TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2576612.2.1
(845 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV537607.1|AV537607 AV537607 Arabidopsis thaliana roots ... 313 4e-084
gb|AV544220.1|AV544220 AV544220 Arabidopsis thaliana roots ... 313 4e-084
gb|AV549585.1|AV549585 AV549585 Arabidopsis thaliana roots ... 313 4e-084
gb|AY050966.1| Arabidopsis thaliana putative ribosomal prot... 313 4e-084
gb|AY096616.1| Arabidopsis thaliana putative ribosomal prot... 313 4e-084
gb|AY085630.1| Arabidopsis thaliana clone 164 mRNA, complet... 313 4e-084
ref|NM_120988.2| Arabidopsis thaliana structural constituen... 313 4e-084
gb|BE039272.1|BE039272 AC01D03 AC Arabidopsis thaliana cDNA... 312 8e-084
gb|AV826432.1|AV826432 AV826432 RAFL8 Arabidopsis thaliana ... 312 8e-084
gb|AV553671.1|AV553671 AV553671 Arabidopsis thaliana roots ... 312 1e-083
gb|AV784120.1|AV784120 AV784120 RAFL5 Arabidopsis thaliana ... 308 1e-082
gb|AV823191.1|AV823191 AV823191 RAFL5 Arabidopsis thaliana ... 308 1e-082
gb|CA781266.1|CA781266 014B04AF Infected Arabidopsis Leaf A... 308 1e-082
gb|AV544758.1|AV544758 AV544758 Arabidopsis thaliana roots ... 308 1e-082
gb|AV553255.1|AV553255 AV553255 Arabidopsis thaliana roots ... 308 1e-082
gb|AY048221.1| Arabidopsis thaliana At1g04270/F19P19_29 mRN... 308 1e-082
gb|AY091703.1| Arabidopsis thaliana At1g04270/F19P19_29 mRN... 308 1e-082
emb|BX817406.1|CNS0ACK0 Arabidopsis thaliana Full-length cD... 308 1e-082
emb|Z23161.1|ATRBPS15A A.thaliana ribosomal protein S15 mRN... 308 1e-082
ref|NM_100308.2| Arabidopsis thaliana RPS15 (RIBOSOMAL PROT... 308 1e-082
emb|X91962.1|AT40SRS15 A.thaliana mRNA for 40S ribosomal pr... 307 3e-082
gb|BE037545.1|BE037545 AA01A06 AA Arabidopsis thaliana cDNA... 307 4e-082
gb|BE038613.1|BE038613 AB01H05 AB Arabidopsis thaliana cDNA... 307 4e-082
gb|BE038861.1|BE038861 AB05B09 AB Arabidopsis thaliana cDNA... 303 4e-081
ref|NM_120987.2| Arabidopsis thaliana structural constituen... 302 9e-081
gb|AU235816.1|AU235816 AU235816 RAFL14 Arabidopsis thaliana... 302 1e-080
gb|AV538711.1|AV538711 AV538711 Arabidopsis thaliana roots ... 299 8e-080
gb|BT010135.1| Arabidopsis thaliana At5g09500 gene, complet... 299 8e-080
gb|AV538084.1|AV538084 AV538084 Arabidopsis thaliana roots ... 294 2e-078
ref|NM_123730.1| Arabidopsis thaliana structural constituen... 291 3e-077
ref|NM_001035879.1| Arabidopsis thaliana RPS15 (RIBOSOMAL P... 193 3e-077
gb|AY086958.1| Arabidopsis thaliana clone 29963 mRNA, compl... 290 5e-077
ref|NM_120986.2| Arabidopsis thaliana structural constituen... 290 5e-077
gb|BE038827.1|BE038827 AB04G03 AB Arabidopsis thaliana cDNA... 272 2e-076
emb|Z23162.1|ATRBPS15B A.thaliana H1flk-3 gene, 3' end, and... 195 5e-072
gb|AV536604.1|AV536604 AV536604 Arabidopsis thaliana liquid... 267 3e-070
gb|AV545466.1|AV545466 AV545466 Arabidopsis thaliana roots ... 267 4e-070
emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5... 199 7e-070
gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsi... 195 7e-069
gb|AV553829.1|AV553829 AV553829 Arabidopsis thaliana roots ... 217 1e-067
gb|AV565619.1|AV565619 AV565619 Arabidopsis thaliana green ... 253 5e-066
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 195 1e-064
gb|N37540.1|N37540 18767 Lambda-PRL2 Arabidopsis thaliana c... 247 3e-064
gb|BP582590.1|BP582590 BP582590 RAFL14 Arabidopsis thaliana... 246 8e-064
gb|BP619574.1|BP619574 BP619574 RAFL16 Arabidopsis thaliana... 246 8e-064
dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosom... 182 2e-063
gb|AW004145.1|AW004145 701500185 A. thaliana, Ohio State cl... 200 1e-062
gb|AV532062.1|AV532062 AV532062 Arabidopsis thaliana flower... 237 5e-061
gb|BP594448.1|BP594448 BP594448 RAFL15 Arabidopsis thaliana... 223 4e-060
gb|BP618355.1|BP618355 BP618355 RAFL16 Arabidopsis thaliana... 160 4e-060
gb|AA712740.1|AA712740 32299 Lambda-PRL2 Arabidopsis thalia... 209 7e-060
gb|BE038972.1|BE038972 AB07H11 AB Arabidopsis thaliana cDNA... 228 2e-058
gb|BP584508.1|BP584508 BP584508 RAFL14 Arabidopsis thaliana... 228 2e-058
gb|T21856.1|T21856 3864 Lambda-PRL2 Arabidopsis thaliana cD... 225 2e-057
gb|BP607962.1|BP607962 BP607962 RAFL16 Arabidopsis thaliana... 220 6e-056
gb|BP571507.1|BP571507 BP571507 RAFL14 Arabidopsis thaliana... 213 5e-054
gb|BP593823.1|BP593823 BP593823 RAFL15 Arabidopsis thaliana... 211 3e-053
gb|BP836703.1|BP836703 BP836703 RAFL19 Arabidopsis thaliana... 208 2e-052
gb|AV530843.1|AV530843 AV530843 Arabidopsis thaliana flower... 207 3e-052
gb|AA597749.1|AA597749 29333 Lambda-PRL2 Arabidopsis thalia... 207 4e-052
gb|BP855680.1|BP855680 BP855680 RAFL21 Arabidopsis thaliana... 205 2e-051
gb|BP646287.1|BP646287 BP646287 RAFL19 Arabidopsis thaliana... 146 2e-051
gb|BP570282.1|BP570282 BP570282 RAFL14 Arabidopsis thaliana... 193 3e-050
gb|BP854001.1|BP854001 BP854001 RAFL21 Arabidopsis thaliana... 200 5e-050
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 199 7e-050
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 199 7e-050
dbj|AB008265.1| Arabidopsis thaliana genomic DNA, chromosom... 118 1e-049
gb|DQ056736.1| Arabidopsis thaliana putative 40S ribosomal ... 118 1e-049
ref|NM_125701.1| Arabidopsis thaliana structural constituen... 118 1e-049
gb|BP787497.1|BP787497 BP787497 RAFL7 Arabidopsis thaliana ... 197 5e-049
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 195 2e-048
gb|BP642003.1|BP642003 BP642003 RAFL19 Arabidopsis thaliana... 193 6e-048
gb|BP853164.1|BP853164 BP853164 RAFL21 Arabidopsis thaliana... 95 1e-047
gb|BP853893.1|BP853893 BP853893 RAFL21 Arabidopsis thaliana... 191 3e-047
gb|BP563336.1|BP563336 BP563336 RAFL14 Arabidopsis thaliana... 190 4e-047
gb|BP597545.1|BP597545 BP597545 RAFL15 Arabidopsis thaliana... 189 8e-047
gb|AA713022.1|AA713022 32584 Lambda-PRL2 Arabidopsis thalia... 188 1e-046
gb|BP595618.1|BP595618 BP595618 RAFL15 Arabidopsis thaliana... 188 1e-046
gb|BP789183.1|BP789183 BP789183 RAFL7 Arabidopsis thaliana ... 188 1e-046
gb|BZ292978.1|BZ292978 SALK_129050.48.35.x Arabidopsis thal... 106 3e-046
gb|BP844146.1|BP844146 BP844146 RAFL21 Arabidopsis thaliana... 187 4e-046
gb|AU226581.1|AU226581 AU226581 RAFL14 Arabidopsis thaliana... 127 7e-046
gb|R29788.1|R29788 12393 Lambda-PRL2 Arabidopsis thaliana c... 186 7e-046
gb|BP812124.1|BP812124 BP812124 RAFL19 Arabidopsis thaliana... 186 7e-046
gb|BP840222.1|BP840222 BP840222 RAFL19 Arabidopsis thaliana... 186 7e-046
emb|AJ553533.1|ATH553533 Arabidopsis thaliana T-DNA flankin... 185 1e-045
gb|BP640396.1|BP640396 BP640396 RAFL19 Arabidopsis thaliana... 112 2e-045
gb|BP799430.1|BP799430 BP799430 RAFL14 Arabidopsis thaliana... 169 2e-045
gb|BP583991.1|BP583991 BP583991 RAFL14 Arabidopsis thaliana... 184 3e-045
gb|BP638304.1|BP638304 BP638304 RAFL19 Arabidopsis thaliana... 184 3e-045
gb|BP566550.1|BP566550 BP566550 RAFL14 Arabidopsis thaliana... 182 1e-044
gb|AQ956828.1|AQ956828 LERAM31TF LERA Arabidopsis thaliana ... 181 2e-044
gb|BP865592.1|BP865592 BP865592 RAFL21 Arabidopsis thaliana... 181 2e-044
gb|BP827322.1|BP827322 BP827322 RAFL19 Arabidopsis thaliana... 117 1e-043
gb|N65110.1|N65110 20150 Lambda-PRL2 Arabidopsis thaliana c... 152 2e-043
gb|BP849184.1|BP849184 BP849184 RAFL21 Arabidopsis thaliana... 175 2e-043
gb|BP566825.1|BP566825 BP566825 RAFL14 Arabidopsis thaliana... 178 2e-043
gb|AQ956829.1|AQ956829 LERAM31TR LERA Arabidopsis thaliana ... 177 6e-043
gb|CB260534.1|CB260534 87-E9572-012-004-N21-T7R MPIZ-ADIS-0... 176 1e-042
gb|BP671919.1|BP671919 BP671919 RAFL21 Arabidopsis thaliana... 155 2e-042
gb|AV550232.1|AV550232 AV550232 Arabidopsis thaliana roots ... 174 4e-042
gb|BP654930.1|BP654930 BP654930 RAFL19 Arabidopsis thaliana... 173 7e-042
gb|BP799546.1|BP799546 BP799546 RAFL14 Arabidopsis thaliana... 129 2e-041
gb|BP799355.1|BP799355 BP799355 RAFL14 Arabidopsis thaliana... 160 2e-041
gb|BH251399.1|BH251399 SALK_011527 Arabidopsis thaliana TDN... 149 3e-041
gb|BP815278.1|BP815278 BP815278 RAFL19 Arabidopsis thaliana... 151 4e-041
gb|BP642920.1|BP642920 BP642920 RAFL19 Arabidopsis thaliana... 170 7e-041
gb|BP856362.1|BP856362 BP856362 RAFL21 Arabidopsis thaliana... 170 7e-041
gb|BP861190.1|BP861190 BP861190 RAFL21 Arabidopsis thaliana... 167 3e-040
gb|BP644772.1|BP644772 BP644772 RAFL19 Arabidopsis thaliana... 148 4e-040
gb|BP815011.1|BP815011 BP815011 RAFL19 Arabidopsis thaliana... 119 4e-040
gb|AV552702.1|AV552702 AV552702 Arabidopsis thaliana roots ... 167 4e-040
gb|BP590157.1|BP590157 BP590157 RAFL15 Arabidopsis thaliana... 98 2e-039
gb|BP647548.1|BP647548 BP647548 RAFL19 Arabidopsis thaliana... 101 3e-039
gb|AV551020.1|AV551020 AV551020 Arabidopsis thaliana roots ... 164 3e-039
gb|BP663835.1|BP663835 BP663835 RAFL21 Arabidopsis thaliana... 164 3e-039
gb|BP797747.1|BP797747 BP797747 RAFL14 Arabidopsis thaliana... 164 3e-039
gb|BP832293.1|BP832293 BP832293 RAFL19 Arabidopsis thaliana... 164 3e-039
