TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2619423.2.1
(886 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|BX832778.1|CNS0A0MK Arabidopsis thaliana Full-length cD... 204 1e-077
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 206 2e-077
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 206 2e-077
dbj|AB017061.1| Arabidopsis thaliana genomic DNA, chromosom... 206 2e-077
emb|AX458729.1| Sequence 1 from Patent WO0246439 206 2e-077
emb|AX458730.1| Sequence 2 from Patent WO0246439 206 2e-077
ref|NM_124270.2| Arabidopsis thaliana transferase AT5G48930... 206 2e-077
gb|AY084652.1| Arabidopsis thaliana clone 114130 mRNA, comp... 206 2e-077
emb|BX830476.1|CNS0A1DG Arabidopsis thaliana Full-length cD... 206 2e-077
emb|BX830912.1|CNS0A0QI Arabidopsis thaliana Full-length cD... 206 2e-077
emb|BX832315.1|CNS0A108 Arabidopsis thaliana Full-length cD... 206 2e-077
emb|BX833325.1|CNS0A0FU Arabidopsis thaliana Full-length cD... 202 4e-076
emb|BX831467.1|CNS09YSD Arabidopsis thaliana Full-length cD... 206 3e-068
gb|AV520681.1|AV520681 AV520681 Arabidopsis thaliana aboveg... 206 3e-068
emb|BX830698.1|CNS0A0OD Arabidopsis thaliana Full-length cD... 206 3e-061
gb|AV782261.1|AV782261 AV782261 RAFL4 Arabidopsis thaliana ... 206 1e-055
gb|AV544780.1|AV544780 AV544780 Arabidopsis thaliana roots ... 206 7e-055
gb|AV524880.1|AV524880 AV524880 Arabidopsis thaliana aboveg... 206 7e-055
emb|AL081339.1|CNS00N19 Arabidopsis thaliana genome survey ... 144 3e-054
gb|AV538516.1|AV538516 AV538516 Arabidopsis thaliana roots ... 206 9e-052
gb|AV555054.1|AV555054 AV555054 Arabidopsis thaliana green ... 206 9e-052
gb|AV534641.1|AV534641 AV534641 Arabidopsis thaliana flower... 204 2e-051
gb|AV540733.1|AV540733 AV540733 Arabidopsis thaliana roots ... 204 3e-051
gb|AV538890.1|AV538890 AV538890 Arabidopsis thaliana roots ... 194 3e-048
gb|AV546668.1|AV546668 AV546668 Arabidopsis thaliana roots ... 172 1e-041
gb|BP615775.1|BP615775 BP615775 RAFL16 Arabidopsis thaliana... 172 1e-041
emb|BX829493.1|CNS0A26N Arabidopsis thaliana Full-length cD... 100 3e-041
gb|AV785581.1|AV785581 AV785581 RAFL6 Arabidopsis thaliana ... 169 1e-040
gb|AV518079.1|AV518079 AV518079 Arabidopsis thaliana aboveg... 169 1e-040
gb|BP606194.1|BP606194 BP606194 RAFL16 Arabidopsis thaliana... 169 1e-040
gb|AV563393.1|AV563393 AV563393 Arabidopsis thaliana green ... 166 9e-040
gb|BP636486.1|BP636486 BP636486 RAFL18 Arabidopsis thaliana... 139 1e-037
gb|AV559259.1|AV559259 AV559259 Arabidopsis thaliana green ... 159 1e-037
gb|BP790265.1|BP790265 BP790265 RAFL7 Arabidopsis thaliana ... 155 1e-036
gb|BP567805.1|BP567805 BP567805 RAFL14 Arabidopsis thaliana... 155 3e-036
gb|AV796296.1|AV796296 AV796296 RAFL9 Arabidopsis thaliana ... 93 1e-035
ref|NM_127464.2| Arabidopsis thaliana unknown protein AT2G1... 86 2e-035
gb|BT002975.1| Arabidopsis thaliana clone RAFL15-09-N24 (R2... 86 2e-035
emb|BX819245.1|CNS0A9WZ Arabidopsis thaliana Full-length cD... 86 2e-035
gb|BT004456.1| Arabidopsis thaliana clone U20482 putative a... 86 2e-035
gb|BP782561.1|BP782561 BP782561 RAFL7 Arabidopsis thaliana ... 150 6e-035
gb|AV788842.1|AV788842 AV788842 RAFL6 Arabidopsis thaliana ... 149 2e-034
gb|BP577707.1|BP577707 BP577707 RAFL14 Arabidopsis thaliana... 145 2e-033
gb|AV522470.1|AV522470 AV522470 Arabidopsis thaliana aboveg... 144 4e-033
gb|AV538914.1|AV538914 AV538914 Arabidopsis thaliana roots ... 144 4e-033
emb|AL081523.1|CNS00N6D Arabidopsis thaliana genome survey ... 89 4e-033
gb|BP641359.1|BP641359 BP641359 RAFL19 Arabidopsis thaliana... 136 6e-032
gb|AC002392.3| Arabidopsis thaliana chromosome 2 clone T20K... 86 2e-029
gb|BP582098.1|BP582098 BP582098 RAFL14 Arabidopsis thaliana... 102 9e-029
gb|BP568729.1|BP568729 BP568729 RAFL14 Arabidopsis thaliana... 62 3e-028
gb|BP565517.1|BP565517 BP565517 RAFL14 Arabidopsis thaliana... 120 1e-027
gb|BP563843.1|BP563843 BP563843 RAFL14 Arabidopsis thaliana... 116 1e-024
gb|BP825261.1|BP825261 BP825261 RAFL19 Arabidopsis thaliana... 59 2e-024
gb|AV800936.1|AV800936 AV800936 RAFL9 Arabidopsis thaliana ... 113 7e-024
gb|AV798258.1|AV798258 AV798258 RAFL9 Arabidopsis thaliana ... 113 9e-024
gb|BP780245.1|BP780245 BP780245 RAFL7 Arabidopsis thaliana ... 92 1e-023
gb|AV553284.1|AV553284 AV553284 Arabidopsis thaliana roots ... 105 1e-023
gb|AV540806.1|AV540806 AV540806 Arabidopsis thaliana roots ... 108 3e-022
emb|BX832376.1|CNS0A0VT Arabidopsis thaliana Full-length cD... 51 8e-021
emb|BX831663.1|CNS0A1X8 Arabidopsis thaliana Full-length cD... 58 8e-021
>emb|BX832778.1|CNS0A0MK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL10ZG04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1443
Score = 204 bits (440), Expect(2) = 1e-077
Identities = 80/110 (72%), Positives = 95/110 (86%)
Frame = +2 / +2
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 1004 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 1183
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DG++SIAI+LQ+EHM+ F K + E
Sbjct: 1184 WGRPIFMGPGGIPYEGLSFVLPSPTNDGNISIAIALQSEHMKLFEKFLFE 1333
Score = 108 bits (231), Expect(2) = 1e-077
Identities = 46/73 (63%), Positives = 54/73 (73%)
Frame = +2 / +2
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V AR LP +Q TKLY ATDGR L+P LP GYFGNVIFTATPLA
Sbjct: 788 YSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAV 967
Query: 191 AGKVTSELAEGAA 229
AG + S+L AA
Sbjct: 968 AGDLLSKLTWYAA 1006
Score = 96.4 bits (204), Expect(2) = 7e-031
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = -2 / -1
Query: 543 SFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQL 364
+F N MCS +A+D LPS LG T +PSY +PPGP+ GRP PKSAS IG TQL
Sbjct: 1323 NFSNSFMCSDWRAMAIDMLPSLVGLGSTKDKPSYGIPPGPIKIGRPQPKSAS*IGNLTQL 1144
Query: 363 VSPRFGQRKVCAP 325
V P+FG VCAP
Sbjct: 1143 VIPKFGHL*VCAP 1105
Score = 63.8 bits (133), Expect(2) = 7e-031
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = -2 / -1
Query: 195 PASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARETHFQTCAASTAYV 16
PA+A+GVAV +T PK P GS G S+ PSVA Y+ V S G RA T TC A+ +Y
Sbjct: 972 PATANGVAVNITFPK*PGGSCGRSLDLPSVAMYSFVSWSFGSPRAFPTDLHTCPANISYE 793
Query: 15 L 13
L
Sbjct: 792 L 790
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 206 bits (444), Expect(2) = 2e-077
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / -2
