: 475 LLNISLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDI 296
LL +SLV LA +P +LVG+++V LRS+LH L+L +V +L VSPVVH + L+L +
Sbjct: 463 LLGLSLVFLATQPTKLVGNNNV*LRSSLHYGLSLLC*DIVSNLCTVSPVVHHE*LELRGV 284
Query: 295 VNNKLFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
VNN+L E +++++GHQG +LEL+ GV+TL P PA+L A+ +G
Sbjct: 283 VNNELLESIWEVVAGLLIRSVTNIGHQGDTLELSSHPGVNTLRPPPAFLDGDSAITLG 110
>ref|NM_124013.2| Arabidopsis thaliana structural constituent of ribosome AT5G46430
transcript variant AT5G46430.2 mRNA, complete cds
Length = 606
Score = 272 bits (589), Expect = 7e-072
Identities = 112/141 (79%), Positives = 125/141 (88%)
Frame = +2 / +2
Query: 41 HHRRFAKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLM 220
+HRR KMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLM
Sbjct: 29 NHRRGVKMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLM 208
Query: 221 PNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERA 400
PN+GYGSDKKTRHYLPN FKKF+VHN SELELL+MHNRTYCAEIAHN+ST+KRK IVERA
Sbjct: 209 PNVGYGSDKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERA 388
Query: 401 AQLDIVVTNKLARLRSQEDE* 463
+QLD+VV+NKL RLRSQEDE*
Sbjct: 389 SQLDVVVSNKLGRLRSQEDE* 451
Score = 115 bits (245), Expect = 2e-024
Identities = 66/139 (47%), Positives = 72/139 (51%)
Frame = -2 / -1
Query: 465 FHXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCIXXXXXSEXXXXX 286
FH L TT SS A ST++ V+ L AISAQ*VLLCI SE
Sbjct: 453 FHSSSWLRNLPSLLETTTSS*EALSTMAFLFFVEIL*AISAQ*VLLCIMSSSSSEVL*TM 274
Query: 285 XXXXXLGR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCL 106
GR* VFLS+P P LGIKV PLN LTRESIP WGL+N
Sbjct: 273 NFLNPFGR*WRVFLSDP*PTLGIKVTPLNFLLTRESIPLGLLQLSLTVILRSLWGLMNLA 94
Query: 105 TLFFTIFCVSSGTAIFANL 49
LFFT F VS+GTAIF L
Sbjct: 93 DLFFTTFFVSNGTAIFTPL 37
Score = 108 bits (231), Expect = 2e-022
Identities = 51/118 (43%), Positives = 76/118 (64%)
Frame = -1 / -3
Query: 475 LLNISLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDI 296
LL +SLV LA +P +LVG+++V LRS+LH L+L +V +L VSPVVH + L+L +
Sbjct: 463 LLGLSLVFLATQPTKLVGNNNV*LRSSLHYGLSLLC*DIVSNLCTVSPVVHHE*LELRGV 284
Query: 295 VNNKLFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
VNN+L E +++++GHQG +LEL+ GV+TL P PA+L A+ +G
Sbjct: 283 VNNELLESIWEVVAGLLIRSVTNIGHQGDTLELSSHPGVNTLRPPPAFLDGDSAITLG 110
>gb|CB264390.1|CB264390 66-E015022-035-004-C18-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000C184Q 5-PRIME, mRNA sequence
Length = 609
Score = 270 bits (584), Expect = 3e-071
Identities = 113/136 (83%), Positives = 123/136 (90%)
Frame = +2 / +3
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
AKMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 18 AKMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 197
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDI 415
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QLD+
Sbjct: 198 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDV 377
Query: 416 VVTNKLARLRSQEDE* 463
VVTN+LARLRSQEDE*
Sbjct: 378 VVTNRLARLRSQEDE* 425
Score = 106 bits (226), Expect = 8e-022
Identities = 49/114 (42%), Positives = 71/114 (62%)
Frame = -1 / -2
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 425 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 246
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
E +++++GHQ + EL+ ++TL P PA+L V +G
Sbjct: 245 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFLDGDSTVTLG 84
Score = 83.5 bits (176), Expect(2) = 6e-022
Identities = 40/72 (55%), Positives = 44/72 (61%)
Frame = -2 / -3
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT
Sbjct: 229 GR**RVFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTT 50
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 49 FLVSNGTAIFAS 14
Score = 42.8 bits (87), Expect(2) = 6e-022
Identities = 25/47 (53%), Positives = 27/47 (57%)
Frame = -2 / -3
Query: 462 HXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCI 322
H LVTT SS A STI+ V+TL AISAQ*VLLCI
Sbjct: 424 HSSSWLRSLASLLVTTTSS*EALSTIAFLFLVETL*AISAQ*VLLCI 284
>gb|CF652437.1|CF652437 55-L020524-066-003-M14-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001M143Q 5-PRIME, mRNA sequence
Length = 656
Score = 270 bits (584), Expect = 3e-071
Identities = 113/136 (83%), Positives = 123/136 (90%)
Frame = +2 / +2
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
AKMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 23 AKMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 202
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDI 415
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QLD+
Sbjct: 203 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDV 382
Query: 416 VVTNKLARLRSQEDE* 463
VVTN+LARLRSQEDE*
Sbjct: 383 VVTNRLARLRSQEDE* 430
Score = 106 bits (226), Expect = 8e-022
Identities = 49/114 (42%), Positives = 71/114 (62%)
Frame = -1 / -2
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 430 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 251
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
E +++++GHQ + EL+ ++TL P PA+L V +G
Sbjct: 250 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFLDGDSTVTLG 89
Score = 83.5 bits (176), Expect(2) = 6e-022
Identities = 40/72 (55%), Positives = 44/72 (61%)
Frame = -2 / -3
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT
Sbjct: 234 GR**RVFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTT 55
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 54 FLVSNGTAIFAS 19
Score = 42.8 bits (87), Expect(2) = 6e-022
Identities = 25/47 (53%), Positives = 27/47 (57%)
Frame = -2 / -3
Query: 462 HXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCI 322
H LVTT SS A STI+ V+TL AISAQ*VLLCI
Sbjct: 429 HSSSWLRSLASLLVTTTSS*EALSTIAFLFLVETL*AISAQ*VLLCI 289
>gb|AY086736.1| Arabidopsis thaliana clone 271605 mRNA, complete sequence
Length = 643
Score = 269 bits (581), Expect = 8e-071
Identities = 112/136 (82%), Positives = 123/136 (90%)
Frame = +2 / +3
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
AKMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSR+RRKFKG TLMPN+GY
Sbjct: 63 AKMAVPLLTKKVVKKRSTKFIRPQSDRRITVKESWRRPKGIDSRMRRKFKGVTLMPNVGY 242
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDI 415
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QLD+
Sbjct: 243 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDV 422
Query: 416 VVTNKLARLRSQEDE* 463
VVTN+LARLRSQEDE*
Sbjct: 423 VVTNRLARLRSQEDE* 470
Score = 106 bits (226), Expect = 8e-022
Identities = 49/114 (42%), Positives = 71/114 (62%)
Frame = -1 / -3
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 470 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 291
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
E +++++GHQ + EL+ ++TL P PA+L V +G
Sbjct: 290 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFLDGDSTVTLG 129
Score = 81.7 bits (172), Expect(2) = 2e-021
Identities = 39/72 (54%), Positives = 44/72 (61%)
Frame = -2 / -1
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN L ESIP WGL+N + LFFT
Sbjct: 274 GR**RVFLSDP*PTLGIKVTPLNFLLILESIPFGLLQLSLTVILRSLWGLMNLVDLFFTT 95
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 94 FLVSNGTAIFAS 59
Score = 42.8 bits (87), Expect(2) = 2e-021
Identities = 25/47 (53%), Positives = 27/47 (57%)
Frame = -2 / -1
Query: 462 HXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCI 322
H LVTT SS A STI+ V+TL AISAQ*VLLCI
Sbjct: 469 HSSSWLRSLASLLVTTTSS*EALSTIAFLFLVETL*AISAQ*VLLCI 329
>gb|AV828561.1|AV828561 AV828561 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-29-M11 5',
mRNA sequence
Length = 579
Score = 268 bits (579), Expect = 2e-070
Identities = 112/136 (82%), Positives = 122/136 (89%)
Frame = +2 / +2
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 38 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 217
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDI 415
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QLD+
Sbjct: 218 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDV 397
Query: 416 VVTNKLARLRSQEDE* 463
VVTN+LARLRSQEDE*
Sbjct: 398 VVTNRLARLRSQEDE* 445
Score = 106 bits (226), Expect = 8e-022
Identities = 49/114 (42%), Positives = 71/114 (62%)
Frame = -1 / -3
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 445 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 266
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
E +++++GHQ + EL+ ++TL P PA+L V +G