gb|BP818160.1|BP818160 BP818160 RAFL19 Arabidopsis thaliana... 142 1e-038
gb|BP632732.1|BP632732 BP632732 RAFL17 Arabidopsis thaliana... 161 2e-038
gb|BP650819.1|BP650819 BP650819 RAFL19 Arabidopsis thaliana... 161 2e-038
gb|R30026.1|R30026 12631 Lambda-PRL2 Arabidopsis thaliana c... 142 2e-038
gb|BP651032.1|BP651032 BP651032 RAFL19 Arabidopsis thaliana... 161 3e-038
gb|BP644385.1|BP644385 BP644385 RAFL19 Arabidopsis thaliana... 133 3e-038
gb|BP803741.1|BP803741 BP803741 RAFL14 Arabidopsis thaliana... 115 4e-038
gb|AV535553.1|AV535553 AV535553 Arabidopsis thaliana flower... 159 1e-037
gb|BP592451.1|BP592451 BP592451 RAFL15 Arabidopsis thaliana... 159 1e-037
gb|BP822296.1|BP822296 BP822296 RAFL19 Arabidopsis thaliana... 159 1e-037
gb|BP564615.1|BP564615 BP564615 RAFL14 Arabidopsis thaliana... 158 3e-037
gb|BP644028.1|BP644028 BP644028 RAFL19 Arabidopsis thaliana... 158 3e-037
gb|BP855126.1|BP855126 BP855126 RAFL21 Arabidopsis thaliana... 111 3e-037
gb|BP638880.1|BP638880 BP638880 RAFL19 Arabidopsis thaliana... 157 4e-037
gb|BP844755.1|BP844755 BP844755 RAFL21 Arabidopsis thaliana... 156 7e-037
gb|BP564344.1|BP564344 BP564344 RAFL14 Arabidopsis thaliana... 110 2e-036
gb|AV536598.1|AV536598 AV536598 Arabidopsis thaliana liquid... 154 3e-036
gb|BP858904.1|BP858904 BP858904 RAFL21 Arabidopsis thaliana... 99 5e-036
gb|BP648711.1|BP648711 BP648711 RAFL19 Arabidopsis thaliana... 153 6e-036
gb|BP815140.1|BP815140 BP815140 RAFL19 Arabidopsis thaliana... 153 6e-036
gb|AV814593.1|AV814593 AV814593 RAFL9 Arabidopsis thaliana ... 153 8e-036
gb|BP805620.1|BP805620 BP805620 RAFL16 Arabidopsis thaliana... 77 2e-035
gb|AV790069.1|AV790069 AV790069 RAFL6 Arabidopsis thaliana ... 150 4e-035
gb|BP623778.1|BP623778 BP623778 RAFL17 Arabidopsis thaliana... 150 4e-035
gb|BP624306.1|BP624306 BP624306 RAFL17 Arabidopsis thaliana... 150 4e-035
gb|BP632135.1|BP632135 BP632135 RAFL17 Arabidopsis thaliana... 150 4e-035
gb|BP577470.1|BP577470 BP577470 RAFL14 Arabidopsis thaliana... 149 1e-034
gb|BP639587.1|BP639587 BP639587 RAFL19 Arabidopsis thaliana... 149 1e-034
gb|BP626011.1|BP626011 BP626011 RAFL17 Arabidopsis thaliana... 141 3e-034
gb|BP648892.1|BP648892 BP648892 RAFL19 Arabidopsis thaliana... 122 4e-034
gb|AV787809.1|AV787809 AV787809 RAFL6 Arabidopsis thaliana ... 145 2e-033
gb|BP630049.1|BP630049 BP630049 RAFL17 Arabidopsis thaliana... 145 2e-033
gb|BP657150.1|BP657150 BP657150 RAFL19 Arabidopsis thaliana... 114 4e-033
gb|BP797475.1|BP797475 BP797475 RAFL14 Arabidopsis thaliana... 105 4e-033
gb|N37263.1|N37263 18490 Lambda-PRL2 Arabidopsis thaliana c... 143 9e-033
gb|BP869065.1|BP869065 BP869065 RAFL21 Arabidopsis thaliana... 143 9e-033
gb|BP577273.1|BP577273 BP577273 RAFL14 Arabidopsis thaliana... 137 1e-032
gb|BP829369.1|BP829369 BP829369 RAFL19 Arabidopsis thaliana... 101 3e-032
gb|BP656135.1|BP656135 BP656135 RAFL19 Arabidopsis thaliana... 114 4e-032
gb|BP669875.1|BP669875 BP669875 RAFL21 Arabidopsis thaliana... 108 7e-032
gb|BP670504.1|BP670504 BP670504 RAFL21 Arabidopsis thaliana... 114 8e-032
gb|AV794154.1|AV794154 AV794154 RAFL8 Arabidopsis thaliana ... 84 2e-031
gb|BP569334.1|BP569334 BP569334 RAFL14 Arabidopsis thaliana... 94 2e-031
gb|BP625067.1|BP625067 BP625067 RAFL17 Arabidopsis thaliana... 128 4e-031
gb|BP592430.1|BP592430 BP592430 RAFL15 Arabidopsis thaliana... 55 7e-031
gb|BZ769940.1|BZ769940 SALK_142874.53.50.x Arabidopsis thal... 135 1e-030
gb|AV535648.1|AV535648 AV535648 Arabidopsis thaliana flower... 134 3e-030
gb|BP849172.1|BP849172 BP849172 RAFL21 Arabidopsis thaliana... 80 4e-030
gb|BP815658.1|BP815658 BP815658 RAFL19 Arabidopsis thaliana... 110 4e-030
gb|BP581489.1|BP581489 BP581489 RAFL14 Arabidopsis thaliana... 90 2e-029
gb|BP628741.1|BP628741 BP628741 RAFL17 Arabidopsis thaliana... 114 1e-028
gb|AV533902.1|AV533902 AV533902 Arabidopsis thaliana flower... 128 2e-028
gb|BP637705.1|BP637705 BP637705 RAFL19 Arabidopsis thaliana... 100 1e-027
gb|AV559935.1|AV559935 AV559935 Arabidopsis thaliana green ... 124 4e-027
gb|BP802394.1|BP802394 BP802394 RAFL14 Arabidopsis thaliana... 123 6e-027
gb|BP831675.1|BP831675 BP831675 RAFL19 Arabidopsis thaliana... 70 8e-027
gb|BP596175.1|BP596175 BP596175 RAFL15 Arabidopsis thaliana... 73 1e-026
gb|CB261315.1|CB261315 08-E9573-012-004-P02-T7R MPIZ-ADIS-0... 120 7e-026
gb|CB261515.1|CB261515 32-E020823-012-004-P02q-T7R MPIZ-ADI... 120 7e-026
gb|Z17791.1|Z17791 ATTS0365 Gif-SeedA+B Arabidopsis thalian... 120 7e-026
emb|AL755805.1| Arabidopsis thaliana T-DNA flanking sequenc... 118 2e-025
emb|AL755807.1| Arabidopsis thaliana T-DNA flanking sequenc... 117 4e-025
gb|T44160.1|T44160 7423 Lambda-PRL2 Arabidopsis thaliana cD... 116 7e-025
gb|BP831621.1|BP831621 BP831621 RAFL19 Arabidopsis thaliana... 90 1e-024
gb|BP826413.1|BP826413 BP826413 RAFL19 Arabidopsis thaliana... 101 9e-024
gb|BH214207.1|BH214207 SALK_010406 Arabidopsis thaliana TDN... 80 2e-023
emb|CR360807.1| Arabidopsis thaliana T-DNA flanking sequenc... 111 3e-023
ref|NM_103107.1| Arabidopsis thaliana structural constituen... 110 6e-023
gb|CD531488.1|CD531488 10P20 Arabidopsis Leaf Senescence Li... 109 1e-022
gb|BP802157.1|BP802157 BP802157 RAFL14 Arabidopsis thaliana... 106 1e-022
gb|BZ761659.1|BZ761659 SALK_074986.53.30.x Arabidopsis thal... 87 2e-022
gb|BP832815.1|BP832815 BP832815 RAFL19 Arabidopsis thaliana... 70 4e-022
emb|AL823727.1| Arabidopsis thaliana transposon insertion S... 92 7e-022
emb|CR360808.1| Arabidopsis thaliana T-DNA flanking sequenc... 105 2e-021
>gb|AV537607.1|AV537607 AV537607 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09f04F 3', mRNA sequence
Length = 602
Score = 313 bits (678), Expect = 4e-084
Identities = 128/152 (84%), Positives = 142/152 (93%)
Frame = +3 / -1
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 590 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 411
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 410 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 231
Query: 558 YKPVKHGRPGIGATHSSRFIPLK*VVTQICSV 653
YKPVKHGRPG+GATHSSRFIPLK* ++C V
Sbjct: 230 YKPVKHGRPGVGATHSSRFIPLK*RPYRVCVV 135
Score = 203 bits (438), Expect = 6e-051
Identities = 96/146 (65%), Positives = 100/146 (68%)
Frame = -2 / +1
Query: 652 TLQIWVTTHFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TP 473
T Q H RG+N EE VAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP
Sbjct: 136 TTQTLYGLHLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTP 315
Query: 472 TMLPIISGTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSW 293
MLPIISGTMIM +WV TGSGFSP GAS FALRSFL+ A+GFL PL NLL R KS
Sbjct: 316 MMLPIISGTMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSL 495
Query: 292 TRXXXXXXXXXXXSTPR*LYLRNVLF 215
TR STP NVLF
Sbjct: 496 TRSSVDMSRRASRSTPLKANFLNVLF 573
Score = 172 bits (371), Expect = 1e-041
Identities = 73/145 (50%), Positives = 98/145 (67%)
Frame = -1 / +3
Query: 647 TDLGNNSFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNN 468
TD +S +RD+P GV TN P VL+ LV +GELCK+++NHLRLDL+LVE L+IV TN+
Sbjct: 141 TDSVWSSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTND 320
Query: 467 APNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDE 288
A NH NDHV ++G HW WLL + FRLA+ L++ H L Q+ EPS EELD+
Sbjct: 321 ASNHFRHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDK 500
Query: 287 VVGGHVKQRIEVDAAVAVLAERPLL 213
++G HV++ IE+D+ ER LL
Sbjct: 501 IIGRHVEKSIEIDSFEGEFLERSLL 575
Score = 122 bits (262), Expect = 1e-026
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / -3
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
EAR SE+P +HDHC +DW+H WC+QW+D QP DQA*DDW L CRVLH +QA AR A
Sbjct: 384 EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS*AR*A 205
Query: 584 RYWCHSLLAVYPSEMSCYPDL 646
WC+ LL V+PS++ L
Sbjct: 204 WRWCYPLLQVHPSQVKTIQSL 142
>gb|AV544220.1|AV544220 AV544220 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ36d04F 3', mRNA sequence
Length = 658
Score = 313 bits (678), Expect = 4e-084
Identities = 128/152 (84%), Positives = 142/152 (93%)
Frame = +3 / -3
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 614 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 435
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 434 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 255
Query: 558 YKPVKHGRPGIGATHSSRFIPLK*VVTQICSV 653
YKPVKHGRPG+GATHSSRFIPLK* ++C V
Sbjct: 254 YKPVKHGRPGVGATHSSRFIPLK*RPYRVCVV 159
Score = 203 bits (438), Expect = 6e-051
Identities = 96/146 (65%), Positives = 100/146 (68%)
Frame = -2 / +1
Query: 652 TLQIWVTTHFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TP 473
T Q H RG+N EE VAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP
Sbjct: 160 TTQTLYGLHLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTP 339
Query: 472 TMLPIISGTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSW 293
MLPIISGTMIM +WV TGSGFSP GAS FALRSFL+ A+GFL PL NLL R KS