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 19854215 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 19854036
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 19854035 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 19853886
Score = 105 bits (225), Expect(2) = 2e-077
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = +2 / -2
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V AR LP +Q TKLY ATDGR L+P LP GYFGNVIFTATPLA
Sbjct: 19854431 YSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAV 19854252
Query: 191 AGKVTSE 211
AG + S+
Sbjct: 19854251 AGDLLSK 19854231
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 206 bits (444), Expect(2) = 2e-077
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / -1
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 17897116 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 17896937
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 17896936 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 17896787
Score = 105 bits (225), Expect(2) = 2e-077
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = +2 / -1
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V AR LP +Q TKLY ATDGR L+P LP GYFGNVIFTATPLA
Sbjct: 17897332 YSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAV 17897153
Query: 191 AGKVTSE 211
AG + S+
Sbjct: 17897152 AGDLLSK 17897132
>dbj|AB017061.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19E20
Length = 61712
Score = 206 bits (444), Expect(2) = 2e-077
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / -3
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 13053 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 12874
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 12873 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 12724
Score = 105 bits (225), Expect(2) = 2e-077
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = +2 / -3
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V AR LP +Q TKLY ATDGR L+P LP GYFGNVIFTATPLA
Sbjct: 13269 YSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAV 13090
Query: 191 AGKVTSE 211
AG + S+
Sbjct: 13089 AGDLLSK 13069
Score = 96.8 bits (205), Expect(2) = 2e-029
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = -2 / +2
Query: 543 SFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQL 364
+F N MCS +A D+LPS LG T +PSY +PPGP+ GRP PKSAS IG TQL
Sbjct: 12734 NFSNSFMCSDWRAMATDKLPSLVGLGSTKDKPSYGIPPGPIKIGRPQPKSAS*IGNLTQL 12913
Query: 363 VSPRFGQRKVCAP 325
V P+FG VCAP
Sbjct: 12914 VIPKFGHL*VCAP 12952
Score = 63.8 bits (133), Expect(2) = 2e-029
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = -2 / +2
Query: 195 PASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARETHFQTCAASTAYV 16
PA+A+GVAV +T PK P GS G S+ PSVA Y+ V S G RA T TC A+ +Y
Sbjct: 13085 PATANGVAVNITFPK*PGGSCGRSLDLPSVAMYSFVSWSFGSPRAFPTDLHTCPANISYE 13264
Query: 15 L 13
L
Sbjct: 13265 L 13267
>emb|AX458729.1| Sequence 1 from Patent WO0246439
Length = 7438
Score = 206 bits (444), Expect(2) = 2e-077
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / -3
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 683 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 504
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 503 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 354
Score = 105 bits (225), Expect(2) = 2e-077
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = +2 / -3
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V AR LP +Q TKLY ATDGR L+P LP GYFGNVIFTATPLA
Sbjct: 899 YSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAV 720
Query: 191 AGKVTSE 211
AG + S+
Sbjct: 719 AGDLLSK 699
Score = 96.8 bits (205), Expect(2) = 3e-030
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = -2 / +1
Query: 543 SFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQL 364
+F N MCS +A D+LPS LG T +PSY +PPGP+ GRP PKSAS IG TQL
Sbjct: 364 NFSNSFMCSDWRAMATDKLPSLVGLGSTKDKPSYGIPPGPIKIGRPQPKSAS*IGNLTQL 543
Query: 363 VSPRFGQRKVCAP 325
V P+FG VCAP
Sbjct: 544 VIPKFGHL*VCAP 582
Score = 63.8 bits (133), Expect(2) = 3e-030
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = -2 / +1
Query: 195 PASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARETHFQTCAASTAYV 16
PA+A+GVAV +T PK P GS G S+ PSVA Y+ V S G RA T TC A+ +Y
Sbjct: 715 PATANGVAVNITFPK*PGGSCGRSLDLPSVAMYSFVSWSFGSPRAFPTDLHTCPANISYE 894
Query: 15 L 13
L
Sbjct: 895 L 897
>emb|AX458730.1| Sequence 2 from Patent WO0246439
Length = 3499
Score = 206 bits (444), Expect(2) = 2e-077
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / -3
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 683 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 504
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 503 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 354
Score = 105 bits (225), Expect(2) = 2e-077
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = +2 / -3
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V AR LP +Q TKLY ATDGR L+P LP GYFGNVIFTATPLA
Sbjct: 899 YSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAV 720
Query: 191 AGKVTSE 211
AG + S+
Sbjct: 719 AGDLLSK 699
Score = 96.8 bits (205), Expect(2) = 1e-030
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = -2 / +1
Query: 543 SFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQL 364
+F N MCS +A D+LPS LG T +PSY +PPGP+ GRP PKSAS IG TQL
Sbjct: 364 NFSNSFMCSDWRAMATDKLPSLVGLGSTKDKPSYGIPPGPIKIGRPQPKSAS*IGNLTQL 543
Query: 363 VSPRFGQRKVCAP 325
V P+FG VCAP
Sbjct: 544 VIPKFGHL*VCAP 582
Score = 63.8 bits (133), Expect(2) = 1e-030
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = -2 / +1
Query: 195 PASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARETHFQTCAASTAYV 16
PA+A+GVAV +T PK P GS G S+ PSVA Y+ V S G RA T TC A+ +Y
Sbjct: 715 PATANGVAVNITFPK*PGGSCGRSLDLPSVAMYSFVSWSFGSPRAFPTDLHTCPANISYE 894
Query: 15 L 13
L
Sbjct: 895 L 897
>ref|NM_124270.2| Arabidopsis thaliana transferase AT5G48930 mRNA, complete cds
Length = 1710
Score = 206 bits (444), Expect(2) = 2e-077
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / +3
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 1020 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 1199
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 1200 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 1349