Sbjct: 265 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFLDGDSTVTLG 104
Score = 83.5 bits (176), Expect(2) = 6e-022
Identities = 40/72 (55%), Positives = 44/72 (61%)
Frame = -2 / -1
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT
Sbjct: 249 GR**RVFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTT 70
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 69 FLVSNGTAIFAS 34
Score = 42.8 bits (87), Expect(2) = 6e-022
Identities = 25/47 (53%), Positives = 27/47 (57%)
Frame = -2 / -1
Query: 462 HXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCI 322
H LVTT SS A STI+ V+TL AISAQ*VLLCI
Sbjct: 444 HSSSWLRSLASLLVTTTSS*EALSTIAFLFLVETL*AISAQ*VLLCI 304
>gb|CK118688.1|CK118688 216h22.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H22216
5-PRIME, mRNA sequence
Length = 562
Score = 268 bits (579), Expect = 2e-070
Identities = 112/136 (82%), Positives = 122/136 (89%)
Frame = +2 / +3
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 18 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 197
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDI 415
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QLD+
Sbjct: 198 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDV 377
Query: 416 VVTNKLARLRSQEDE* 463
VVTN+LARLRSQEDE*
Sbjct: 378 VVTNRLARLRSQEDE* 425
Score = 106 bits (226), Expect = 8e-022
Identities = 49/114 (42%), Positives = 71/114 (62%)
Frame = -1 / -3
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 425 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 246
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
E +++++GHQ + EL+ ++TL P PA+L V +G
Sbjct: 245 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFLDGDSTVTLG 84
Score = 83.5 bits (176), Expect(2) = 6e-022
Identities = 40/72 (55%), Positives = 44/72 (61%)
Frame = -2 / -1
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT
Sbjct: 229 GR**RVFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTT 50
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 49 FLVSNGTAIFAS 14
Score = 42.8 bits (87), Expect(2) = 6e-022
Identities = 25/47 (53%), Positives = 27/47 (57%)
Frame = -2 / -1
Query: 462 HXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCI 322
H LVTT SS A STI+ V+TL AISAQ*VLLCI
Sbjct: 424 HSSSWLRSLASLLVTTTSS*EALSTIAFLFLVETL*AISAQ*VLLCI 284
>gb|CK118706.1|CK118706 216e01.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011E01216
5-PRIME, mRNA sequence
Length = 447
Score = 268 bits (579), Expect = 2e-070
Identities = 112/136 (82%), Positives = 122/136 (89%)
Frame = +2 / +3
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
AKMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 18 AKMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 197
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDI 415
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QLD+
Sbjct: 198 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDV 377
Query: 416 VVTNKLARLRSQEDE* 463
V TN+LARLRSQEDE*
Sbjct: 378 VXTNRLARLRSQEDE* 425
Score = 105 bits (224), Expect = 1e-021
Identities = 49/114 (42%), Positives = 70/114 (61%)
Frame = -1 / -2
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG ++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 425 SLVFLATEPSKPVGXNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 246
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
E +++++GHQ + EL+ ++TL P PA+L V +G
Sbjct: 245 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFLDGDSTVTLG 84
Score = 83.5 bits (176), Expect(2) = 3e-021
Identities = 40/72 (55%), Positives = 44/72 (61%)
Frame = -2 / -3
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT
Sbjct: 229 GR**RVFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTT 50
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 49 FLVSNGTAIFAS 14
Score = 40.5 bits (82), Expect(2) = 3e-021
Identities = 24/47 (51%), Positives = 26/47 (55%)
Frame = -2 / -3
Query: 462 HXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCI 322
H LV T SS A STI+ V+TL AISAQ*VLLCI
Sbjct: 424 HSSSWLRSLASLLVXTTSS*EALSTIAFLFLVETL*AISAQ*VLLCI 284
>gb|AY057566.1| Arabidopsis thaliana AT4g18100/F15J5_70 mRNA, complete cds
Length = 648
Score = 268 bits (579), Expect = 2e-070
Identities = 112/136 (82%), Positives = 122/136 (89%)
Frame = +2 / +1
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 37 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 216
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDI 415
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QLD+
Sbjct: 217 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDV 396
Query: 416 VVTNKLARLRSQEDE* 463
VVTN+LARLRSQEDE*
Sbjct: 397 VVTNRLARLRSQEDE* 444
Score = 106 bits (226), Expect = 8e-022
Identities = 49/114 (42%), Positives = 71/114 (62%)
Frame = -1 / -1
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 444 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 265
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
E +++++GHQ + EL+ ++TL P PA+L V +G
Sbjct: 264 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFLDGDSTVTLG 103
Score = 83.5 bits (176), Expect(2) = 6e-022
Identities = 40/72 (55%), Positives = 44/72 (61%)
Frame = -2 / -2
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT
Sbjct: 248 GR**RVFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTT 69
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 68 FLVSNGTAIFAS 33
Score = 42.8 bits (87), Expect(2) = 6e-022
Identities = 25/47 (53%), Positives = 27/47 (57%)
Frame = -2 / -2
Query: 462 HXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCI 322
H LVTT SS A STI+ V+TL AISAQ*VLLCI
Sbjct: 443 HSSSWLRSLASLLVTTTSS*EALSTIAFLFLVETL*AISAQ*VLLCI 303
>gb|AY072399.1| Arabidopsis thaliana ribosomal protein L32 -like protein
(At4g18100) mRNA, complete cds
Length = 592
Score = 268 bits (579), Expect = 2e-070
Identities = 112/136 (82%), Positives = 122/136 (89%)
Frame = +2 / +1
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 37 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 216
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDI 415
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QLD+
Sbjct: 217 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDV 396
Query: 416 VVTNKLARLRSQEDE* 463
VVTN+LARLRSQEDE*
Sbjct: 397 VVTNRLARLRSQEDE* 444
Score = 106 bits (226), Expect = 8e-022
Identities = 49/114 (42%), Positives = 71/114 (62%)
Frame = -1 / -2
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 444 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 265
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
E +++++GHQ + EL+ ++TL P PA+L V +G
Sbjct: 264 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFLDGDSTVTLG 103
Score = 83.5 bits (176), Expect(2) = 6e-022
Identities = 40/72 (55%), Positives = 44/72 (61%)
Frame = -2 / -3
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT
Sbjct: 248 GR**RVFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTT 69
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 68 FLVSNGTAIFAS 33
Score = 42.8 bits (87), Expect(2) = 6e-022
Identities = 25/47 (53%), Positives = 27/47 (57%)
Frame = -2 / -3
Query: 462 HXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCI 322
H LVTT SS A STI+ V+TL AISAQ*VLLCI
Sbjct: 443 HSSSWLRSLASLLVTTTSS*EALSTIAFLFLVETL*AISAQ*VLLCI 303
>ref|NM_117920.2| Arabidopsis thaliana structural constituent of ribosome AT4G18100
mRNA, complete cds
Length = 697
Score = 268 bits (579), Expect = 2e-070
Identities = 112/136 (82%), Positives = 122/136 (89%)
Frame = +2 / +3
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 60 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 239
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDI 415
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QLD+
Sbjct: 240 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDV 419
Query: 416 VVTNKLARLRSQEDE* 463
VVTN+LARLRSQEDE*
Sbjct: 420 VVTNRLARLRSQEDE* 467
Score = 106 bits (226), Expect = 8e-022
Identities = 49/114 (42%), Positives = 71/114 (62%)
Frame = -1 / -3
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 467 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 288
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
E +++++GHQ + EL+ ++TL P PA+L V +G
Sbjct: 287 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFLDGDSTVTLG 126
Score = 83.5 bits (176), Expect(2) = 6e-022