Sbjct: 340 MMLPIISGTMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSL 519
Query: 292 TRXXXXXXXXXXXSTPR*LYLRNVLF 215
TR STP NVLF
Sbjct: 520 TRSSVDMSRRASRSTPLKANFLNVLF 597
Score = 172 bits (371), Expect = 1e-041
Identities = 73/145 (50%), Positives = 98/145 (67%)
Frame = -1 / +3
Query: 647 TDLGNNSFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNN 468
TD +S +RD+P GV TN P VL+ LV +GELCK+++NHLRLDL+LVE L+IV TN+
Sbjct: 165 TDSVWSSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTND 344
Query: 467 APNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDE 288
A NH NDHV ++G HW WLL + FRLA+ L++ H L Q+ EPS EELD+
Sbjct: 345 ASNHFRHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDK 524
Query: 287 VVGGHVKQRIEVDAAVAVLAERPLL 213
++G HV++ IE+D+ ER LL
Sbjct: 525 IIGRHVEKSIEIDSFEGEFLERSLL 599
Score = 122 bits (262), Expect(2) = 6e-027
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / -2
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
EAR SE+P +HDHC +DW+H WC+QW+D QP DQA*DDW L CRVLH +QA AR A
Sbjct: 408 EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS*AR*A 229
Query: 584 RYWCHSLLAVYPSEMSCYPDL 646
WC+ LL V+PS++ L
Sbjct: 228 WRWCYPLLQVHPSQVKTIQSL 166
Score = 22.6 bits (43), Expect(2) = 6e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / -3
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 635 DVEPEVAAAGVPKK 594
>gb|AV549585.1|AV549585 AV549585 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09f04R 5', mRNA sequence
Length = 562
Score = 313 bits (678), Expect = 4e-084
Identities = 128/152 (84%), Positives = 142/152 (93%)
Frame = +3 / +1
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 73 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 252
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 253 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 432
Query: 558 YKPVKHGRPGIGATHSSRFIPLK*VVTQICSV 653
YKPVKHGRPG+GATHSSRFIPLK* ++C V
Sbjct: 433 YKPVKHGRPGVGATHSSRFIPLK*RPYRVCVV 528
Score = 203 bits (438), Expect = 6e-051
Identities = 96/146 (65%), Positives = 100/146 (68%)
Frame = -2 / -3
Query: 652 TLQIWVTTHFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TP 473
T Q H RG+N EE VAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP
Sbjct: 527 TTQTLYGLHLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTP 348
Query: 472 TMLPIISGTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSW 293
MLPIISGTMIM +WV TGSGFSP GAS FALRSFL+ A+GFL PL NLL R KS
Sbjct: 347 MMLPIISGTMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSL 168
Query: 292 TRXXXXXXXXXXXSTPR*LYLRNVLF 215
TR STP NVLF
Sbjct: 167 TRSSVDMSRRASRSTPLKANFLNVLF 90
Score = 172 bits (371), Expect = 1e-041
Identities = 73/145 (50%), Positives = 98/145 (67%)
Frame = -1 / -2
Query: 647 TDLGNNSFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNN 468
TD +S +RD+P GV TN P VL+ LV +GELCK+++NHLRLDL+LVE L+IV TN+
Sbjct: 522 TDSVWSSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTND 343
Query: 467 APNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDE 288
A NH NDHV ++G HW WLL + FRLA+ L++ H L Q+ EPS EELD+
Sbjct: 342 ASNHFRHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDK 163
Query: 287 VVGGHVKQRIEVDAAVAVLAERPLL 213
++G HV++ IE+D+ ER LL
Sbjct: 162 IIGRHVEKSIEIDSFEGEFLERSLL 88
Score = 122 bits (262), Expect(2) = 5e-027
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +3
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
EAR SE+P +HDHC +DW+H WC+QW+D QP DQA*DDW L CRVLH +QA AR A
Sbjct: 279 EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS*AR*A 458
Query: 584 RYWCHSLLAVYPSEMSCYPDL 646
WC+ LL V+PS++ L
Sbjct: 459 WRWCYPLLQVHPSQVKTIQSL 521
Score = 22.6 bits (43), Expect(2) = 5e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 52 DVEPEVAAAGVPKK 93
>gb|AY050966.1| Arabidopsis thaliana putative ribosomal protein S15 (At5g09510)
mRNA, complete cds
Length = 1160
Score = 313 bits (678), Expect = 4e-084
Identities = 128/152 (84%), Positives = 142/152 (93%)
Frame = +3 / +2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 107 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 286
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 287 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 466
Query: 558 YKPVKHGRPGIGATHSSRFIPLK*VVTQICSV 653
YKPVKHGRPG+GATHSSRFIPLK* ++C V
Sbjct: 467 YKPVKHGRPGVGATHSSRFIPLK*RPYRVCVV 562
Score = 203 bits (438), Expect = 6e-051
Identities = 96/146 (65%), Positives = 100/146 (68%)
Frame = -2 / -3
Query: 652 TLQIWVTTHFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TP 473
T Q H RG+N EE VAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP
Sbjct: 561 TTQTLYGLHLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTP 382
Query: 472 TMLPIISGTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSW 293
MLPIISGTMIM +WV TGSGFSP GAS FALRSFL+ A+GFL PL NLL R KS
Sbjct: 381 MMLPIISGTMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSL 202
Query: 292 TRXXXXXXXXXXXSTPR*LYLRNVLF 215
TR STP NVLF
Sbjct: 201 TRSSVDMSRRASRSTPLKANFLNVLF 124
Score = 172 bits (371), Expect = 1e-041
Identities = 73/145 (50%), Positives = 98/145 (67%)
Frame = -1 / -2
Query: 647 TDLGNNSFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNN 468
TD +S +RD+P GV TN P VL+ LV +GELCK+++NHLRLDL+LVE L+IV TN+
Sbjct: 556 TDSVWSSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTND 377
Query: 467 APNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDE 288
A NH NDHV ++G HW WLL + FRLA+ L++ H L Q+ EPS EELD+
Sbjct: 376 ASNHFRHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDK 197
Query: 287 VVGGHVKQRIEVDAAVAVLAERPLL 213
++G HV++ IE+D+ ER LL
Sbjct: 196 IIGRHVEKSIEIDSFEGEFLERSLL 122
Score = 122 bits (262), Expect = 1e-026
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +1
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
EAR SE+P +HDHC +DW+H WC+QW+D QP DQA*DDW L CRVLH +QA AR A
Sbjct: 313 EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS*AR*A 492
Query: 584 RYWCHSLLAVYPSEMSCYPDL 646
WC+ LL V+PS++ L
Sbjct: 493 WRWCYPLLQVHPSQVKTIQSL 555
>gb|AY096616.1| Arabidopsis thaliana putative ribosomal protein S15 (AT5g09510)
mRNA, complete cds
Length = 490
Score = 313 bits (678), Expect = 4e-084
Identities = 128/152 (84%), Positives = 142/152 (93%)
Frame = +3 / +1
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 28 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 207
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 208 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 387
Query: 558 YKPVKHGRPGIGATHSSRFIPLK*VVTQICSV 653
YKPVKHGRPG+GATHSSRFIPLK* ++C V
Sbjct: 388 YKPVKHGRPGVGATHSSRFIPLK*RPYRVCVV 483
Score = 203 bits (438), Expect = 6e-051
Identities = 96/146 (65%), Positives = 100/146 (68%)
Frame = -2 / -3
Query: 652 TLQIWVTTHFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TP 473
T Q H RG+N EE VAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP
Sbjct: 482 TTQTLYGLHLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTP 303
Query: 472 TMLPIISGTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSW 293
MLPIISGTMIM +WV TGSGFSP GAS FALRSFL+ A+GFL PL NLL R KS
Sbjct: 302 MMLPIISGTMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSL 123
Query: 292 TRXXXXXXXXXXXSTPR*LYLRNVLF 215
TR STP NVLF
Sbjct: 122 TRSSVDMSRRASRSTPLKANFLNVLF 45
Score = 172 bits (371), Expect = 1e-041
Identities = 73/145 (50%), Positives = 98/145 (67%)
Frame = -1 / -2
Query: 647 TDLGNNSFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNN 468
TD +S +RD+P GV TN P VL+ LV +GELCK+++NHLRLDL+LVE L+IV TN+
Sbjct: 477 TDSVWSSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTND 298
Query: 467 APNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDE 288
A NH NDHV ++G HW WLL + FRLA+ L++ H L Q+ EPS EELD+
Sbjct: 297 ASNHFRHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDK 118
Query: 287 VVGGHVKQRIEVDAAVAVLAERPLL 213
++G HV++ IE+D+ ER LL
Sbjct: 117 IIGRHVEKSIEIDSFEGEFLERSLL 43
Score = 122 bits (262), Expect(2) = 4e-027
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +3
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
EAR SE+P +HDHC +DW+H WC+QW+D QP DQA*DDW L CRVLH +QA AR A
Sbjct: 234 EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS*AR*A 413
Query: 584 RYWCHSLLAVYPSEMSCYPDL 646
WC+ LL V+PS++ L
Sbjct: 414 WRWCYPLLQVHPSQVKTIQSL 476
Score = 22.6 bits (43), Expect(2) = 4e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 7 DVEPEVAAAGVPKK 48
>gb|AY085630.1| Arabidopsis thaliana clone 164 mRNA, complete sequence
Length = 753
Score = 313 bits (678), Expect = 4e-084
Identities = 128/152 (84%), Positives = 142/152 (93%)
Frame = +3 / +3
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 147 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 326
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 327 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 506
Query: 558 YKPVKHGRPGIGATHSSRFIPLK*VVTQICSV 653
YKPVKHGRPG+GATHSSRFIPLK* ++C V