Score = 105 bits (225), Expect(2) = 2e-077
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = +2 / +3
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V AR LP +Q TKLY ATDGR L+P LP GYFGNVIFTATPLA
Sbjct: 804 YSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAV 983
Query: 191 AGKVTSE 211
AG + S+
Sbjct: 984 AGDLLSK 1004
Score = 96.8 bits (205), Expect(2) = 6e-031
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = -2 / -3
Query: 543 SFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQL 364
+F N MCS +A D+LPS LG T +PSY +PPGP+ GRP PKSAS IG TQL
Sbjct: 1339 NFSNSFMCSDWRAMATDKLPSLVGLGSTKDKPSYGIPPGPIKIGRPQPKSAS*IGNLTQL 1160
Query: 363 VSPRFGQRKVCAP 325
V P+FG VCAP
Sbjct: 1159 VIPKFGHL*VCAP 1121
Score = 63.8 bits (133), Expect(2) = 6e-031
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = -2 / -3
Query: 195 PASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARETHFQTCAASTAYV 16
PA+A+GVAV +T PK P GS G S+ PSVA Y+ V S G RA T TC A+ +Y
Sbjct: 988 PATANGVAVNITFPK*PGGSCGRSLDLPSVAMYSFVSWSFGSPRAFPTDLHTCPANISYE 809
Query: 15 L 13
L
Sbjct: 808 L 806
>gb|AY084652.1| Arabidopsis thaliana clone 114130 mRNA, complete sequence
Length = 1596
Score = 206 bits (444), Expect(2) = 2e-077
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / +2
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 1019 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 1198
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 1199 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 1348
Score = 105 bits (225), Expect(2) = 2e-077
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = +2 / +2
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V AR LP +Q TKLY ATDGR L+P LP GYFGNVIFTATPLA
Sbjct: 803 YSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAV 982
Query: 191 AGKVTSE 211
AG + S+
Sbjct: 983 AGDLLSK 1003
Score = 99.6 bits (211), Expect(2) = 3e-030
Identities = 42/73 (57%), Positives = 49/73 (67%)
Frame = -2 / -1
Query: 543 SFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQL 364
+F N MCS +A D+LPS LG TN +PSY +PPGP+ GRP PKSAS IG TQL
Sbjct: 1338 NFSNSFMCSDWRAMATDKLPSLVGLGSTNDKPSYGIPPGPIKIGRPQPKSAS*IGNLTQL 1159
Query: 363 VSPRFGQRKVCAP 325
V P+FG VCAP
Sbjct: 1158 VIPKFGHL*VCAP 1120
Score = 58.8 bits (122), Expect(2) = 3e-030
Identities = 30/61 (49%), Positives = 37/61 (60%)
Frame = -2 / -1
Query: 195 PASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARETHFQTCAASTAYV 16
PA+A+GVAV +T PK P GS G S+ PSVA Y+ V S G RA T T A+ +Y
Sbjct: 987 PATANGVAVNITFPK*PGGSCGRSLDLPSVAMYSFVSWSFGSPRAFPTDLHTWPANISYE 808
Query: 15 L 13
L
Sbjct: 807 L 805
>emb|BX830476.1|CNS0A1DG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB84ZE02 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1571
Score = 206 bits (444), Expect(2) = 2e-077
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / +2
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 1001 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 1180
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 1181 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 1330
Score = 105 bits (225), Expect(2) = 2e-077
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = +2 / +2
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V AR LP +Q TKLY ATDGR L+P LP GYFGNVIFTATPLA
Sbjct: 785 YSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAV 964
Query: 191 AGKVTSE 211
AG + S+
Sbjct: 965 AGDLLSK 985
Score = 96.8 bits (205), Expect(2) = 5e-031
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = -2 / -3
Query: 543 SFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQL 364
+F N MCS +A D+LPS LG T +PSY +PPGP+ GRP PKSAS IG TQL
Sbjct: 1320 NFSNSFMCSDWRAMATDKLPSLVGLGSTKDKPSYGIPPGPIKIGRPQPKSAS*IGNLTQL 1141
Query: 363 VSPRFGQRKVCAP 325
V P+FG VCAP
Sbjct: 1140 VIPKFGHL*VCAP 1102
Score = 63.8 bits (133), Expect(2) = 5e-031
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = -2 / -3
Query: 195 PASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARETHFQTCAASTAYV 16
PA+A+GVAV +T PK P GS G S+ PSVA Y+ V S G RA T TC A+ +Y
Sbjct: 969 PATANGVAVNITFPK*PGGSCGRSLDLPSVAMYSFVSWSFGSPRAFPTDLHTCPANISYE 790
Query: 15 L 13
L
Sbjct: 789 L 787
>emb|BX830912.1|CNS0A0QI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS39ZB07 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1525
Score = 206 bits (444), Expect(2) = 2e-077
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / +3
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 999 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 1178
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 1179 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 1328
Score = 105 bits (225), Expect(2) = 2e-077
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = +2 / +3
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V AR LP +Q TKLY ATDGR L+P LP GYFGNVIFTATPLA
Sbjct: 783 YSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAV 962
Query: 191 AGKVTSE 211
AG + S+
Sbjct: 963 AGDLLSK 983
Score = 96.8 bits (205), Expect(2) = 5e-031
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = -2 / -1
Query: 543 SFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQL 364
+F N MCS +A D+LPS LG T +PSY +PPGP+ GRP PKSAS IG TQL
Sbjct: 1318 NFSNSFMCSDWRAMATDKLPSLVGLGSTKDKPSYGIPPGPIKIGRPQPKSAS*IGNLTQL 1139
Query: 363 VSPRFGQRKVCAP 325
V P+FG VCAP
Sbjct: 1138 VIPKFGHL*VCAP 1100
Score = 63.8 bits (133), Expect(2) = 5e-031
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = -2 / -1
Query: 195 PASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARETHFQTCAASTAYV 16
PA+A+GVAV +T PK P GS G S+ PSVA Y+ V S G RA T TC A+ +Y
Sbjct: 967 PATANGVAVNITFPK*PGGSCGRSLDLPSVAMYSFVSWSFGSPRAFPTDLHTCPANISYE 788
Query: 15 L 13
L
Sbjct: 787 L 785
>emb|BX832315.1|CNS0A108 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH64ZH06 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1428
Score = 206 bits (444), Expect(2) = 2e-077
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / +2
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 980 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 1159
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 1160 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 1309
Score = 105 bits (225), Expect(2) = 2e-077