Identities = 40/72 (55%), Positives = 44/72 (61%)
Frame = -2 / -1
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT
Sbjct: 271 GR**RVFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTT 92
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 91 FLVSNGTAIFAS 56
Score = 42.8 bits (87), Expect(2) = 6e-022
Identities = 25/47 (53%), Positives = 27/47 (57%)
Frame = -2 / -1
Query: 462 HXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCI 322
H LVTT SS A STI+ V+TL AISAQ*VLLCI
Sbjct: 466 HSSSWLRSLASLLVTTTSS*EALSTIAFLFLVETL*AISAQ*VLLCI 326
>gb|CB264066.1|CB264066 95-E013840-035-001-M23-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000M231Q 5-PRIME, mRNA sequence
Length = 509
Score = 266 bits (575), Expect = 6e-070
Identities = 110/138 (79%), Positives = 122/138 (88%)
Frame = +2 / +2
Query: 50 RFAKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNI 229
R KMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+
Sbjct: 17 RGVKMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNV 196
Query: 230 GYGSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQL 409
GYGSDKKTRHYLPN FKKF+VHN SELELL+MHNRTYCAEIAHN+ST+KRK IVERA+QL
Sbjct: 197 GYGSDKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQL 376
Query: 410 DIVVTNKLARLRSQEDE* 463
D+VV+NKL RLRSQEDE*
Sbjct: 377 DVVVSNKLGRLRSQEDE* 430
Score = 115 bits (245), Expect = 2e-024
Identities = 66/139 (47%), Positives = 72/139 (51%)
Frame = -2 / -3
Query: 465 FHXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCIXXXXXSEXXXXX 286
FH L TT SS A ST++ V+ L AISAQ*VLLCI SE
Sbjct: 432 FHSSSWLRNLPSLLETTTSS*EALSTMAFLFFVEIL*AISAQ*VLLCIMSSSSSEVL*TM 253
Query: 285 XXXXXLGR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCL 106
GR* VFLS+P P LGIKV PLN LTRESIP WGL+N
Sbjct: 252 NFLNPFGR*WRVFLSDP*PTLGIKVTPLNFLLTRESIPLGLLQLSLTVILRSLWGLMNLA 73
Query: 105 TLFFTIFCVSSGTAIFANL 49
LFFT F VS+GTAIF L
Sbjct: 72 DLFFTTFFVSNGTAIFTPL 16
Score = 108 bits (231), Expect = 2e-022
Identities = 51/118 (43%), Positives = 76/118 (64%)
Frame = -1 / -2
Query: 475 LLNISLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDI 296
LL +SLV LA +P +LVG+++V LRS+LH L+L +V +L VSPVVH + L+L +
Sbjct: 442 LLGLSLVFLATQPTKLVGNNNV*LRSSLHYGLSLLC*DIVSNLCTVSPVVHHE*LELRGV 263
Query: 295 VNNKLFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
VNN+L E +++++GHQG +LEL+ GV+TL P PA+L A+ +G
Sbjct: 262 VNNELLESIWEVVAGLLIRSVTNIGHQGDTLELSSHPGVNTLRPPPAFLDGDSAITLG 89
>gb|BT000235.1| Arabidopsis thaliana ribosomal protein L32 -like protein
(At4g18100) mRNA, complete cds
Length = 458
Score = 266 bits (575), Expect = 6e-070
Identities = 111/134 (82%), Positives = 121/134 (90%)
Frame = +2 / +1
Query: 62 MAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 241
MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GYGS
Sbjct: 1 MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 180
Query: 242 DKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIVV 421
DKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QLD+VV
Sbjct: 181 DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 360
Query: 422 TNKLARLRSQEDE* 463
TN+LARLRSQEDE*
Sbjct: 361 TNRLARLRSQEDE* 402
Score = 106 bits (226), Expect = 8e-022
Identities = 49/114 (42%), Positives = 71/114 (62%)
Frame = -1 / -3
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 402 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 223
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
E +++++GHQ + EL+ ++TL P PA+L V +G
Sbjct: 222 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFLDGDSTVTLG 61
>emb|BX828680.1|CNS0A3L6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL29ZE01 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 528
Score = 266 bits (575), Expect = 6e-070
Identities = 111/136 (81%), Positives = 121/136 (88%)
Frame = +2 / +2
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 14 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 193
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDI 415
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVER +QLD+
Sbjct: 194 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERTSQLDV 373
Query: 416 VVTNKLARLRSQEDE* 463
VVTN+LARLRSQEDE*
Sbjct: 374 VVTNRLARLRSQEDE* 421
Score = 106 bits (226), Expect = 8e-022
Identities = 49/114 (42%), Positives = 71/114 (62%)
Frame = -1 / -3
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 421 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 242
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
E +++++GHQ + EL+ ++TL P PA+L V +G
Sbjct: 241 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFLDGDSTVTLG 80
Score = 83.5 bits (176), Expect(2) = 2e-021
Identities = 40/72 (55%), Positives = 44/72 (61%)
Frame = -2 / -1
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT
Sbjct: 225 GR**RVFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTT 46
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 45 FLVSNGTAIFAS 10
Score = 40.9 bits (83), Expect(2) = 2e-021
Identities = 24/47 (51%), Positives = 26/47 (55%)
Frame = -2 / -1
Query: 462 HXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCI 322
H LVTT SS STI+ V+TL AISAQ*VLLCI
Sbjct: 420 HSSSWLRSLASLLVTTTSS*EVLSTIAFLFLVETL*AISAQ*VLLCI 280
>gb|AV821743.1|AV821743 AV821743 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-15-O08 5',
mRNA sequence
Length = 602
Score = 265 bits (573), Expect = 1e-069
Identities = 109/135 (80%), Positives = 121/135 (89%)
Frame = +2 / +2
Query: 59 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 238
KMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GYG
Sbjct: 41 KMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYG 220
Query: 239 SDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIV 418
SDKKTRHYLPN FKKF+VHN SELELL+MHNRTYCAEIAHN+ST+KRK IVERA+QLD+V
Sbjct: 221 SDKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVV 400
Query: 419 VTNKLARLRSQEDE* 463
V+NKL RLRSQEDE*
Sbjct: 401 VSNKLGRLRSQEDE* 445
Score = 114 bits (243), Expect = 3e-024
Identities = 65/136 (47%), Positives = 71/136 (52%)
Frame = -2 / -3
Query: 465 FHXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCIXXXXXSEXXXXX 286
FH L TT SS A ST++ V+ L AISAQ*VLLCI SE
Sbjct: 447 FHSSSWLRNLPSLLETTTSS*EALSTMAFLFFVEIL*AISAQ*VLLCIMSSSSSEVL*TM 268
Query: 285 XXXXXLGR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCL 106
GR* VFLS+P P LGIKV PLN LTRESIP WGL+N
Sbjct: 267 NFLNPFGR*WRVFLSDP*PTLGIKVTPLNFLLTRESIPLGLLQLSLTVILRSLWGLMNLA 88
Query: 105 TLFFTIFCVSSGTAIF 58
LFFT F VS+GTAIF
Sbjct: 87 DLFFTTFFVSNGTAIF 40
Score = 108 bits (231), Expect = 2e-022
Identities = 51/118 (43%), Positives = 76/118 (64%)
Frame = -1 / -2
Query: 475 LLNISLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDI 296
LL +SLV LA +P +LVG+++V LRS+LH L+L +V +L VSPVVH + L+L +
Sbjct: 457 LLGLSLVFLATQPTKLVGNNNV*LRSSLHYGLSLLC*DIVSNLCTVSPVVHHE*LELRGV 278
Query: 295 VNNKLFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
VNN+L E +++++GHQG +LEL+ GV+TL P PA+L A+ +G
Sbjct: 277 VNNELLESIWEVVAGLLIRSVTNIGHQGDTLELSSHPGVNTLRPPPAFLDGDSAITLG 104
>gb|AY042872.1| Arabidopsis thaliana ribosomal protein L32 (K11I1.2) mRNA, complete
cds
Length = 602
Score = 265 bits (573), Expect = 1e-069
Identities = 109/135 (80%), Positives = 121/135 (89%)
Frame = +2 / +1
Query: 59 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 238
KMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GYG
Sbjct: 43 KMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYG 222
Query: 239 SDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIV 418
SDKKTRHYLPN FKKF+VHN SELELL+MHNRTYCAEIAHN+ST+KRK IVERA+QLD+V
Sbjct: 223 SDKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVV 402
Query: 419 VTNKLARLRSQEDE* 463
V+NKL RLRSQEDE*
Sbjct: 403 VSNKLGRLRSQEDE* 447
Score = 114 bits (243), Expect = 3e-024
Identities = 65/136 (47%), Positives = 71/136 (52%)
Frame = -2 / -1
Query: 465 FHXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCIXXXXXSEXXXXX 286
FH L TT SS A ST++ V+ L AISAQ*VLLCI SE
Sbjct: 449 FHSSSWLRNLPSLLETTTSS*EALSTMAFLFFVEIL*AISAQ*VLLCIMSSSSSEVL*TM 270
Query: 285 XXXXXLGR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCL 106
GR* VFLS+P P LGIKV PLN LTRESIP WGL+N
Sbjct: 269 NFLNPFGR*WRVFLSDP*PTLGIKVTPLNFLLTRESIPLGLLQLSLTVILRSLWGLMNLA 90
Query: 105 TLFFTIFCVSSGTAIF 58
LFFT F VS+GTAIF
Sbjct: 89 DLFFTTFFVSNGTAIF 42
Score = 108 bits (231), Expect = 2e-022