Sbjct: 507 YKPVKHGRPGVGATHSSRFIPLK*RPYRVCVV 602
Score = 203 bits (438), Expect = 6e-051
Identities = 96/146 (65%), Positives = 100/146 (68%)
Frame = -2 / -3
Query: 652 TLQIWVTTHFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TP 473
T Q H RG+N EE VAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP
Sbjct: 601 TTQTLYGLHLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTP 422
Query: 472 TMLPIISGTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSW 293
MLPIISGTMIM +WV TGSGFSP GAS FALRSFL+ A+GFL PL NLL R KS
Sbjct: 421 MMLPIISGTMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSL 242
Query: 292 TRXXXXXXXXXXXSTPR*LYLRNVLF 215
TR STP NVLF
Sbjct: 241 TRSSVDMSRRASRSTPLKANFLNVLF 164
Score = 172 bits (371), Expect = 1e-041
Identities = 73/145 (50%), Positives = 98/145 (67%)
Frame = -1 / -2
Query: 647 TDLGNNSFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNN 468
TD +S +RD+P GV TN P VL+ LV +GELCK+++NHLRLDL+LVE L+IV TN+
Sbjct: 596 TDSVWSSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTND 417
Query: 467 APNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDE 288
A NH NDHV ++G HW WLL + FRLA+ L++ H L Q+ EPS EELD+
Sbjct: 416 ASNHFRHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDK 237
Query: 287 VVGGHVKQRIEVDAAVAVLAERPLL 213
++G HV++ IE+D+ ER LL
Sbjct: 236 IIGRHVEKSIEIDSFEGEFLERSLL 162
Score = 122 bits (262), Expect(2) = 7e-027
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +2
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
EAR SE+P +HDHC +DW+H WC+QW+D QP DQA*DDW L CRVLH +QA AR A
Sbjct: 353 EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS*AR*A 532
Query: 584 RYWCHSLLAVYPSEMSCYPDL 646
WC+ LL V+PS++ L
Sbjct: 533 WRWCYPLLQVHPSQVKTIQSL 595
Score = 22.6 bits (43), Expect(2) = 7e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 126 DVEPEVAAAGVPKK 167
>ref|NM_120988.2| Arabidopsis thaliana structural constituent of ribosome AT5G09510
mRNA, complete cds
Length = 1163
Score = 313 bits (678), Expect = 4e-084
Identities = 128/152 (84%), Positives = 142/152 (93%)
Frame = +3 / +3
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 147 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 326
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 327 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 506
Query: 558 YKPVKHGRPGIGATHSSRFIPLK*VVTQICSV 653
YKPVKHGRPG+GATHSSRFIPLK* ++C V
Sbjct: 507 YKPVKHGRPGVGATHSSRFIPLK*RPYRVCVV 602
Score = 203 bits (438), Expect = 6e-051
Identities = 96/146 (65%), Positives = 100/146 (68%)
Frame = -2 / -2
Query: 652 TLQIWVTTHFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TP 473
T Q H RG+N EE VAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP
Sbjct: 601 TTQTLYGLHLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTP 422
Query: 472 TMLPIISGTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSW 293
MLPIISGTMIM +WV TGSGFSP GAS FALRSFL+ A+GFL PL NLL R KS
Sbjct: 421 MMLPIISGTMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSL 242
Query: 292 TRXXXXXXXXXXXSTPR*LYLRNVLF 215
TR STP NVLF
Sbjct: 241 TRSSVDMSRRASRSTPLKANFLNVLF 164
Score = 172 bits (371), Expect = 1e-041
Identities = 73/145 (50%), Positives = 98/145 (67%)
Frame = -1 / -1
Query: 647 TDLGNNSFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNN 468
TD +S +RD+P GV TN P VL+ LV +GELCK+++NHLRLDL+LVE L+IV TN+
Sbjct: 596 TDSVWSSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTND 417
Query: 467 APNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDE 288
A NH NDHV ++G HW WLL + FRLA+ L++ H L Q+ EPS EELD+
Sbjct: 416 ASNHFRHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDK 237
Query: 287 VVGGHVKQRIEVDAAVAVLAERPLL 213
++G HV++ IE+D+ ER LL
Sbjct: 236 IIGRHVEKSIEIDSFEGEFLERSLL 162
Score = 122 bits (262), Expect = 1e-026
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +2
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
EAR SE+P +HDHC +DW+H WC+QW+D QP DQA*DDW L CRVLH +QA AR A
Sbjct: 353 EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS*AR*A 532
Query: 584 RYWCHSLLAVYPSEMSCYPDL 646
WC+ LL V+PS++ L
Sbjct: 533 WRWCYPLLQVHPSQVKTIQSL 595
>gb|BE039272.1|BE039272 AC01D03 AC Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 726
Score = 312 bits (676), Expect = 8e-084
Identities = 127/150 (84%), Positives = 141/150 (94%)
Frame = +3 / +2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 77 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 256
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 257 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 436
Query: 558 YKPVKHGRPGIGATHSSRFIPLK*VVTQIC 647
YKPVKHGRPG+GATHSSRFIPLK* ++C
Sbjct: 437 YKPVKHGRPGVGATHSSRFIPLK*RPYRVC 526
Score = 202 bits (436), Expect = 1e-050
Identities = 94/138 (68%), Positives = 98/138 (71%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 507 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 328
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FALRSFL+ A+GFL PL NLL R KS TR
Sbjct: 327 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 148
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP NVLF
Sbjct: 147 RRASRSTPLKANFLNVLF 94
Score = 172 bits (371), Expect = 1e-041
Identities = 73/145 (50%), Positives = 98/145 (67%)
Frame = -1 / -3
Query: 647 TDLGNNSFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNN 468
TD +S +RD+P GV TN P VL+ LV +GELCK+++NHLRLDL+LVE L+IV TN+
Sbjct: 526 TDSVWSSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTND 347
Query: 467 APNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDE 288
A NH NDHV ++G HW WLL + FRLA+ L++ H L Q+ EPS EELD+
Sbjct: 346 ASNHFRHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDK 167
Query: 287 VVGGHVKQRIEVDAAVAVLAERPLL 213
++G HV++ IE+D+ ER LL
Sbjct: 166 IIGRHVEKSIEIDSFEGEFLERSLL 92
Score = 122 bits (262), Expect(2) = 7e-027
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +1
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
EAR SE+P +HDHC +DW+H WC+QW+D QP DQA*DDW L CRVLH +QA AR A
Sbjct: 283 EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS*AR*A 462
Query: 584 RYWCHSLLAVYPSEMSCYPDL 646
WC+ LL V+PS++ L
Sbjct: 463 WRWCYPLLQVHPSQVKTIQSL 525
Score = 22.6 bits (43), Expect(2) = 7e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 56 DVEPEVAAAGVPKK 97
>gb|AV826432.1|AV826432 AV826432 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-15-A10 5',
mRNA sequence
Length = 630
Score = 312 bits (676), Expect = 8e-084
Identities = 127/150 (84%), Positives = 141/150 (94%)
Frame = +3 / +3
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 108 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 287
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 288 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 467
Query: 558 YKPVKHGRPGIGATHSSRFIPLK*VVTQIC 647
YKPVKHGRPG+GATHSSRFIPLK* ++C
Sbjct: 468 YKPVKHGRPGVGATHSSRFIPLK*RPYRVC 557
Score = 202 bits (436), Expect = 1e-050
Identities = 94/138 (68%), Positives = 98/138 (71%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 538 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 359
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FALRSFL+ A+GFL PL NLL R KS TR
Sbjct: 358 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 179
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP NVLF
Sbjct: 178 RRASRSTPLKANFLNVLF 125
Score = 172 bits (371), Expect = 1e-041
Identities = 73/145 (50%), Positives = 98/145 (67%)
Frame = -1 / -2
Query: 647 TDLGNNSFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNN 468
TD +S +RD+P GV TN P VL+ LV +GELCK+++NHLRLDL+LVE L+IV TN+
Sbjct: 557 TDSVWSSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTND 378
Query: 467 APNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDE 288
A NH NDHV ++G HW WLL + FRLA+ L++ H L Q+ EPS EELD+
Sbjct: 377 ASNHFRHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDK 198
Query: 287 VVGGHVKQRIEVDAAVAVLAERPLL 213
++G HV++ IE+D+ ER LL
Sbjct: 197 IIGRHVEKSIEIDSFEGEFLERSLL 123
Score = 122 bits (262), Expect(2) = 6e-027
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +2
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
EAR SE+P +HDHC +DW+H WC+QW+D QP DQA*DDW L CRVLH +QA AR A
Sbjct: 314 EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS*AR*A 493
Query: 584 RYWCHSLLAVYPSEMSCYPDL 646
WC+ LL V+PS++ L
Sbjct: 494 WRWCYPLLQVHPSQVKTIQSL 556
Score = 22.6 bits (43), Expect(2) = 6e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 87 DVEPEVAAAGVPKK 128
>gb|AV553671.1|AV553671 AV553671 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ69c07R 5', mRNA sequence
Length = 544
Score = 312 bits (675), Expect = 1e-083
Identities = 127/152 (83%), Positives = 142/152 (93%)
Frame = +3 / +2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 89 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 268
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 269 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 448