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = +2 / +2
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V AR LP +Q TKLY ATDGR L+P LP GYFGNVIFTATPLA
Sbjct: 764 YSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAV 943
Query: 191 AGKVTSE 211
AG + S+
Sbjct: 944 AGDLLSK 964
Score = 96.8 bits (205), Expect(2) = 5e-031
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = -2 / -1
Query: 543 SFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQL 364
+F N MCS +A D+LPS LG T +PSY +PPGP+ GRP PKSAS IG TQL
Sbjct: 1299 NFSNSFMCSDWRAMATDKLPSLVGLGSTKDKPSYGIPPGPIKIGRPQPKSAS*IGNLTQL 1120
Query: 363 VSPRFGQRKVCAP 325
V P+FG VCAP
Sbjct: 1119 VIPKFGHL*VCAP 1081
Score = 63.8 bits (133), Expect(2) = 5e-031
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = -2 / -1
Query: 195 PASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARETHFQTCAASTAYV 16
PA+A+GVAV +T PK P GS G S+ PSVA Y+ V S G RA T TC A+ +Y
Sbjct: 948 PATANGVAVNITFPK*PGGSCGRSLDLPSVAMYSFVSWSFGSPRAFPTDLHTCPANISYE 769
Query: 15 L 13
L
Sbjct: 768 L 766
>emb|BX833325.1|CNS0A0FU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL44ZG02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 864
Score = 202 bits (435), Expect(2) = 4e-076
Identities = 80/110 (72%), Positives = 94/110 (85%)
Frame = +2 / +2
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QP LSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 266 AGQIHDFLVRMDDNYLRSALDYLEMQPVLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 445
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 446 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 595
Score = 105 bits (225), Expect(2) = 4e-076
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = +2 / +2
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V AR LP +Q TKLY ATDGR L+P LP GYFGNVIFTATPLA
Sbjct: 50 YSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAV 229
Query: 191 AGKVTSE 211
AG + S+
Sbjct: 230 AGDLLSK 250
Score = 96.8 bits (205), Expect(2) = 6e-032
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = -2 / -1
Query: 543 SFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQL 364
+F N MCS +A D+LPS LG T +PSY +PPGP+ GRP PKSAS IG TQL
Sbjct: 585 NFSNSFMCSDWRAMATDKLPSLVGLGSTKDKPSYGIPPGPIKIGRPQPKSAS*IGNLTQL 406
Query: 363 VSPRFGQRKVCAP 325
V P+FG VCAP
Sbjct: 405 VIPKFGHL*VCAP 367
Score = 66.1 bits (138), Expect(2) = 6e-032
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = -2 / -1
Query: 195 PASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCSGGRLRARETHFQTCAASTAYV 16
PA+A+GVAV +T PK P GS G S+ PSVA Y+ V S G RA T QTC A+ +Y
Sbjct: 234 PATANGVAVNITFPK*PGGSCGRSLDLPSVAMYSFVSWSFGSPRAFPTDLQTCPANISYE 55
Query: 15 L 13
L
Sbjct: 54 L 52
>emb|BX831467.1|CNS09YSD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS93ZH08 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1601
Score = 206 bits (445), Expect(2) = 3e-068
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / +3
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 1002 AGQIHDLLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 1181
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 1182 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 1331
Score = 96.8 bits (205), Expect(2) = 3e-026
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = -2 / -2
Query: 543 SFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQL 364
+F N MCS +A D+LPS LG T +PSY +PPGP+ GRP PKSAS IG TQL
Sbjct: 1321 NFSNSFMCSDWRAMATDKLPSLVGLGSTKDKPSYGIPPGPIKIGRPQPKSAS*IGNLTQL 1142
Query: 363 VSPRFGQRKVCAP 325
V P+FG VCAP
Sbjct: 1141 VIPKFGHL*VCAP 1103
Score = 74.8 bits (157), Expect(2) = 3e-068
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +2 / +3
Query: 80 EQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVTS 208
+Q TKLY ATDGR L+P LP GYFGNVIFTATPLA AG + S
Sbjct: 855 DQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLS 983
Score = 47.8 bits (98), Expect(2) = 3e-026
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -2 / -2
Query: 195 PASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLVGCS 79
PA+A+GVAV +T PK P GS G S+ PSVA Y+ V S
Sbjct: 970 PATANGVAVNITFPK*PGGSCGRSLDLPSVAMYSFVSWS 854
>gb|AV520681.1|AV520681 AV520681 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ28e05F 3', mRNA
sequence
Length = 628
Score = 206 bits (444), Expect(2) = 3e-068
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / -1
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 481 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 302
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 301 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 152
Score = 96.8 bits (205), Expect(2) = 2e-026
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = -2 / +3
Query: 543 SFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQL 364
+F N MCS +A D+LPS LG T +PSY +PPGP+ GRP PKSAS IG TQL
Sbjct: 162 NFSNSFMCSDWRAMATDKLPSLVGLGSTKDKPSYGIPPGPIKIGRPQPKSAS*IGNLTQL 341
Query: 363 VSPRFGQRKVCAP 325
V P+FG VCAP
Sbjct: 342 VIPKFGHL*VCAP 380
Score = 75.3 bits (158), Expect(2) = 3e-068
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +2 / -1
Query: 80 EQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVTSE 211
+Q TKLY ATDGR L+P LP GYFGNVIFTATPLA AG + S+
Sbjct: 628 DQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSK 497
Score = 46.9 bits (96), Expect(2) = 2e-026
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = -2 / +3
Query: 195 PASASGVAVKMTLPKYPSGSGGCSV*RPSVAQYNLV 88
PA+A+GVAV +T PK P GS G S+ PSVA Y+ V
Sbjct: 513 PATANGVAVNITFPK*PGGSCGRSLDLPSVAMYSFV 620
>emb|BX830698.1|CNS0A0OD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS15ZE08 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1508
Score = 206 bits (444), Expect(2) = 3e-061
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / +2
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 998 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 1177
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 1178 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 1327
Score = 96.8 bits (205), Expect(2) = 1e-022
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = -2 / -3
Query: 543 SFRNFSMCSACNEIAMDRLPSPFALGRTNARPSYAMPPGPMNTGRPHPKSASWIGRRTQL 364
+F N MCS +A D+LPS LG T +PSY +PPGP+ GRP PKSAS IG TQL
Sbjct: 1317 NFSNSFMCSDWRAMATDKLPSLVGLGSTKDKPSYGIPPGPIKIGRPQPKSAS*IGNLTQL 1138