Identities = 51/118 (43%), Positives = 76/118 (64%)
Frame = -1 / -3
Query: 475 LLNISLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDI 296
LL +SLV LA +P +LVG+++V LRS+LH L+L +V +L VSPVVH + L+L +
Sbjct: 459 LLGLSLVFLATQPTKLVGNNNV*LRSSLHYGLSLLC*DIVSNLCTVSPVVHHE*LELRGV 280
Query: 295 VNNKLFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
VNN+L E +++++GHQG +LEL+ GV+TL P PA+L A+ +G
Sbjct: 279 VNNELLESIWEVVAGLLIRSVTNIGHQGDTLELSSHPGVNTLRPPPAFLDGDSAITLG 106
>ref|NM_180811.1| Arabidopsis thaliana structural constituent of ribosome AT5G46430
transcript variant AT5G46430.1 mRNA, complete cds
Length = 602
Score = 265 bits (573), Expect = 1e-069
Identities = 109/135 (80%), Positives = 121/135 (89%)
Frame = +2 / +1
Query: 59 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 238
KMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GYG
Sbjct: 43 KMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYG 222
Query: 239 SDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIV 418
SDKKTRHYLPN FKKF+VHN SELELL+MHNRTYCAEIAHN+ST+KRK IVERA+QLD+V
Sbjct: 223 SDKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVV 402
Query: 419 VTNKLARLRSQEDE* 463
V+NKL RLRSQEDE*
Sbjct: 403 VSNKLGRLRSQEDE* 447
Score = 114 bits (243), Expect = 3e-024
Identities = 65/136 (47%), Positives = 71/136 (52%)
Frame = -2 / -1
Query: 465 FHXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCIXXXXXSEXXXXX 286
FH L TT SS A ST++ V+ L AISAQ*VLLCI SE
Sbjct: 449 FHSSSWLRNLPSLLETTTSS*EALSTMAFLFFVEIL*AISAQ*VLLCIMSSSSSEVL*TM 270
Query: 285 XXXXXLGR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCL 106
GR* VFLS+P P LGIKV PLN LTRESIP WGL+N
Sbjct: 269 NFLNPFGR*WRVFLSDP*PTLGIKVTPLNFLLTRESIPLGLLQLSLTVILRSLWGLMNLA 90
Query: 105 TLFFTIFCVSSGTAIF 58
LFFT F VS+GTAIF
Sbjct: 89 DLFFTTFFVSNGTAIF 42
Score = 108 bits (231), Expect = 2e-022
Identities = 51/118 (43%), Positives = 76/118 (64%)
Frame = -1 / -3
Query: 475 LLNISLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDI 296
LL +SLV LA +P +LVG+++V LRS+LH L+L +V +L VSPVVH + L+L +
Sbjct: 459 LLGLSLVFLATQPTKLVGNNNV*LRSSLHYGLSLLC*DIVSNLCTVSPVVHHE*LELRGV 280
Query: 295 VNNKLFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
VNN+L E +++++GHQG +LEL+ GV+TL P PA+L A+ +G
Sbjct: 279 VNNELLESIWEVVAGLLIRSVTNIGHQGDTLELSSHPGVNTLRPPPAFLDGDSAITLG 106
>gb|AV829601.1|AV829601 AV829601 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-48-M12 5',
mRNA sequence
Length = 482
Score = 264 bits (572), Expect = 1e-069
Identities = 111/136 (81%), Positives = 120/136 (88%)
Frame = +2 / +3
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 39 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 218
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDI 415
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNV T KRK IVERA+QLD+
Sbjct: 219 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVXTXKRKAIVERASQLDV 398
Query: 416 VVTNKLARLRSQEDE* 463
VVTN+LARLRSQEDE*
Sbjct: 399 VVTNRLARLRSQEDE* 446
Score = 83.5 bits (176), Expect(2) = 2e-021
Identities = 40/72 (55%), Positives = 44/72 (61%)
Frame = -2 / -2
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT
Sbjct: 250 GR**RVFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTT 71
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 70 FLVSNGTAIFAS 35
Score = 40.9 bits (83), Expect(2) = 2e-021
Identities = 25/47 (53%), Positives = 26/47 (55%)
Frame = -2 / -2
Query: 462 HXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCI 322
H LVTT SS A STI+ V TL AISAQ*VLLCI
Sbjct: 445 HSSSWLRSLASLLVTTTSS*EALSTIAFLXLVXTL*AISAQ*VLLCI 305
>gb|BE037666.1|BE037666 AA02E06 AA Arabidopsis thaliana cDNA 5' similar to ribosomal
protein l32-like protein, mRNA sequence
Length = 571
Score = 264 bits (570), Expect = 3e-069
Identities = 110/136 (80%), Positives = 120/136 (88%)
Frame = +2 / +1
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VK R +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 25 ANMAVPLLTKKVVKNRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 204
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDI 415
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QLD+
Sbjct: 205 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDV 384
Query: 416 VVTNKLARLRSQEDE* 463
VTN+LARLRSQEDE*
Sbjct: 385 AVTNRLARLRSQEDE* 432
Score = 105 bits (224), Expect = 1e-021
Identities = 49/114 (42%), Positives = 70/114 (61%)
Frame = -1 / -2
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+ +V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 432 SLVFLATEPSKPVGNSNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 253
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
E +++++GHQ + EL+ ++TL P PA+L V +G
Sbjct: 252 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFLDGDSTVTLG 91
Score = 83.5 bits (176), Expect(2) = 3e-021
Identities = 40/72 (55%), Positives = 44/72 (61%)
Frame = -2 / -3
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT
Sbjct: 236 GR**RVFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTT 57
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 56 FLVSNGTAIFAS 21
Score = 40.5 bits (82), Expect(2) = 3e-021
Identities = 24/47 (51%), Positives = 26/47 (55%)
Frame = -2 / -3
Query: 462 HXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCI 322
H LVT SS A STI+ V+TL AISAQ*VLLCI
Sbjct: 431 HSSSWLRSLASLLVTATSS*EALSTIAFLFLVETL*AISAQ*VLLCI 291
>gb|AF446871.1|AF446871 Arabidopsis thaliana AT5g46430/K11I1_2 mRNA, complete cds
Length = 402
Score = 263 bits (568), Expect = 5e-069
Identities = 108/134 (80%), Positives = 120/134 (89%)
Frame = +2 / +1
Query: 62 MAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 241
MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GYGS
Sbjct: 1 MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 180
Query: 242 DKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIVV 421
DKKTRHYLPN FKKF+VHN SELELL+MHNRTYCAEIAHN+ST+KRK IVERA+QLD+VV
Sbjct: 181 DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 360
Query: 422 TNKLARLRSQEDE* 463
+NKL RLRSQEDE*
Sbjct: 361 SNKLGRLRSQEDE* 402
Score = 108 bits (231), Expect = 2e-022
Identities = 60/119 (50%), Positives = 66/119 (55%)
Frame = -2 / -2
Query: 420 TTMSSCAARSTISLRLRVDTLWAISAQ*VLLCIXXXXXSEXXXXXXXXXXLGR*CLVFLS 241
TT SS A ST++ V+ L AISAQ*VLLCI SE GR* VFLS
Sbjct: 359 TTTSS*EALSTMAFLFFVEIL*AISAQ*VLLCIMSSSSSEVL*TMNFLNPFGR*WRVFLS 180
Query: 240 EPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTIFCVSSGTA 64
+P P LGIKV PLN LTRESIP WGL+N LFFT F VS+GTA
Sbjct: 179 DP*PTLGIKVTPLNFLLTRESIPLGLLQLSLTVILRSLWGLMNLADLFFTTFFVSNGTA 3
Score = 104 bits (221), Expect = 4e-021
Identities = 49/114 (42%), Positives = 73/114 (64%)
Frame = -1 / -1
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA +P +LVG+++V LRS+LH L+L +V +L VSPVVH + L+L +VNN+
Sbjct: 402 SLVFLATQPTKLVGNNNV*LRSSLHYGLSLLC*DIVSNLCTVSPVVHHE*LELRGVVNNE 223
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
L E +++++GHQG +LEL+ GV+TL P PA+L A+ +G
Sbjct: 222 LLESIWEVVAGLLIRSVTNIGHQGDTLELSSHPGVNTLRPPPAFLDGDSAITLG 61
>gb|BT002551.1| Arabidopsis thaliana ribosomal protein L32 (At5g46430) mRNA,
complete cds
Length = 506
Score = 263 bits (568), Expect = 5e-069
Identities = 108/134 (80%), Positives = 120/134 (89%)
Frame = +2 / +1
Query: 62 MAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 241
MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GYGS
Sbjct: 1 MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 180
Query: 242 DKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIVV 421
DKKTRHYLPN FKKF+VHN SELELL+MHNRTYCAEIAHN+ST+KRK IVERA+QLD+VV
Sbjct: 181 DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 360
Query: 422 TNKLARLRSQEDE* 463
+NKL RLRSQEDE*
Sbjct: 361 SNKLGRLRSQEDE* 402
Score = 109 bits (233), Expect = 8e-023
Identities = 63/134 (47%), Positives = 69/134 (51%)
Frame = -2 / -1
Query: 465 FHXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCIXXXXXSEXXXXX 286
FH L TT SS A ST++ V+ L AISAQ*VLLCI SE
Sbjct: 404 FHSSSWLRNLPSLLETTTSS*EALSTMAFLFFVEIL*AISAQ*VLLCIMSSSSSEVL*TM 225
Query: 285 XXXXXLGR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCL 106
GR* VFLS+P P LGIKV PLN LTRESIP WGL+N
Sbjct: 224 NFLNPFGR*WRVFLSDP*PTLGIKVTPLNFLLTRESIPLGLLQLSLTVILRSLWGLMNLA 45
Query: 105 TLFFTIFCVSSGTA 64
LFFT F VS+GTA
Sbjct: 44 DLFFTTFFVSNGTA 3
Score = 108 bits (231), Expect = 2e-022