Query: 558 YKPVKHGRPGIGATHSSRFIPLK*VVTQICSV 653
YKPVKHGRPG+GATHSS+FIPLK* ++C V
Sbjct: 449 YKPVKHGRPGVGATHSSKFIPLK*RPYRVCVV 544
Score = 203 bits (438), Expect = 6e-051
Identities = 96/146 (65%), Positives = 100/146 (68%)
Frame = -2 / -2
Query: 652 TLQIWVTTHFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TP 473
T Q H RG+N EE VAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP
Sbjct: 543 TTQTLYGLHLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTP 364
Query: 472 TMLPIISGTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSW 293
MLPIISGTMIM +WV TGSGFSP GAS FALRSFL+ A+GFL PL NLL R KS
Sbjct: 363 MMLPIISGTMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSL 184
Query: 292 TRXXXXXXXXXXXSTPR*LYLRNVLF 215
TR STP NVLF
Sbjct: 183 TRSSVDMSRRASRSTPLKANFLNVLF 106
Score = 168 bits (361), Expect = 2e-040
Identities = 72/145 (49%), Positives = 97/145 (66%)
Frame = -1 / -1
Query: 647 TDLGNNSFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNN 468
TD +S +RD+ GV TN P VL+ LV +GELCK+++NHLRLDL+LVE L+IV TN+
Sbjct: 538 TDSVWSSLERDELGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTND 359
Query: 467 APNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDE 288
A NH NDHV ++G HW WLL + FRLA+ L++ H L Q+ EPS EELD+
Sbjct: 358 ASNHFRHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDK 179
Query: 287 VVGGHVKQRIEVDAAVAVLAERPLL 213
++G HV++ IE+D+ ER LL
Sbjct: 178 IIGRHVEKSIEIDSFEGEFLERSLL 104
Score = 122 bits (262), Expect(2) = 5e-027
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +1
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
EAR SE+P +HDHC +DW+H WC+QW+D QP DQA*DDW L CRVLH +QA AR A
Sbjct: 295 EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS*AR*A 474
Query: 584 RYWCHSLLAVYPSEMSCYPDL 646
WC+ LL V+PS++ L
Sbjct: 475 WRWCYPLLQVHPSQVKTIQSL 537
Score = 22.6 bits (43), Expect(2) = 5e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 68 DVEPEVAAAGVPKK 109
>gb|AV784120.1|AV784120 AV784120 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-16-H14 3',
mRNA sequence
Length = 683
Score = 308 bits (668), Expect = 1e-082
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / -1
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 611 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 432
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 431 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 252
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 251 YKPVKHGRPGVGATHSSRFIPLK* 180
Score = 198 bits (426), Expect = 3e-049
Identities = 93/139 (66%), Positives = 98/139 (70%)
Frame = -2 / +1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 181 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 360
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 361 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 540
Query: 268 XXXXXSTPR*LYLRNVLFL 212
STP NVLFL
Sbjct: 541 RRASRSTPLKANFLNVLFL 597
Score = 165 bits (354), Expect = 2e-039
Identities = 68/133 (51%), Positives = 93/133 (69%)
Frame = -1 / +3
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 207 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 386
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAA 243
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++
Sbjct: 387 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSF 566
Query: 242 VAVLAERPLLGST 204
L +RPLLG++
Sbjct: 567 EGKLLKRPLLGNS 605
Score = 105 bits (223), Expect(2) = 1e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / -3
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 426 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 247
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 246 AGQAR*AWCWCYPLFQIH 193
Score = 22.6 bits (43), Expect(2) = 1e-021
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / -1
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 632 DVEPEVAAAGVPKK 591
>gb|AV823191.1|AV823191 AV823191 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-16-H14 5',
mRNA sequence
Length = 649
Score = 308 bits (668), Expect = 1e-082
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +3
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 120 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 299
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 300 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 480 YKPVKHGRPGVGATHSSRFIPLK* 551
Score = 198 bits (426), Expect = 3e-049
Identities = 93/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 550 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 371
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 370 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 191
Query: 268 XXXXXSTPR*LYLRNVLFL 212
STP NVLFL
Sbjct: 190 RRASRSTPLKANFLNVLFL 134
Score = 165 bits (354), Expect = 2e-039
Identities = 68/133 (51%), Positives = 93/133 (69%)
Frame = -1 / -3
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 524 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 345
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAA 243
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++
Sbjct: 344 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSF 165
Query: 242 VAVLAERPLLGST 204
L +RPLLG++
Sbjct: 164 EGKLLKRPLLGNS 126
Score = 105 bits (223), Expect(2) = 1e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / +2
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 305 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 484
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 485 AGQAR*AWCWCYPLFQIH 538
Score = 22.6 bits (43), Expect(2) = 1e-021
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 99 DVEPEVAAAGVPKK 140
>gb|CA781266.1|CA781266 014B04AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 665
Score = 308 bits (668), Expect = 1e-082
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 68 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 247
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 248 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 427
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 428 YKPVKHGRPGVGATHSSRFIPLK* 499
Score = 198 bits (426), Expect = 3e-049
Identities = 93/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 498 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 319
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 318 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 139
Query: 268 XXXXXSTPR*LYLRNVLFL 212
STP NVLFL
Sbjct: 138 RRASRSTPLKANFLNVLFL 82
Score = 165 bits (354), Expect = 2e-039
Identities = 68/133 (51%), Positives = 93/133 (69%)
Frame = -1 / -2
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 472 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 293
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAA 243
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++
Sbjct: 292 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSF 113
Query: 242 VAVLAERPLLGST 204
L +RPLLG++
Sbjct: 112 EGKLLKRPLLGNS 74
Score = 105 bits (223), Expect(2) = 1e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / +1
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 253 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 432
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 433 AGQAR*AWCWCYPLFQIH 486
Score = 22.6 bits (43), Expect(2) = 1e-021
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 47 DVEPEVAAAGVPKK 88
>gb|AV544758.1|AV544758 AV544758 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ58c02F 3', mRNA sequence
Length = 651
Score = 308 bits (668), Expect = 1e-082
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / -2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 608 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 429
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 428 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 249
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 248 YKPVKHGRPGVGATHSSRFIPLK* 177
Score = 198 bits (426), Expect = 3e-049
Identities = 93/139 (66%), Positives = 98/139 (70%)
Frame = -2 / +1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 178 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 357
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 358 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 537
Query: 268 XXXXXSTPR*LYLRNVLFL 212
STP NVLFL
Sbjct: 538 RRASRSTPLKANFLNVLFL 594
Score = 165 bits (354), Expect = 2e-039
Identities = 68/133 (51%), Positives = 93/133 (69%)
Frame = -1 / +3
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 204 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 383
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAA 243
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++
Sbjct: 384 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSF 563
Query: 242 VAVLAERPLLGST 204
L +RPLLG++
Sbjct: 564 EGKLLKRPLLGNS 602
Score = 105 bits (223), Expect(2) = 1e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / -1