Query: 363 VSPRFGQRKVCAP 325
V P+FG VCAP
Sbjct: 1137 VIPKFGHL*VCAP 1099
Score = 51.9 bits (107), Expect(2) = 3e-061
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +2 / +2
Query: 125 LQPPLPDGYFGNVIFTATPLAEAGKVTSE 211
L+P LP GYFGNVIFTATPLA AG + S+
Sbjct: 896 LRPQLPPGYFGNVIFTATPLAVAGDLLSK 982
Score = 35.4 bits (71), Expect(2) = 1e-022
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -2 / -3
Query: 195 PASASGVAVKMTLPKYPSGSGGCSV 121
PA+A+GVAV +T PK P GS G S+
Sbjct: 966 PATANGVAVNITFPK*PGGSCGRSL 892
>gb|AV782261.1|AV782261 AV782261 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-15-L12 3',
mRNA sequence
Length = 681
Score = 206 bits (444), Expect(2) = 1e-055
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / -1
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 609 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 430
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 429 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 280
Score = 33.6 bits (67), Expect(2) = 1e-055
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / -1
Query: 155 GNVIFTATPLAEAGKVTSE 211
GNVIFTATPLA AG + S+
Sbjct: 681 GNVIFTATPLAVAGDLLSK 625
>gb|AV544780.1|AV544780 AV544780 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ59b06F 3', mRNA sequence
Length = 651
Score = 206 bits (444), Expect(2) = 7e-055
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / -1
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 582 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 403
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 402 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 253
Score = 30.9 bits (61), Expect(2) = 7e-055
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / -1
Query: 158 NVIFTATPLAEAGKVTSE 211
NVIFTATPLA AG + S+
Sbjct: 651 NVIFTATPLAVAGDLLSK 598
>gb|AV524880.1|AV524880 AV524880 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD12b08R 5', mRNA
sequence
Length = 528
Score = 206 bits (444), Expect(2) = 7e-055
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / -1
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 459 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 280
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 279 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 130
Score = 30.9 bits (61), Expect(2) = 7e-055
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / -1
Query: 158 NVIFTATPLAEAGKVTSE 211
NVIFTATPLA AG + S+
Sbjct: 528 NVIFTATPLAVAGDLLSK 475
>emb|AL081339.1|CNS00N19 Arabidopsis thaliana genome survey sequence SP6 end of BAC F2M22 of
IGF library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 479
Score = 144 bits (310), Expect(3) = 3e-054
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = +2 / -2
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 211 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 32
Query: 404 WGRPVFMGPG 433
WGRP+FMGPG
Sbjct: 31 WGRPIFMGPG 2
Score = 57.4 bits (119), Expect(3) = 3e-054
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +2 / -3
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGR 118
+S+Y +LA HVW+ V AR LP +Q TKLY ATDGR
Sbjct: 426 YSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGR 319
Score = 51.0 bits (105), Expect(3) = 3e-054
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +2 / -2
Query: 125 LQPPLPDGYFGNVIFTATPLAEAGKVTSE 211
++P LP GYFGNVIFTATPLA AG + S+
Sbjct: 313 IRPQLPPGYFGNVIFTATPLAVAGDLLSK 227
>gb|AV538516.1|AV538516 AV538516 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ117h01F 3', mRNA sequence
Length = 599
Score = 206 bits (444), Expect = 9e-052
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / -2
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 577 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 398
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 397 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 248
>gb|AV555054.1|AV555054 AV555054 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ002g05F 3', mRNA sequence
Length = 574
Score = 206 bits (444), Expect = 9e-052
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2 / -3
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFG
Sbjct: 539 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFG 360
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 359 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 210
>gb|AV534641.1|AV534641 AV534641 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB083e07F 3', mRNA sequence
Length = 502
Score = 204 bits (441), Expect = 2e-051
Identities = 79/103 (76%), Positives = 93/103 (90%)
Frame = +2 / -1
Query: 245 LDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFM 424
L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFGWGRP+FM
Sbjct: 493 LVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFM 314
Query: 425 GPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
GPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 313 GPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 185
>gb|AV540733.1|AV540733 AV540733 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ154c11F 3', mRNA sequence
Length = 581
Score = 204 bits (440), Expect = 3e-051
Identities = 78/101 (77%), Positives = 92/101 (91%)
Frame = +2 / -1
Query: 251 RMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGP 430
RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFGWGRP+FMGP
Sbjct: 581 RMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGP 402
Query: 431 GGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
GGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 401 GGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 279
>gb|AV538890.1|AV538890 AV538890 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ123d02F 3', mRNA sequence
Length = 551
Score = 194 bits (419), Expect = 3e-048
Identities = 74/99 (74%), Positives = 89/99 (89%)
Frame = +2 / -1
Query: 257 DNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGG 436
D++Y RSALDYLE+QPDLSALVRGAHT++CP+LG+TSWVRLPI+DADFGWGRP+FMGPGG
Sbjct: 551 DDNYLRSALDYLEMQPDLSALVRGAHTYKCPSLGITSWVRLPIYDADFGWGRPIFMGPGG 372
Query: 437 IAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 371 SPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 255
>gb|AV546668.1|AV546668 AV546668 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL17g04F 3', mRNA sequence