Identities = 51/118 (43%), Positives = 76/118 (64%)
Frame = -1 / -3
Query: 475 LLNISLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDI 296
LL +SLV LA +P +LVG+++V LRS+LH L+L +V +L VSPVVH + L+L +
Sbjct: 414 LLGLSLVFLATQPTKLVGNNNV*LRSSLHYGLSLLC*DIVSNLCTVSPVVHHE*LELRGV 235
Query: 295 VNNKLFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
VNN+L E +++++GHQG +LEL+ GV+TL P PA+L A+ +G
Sbjct: 234 VNNELLESIWEVVAGLLIRSVTNIGHQGDTLELSSHPGVNTLRPPPAFLDGDSAITLG 61
>gb|AV533831.1|AV533831 AV533831 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB068f12F 3', mRNA sequence
Length = 477
Score = 262 bits (566), Expect = 1e-068
Identities = 109/132 (82%), Positives = 119/132 (90%)
Frame = +2 / +3
Query: 68 VPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDK 247
VPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GYGSDK
Sbjct: 3 VPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDK 182
Query: 248 KTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIVVTN 427
KTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QLD+VVTN
Sbjct: 183 KTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVVTN 362
Query: 428 KLARLRSQEDE* 463
+LARLRSQEDE*
Sbjct: 363 RLARLRSQEDE* 398
Score = 106 bits (226), Expect = 8e-022
Identities = 49/114 (42%), Positives = 71/114 (62%)
Frame = -1 / -2
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 398 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 219
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
E +++++GHQ + EL+ ++TL P PA+L V +G
Sbjct: 218 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFLDGDSTVTLG 57
>emb|BX830633.1|CNS0A1Y2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB95ZC06 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 522
Score = 256 bits (554), Expect = 4e-067
Identities = 106/135 (78%), Positives = 120/135 (88%)
Frame = +2 / +2
Query: 59 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 238
KMAVPLLT+K+VKKR +F RP D +K SWRRPKGIDSRVRRKFKG TLMPN+GYG
Sbjct: 8 KMAVPLLTKKVVKKRSAKFIRPQSDCRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYG 187
Query: 239 SDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIV 418
SDKKTRHYLPN FKKF+V+N SELELL+MH+RTYCAEIAHN+ST+KRK IVERA+QLD+V
Sbjct: 188 SDKKTRHYLPNGFKKFIVYNTSELELLMMHHRTYCAEIAHNISTKKRKAIVERASQLDVV 367
Query: 419 VTNKLARLRSQEDE* 463
V+NKL RLRSQEDE*
Sbjct: 368 VSNKLGRLRSQEDE* 412
Score = 111 bits (237), Expect = 2e-023
Identities = 64/136 (47%), Positives = 70/136 (51%)
Frame = -2 / -1
Query: 465 FHXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCIXXXXXSEXXXXX 286
FH L TT SS A ST++ V+ L AISAQ*VL CI SE
Sbjct: 414 FHSSSWLRNLPSLLETTTSS*EALSTMAFLFFVEIL*AISAQ*VLWCIMSSSSSEVL*TM 235
Query: 285 XXXXXLGR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCL 106
GR* VFLS+P P LGIKV PLN LTRESIP WGL+N
Sbjct: 234 NFLNPFGR*WRVFLSDP*PTLGIKVTPLNFLLTRESIPLGLLQLSLTVILQSLWGLMNLA 55
Query: 105 TLFFTIFCVSSGTAIF 58
LFFT F VS+GTAIF
Sbjct: 54 DLFFTTFFVSNGTAIF 7
Score = 108 bits (231), Expect = 2e-022
Identities = 51/118 (43%), Positives = 76/118 (64%)
Frame = -1 / -3
Query: 475 LLNISLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDI 296
LL +SLV LA +P +LVG+++V LRS+LH L+L +V +L VSPVVH + L+L +
Sbjct: 424 LLGLSLVFLATQPTKLVGNNNV*LRSSLHYGLSLLC*DIVSNLCTVSPVVHHE*LELRGV 245
Query: 295 VNNKLFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
VNN+L E +++++GHQG +LEL+ GV+TL P PA+L A+ +G
Sbjct: 244 VNNELLESIWEVVAGLLIRSVTNIGHQGDTLELSSHPGVNTLRPPPAFLDGDSAITLG 71
>gb|AA042212.1|AA042212 24533 CD4-13 Arabidopsis thaliana cDNA clone E4D9T7, mRNA sequence
Length = 515
Score = 252 bits (545), Expect = 8e-066
Identities = 103/130 (79%), Positives = 116/130 (89%)
Frame = +2 / +3
Query: 74 LLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKT 253
LLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GYGSDKKT
Sbjct: 3 LLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKT 182
Query: 254 RHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIVVTNKL 433
RHYLPN FKKF+VHN SELELL+MHNRTYCAEIAHN+ST+KRK IVERA+QLD+VV+NKL
Sbjct: 183 RHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVVSNKL 362
Query: 434 ARLRSQEDE* 463
RLR+QEDE*
Sbjct: 363 GRLRTQEDE* 392
Score = 106 bits (227), Expect = 6e-022
Identities = 50/118 (42%), Positives = 75/118 (63%)
Frame = -1 / -1
Query: 475 LLNISLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDI 296
LL +SLV L +P +LVG+++V LRS+LH L+L +V +L VSPVVH + L+L +
Sbjct: 404 LLGLSLVFLGTQPTKLVGNNNV*LRSSLHYGLSLLC*DIVSNLCTVSPVVHHE*LELRGV 225
Query: 295 VNNKLFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWLKALVAVKMG 122
VNN+L E +++++GHQG +LEL+ GV+TL P PA+L A+ +G
Sbjct: 224 VNNELLESIWEVVAGLLIRSVTNIGHQGDTLELSSHPGVNTLRPPPAFLDGDSAITLG 51
Score = 102 bits (218), Expect = 1e-020
Identities = 60/131 (45%), Positives = 66/131 (50%)
Frame = -2 / -2
Query: 465 FHXXXXXXXXXXXLVTTMSSCAARSTISLRLRVDTLWAISAQ*VLLCIXXXXXSEXXXXX 286
FH L TT SS A ST++ V+ L AISAQ*VLLCI SE
Sbjct: 394 FHSSSWVRNLPSLLETTTSS*EALSTMAFLFFVEIL*AISAQ*VLLCIMSSSSSEVL*TM 215
Query: 285 XXXXXLGR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCL 106
GR* VFLS+P P LGIKV PLN LTRESIP WGL+N
Sbjct: 214 NFLNPFGR*WRVFLSDP*PTLGIKVTPLNFLLTRESIPLGLLQLSLTVILRSLWGLMNLA 35
Query: 105 TLFFTIFCVSS 73
LFFT F VS+
Sbjct: 34 DLFFTTFFVSN 2
>gb|BP796437.1|BP796437 BP796437 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-05-M06 5',
mRNA sequence
Length = 660
Score = 206 bits (444), Expect(2) = 7e-065
Identities = 82/107 (76%), Positives = 93/107 (86%)
Frame = +2 / +1
Query: 59 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 238
KMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GYG
Sbjct: 52 KMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYG 231
Query: 239 SDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKR 379
SDKKTRHYLPN FKKF+VHN SELELL+MHNRTYCAEIAHN++ ++
Sbjct: 232 SDKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNLNKEEK 372
Score = 101 bits (216), Expect(2) = 5e-027
Identities = 53/99 (53%), Positives = 56/99 (56%)
Frame = -2 / -2
Query: 354 AISAQ*VLLCIXXXXXSEXXXXXXXXXXLGR*CLVFLSEPYPMLGIKVHPLNLRLTRESI 175
AISAQ*VLLCI SE GR* VFLS+P P LGIKV PLN LTRESI
Sbjct: 347 AISAQ*VLLCIMSSSSSEVL*TMNFLNPFGR*WRVFLSDP*PTLGIKVTPLNFLLTRESI 168
Query: 174 PXXXXXXXXXXXXXXRWGLLNCLTLFFTIFCVSSGTAIF 58
P WGL+N LFFT F VS+GTAIF
Sbjct: 167 PLGLLQLSLTVILRSLWGLMNLADLFFTTFFVSNGTAIF 51
Score = 63.8 bits (133), Expect(2) = 7e-065
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +2 / +2
Query: 362 VSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE* 463
+ST+KRK IVERA+QLD+VV+NKL RLRSQEDE*
Sbjct: 353 ISTKKRKAIVERASQLDVVVSNKLGRLRSQEDE* 454
Score = 41.4 bits (84), Expect(2) = 5e-027
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = -1 / -3
Query: 475 LLNISLVLLAAEPGELVGDHDVQLRSTLHNLLAL 374
LL +SLV LA +P +LVG+++V LRS+LH L+L
Sbjct: 466 LLGLSLVFLATQPTKLVGNNNV*LRSSLHYGLSL 365
>emb|AL110123.1|ATF15J5 Arabidopsis thaliana DNA chromosome 4, BAC clone F15J5 (ESSA project)
Length = 58427
Score = 229 bits (495), Expect(2) = 4e-063
Identities = 93/106 (87%), Positives = 101/106 (95%)
Frame = +2 / -3
Query: 146 LKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLLM 325
++ SWRRPKGIDSRVRRKFKG TLMPN+GYGSDKKTRHYLPN FKKFVVHN SELELL+M
Sbjct: 22905 IQESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFVVHNTSELELLMM 22726
Query: 326 HNRTYCAEIAHNVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE* 463
HNRTYCAEIAHNVST+KRK IVERA+QLD+VVTN+LARLRSQEDE*
Sbjct: 22725 HNRTYCAEIAHNVSTKKRKAIVERASQLDVVVTNRLARLRSQEDE* 22588
Score = 104 bits (222), Expect(2) = 4e-026
Identities = 47/105 (44%), Positives = 68/105 (64%)
Frame = -1 / +1
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 22588 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 22767
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWL 149
E +++++GHQ + EL+ ++TL P PA+L
Sbjct: 22768 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFL 22902
Score = 44.1 bits (90), Expect(2) = 4e-026
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -2 / +1
Query: 126 WGLLNCLTLFFTIFCVSSGTAIFAN 52
WGL+N LFFT F VS+GTAIFA+
Sbjct: 23284 WGLMNLADLFFTTFLVSNGTAIFAS 23358
Score = 42.8 bits (87), Expect(2) = 4e-063
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / -1
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDR 136
A MAVPLLT+K+VKKR +F RP DR
Sbjct: 23354 ANMAVPLLTKKVVKKRSAKFIRPQSDR 23274
>emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 48
Length = 194143
Score = 229 bits (495), Expect(2) = 1e-062
Identities = 93/106 (87%), Positives = 101/106 (95%)
Frame = +2 / -3
Query: 146 LKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLLM 325
++ SWRRPKGIDSRVRRKFKG TLMPN+GYGSDKKTRHYLPN FKKFVVHN SELELL+M
Sbjct: 3314 IQESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFVVHNTSELELLMM 3135
Query: 326 HNRTYCAEIAHNVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE* 463
HNRTYCAEIAHNVST+KRK IVERA+QLD+VVTN+LARLRSQEDE*
Sbjct: 3134 HNRTYCAEIAHNVSTKKRKAIVERASQLDVVVTNRLARLRSQEDE* 2997
Score = 104 bits (222), Expect(2) = 1e-025
Identities = 47/105 (44%), Positives = 68/105 (64%)
Frame = -1 / +3
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 2997 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 3176
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWL 149
E +++++GHQ + EL+ ++TL P PA+L
Sbjct: 3177 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFL 3311
Score = 44.1 bits (90), Expect(2) = 1e-025
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -2 / +3
Query: 126 WGLLNCLTLFFTIFCVSSGTAIFAN 52
WGL+N LFFT F VS+GTAIFA+
Sbjct: 3693 WGLMNLADLFFTTFLVSNGTAIFAS 3767
Score = 42.8 bits (87), Expect(2) = 1e-062
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / -1
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDR 136
A MAVPLLT+K+VKKR +F RP DR
Sbjct: 3763 ANMAVPLLTKKVVKKRSAKFIRPQSDR 3683
>emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 47
Length = 198067
Score = 229 bits (495), Expect(2) = 1e-062
Identities = 93/106 (87%), Positives = 101/106 (95%)
Frame = +2 / -1
Query: 146 LKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLLM 325
++ SWRRPKGIDSRVRRKFKG TLMPN+GYGSDKKTRHYLPN FKKFVVHN SELELL+M
Sbjct: 196381 IQESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFVVHNTSELELLMM 196202
Query: 326 HNRTYCAEIAHNVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE* 463
HNRTYCAEIAHNVST+KRK IVERA+QLD+VVTN+LARLRSQEDE*
Sbjct: 196201 HNRTYCAEIAHNVSTKKRKAIVERASQLDVVVTNRLARLRSQEDE* 196064
Score = 104 bits (222), Expect(2) = 1e-025
Identities = 47/105 (44%), Positives = 68/105 (64%)
Frame = -1 / +2
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 196064 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 196243
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWL 149
E +++++GHQ + EL+ ++TL P PA+L
Sbjct: 196244 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFL 196378
Score = 44.1 bits (90), Expect(2) = 1e-025
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -2 / +2
Query: 126 WGLLNCLTLFFTIFCVSSGTAIFAN 52
WGL+N LFFT F VS+GTAIFA+
Sbjct: 196760 WGLMNLADLFFTTFLVSNGTAIFAS 196834
Score = 42.8 bits (87), Expect(2) = 1e-062
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / -2
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDR 136
A MAVPLLT+K+VKKR +F RP DR
Sbjct: 196830 ANMAVPLLTKKVVKKRSAKFIRPQSDR 196750
>gb|BP797201.1|BP797201 BP797201 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-02-H20 5',
mRNA sequence
Length = 408
Score = 238 bits (515), Expect = 1e-061
Identities = 99/122 (81%), Positives = 108/122 (88%)
Frame = +2 / +1
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 43 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 222
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDI 415
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QLD+
Sbjct: 223 GSDKKTRHYLPNGFKKFVVHNKSELELLMMHNRTYCAEIAHNVSTKKRKGIVERASQLDV 402
Query: 416 VV 421
VV
Sbjct: 403 VV 408
Score = 83.5 bits (176), Expect(2) = 5e-021
Identities = 40/72 (55%), Positives = 44/72 (61%)
Frame = -2 / -2
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT
Sbjct: 254 GR**RVFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTT 75
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 74 FLVSNGTAIFAS 39
Score = 39.6 bits (80), Expect(2) = 5e-021
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -2 / -2
Query: 420 TTMSSCAARSTISLRLRVDTLWAISAQ*VLLCI 322
TT SS A STI V+TL AISAQ*VLLCI
Sbjct: 407 TTTSS*EALSTIPFLFLVETL*AISAQ*VLLCI 309
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 229 bits (495), Expect(2) = 1e-060
Identities = 93/106 (87%), Positives = 101/106 (95%)
Frame = +2 / -1
Query: 146 LKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLLM 325
++ SWRRPKGIDSRVRRKFKG TLMPN+GYGSDKKTRHYLPN FKKFVVHN SELELL+M
Sbjct: 5948788 IQESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFVVHNTSELELLMM 5948609
Query: 326 HNRTYCAEIAHNVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE* 463
HNRTYCAEIAHNVST+KRK IVERA+QLD+VVTN+LARLRSQEDE*
Sbjct: 5948608 HNRTYCAEIAHNVSTKKRKAIVERASQLDVVVTNRLARLRSQEDE* 5948471
Score = 104 bits (222), Expect(2) = 8e-024
Identities = 47/105 (44%), Positives = 68/105 (64%)
Frame = -1 / +2
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 5948471 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 5948650
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWL 149
E +++++GHQ + EL+ ++TL P PA+L
Sbjct: 5948651 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFL 5948785
Score = 44.1 bits (90), Expect(2) = 8e-024
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -2 / +2
Query: 126 WGLLNCLTLFFTIFCVSSGTAIFAN 52
WGL+N LFFT F VS+GTAIFA+
Sbjct: 5949167 WGLMNLADLFFTTFLVSNGTAIFAS 5949241
Score = 42.8 bits (87), Expect(2) = 1e-060
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / -2
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDR 136
A MAVPLLT+K+VKKR +F RP DR
Sbjct: 5949237 ANMAVPLLTKKVVKKRSAKFIRPQSDR 5949157
>gb|AI993586.1|AI993586 701496688 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701496688, mRNA sequence
Length = 445
Score = 226 bits (488), Expect(2) = 3e-059
Identities = 92/116 (79%), Positives = 101/116 (87%)
Frame = +2 / +3
Query: 50 RFAKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNI 229
R KMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+
Sbjct: 24 RGVKMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNV 203
Query: 230 GYGSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVER 397
GYGSDKKTRHYLPN FKKF+VHN SELELL+MHNRTYCAEIAHN+ST+KRK IVER
Sbjct: 204 GYGSDKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVER 371
Score = 107 bits (229), Expect = 3e-022
Identities = 58/115 (50%), Positives = 64/115 (55%)
Frame = -2 / -1
Query: 393 STISLRLRVDTLWAISAQ*VLLCIXXXXXSEXXXXXXXXXXLGR*CLVFLSEPYPMLGIK 214
ST++ V+ L AISAQ*VLLCI SE GR* VFLS+P P LGIK
Sbjct: 367 STMAFLFFVEIL*AISAQ*VLLCIMSSSSSEVL*TMNFLNPFGR*WRVFLSDP*PTLGIK 188
Query: 213 VHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTIFCVSSGTAIFANL 49
V PLN LTRESIP WGL+N LFFT F VS+GTAIF L
Sbjct: 187 VTPLNFLLTRESIPLGLLQLSLTVILRSLWGLMNLADLFFTTFFVSNGTAIFTPL 23
Score = 24.9 bits (48), Expect(2) = 3e-059
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / +1
Query: 425 NKLARLRSQEDE* 463
NKL RLR++EDE*
Sbjct: 397 NKLGRLRTKEDE* 435
>gb|BP813684.1|BP813684 BP813684 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-33-E23 5',
mRNA sequence
Length = 381
Score = 230 bits (497), Expect = 3e-059
Identities = 95/117 (81%), Positives = 103/117 (88%)
Frame = +2 / +1
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 31 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 210
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQ 406
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+Q
Sbjct: 211 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQ 381
>gb|BP815143.1|BP815143 BP815143 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-37-P04 5',
mRNA sequence
Length = 383
Score = 230 bits (497), Expect = 3e-059
Identities = 95/117 (81%), Positives = 103/117 (88%)
Frame = +2 / +1
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 31 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 210
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQ 406
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+Q
Sbjct: 211 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQ 381
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 229 bits (495), Expect = 6e-059
Identities = 93/106 (87%), Positives = 101/106 (95%)
Frame = +2 / -1
Query: 146 LKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLLM 325
++ SWRRPKGIDSRVRRKFKG TLMPN+GYGSDKKTRHYLPN FKKFVVHN SELELL+M
Sbjct: 10036044 IQESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFVVHNTSELELLMM 10035865
Query: 326 HNRTYCAEIAHNVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE* 463
HNRTYCAEIAHNVST+KRK IVERA+QLD+VVTN+LARLRSQEDE*
Sbjct: 10035864 HNRTYCAEIAHNVSTKKRKAIVERASQLDVVVTNRLARLRSQEDE* 10035727
Score = 104 bits (222), Expect = 3e-021
Identities = 47/105 (44%), Positives = 68/105 (64%)
Frame = -1 / +1
Query: 463 SLVLLAAEPGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
SLV LA EP + VG+++V LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+
Sbjct: 10035727 SLVFLATEPSKPVGNNNV*LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNE 10035906
Query: 283 LFEXXXXXXXXXXXGAISDVGHQGASLELTPDAGVDTLGPAPAWL 149
E +++++GHQ + EL+ ++TL P PA+L
Sbjct: 10035907 FLESIGKIVTSLLVRSVTNIGHQSHTFELSSHP*INTLWPPPAFL 10036041
>gb|BP813243.1|BP813243 BP813243 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-05-N03 5',
mRNA sequence
Length = 410
Score = 156 bits (336), Expect(2) = 1e-058
Identities = 63/80 (78%), Positives = 69/80 (86%)
Frame = +2 / +1
Query: 59 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 238
KMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GYG
Sbjct: 31 KMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYG 210
Query: 239 SDKKTRHYLPNKFKKFVVHN 298
SDKKTRHYLPN FKKF+VHN
Sbjct: 211 SDKKTRHYLPNGFKKFIVHN 270
Score = 92.3 bits (195), Expect(2) = 1e-058
Identities = 37/44 (84%), Positives = 42/44 (95%)
Frame = +2 / +2
Query: 302 SELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIVVTNKL 433
SELELL+MHNRTYCAEIAHN+ST+KRK IVERA+QLD+VV NKL
Sbjct: 275 SELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVVPNKL 406
Score = 84.9 bits (179), Expect(2) = 2e-022
Identities = 40/70 (57%), Positives = 43/70 (61%)
Frame = -2 / -1
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LTRESIP WGL+N LFFT
Sbjct: 239 GR*WRVFLSDP*PTLGIKVTPLNFLLTRESIPLGLLQLSLTVILRSLWGLMNLADLFFTT 60
Query: 87 FCVSSGTAIF 58
F VS+GTAIF
Sbjct: 59 FFVSNGTAIF 30
Score = 43.2 bits (88), Expect(2) = 2e-022
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = -1 / -2
Query: 433 ELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQL 305
+LVG+++V LRS+LH L+L +V +L VSPVVH + L+L
Sbjct: 406 KLVGNNNV*LRSSLHYGLSLLC*DIVSNLCTVSPVVHHE*LEL 278
>gb|BP866168.1|BP866168 BP866168 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-76-M01 5',
mRNA sequence
Length = 398
Score = 211 bits (455), Expect(2) = 9e-058
Identities = 87/109 (79%), Positives = 94/109 (86%)
Frame = +2 / +1
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 28 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 207
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRK 382
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST + K
Sbjct: 208 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVST*EEK 354
Score = 35.0 bits (70), Expect(2) = 9e-058
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2 / +2
Query: 371 RKRKEIVERAAQLDIVVT 424
+KRK IVERA+QLD+VVT
Sbjct: 344 KKRKAIVERASQLDVVVT 397
>gb|Z17739.1|Z17739 ATTS0313 Gif-SeedA+B Arabidopsis thaliana cDNA clone YAP231T7 5'
similar to Human 60S ribosomal protein L32. Swiss-Prot
entry P02433., mRNA sequence
Length = 334
Score = 220 bits (475), Expect = 3e-056
Identities = 90/111 (81%), Positives = 98/111 (88%)
Frame = +2 / +2
Query: 68 VPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDK 247
VPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GYGSDK
Sbjct: 2 VPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDK 181
Query: 248 KTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERA 400
KTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST++RK IVERA
Sbjct: 182 KTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKRRKAIVERA 334
>gb|BP824441.1|BP824441 BP824441 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-09-I24 5',
mRNA sequence
Length = 406
Score = 180 bits (387), Expect(2) = 7e-056
Identities = 74/94 (78%), Positives = 80/94 (85%)
Frame = +2 / +3
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 36 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 215
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRT 337
GSDKKTRHYLPN FKKFVVHN SELE L+MHNRT
Sbjct: 216 GSDKKTRHYLPNGFKKFVVHNTSELEWLMMHNRT 317
Score = 59.7 bits (124), Expect(2) = 7e-056
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = +2 / +1
Query: 338 YCAEIAHNVSTRKRKEIVERAAQLDIVVT 424
YCAE+AHNVST+KRK +VERA+QLD+VVT
Sbjct: 319 YCAEMAHNVSTKKRKAMVERASQLDVVVT 405
>gb|AV532744.1|AV532744 AV532744 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB049c07F 3', mRNA sequence
Length = 442
Score = 219 bits (472), Expect = 9e-056
Identities = 88/102 (86%), Positives = 96/102 (94%)
Frame = +2 / -2
Query: 158 WRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRT 337
WRRPKGIDSRVRRKFKG TLMPN+GYGSDKKTRHYLPN FKKF+VHN SELELL+MHNRT
Sbjct: 441 WRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFIVHNTSELELLMMHNRT 262
Query: 338 YCAEIAHNVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE* 463
YCAEIA N+ST+KRK IVERA+QLD+VV+NKL RLRSQEDE*
Sbjct: 261 YCAEIAPNISTKKRKAIVERASQLDVVVSNKLGRLRSQEDE* 136
>gb|T22115.1|T22115 4123 Lambda-PRL2 Arabidopsis thaliana cDNA clone 96O21T7, mRNA
sequence
Length = 515
Score = 217 bits (469), Expect = 2e-055
Identities = 90/115 (78%), Positives = 97/115 (84%)
Frame = +2 / +2
Query: 65 AVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSD 244
AVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG T MPN+GYGSD
Sbjct: 2 AVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTXMPNVGYGSD 181
Query: 245 KKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQL 409
KKTRHYLPN FKKFVVHN S LELL+MHNRTYCAEIAHNV T KRK I ERA+QL
Sbjct: 182 KKTRHYLPNGFKKFVVHNTSXLELLMMHNRTYCAEIAHNVXTXKRKAIXERASQL 346
>gb|BP860989.1|BP860989 BP860989 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-45-O16 5',
mRNA sequence
Length = 379
Score = 217 bits (468), Expect = 3e-055
Identities = 87/112 (77%), Positives = 97/112 (86%)
Frame = +2 / +3
Query: 59 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 238
KMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GYG
Sbjct: 42 KMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYG 221
Query: 239 SDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVE 394
SDKKTRHYLPN FKKF+VHN SELEL +MH RTYCAE+AHN+ST+KRK IVE
Sbjct: 222 SDKKTRHYLPNGFKKFIVHNTSELELFMMHKRTYCAEMAHNISTKKRKAIVE 377
Score = 106 bits (226), Expect = 8e-022
Identities = 57/112 (50%), Positives = 63/112 (56%)
Frame = -2 / -1
Query: 393 STISLRLRVDTLWAISAQ*VLLCIXXXXXSEXXXXXXXXXXLGR*CLVFLSEPYPMLGIK 214
ST++ V+ L AISAQ*VLLCI SE GR* VFLS+P P LGIK
Sbjct: 376 STMAFLFFVEIL*AISAQ*VLLCIMNSSSSEVL*TMNFLNPFGR*WRVFLSDP*PTLGIK 197
Query: 213 VHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTIFCVSSGTAIF 58
V PLN LTRESIP WGL+N LFFT F VS+GTAIF
Sbjct: 196 VTPLNFLLTRESIPLGLLQLSLTVILRSLWGLMNLADLFFTTFFVSNGTAIF 41
>gb|BP797175.1|BP797175 BP797175 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-02-G09 5',
mRNA sequence
Length = 414
Score = 137 bits (294), Expect(2) = 5e-055
Identities = 56/72 (77%), Positives = 61/72 (84%)
Frame = +2 / +1
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 31 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 210
Query: 236 GSDKKTRHYLPN 271
GSDKKTRHYLPN
Sbjct: 211 GSDKKTRHYLPN 246
Score = 99.6 bits (211), Expect(2) = 5e-055
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = +2 / +3
Query: 278 KKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIVVTNKLAR 439
KKFVVH SELELL+MH RTYCAEIAHNVST+KRK IVERA ++VTN+LAR
Sbjct: 252 KKFVVHKTSELELLMMHKRTYCAEIAHNVSTKKRKAIVERALSYTLLVTNRLAR 413
Score = 83.5 bits (176), Expect(2) = 5e-024
Identities = 40/72 (55%), Positives = 44/72 (61%)
Frame = -2 / -2
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT
Sbjct: 242 GR**RVFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTT 63
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 62 FLVSNGTAIFAS 27
Score = 49.6 bits (102), Expect(2) = 5e-024
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = -1 / -2
Query: 439 PGELVGDHDVQLRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNK 284
P + VG+ S+L+N L+L VV +LS VSP VH QQL+L VNN+
Sbjct: 413 PSKPVGNKQRVAESSLNNCLSLLS*DVVSNLSTVSPFVHHQQLELTCFVNNE 258
>gb|BP853468.1|BP853468 BP853468 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-58-E15 5',
mRNA sequence
Length = 400
Score = 119 bits (255), Expect(2) = 5e-055