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 423 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 244
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 243 AGQAR*AWCWCYPLFQIH 190
Score = 22.6 bits (43), Expect(2) = 1e-021
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / -2
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 629 DVEPEVAAAGVPKK 588
>gb|AV553255.1|AV553255 AV553255 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ58c02R 5', mRNA sequence
Length = 575
Score = 308 bits (668), Expect = 1e-082
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +1
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 88 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 267
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 268 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 447
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 448 YKPVKHGRPGVGATHSSRFIPLK* 519
Score = 198 bits (426), Expect = 3e-049
Identities = 93/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 518 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 339
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 338 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 159
Query: 268 XXXXXSTPR*LYLRNVLFL 212
STP NVLFL
Sbjct: 158 RRASRSTPLKANFLNVLFL 102
Score = 165 bits (354), Expect = 2e-039
Identities = 68/133 (51%), Positives = 93/133 (69%)
Frame = -1 / -3
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 492 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 313
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAA 243
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++
Sbjct: 312 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSF 133
Query: 242 VAVLAERPLLGST 204
L +RPLLG++
Sbjct: 132 EGKLLKRPLLGNS 94
Score = 105 bits (223), Expect(2) = 1e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / +3
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 273 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 452
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 453 AGQAR*AWCWCYPLFQIH 506
Score = 22.6 bits (43), Expect(2) = 1e-021
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 67 DVEPEVAAAGVPKK 108
>gb|AY048221.1| Arabidopsis thaliana At1g04270/F19P19_29 mRNA, complete cds
Length = 729
Score = 308 bits (668), Expect = 1e-082
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 119 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 298
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 299 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 478
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 479 YKPVKHGRPGVGATHSSRFIPLK* 550
Score = 198 bits (426), Expect = 3e-049
Identities = 93/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 549 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 370
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 369 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 190
Query: 268 XXXXXSTPR*LYLRNVLFL 212
STP NVLFL
Sbjct: 189 RRASRSTPLKANFLNVLFL 133
Score = 165 bits (354), Expect = 2e-039
Identities = 68/133 (51%), Positives = 93/133 (69%)
Frame = -1 / -3
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 523 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 344
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAA 243
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++
Sbjct: 343 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSF 164
Query: 242 VAVLAERPLLGST 204
L +RPLLG++
Sbjct: 163 EGKLLKRPLLGNS 125
Score = 105 bits (223), Expect(2) = 1e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / +1
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 304 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 483
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 484 AGQAR*AWCWCYPLFQIH 537
Score = 22.6 bits (43), Expect(2) = 1e-021
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 98 DVEPEVAAAGVPKK 139
>gb|AY091703.1| Arabidopsis thaliana At1g04270/F19P19_29 mRNA, complete cds
Length = 459
Score = 308 bits (668), Expect = 1e-082
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +1
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 28 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 207
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 208 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 387
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 388 YKPVKHGRPGVGATHSSRFIPLK* 459
Score = 198 bits (426), Expect = 3e-049
Identities = 93/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 458 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 279
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 278 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 99
Query: 268 XXXXXSTPR*LYLRNVLFL 212
STP NVLFL
Sbjct: 98 RRASRSTPLKANFLNVLFL 42
Score = 165 bits (354), Expect = 2e-039
Identities = 68/133 (51%), Positives = 93/133 (69%)
Frame = -1 / -1
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 432 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 253
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAA 243
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++
Sbjct: 252 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSF 73
Query: 242 VAVLAERPLLGST 204
L +RPLLG++
Sbjct: 72 EGKLLKRPLLGNS 34
Score = 105 bits (223), Expect(2) = 8e-022
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / +3
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 213 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 392
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 393 AGQAR*AWCWCYPLFQIH 446
Score = 22.6 bits (43), Expect(2) = 8e-022
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 7 DVEPEVAAAGVPKK 48
>emb|BX817406.1|CNS0ACK0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL20ZD06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 695
Score = 308 bits (668), Expect = 1e-082
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 83 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 262
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 263 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 442
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 443 YKPVKHGRPGVGATHSSRFIPLK* 514
Score = 198 bits (426), Expect = 3e-049
Identities = 93/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 513 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 334
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 333 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 154
Query: 268 XXXXXSTPR*LYLRNVLFL 212
STP NVLFL
Sbjct: 153 RRASRSTPLKANFLNVLFL 97
Score = 165 bits (354), Expect = 2e-039
Identities = 68/133 (51%), Positives = 93/133 (69%)
Frame = -1 / -2
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 487 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 308
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAA 243
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++
Sbjct: 307 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSF 128
Query: 242 VAVLAERPLLGST 204
L +RPLLG++
Sbjct: 127 EGKLLKRPLLGNS 89
Score = 105 bits (223), Expect(2) = 1e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / +1
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 268 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 447
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 448 AGQAR*AWCWCYPLFQIH 501
Score = 22.6 bits (43), Expect(2) = 1e-021
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 62 DVEPEVAAAGVPKK 103
>emb|Z23161.1|ATRBPS15A A.thaliana ribosomal protein S15 mRNA, complete CDS
Length = 668
Score = 308 bits (668), Expect = 1e-082
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +3
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 57 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 236
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 237 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 416
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 417 YKPVKHGRPGVGATHSSRFIPLK* 488
Score = 198 bits (426), Expect = 3e-049
Identities = 93/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 487 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 308
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 307 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 128
Query: 268 XXXXXSTPR*LYLRNVLFL 212
STP NVLFL
Sbjct: 127 RRASRSTPLKANFLNVLFL 71
Score = 165 bits (354), Expect = 2e-039
Identities = 68/133 (51%), Positives = 93/133 (69%)
Frame = -1 / -1
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 461 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 282
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAA 243
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++
Sbjct: 281 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSF 102
Query: 242 VAVLAERPLLGST 204
L +RPLLG++
Sbjct: 101 EGKLLKRPLLGNS 63
Score = 105 bits (223), Expect(2) = 1e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / +2