Length = 524
Score = 172 bits (370), Expect = 1e-041
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +2 / -3
Query: 302 PDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANG 481
PDLSALVRGAHT++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS
Sbjct: 522 PDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTN 343
Query: 482 DGSLSIAISLQAEHMEKFRKLIGE 553
DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 342 DGSLSVAIALQSEHMKLFEKFLFE 271
>gb|BP615775.1|BP615775 BP615775 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-17-D12 3',
mRNA sequence
Length = 439
Score = 172 bits (370), Expect = 1e-041
Identities = 65/86 (75%), Positives = 77/86 (89%)
Frame = +2 / -3
Query: 296 LQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSA 475
+QPDLSALV GAHT++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS
Sbjct: 437 MQPDLSALVPGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSP 258
Query: 476 NGDGSLSIAISLQAEHMEKFRKLIGE 553
DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 257 TNDGSLSVAIALQSEHMKLFEKFLFE 180
>emb|BX829493.1|CNS0A26N Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB17ZB12 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1561
Score = 100 bits (213), Expect(2) = 3e-041
Identities = 41/67 (61%), Positives = 50/67 (74%)
Frame = +2 / +1
Query: 11 FSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAE 190
+S+Y +LA HVW+ V AR LP +Q TKLY ATDGR L+P LP GYF N+IFTATPLA
Sbjct: 784 YSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFVNLIFTATPLAV 963
Query: 191 AGKVTSE 211
AG + S+
Sbjct: 964 AGDLLSK 984
Score = 90.9 bits (192), Expect(2) = 3e-041
Identities = 47/94 (50%), Positives = 58/94 (61%)
Frame = +2 / +1
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDY E+QPDLSAL RG T + P G TS R P+++AD G
Sbjct: 1000 AGQIHDFLVRMDDNYLRSALDYREMQPDLSALGRGEQTDKGPKGGRTSGGRGPMYEAD*G 1179
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAI 505
GRP GPGG EG A P +GS ++A+
Sbjct: 1180 GGRPSGRGPGGRPDEGGAGGRPRPTKEGSGAVAM 1281
>gb|AV785581.1|AV785581 AV785581 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-67-G22 3',
mRNA sequence
Length = 428
Score = 169 bits (363), Expect = 1e-040
Identities = 64/83 (77%), Positives = 75/83 (90%)
Frame = +2 / -1
Query: 305 DLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGD 484
DLSALVRGAHT++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS D
Sbjct: 428 DLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTND 249
Query: 485 GSLSIAISLQAEHMEKFRKLIGE 553
GSLS+AI+LQ+EHM+ F K + E
Sbjct: 248 GSLSVAIALQSEHMKLFEKFLFE 180
>gb|AV518079.1|AV518079 AV518079 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD07f04F 3', mRNA
sequence
Length = 443
Score = 169 bits (363), Expect = 1e-040
Identities = 64/83 (77%), Positives = 75/83 (90%)
Frame = +2 / -1
Query: 305 DLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGD 484
DLSALVRGAHT++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS D
Sbjct: 443 DLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTND 264
Query: 485 GSLSIAISLQAEHMEKFRKLIGE 553
GSLS+AI+LQ+EHM+ F K + E
Sbjct: 263 GSLSVAIALQSEHMKLFEKFLFE 195
>gb|BP606194.1|BP606194 BP606194 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-69-P22 3',
mRNA sequence
Length = 430
Score = 169 bits (363), Expect = 1e-040
Identities = 64/83 (77%), Positives = 75/83 (90%)
Frame = +2 / -3
Query: 305 DLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGD 484
DLSALVRGAHT++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS D
Sbjct: 428 DLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTND 249
Query: 485 GSLSIAISLQAEHMEKFRKLIGE 553
GSLS+AI+LQ+EHM+ F K + E
Sbjct: 248 GSLSVAIALQSEHMKLFEKFLFE 180
>gb|AV563393.1|AV563393 AV563393 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ186e11F 3', mRNA sequence
Length = 517
Score = 166 bits (357), Expect = 9e-040
Identities = 63/82 (76%), Positives = 74/82 (90%)
Frame = +2 / -2
Query: 308 LSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDG 487
LSALVRGAHT++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS DG
Sbjct: 516 LSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDG 337
Query: 488 SLSIAISLQAEHMEKFRKLIGE 553
SLS+AI+LQ+EHM+ F K + E
Sbjct: 336 SLSVAIALQSEHMKLFEKFLFE 271
>gb|BP636486.1|BP636486 BP636486 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-04-K20 3',
mRNA sequence
Length = 443
Score = 139 bits (299), Expect(2) = 1e-037
Identities = 52/71 (73%), Positives = 62/71 (87%)
Frame = +2 / -1
Query: 341 RCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAE 520
+CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS D SLS+AI+LQ+E
Sbjct: 392 QCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDASLSVAIALQSE 213
Query: 521 HMEKFRKLIGE 553
HM+ F K + E
Sbjct: 212 HMKLFEKFLFE 180
Score = 39.6 bits (80), Expect(2) = 1e-037
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2 / -2
Query: 290 LELQPDLSALVRGAHTF 340
LE+QPDLSALVRGAHT+
Sbjct: 442 LEMQPDLSALVRGAHTY 392
>gb|AV559259.1|AV559259 AV559259 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ114a03F 3', mRNA sequence
Length = 514
Score = 159 bits (341), Expect = 1e-037
Identities = 61/81 (75%), Positives = 71/81 (87%)
Frame = +2 / -2
Query: 311 SALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGS 490
SALVRGAHT +CPNLG+TSWV LPI+DADFGWGRP+FMGPGGI YEGL+FVLPS DGS
Sbjct: 513 SALVRGAHTNKCPNLGITSWVSLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGS 334
Query: 491 LSIAISLQAEHMEKFRKLIGE 553
LS+AI+LQ+EHM+ F K + E
Sbjct: 333 LSVAIALQSEHMKLFEKFLFE 271
>gb|BP790265.1|BP790265 BP790265 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-42-H11 3',
mRNA sequence
Length = 421
Score = 155 bits (334), Expect = 1e-036
Identities = 58/78 (74%), Positives = 69/78 (88%)
Frame = +2 / -3
Query: 320 VRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSI 499
V GAHT++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS DGSLS+
Sbjct: 419 VPGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSV 240
Query: 500 AISLQAEHMEKFRKLIGE 553
AI+LQ+EHM+ F K + E
Sbjct: 239 AIALQSEHMKLFEKFLFE 186
>gb|BP567805.1|BP567805 BP567805 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-59-H18 3',
mRNA sequence
Length = 408
Score = 155 bits (332), Expect = 3e-036
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = +2 / -2