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +2 / +3
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A M VPL+T+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 36 ANMGVPLVTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 215
Query: 236 GSDKKTR 256
GSDKKTR
Sbjct: 216 GSDKKTR 236
Score = 117 bits (250), Expect(2) = 5e-055
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = +2 / +1
Query: 245 KKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIV 418
++ HYLPN FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QL++V
Sbjct: 226 RRLAHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLEVV 399
Score = 77.1 bits (162), Expect(2) = 1e-024
Identities = 35/67 (52%), Positives = 40/67 (59%)
Frame = -2 / -1
Query: 252 VFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTIFCVSS 73
VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT F V++
Sbjct: 232 VFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTTFLVTN 53
Query: 72 GTAIFAN 52
GT IFA+
Sbjct: 52 GTPIFAS 32
Score = 57.9 bits (120), Expect(2) = 1e-024
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = -1 / -2
Query: 406 LRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNKLFE 275
LRS+L+N L+L G VV +LS VSPVVH QQL+L +V+N+ E
Sbjct: 387 LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVDNEFLE 256
>gb|T42610.1|T42610 5873 Lambda-PRL2 Arabidopsis thaliana cDNA clone 115C16T7, mRNA
sequence
Length = 474
Score = 215 bits (464), Expect = 1e-054
Identities = 89/120 (74%), Positives = 98/120 (81%)
Frame = +2 / +3
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG T MPN+GY
Sbjct: 18 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTXMPNVGY 197
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLDI 415
GSDKKTRHYLPN FKKFVVHN S LELL+MHNRTYCAEI HNV T + K I RA+QLD+
Sbjct: 198 GSDKKTRHYLPNGFKKFVVHNTSXLELLMMHNRTYCAEIXHNVFTXEGKAIXXRASQLDV 377
>gb|BP848559.1|BP848559 BP848559 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-05-N05 5',
mRNA sequence
Length = 388
Score = 148 bits (318), Expect(2) = 1e-054
Identities = 57/67 (85%), Positives = 64/67 (95%)
Frame = +2 / +3
Query: 212 TLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIV 391
TLMPN+GYGSDKKTRHYLPN FKKF+VHN SELELL+MHNRTYCAE+AHN+ST+KRK IV
Sbjct: 186 TLMPNVGYGSDKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEMAHNISTKKRKGIV 365
Query: 392 ERAAQLD 412
ERA+QLD
Sbjct: 366 ERASQLD 386
Score = 87.2 bits (184), Expect(2) = 1e-054
Identities = 37/53 (69%), Positives = 41/53 (77%)
Frame = +2 / +2
Query: 59 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTL 217
KM VPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG L
Sbjct: 32 KMGVPLLTKKVVKKRSDKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVNL 190
>gb|BP814812.1|BP814812 BP814812 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-36-O10 5',
mRNA sequence
Length = 390
Score = 213 bits (459), Expect = 6e-054
Identities = 85/108 (78%), Positives = 94/108 (87%)
Frame = +2 / +3
Query: 59 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 238
KMAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GYG
Sbjct: 42 KMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYG 221
Query: 239 SDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRK 382
DKKTRHYLPN FKKF+VHN SELEL +MHNRTYCAEIAHN+ST+KRK
Sbjct: 222 FDKKTRHYLPNGFKKFIVHNTSELELFMMHNRTYCAEIAHNISTKKRK 365
Score = 104 bits (222), Expect = 3e-021
Identities = 56/104 (53%), Positives = 58/104 (55%)
Frame = -2 / -3
Query: 369 VDTLWAISAQ*VLLCIXXXXXSEXXXXXXXXXXLGR*CLVFLSEPYPMLGIKVHPLNLRL 190
VD L AISAQ*VLLCI SE GR* VFLS P P LGIKV PLN L
Sbjct: 352 VDIL*AISAQ*VLLCIMNSSSSEVL*TMNFLNPFGR*WRVFLSNP*PTLGIKVTPLNFLL 173
Query: 189 TRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTIFCVSSGTAIF 58
TRESIP WGL+N LFFT F VS+GTAIF
Sbjct: 172 TRESIPLGLLQLSLTVILRSLWGLMNLADLFFTTFFVSNGTAIF 41
>gb|BP858054.1|BP858054 BP858054 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-35-L02 5',
mRNA sequence
Length = 358
Score = 210 bits (452), Expect = 5e-053
Identities = 86/107 (80%), Positives = 93/107 (86%)
Frame = +2 / +3
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 36 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 215
Query: 236 GSDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRK 376
GSDKKTRHYLPN FKKFVVHN SELELL+MHNRTYCAEIA NVST+K
Sbjct: 216 GSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAQNVSTKK 356
>gb|BP845385.1|BP845385 BP845385 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-93-H16 5',
mRNA sequence
Length = 393
Score = 156 bits (336), Expect(2) = 8e-053
Identities = 64/81 (79%), Positives = 69/81 (85%)
Frame = +2 / +3
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 235
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN+GY
Sbjct: 33 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGY 212
Query: 236 GSDKKTRHYLPNKFKKFVVHN 298
GSDKKTRHYLPN FKKFVVHN
Sbjct: 213 GSDKKTRHYLPNGFKKFVVHN 275
Score = 83.5 bits (176), Expect(2) = 5e-023
Identities = 40/72 (55%), Positives = 44/72 (61%)
Frame = -2 / -3
Query: 267 GR*CLVFLSEPYPMLGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTI 88
GR* VFLS+P P LGIKV PLN LT ESIP WGL+N LFFT
Sbjct: 244 GR**RVFLSDP*PTLGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTT 65
Query: 87 FCVSSGTAIFAN 52
F VS+GTAIFA+
Sbjct: 64 FLVSNGTAIFAS 29
Score = 73.0 bits (153), Expect(2) = 8e-053
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +2 / +2
Query: 314 LLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLD 412
LL+MHNRTYCAEIAHNVST+KRK IVERA+QLD
Sbjct: 293 LLMMHNRTYCAEIAHNVSTKKRKAIVERASQLD 391
Score = 46.4 bits (95), Expect(2) = 5e-023
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = -1 / -3
Query: 406 LRSTLHNLLALAGGHVVGDLSAVSPVVHQQQ 314
LRS+L+N L+L G VV +LS VSPVVH QQ
Sbjct: 385 LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQ 293
>gb|BP814162.1|BP814162 BP814162 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-34-M22 5',
mRNA sequence
Length = 399
Score = 208 bits (449), Expect = 1e-052
Identities = 86/116 (74%), Positives = 98/116 (84%)
Frame = +2 / +3
Query: 59 KMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYG 238
KM VP LT+K+VKKR +F RP DR +K SWRRPKG+DSRVRRKFKG TLMP +GYG
Sbjct: 42 KMGVPWLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGMDSRVRRKFKGVTLMPKVGYG 221
Query: 239 SDKKTRHYLPNKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQ 406
SDKKTRHYLPN FKKF+VHN SELELL+MHNRT AE+AHN+ST+KRK IVERA+Q
Sbjct: 222 SDKKTRHYLPNGFKKFMVHNTSELELLMMHNRT*GAEMAHNISTKKRKAIVERASQ 389
>gb|BP863999.1|BP863999 BP863999 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-68-M14 5',
mRNA sequence
Length = 391
Score = 103 bits (219), Expect(3) = 1e-051
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = +2 / +3
Query: 269 NKFKKFVVHNVSELELLLMHNRTYCAEIAHNVSTRKRKEIVERAAQLD 412
N FKKFVVHN SELELL+MHNRTYCAEIAHNVST+KRK IVERA+QLD
Sbjct: 246 NGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLD 389
Score = 99.1 bits (210), Expect(3) = 1e-051
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = +2 / +3
Query: 56 AKMAVPLLTQKIVKKRVKQFKRPHLDRYKCLKPSWRRPKGIDSRVRRKFKGCTLMPN 226
A MAVPLLT+K+VKKR +F RP DR +K SWRRPKGIDSRVRRKFKG TLMPN
Sbjct: 33 ANMAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPN 203
Score = 67.5 bits (141), Expect(2) = 2e-022
Identities = 31/58 (53%), Positives = 34/58 (58%)
Frame = -2 / -1
Query: 225 LGIKVHPLNLRLTRESIPXXXXXXXXXXXXXXRWGLLNCLTLFFTIFCVSSGTAIFAN 52
LGIKV PLN LT ESIP WGL+N LFFT F VS+GTAIFA+
Sbjct: 202 LGIKVTPLNFLLTLESIPFGLLQLSLTVILRSLWGLMNLADLFFTTFLVSNGTAIFAS 29
Score = 60.2 bits (125), Expect(2) = 2e-022
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -1 / -3
Query: 406 LRSTLHNLLALAGGHVVGDLSAVSPVVHQQQLQLGDIVNNKLFE 275
LRS+L+N L+L G VV +LS VSPVVH QQL+L +VNN+ E
Sbjct: 383 LRSSLNNCLSLLSGDVVSNLSTVSPVVHHQQLELTCVVNNEFLE 252
Score = 41.8 bits (85), Expect(3) = 1e-051
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2 / +1
Query: 221 PNIGYGSDKKTRHYLP 268
P +GYGSDKKTRHYLP
Sbjct: 199 PTVGYGSDKKTRHYLP 246
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,178,227,866
Number of Sequences: 1013581
Number of extensions: 13269108
Number of successful extensions: 119839
Number of sequences better than 1.0e-020: 139
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 43018600290
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)