Query: 326 GAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAI 505
GAHT++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS DGSLS+AI
Sbjct: 407 GAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAI 228
Query: 506 SLQAEHMEKFRKLIGE 553
+LQ+EHM+ F K + E
Sbjct: 227 ALQSEHMKLFEKFLFE 180
>gb|AV796296.1|AV796296 AV796296 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-07-F17 3',
mRNA sequence
Length = 430
Score = 92.7 bits (196), Expect(2) = 1e-035
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = +2 / -3
Query: 404 WGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHMEKFRKLIGE 553
WGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+EHM+ F K + E
Sbjct: 329 WGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFE 180
Score = 79.9 bits (168), Expect(2) = 1e-035
Identities = 29/33 (87%), Positives = 33/33 (100%)
Frame = +2 / -1
Query: 302 PDLSALVRGAHTFRCPNLGLTSWVRLPIHDADF 400
PDLSALVRGAHT++CPNLG+TSWVRLPI+DADF
Sbjct: 430 PDLSALVRGAHTYKCPNLGITSWVRLPIYDADF 332
>ref|NM_127464.2| Arabidopsis thaliana unknown protein AT2G19070 mRNA, complete cds
Length = 1530
Score = 86.3 bits (182), Expect(3) = 2e-035
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +2 / +1
Query: 347 PNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHM 526
PNLG+ SW+ LP++ DFGWG+ + GPG ++G + +LP N DGS+ +A LQ HM
Sbjct: 1168 PNLGVVSWLTLPMYGLDFGWGKEFYTGPGTHDFDGDSLILPDQNEDGSVILATCLQVAHM 1347
Query: 527 EKFRK 541
E F+K
Sbjct: 1348 EAFKK 1362
Score = 72.1 bits (151), Expect(3) = 2e-035
Identities = 28/69 (40%), Positives = 37/69 (53%)
Frame = +2 / +1
Query: 2 APRFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATP 181
A F+ Y + HVW+C AR PEQPT L D R ++PPLP GYFGN
Sbjct: 799 AKGFTRYETVTGHVWRCACKARGHSPEQPTALGICIDTRSRMEPPLPRGYFGNATLDVVA 978
Query: 182 LAEAGKVTS 208
+ +G++ S
Sbjct: 979 ASTSGELIS 1005
Score = 31.3 bits (62), Expect(3) = 2e-035
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2 / +1
Query: 200 VTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPDL 310
+++EL A++I A+ + N+Y ++YL+ Q DL
Sbjct: 1000 ISNELGFAASLISKAIKNVTNEYVMIGIEYLKNQKDL 1110
>gb|BT002975.1| Arabidopsis thaliana clone RAFL15-09-N24 (R20482) putative
anthranilate N-hydroxycinnamoyl/benzoyltransferase
(At2g19070) mRNA, complete cds
Length = 1513
Score = 86.3 bits (182), Expect(3) = 2e-035
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +2 / +1
Query: 347 PNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHM 526
PNLG+ SW+ LP++ DFGWG+ + GPG ++G + +LP N DGS+ +A LQ HM
Sbjct: 1168 PNLGVVSWLTLPMYGLDFGWGKEFYTGPGTHDFDGDSLILPDQNEDGSVILATCLQVAHM 1347
Query: 527 EKFRK 541
E F+K
Sbjct: 1348 EAFKK 1362
Score = 72.1 bits (151), Expect(3) = 2e-035
Identities = 28/69 (40%), Positives = 37/69 (53%)
Frame = +2 / +1
Query: 2 APRFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATP 181
A F+ Y + HVW+C AR PEQPT L D R ++PPLP GYFGN
Sbjct: 799 AKGFTRYETVTGHVWRCACKARGHSPEQPTALGICIDTRSRMEPPLPRGYFGNATLDVVA 978
Query: 182 LAEAGKVTS 208
+ +G++ S
Sbjct: 979 ASTSGELIS 1005
Score = 31.3 bits (62), Expect(3) = 2e-035
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2 / +1
Query: 200 VTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPDL 310
+++EL A++I A+ + N+Y ++YL+ Q DL
Sbjct: 1000 ISNELGFAASLISKAIKNVTNEYVMIGIEYLKNQKDL 1110
>emb|BX819245.1|CNS0A9WZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB5ZE09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1428
Score = 86.3 bits (182), Expect(3) = 2e-035
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +2 / +1
Query: 347 PNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHM 526
PNLG+ SW+ LP++ DFGWG+ + GPG ++G + +LP N DGS+ +A LQ HM
Sbjct: 1144 PNLGVVSWLTLPMYGLDFGWGKEFYTGPGTHDFDGDSLILPDQNEDGSVILATCLQVAHM 1323
Query: 527 EKFRK 541
E F+K
Sbjct: 1324 EAFKK 1338
Score = 72.1 bits (151), Expect(3) = 2e-035
Identities = 28/69 (40%), Positives = 37/69 (53%)
Frame = +2 / +1
Query: 2 APRFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATP 181
A F+ Y + HVW+C AR PEQPT L D R ++PPLP GYFGN
Sbjct: 775 AKGFTRYETVTGHVWRCACKARGHSPEQPTALGICIDTRSRMEPPLPRGYFGNATLDVVA 954
Query: 182 LAEAGKVTS 208
+ +G++ S
Sbjct: 955 ASTSGELIS 981
Score = 31.3 bits (62), Expect(3) = 2e-035
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2 / +1
Query: 200 VTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPDL 310
+++EL A++I A+ + N+Y ++YL+ Q DL
Sbjct: 976 ISNELGFAASLISKAIKNVTNEYVMIGIEYLKNQKDL 1086
>gb|BT004456.1| Arabidopsis thaliana clone U20482 putative anthranilate
N-hydroxycinnamoyl/benzoyltransferase (At2g19070) mRNA,
complete cds
Length = 1387
Score = 86.3 bits (182), Expect(3) = 2e-035
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +2 / +1
Query: 347 PNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHM 526
PNLG+ SW+ LP++ DFGWG+ + GPG ++G + +LP N DGS+ +A LQ HM
Sbjct: 1141 PNLGVVSWLTLPMYGLDFGWGKEFYTGPGTHDFDGDSLILPDQNEDGSVILATCLQVAHM 1320
Query: 527 EKFRK 541
E F+K
Sbjct: 1321 EAFKK 1335
Score = 72.1 bits (151), Expect(3) = 2e-035
Identities = 28/69 (40%), Positives = 37/69 (53%)
Frame = +2 / +1
Query: 2 APRFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATP 181
A F+ Y + HVW+C AR PEQPT L D R ++PPLP GYFGN
Sbjct: 772 AKGFTRYETVTGHVWRCACKARGHSPEQPTALGICIDTRSRMEPPLPRGYFGNATLDVVA 951
Query: 182 LAEAGKVTS 208
+ +G++ S
Sbjct: 952 ASTSGELIS 978
Score = 31.3 bits (62), Expect(3) = 2e-035
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2 / +1
Query: 200 VTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPDL 310
+++EL A++I A+ + N+Y ++YL+ Q DL
Sbjct: 973 ISNELGFAASLISKAIKNVTNEYVMIGIEYLKNQKDL 1083
>gb|BP782561.1|BP782561 BP782561 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-82-L04 3',
mRNA sequence
Length = 403
Score = 150 bits (322), Expect = 6e-035
Identities = 55/74 (74%), Positives = 66/74 (89%)
Frame = +2 / -3
Query: 332 HTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISL 511
HT++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+L
Sbjct: 401 HTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIAL 222
Query: 512 QAEHMEKFRKLIGE 553
Q+EHM+ F K + E
Sbjct: 221 QSEHMKLFEKFLFE 180
>gb|AV788842.1|AV788842 AV788842 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-81-D12 3',
mRNA sequence
Length = 416
Score = 149 bits (319), Expect = 2e-034
Identities = 55/69 (79%), Positives = 65/69 (94%)
Frame = +2 / -3
Query: 314 ALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSL 493
ALVRGAHT++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS DGSL
Sbjct: 414 ALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSL 235
Query: 494 SIAISLQAE 520
S+AI+LQ++
Sbjct: 234 SVAIALQSD 208
>gb|BP577707.1|BP577707 BP577707 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-97-M12 3',
mRNA sequence
Length = 407
Score = 145 bits (311), Expect = 2e-033
Identities = 54/75 (72%), Positives = 65/75 (86%)
Frame = +2 / -1
Query: 329 AHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAIS 508
AHT++CPNLG+TSWVRLPI+DADFGW RP+FMGPGGI YEGL+FVLP DGSLS+AI+
Sbjct: 404 AHTYKCPNLGITSWVRLPIYDADFGWVRPIFMGPGGIPYEGLSFVLPIPTNDGSLSVAIA 225
Query: 509 LQAEHMEKFRKLIGE 553
LQ+EHM+ F K + E
Sbjct: 224 LQSEHMKLFEKFLFE 180
>gb|AV522470.1|AV522470 AV522470 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ80g07F 3', mRNA
sequence
Length = 395
Score = 144 bits (309), Expect = 4e-033
Identities = 53/72 (73%), Positives = 64/72 (88%)
Frame = +2 / -1
Query: 338 FRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQA 517
++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+
Sbjct: 395 YKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQS 216
Query: 518 EHMEKFRKLIGE 553
EHM+ F K + E
Sbjct: 215 EHMKLFEKFLFE 180
>gb|AV538914.1|AV538914 AV538914 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ124b06F 3', mRNA sequence
Length = 486
Score = 144 bits (309), Expect = 4e-033
Identities = 53/72 (73%), Positives = 64/72 (88%)
Frame = +2 / -1
Query: 338 FRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQA 517
++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS DGSLS+AI+LQ+
Sbjct: 486 YKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQS 307
Query: 518 EHMEKFRKLIGE 553
EHM+ F K + E
Sbjct: 306 EHMKLFEKFLFE 271
>emb|AL081523.1|CNS00N6D Arabidopsis thaliana genome survey sequence T7 end of BAC F3C21 of
IGF library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 335
Score = 89.0 bits (188), Expect(2) = 4e-033
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = +2 / -2
Query: 29 LAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATPLAEAGKVTS 208
LA HV + V AR LP +Q TKLY ATD R L+P LP GYFGNVIFTATPLA AG + S
Sbjct: 334 LAGHVCRSVGKARGLPNDQETKLYIATDVRSRLRPQLPPGYFGNVIFTATPLAVAGDLLS 155
Query: 209 E 211
+
Sbjct: 154 K 152
Score = 75.3 bits (158), Expect(2) = 4e-033
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +2 / -2
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLG 358
A I + RMD++Y RSALDYLE+QPDLSA V GAHT++CPNLG
Sbjct: 136 AGQIHDFMVRMDDNYLRSALDYLEMQPDLSAHVHGAHTYKCPNLG 2
>gb|BP641359.1|BP641359 BP641359 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-54-P15 3',
mRNA sequence
Length = 461
Score = 136 bits (292), Expect(2) = 6e-032
Identities = 52/68 (76%), Positives = 60/68 (88%)
Frame = +2 / -2
Query: 224 AAVIQGALDRMDNDYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFG 403
A I L RMD++Y RSALDYLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+D DFG
Sbjct: 403 AGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDPDFG 224
Query: 404 WGRPVFMG 427
WGRP+FMG
Sbjct: 223 WGRPIFMG 200
Score = 23.5 bits (45), Expect(2) = 6e-032
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2 / -2
Query: 443 YEGLAFVLPSANGDGSLSIAISLQAEHMEKFR 538
YEGL+FVLP + I + + ++E +
Sbjct: 181 YEGLSFVLPKVLLNDGQLIRLPIAPPNLEHMK 86
>gb|AC002392.3| Arabidopsis thaliana chromosome 2 clone T20K24 map CIC06E08, complete
sequence
Length = 105528
Score = 86.3 bits (182), Expect(3) = 2e-029
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +2 / -3
Query: 347 PNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHM 526
PNLG+ SW+ LP++ DFGWG+ + GPG ++G + +LP N DGS+ +A LQ HM
Sbjct: 20668 PNLGVVSWLTLPMYGLDFGWGKEFYTGPGTHDFDGDSLILPDQNEDGSVILATCLQVAHM 20489
Query: 527 EKFRK 541
E F+K
Sbjct: 20488 EAFKK 20474
Score = 69.8 bits (146), Expect(3) = 2e-029
Identities = 27/65 (41%), Positives = 34/65 (52%)
Frame = +2 / -2
Query: 2 APRFSTYAVLAAHVWKCVSLARSLPPEQPTKLYCATDGRQTLQPPLPDGYFGNVIFTATP 181
A F+ Y + HVW+C AR PEQPT L D R ++PPLP GYFGN
Sbjct: 21455 AKGFTRYETVTGHVWRCACKARGHSPEQPTALGICIDTRSRMEPPLPRGYFGNATLDVVA 21276
Query: 182 LAEAG 196
+ +G
Sbjct: 21275 ASTSG 21261
Score = 31.3 bits (62), Expect(3) = 2e-029
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2 / -3
Query: 200 VTSELAEGAAVIQGALDRMDNDYCRSALDYLELQPDL 310
+++EL A++I A+ + N+Y ++YL+ Q DL
Sbjct: 20836 ISNELGFAASLISKAIKNVTNEYVMIGIEYLKNQKDL 20726
>gb|BP582098.1|BP582098 BP582098 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-34-N01 3',
mRNA sequence
Length = 464
Score = 102 bits (217), Expect(2) = 9e-029
Identities = 37/45 (82%), Positives = 44/45 (97%)
Frame = +2 / -3
Query: 290 LELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFM 424
LE+QPDLSALVRGA+T++CPNLG+TSWVRLPI+ ADFGWGRP+FM
Sbjct: 444 LEMQPDLSALVRGANTYKCPNLGITSWVRLPIYYADFGWGRPIFM 310
Score = 47.3 bits (97), Expect(2) = 9e-029
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +2 / -2
Query: 407 GRPVFMGPGGIAYEGLAFVLPSANGDGSLS 496
G GPGGI YEGL+FV+PS DGSLS
Sbjct: 328 GSSYLYGPGGIPYEGLSFVVPSHTNDGSLS 239
>gb|BP568729.1|BP568729 BP568729 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-63-E19 3',
mRNA sequence
Length = 452
Score = 62.5 bits (130), Expect(3) = 3e-028
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2 / -1
Query: 407 GRPVFMGPGGIAYEGLAFVLPSANGDGSLSIAISLQAEHM 526
G GPGGI YEGL+FVLPS DGSLS+AI+L +EH+
Sbjct: 317 GSSYLYGPGGIPYEGLSFVLPSPTNDGSLSLAIALPSEHI 198
Score = 56.1 bits (116), Expect(3) = 3e-028
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +2 / -1
Query: 281 LDYLELQPDLSALVRGAHTFRCPNLGLTS 367
L LE+QPDLSALV GAHT++CPNLG+T+
Sbjct: 440 LTSLEMQPDLSALVPGAHTYKCPNLGITA 354
Score = 47.3 bits (97), Expect(3) = 3e-028
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2 / -2
Query: 371 VRLPIHDADFGWGRPVFM 424
VRLPI+DADFGWGRP+FM
Sbjct: 352 VRLPIYDADFGWGRPIFM 299
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,870,410,640
Number of Sequences: 1013581
Number of extensions: 27286643
Number of successful extensions: 167962
Number of sequences better than 1.0e-020: 62
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 58600301452
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)