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 242 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 421
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 422 AGQAR*AWCWCYPLFQIH 475
Score = 22.6 bits (43), Expect(2) = 1e-021
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 36 DVEPEVAAAGVPKK 77
>ref|NM_100308.2| Arabidopsis thaliana RPS15 (RIBOSOMAL PROTEIN S15); structural
constituent of ribosome AT1G04270 (RPS15) transcript
variant AT1G04270.1 mRNA, complete cds
Length = 798
Score = 308 bits (668), Expect = 1e-082
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 119 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 298
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 299 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 478
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 479 YKPVKHGRPGVGATHSSRFIPLK* 550
Score = 198 bits (426), Expect = 3e-049
Identities = 93/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 549 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 370
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 369 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 190
Query: 268 XXXXXSTPR*LYLRNVLFL 212
STP NVLFL
Sbjct: 189 RRASRSTPLKANFLNVLFL 133
Score = 165 bits (354), Expect = 2e-039
Identities = 68/133 (51%), Positives = 93/133 (69%)
Frame = -1 / -3
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 523 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 344
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAA 243
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++
Sbjct: 343 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSF 164
Query: 242 VAVLAERPLLGST 204
L +RPLLG++
Sbjct: 163 EGKLLKRPLLGNS 125
Score = 105 bits (223), Expect(2) = 2e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / +1
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 304 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 483
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 484 AGQAR*AWCWCYPLFQIH 537
Score = 22.6 bits (43), Expect(2) = 2e-021
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 98 DVEPEVAAAGVPKK 139
>emb|X91962.1|AT40SRS15 A.thaliana mRNA for 40S ribosomal protein S15
Length = 694
Score = 307 bits (665), Expect = 3e-082
Identities = 125/144 (86%), Positives = 138/144 (95%)
Frame = +3 / +2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 89 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 268
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMII+PEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 269 AKREAPQGEKPEPVRTHLRNMIILPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 448
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 449 YKPVKHGRPGVGATHSSRFIPLK* 520
Score = 197 bits (425), Expect = 4e-049
Identities = 93/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL*TP MLPIISG
Sbjct: 519 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPL*TPMMLPIISG 340
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
MIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 339 RMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 160
Query: 268 XXXXXSTPR*LYLRNVLFL 212
STP NVLFL
Sbjct: 159 RRASRSTPLKANFLNVLFL 103
Score = 166 bits (356), Expect = 1e-039
Identities = 68/133 (51%), Positives = 94/133 (70%)
Frame = -1 / -1
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V+TN+A NH ++DHV ++G
Sbjct: 493 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVNTNDAANHFREDDHVPQVG 314
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAA 243
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++
Sbjct: 313 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSSNTRREELDKIISRHIEKSIEINSF 134
Query: 242 VAVLAERPLLGST 204
L +RPLLG++
Sbjct: 133 EGKLLKRPLLGNS 95
Score = 111 bits (237), Expect(2) = 2e-023
Identities = 45/78 (57%), Positives = 56/78 (71%)
Frame = +2 / +1
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H WCLQ +D QPG*DQA*DDW L VL+ +Q
Sbjct: 274 KGGTTR*EARTSENPLEEHDHPP*NDWQHHWCLQRKDFQPG*DQA*DDWSLPG*VLYLIQ 453
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 454 AGQAR*AWCWCYPLFQIH 507
Score = 22.6 bits (43), Expect(2) = 2e-023
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 68 DVEPEVAAAGVPKK 109
>gb|BE037545.1|BE037545 AA01A06 AA Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 758
Score = 307 bits (664), Expect = 4e-082
Identities = 125/144 (86%), Positives = 137/144 (95%)
Frame = +3 / +3
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 123 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 302
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 303 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 482
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPVKHGRPG+GATHS RFIPLK*
Sbjct: 483 YKPVKHGRPGVGATHSXRFIPLK* 554
Score = 195 bits (420), Expect = 2e-048
Identities = 92/139 (66%), Positives = 97/139 (69%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N E VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 553 HLRGMNLXEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 374
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 373 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 194
Query: 268 XXXXXSTPR*LYLRNVLFL 212
STP NVLFL
Sbjct: 193 RRASRSTPLKANFLNVLFL 137
Score = 165 bits (354), Expect = 2e-039
Identities = 68/133 (51%), Positives = 93/133 (69%)
Frame = -1 / -1
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 527 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 348
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAA 243
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++
Sbjct: 347 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSF 168
Query: 242 VAVLAERPLLGST 204
L +RPLLG++
Sbjct: 167 EGKLLKRPLLGNS 129
Score = 104 bits (222), Expect(2) = 2e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / +2
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 308 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 487
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 488 AGQAR*AWCWCYPLXQIH 541
Score = 22.6 bits (43), Expect(2) = 2e-021
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 102 DVEPEVAAAGVPKK 143
>gb|BE038613.1|BE038613 AB01H05 AB Arabidopsis thaliana cDNA 5' similar to ribosomal
protein s15, mRNA sequence
Length = 709
Score = 307 bits (664), Expect = 4e-082
Identities = 126/144 (87%), Positives = 137/144 (95%)
Frame = +3 / +2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K +++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 83 AAGVPKKRTFKKLAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 262
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 263 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 442
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 443 YKPVKHGRPGVGATHSSRFIPLK* 514
Score = 198 bits (426), Expect = 3e-049
Identities = 93/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 513 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 334
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 333 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 154
Query: 268 XXXXXSTPR*LYLRNVLFL 212
STP NVLFL
Sbjct: 153 RRASRSTPLKASFLNVLFL 97
Score = 165 bits (354), Expect = 2e-039
Identities = 68/133 (51%), Positives = 93/133 (69%)
Frame = -1 / -1
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 487 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 308
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAA 243
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++
Sbjct: 307 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSF 128
Query: 242 VAVLAERPLLGST 204
L +RPLLG++
Sbjct: 127 EGKLLKRPLLGNS 89
Score = 105 bits (223), Expect(2) = 1e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / +1
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 268 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 447
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 448 AGQAR*AWCWCYPLFQIH 501
Score = 22.6 bits (43), Expect(2) = 1e-021
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 62 DVEPEVAAAGVPKK 103
>gb|BE038861.1|BE038861 AB05B09 AB Arabidopsis thaliana cDNA 5' similar to ribosomal
protein s15, mRNA sequence
Length = 725
Score = 303 bits (657), Expect = 4e-081
Identities = 123/150 (82%), Positives = 138/150 (92%)
Frame = +3 / +1
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 97 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 276
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKP+P +THLRNMIIVPEMIGSI+GVYNGKT NQVEIKPEMIGHYLAEFSIS
Sbjct: 277 AKREAPAGEKPDPARTHLRNMIIVPEMIGSIIGVYNGKTLNQVEIKPEMIGHYLAEFSIS 456
Query: 558 YKPVKHGRPGIGATHSSRFIPLK*VVTQIC 647
YKPVKHG PG+GATHSSRFIPLK* ++C
Sbjct: 457 YKPVKHGTPGVGATHSSRFIPLK*RPYRVC 546
Score = 197 bits (425), Expect = 4e-049
Identities = 93/149 (62%), Positives = 100/149 (67%)
Frame = -2 / -1
Query: 661 TLGTLQIWVTTHFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL 482
T + Q H RG+N EE VAP PG+PCLTGL EMENSAR* PIISGLISTWL+V PL
Sbjct: 560 TKSSTQTLYGLHLRGMNLEEWVAPTPGVPCLTGLYEMENSAR*CPIISGLISTWLRVFPL 381
Query: 481 *TPTMLPIISGTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAG 302
TP MLPIISGTMIM +WV GSGFSP GAS FALRSFL+ A+GFL PL NLL R
Sbjct: 380 YTPMMLPIISGTMIMFLKWVLAGSGFSPAGASLFALRSFLIRAIGFLVNPLENLLRIREE 201
Query: 301 KSWTRXXXXXXXXXXXSTPR*LYLRNVLF 215
KS TR STP NVLF
Sbjct: 200 KSLTRSSVDMSRRASRSTPLKANFLNVLF 114
Score = 166 bits (356), Expect = 1e-039
Identities = 71/145 (48%), Positives = 97/145 (66%)
Frame = -1 / -3
Query: 647 TDLGNNSFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNN 468
TD +S +RD+P GV TN VL+ LV +GELCK+++NHLRLDL+LVE L+IV TN+
Sbjct: 546 TDSVWSSLERDEPGGVGSTNARRTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTND 367
Query: 467 APNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDE 288
A NH NDHV ++G W+WLL + FRLA+ L++ H L Q+ EPS EELD+
Sbjct: 366 ASNHFRHNDHVPQVGSRWIWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDK 187
Query: 287 VVGGHVKQRIEVDAAVAVLAERPLL 213
++G HV++ IE+D+ ER LL
Sbjct: 186 IIGRHVEKSIEIDSFEGEFLERSLL 112
Score = 123 bits (263), Expect(2) = 5e-027
Identities = 46/81 (56%), Positives = 58/81 (71%)
Frame = +2 / +3
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
EAR+SE+P +HDHC +DW+H WC+QW+D QP DQA*DDW L CRVLH +QA AR A
Sbjct: 303 EARSSENPLEEHDHCA*NDWKHHWCVQWKDSQPSGDQA*DDWTLPCRVLHLVQAS*ARYA 482
Query: 584 RYWCHSLLAVYPSEMSCYPDL 646
WC+ LL V+PS++ L
Sbjct: 483 WRWCYPLLQVHPSQVKTIQSL 545
Score = 22.6 bits (43), Expect(2) = 5e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 76 DVEPEVAAAGVPKK 117
>ref|NM_120987.2| Arabidopsis thaliana structural constituent of ribosome AT5G09500
mRNA, complete cds
Length = 652
Score = 302 bits (654), Expect = 9e-081
Identities = 125/151 (82%), Positives = 139/151 (92%)
Frame = +3 / +3
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG KKRTF+K+S+RGVDLDALLDMSTDDLV+LFP+R RRRF RGL RKPMALIKKLRK
Sbjct: 90 AAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRK 269
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK +AP GEKP V+THLRNMIIVPEMIGS++GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 270 AKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 449
Query: 558 YKPVKHGRPGIGATHSSRFIPLK*VVTQICS 650
YKPVKHGRPG+GAT+SSRFIPLK*++ + S
Sbjct: 450 YKPVKHGRPGVGATNSSRFIPLK*IIKLLWS 542
Score = 199 bits (428), Expect = 1e-049
Identities = 95/158 (60%), Positives = 105/158 (66%)
Frame = -2 / -1
Query: 688 KAERAMPLDTLGTLQIWVTTHFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLI 509
K +R + ++ L + H RGIN EE VAP PGLPCLTGL E+ENSA+* PIISGLI
Sbjct: 580 KKKRKTRI*SITKLHKSLIIHLRGINLEELVAPTPGLPCLTGLYEIENSAK*CPIISGLI 401
Query: 508 STWLKVLPL*TPTMLPIISGTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPL 329
STWLKV PL*TP LPIISGTMIM RWV T +GFSP GAS FA RSFL+ A+GFL PL
Sbjct: 400 STWLKVFPL*TPMTLPIISGTMIMFLRWVLTAAGFSPAGASIFAFRSFLIKAIGFLVNPL 221
Query: 328 WNLLLARAGKSWTRXXXXXXXXXXXSTPR*LYLRNVLF 215
NLL R GKS TR STP NVLF
Sbjct: 220 ENLLRIREGKSLTRSSVDMSRRASRSTPLKENFLNVLF 107
Score = 138 bits (295), Expect = 3e-031
Identities = 59/138 (42%), Positives = 90/138 (65%)
Frame = -1 / -3
Query: 629 SFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLG 450
S +RDK G+ TNT P +L+RL+ + +L ++++NHL DL+LV+ L+IV+T++A NH
Sbjct: 521 SLERDKSGGIGSTNTRPTMLNRLI*D*KLSQVMSNHLWFDLDLVKSLSIVNTDDASNHFR 342
Query: 449 DNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHV 270
NDHV +G H WLL+ FR Q LD+ H LP Q+ EPS E+LD+++ HV
Sbjct: 341 HNDHVP*VGSHCCWLLSSWCFNFRFPQFLDQSHRLPRQSSREPSTDTGREKLDKIISRHV 162
Query: 269 KQRIEVDAAVAVLAERPL 216
++ I++D++ L ER L
Sbjct: 161 EKSIKIDSSEGKLFERSL 108
>gb|AU235816.1|AU235816 AU235816 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-46-M02 5',
mRNA sequence
Length = 597
Score = 302 bits (653), Expect = 1e-080
Identities = 124/146 (84%), Positives = 137/146 (93%)
Frame = +3 / +1
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG KKRTF+K+S+RGVDLDALLDMSTDDLV+LFP+R RRRF RGL RKPMALIKKLRK
Sbjct: 91 AAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRK 270
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK +AP GEKP V+THLRNMIIVPEMIGS++GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 271 AKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 450
Query: 558 YKPVKHGRPGIGATHSSRFIPLK*VV 635
YKPVKHGRPG+GAT+SSRFIPLK*++
Sbjct: 451 YKPVKHGRPGVGATNSSRFIPLK*II 528
Score = 198 bits (427), Expect = 2e-049
Identities = 92/138 (66%), Positives = 97/138 (70%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RGIN EE VAP PGLPCLTGL E+ENSA+* PIISGLISTWLKV PL*TP LPIISG
Sbjct: 521 HLRGINLEELVAPTPGLPCLTGLYEIENSAK*CPIISGLISTWLKVFPL*TPMTLPIISG 342
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM RWV T +GFSP GAS FA RSFL+ A+GFL PL NLL R GKS TR
Sbjct: 341 TMIMFLRWVLTAAGFSPAGASIFAFRSFLIKAIGFLVNPLENLLRIREGKSLTRSSVDMS 162
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP NVLF
Sbjct: 161 RRASRSTPLKENFLNVLF 108
Score = 138 bits (295), Expect = 3e-031
Identities = 59/138 (42%), Positives = 90/138 (65%)
Frame = -1 / -1
Query: 629 SFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLG 450
S +RDK G+ TNT P +L+RL+ + +L ++++NHL DL+LV+ L+IV+T++A NH
Sbjct: 522 SLERDKSGGIGSTNTRPTMLNRLI*D*KLSQVMSNHLWFDLDLVKSLSIVNTDDASNHFR 343
Query: 449 DNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHV 270
NDHV +G H WLL+ FR Q LD+ H LP Q+ EPS E+LD+++ HV
Sbjct: 342 HNDHVP*VGSHCCWLLSSWCFNFRFPQFLDQSHRLPRQSSREPSTDTGREKLDKIISRHV 163
Query: 269 KQRIEVDAAVAVLAERPL 216
++ I++D++ L ER L
Sbjct: 162 EKSIKIDSSEGKLFERSL 109
>gb|AV538711.1|AV538711 AV538711 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ120a09F 3', mRNA sequence
Length = 597
Score = 299 bits (647), Expect = 8e-080
Identities = 122/139 (87%), Positives = 134/139 (96%)
Frame = +3 / -1
Query: 213 KKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDA 392
KKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRKAK++A
Sbjct: 597 KKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREA 418
Query: 393 PVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVK 572
P GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVK
Sbjct: 417 PQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVK 238
Query: 573 HGRPGIGATHSSRFIPLK* 629
HGRPG+GATHSSRFIPLK*
Sbjct: 237 HGRPGVGATHSSRFIPLK* 181
Score = 196 bits (422), Expect = 9e-049
Identities = 92/138 (66%), Positives = 97/138 (70%)
Frame = -2 / +2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 182 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 361
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 362 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 541
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP NVLF
Sbjct: 542 RRASRSTPLKANFLNVLF 595
Score = 161 bits (346), Expect = 3e-038
Identities = 67/130 (51%), Positives = 90/130 (69%)
Frame = -1 / +1
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 208 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 387
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAA 243
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++
Sbjct: 388 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSF 567
Query: 242 VAVLAERPLL 213
L +RPLL
Sbjct: 568 EGKLLKRPLL 597
Score = 105 bits (223), Expect = 3e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / -3
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 427 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 248
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 247 AGQAR*AWCWCYPLFQIH 194
>gb|BT010135.1| Arabidopsis thaliana At5g09500 gene, complete cds
Length = 453
Score = 299 bits (647), Expect = 8e-080
Identities = 124/144 (86%), Positives = 135/144 (93%)
Frame = +3 / +1
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG KKRTF+K+S+RGVDLDALLDMSTDDLV+LFP+R RRRF RGL RKPMALIKKLRK
Sbjct: 22 AAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRK 201
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK +AP GEKP V+THLRNMIIVPEMIGS++GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 202 AKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 381
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPVKHGRPG+GAT+SSRFIPLK*
Sbjct: 382 YKPVKHGRPGVGATNSSRFIPLK* 453
Score = 198 bits (427), Expect = 2e-049
Identities = 92/138 (66%), Positives = 97/138 (70%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RGIN EE VAP PGLPCLTGL E+ENSA+* PIISGLISTWLKV PL*TP LPIISG
Sbjct: 452 HLRGINLEELVAPTPGLPCLTGLYEIENSAK*CPIISGLISTWLKVFPL*TPMTLPIISG 273
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM RWV T +GFSP GAS FA RSFL+ A+GFL PL NLL R GKS TR
Sbjct: 272 TMIMFLRWVLTAAGFSPAGASIFAFRSFLIKAIGFLVNPLENLLRIREGKSLTRSSVDMS 93
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP NVLF
Sbjct: 92 RRASRSTPLKENFLNVLF 39
Score = 138 bits (295), Expect = 3e-031
Identities = 59/138 (42%), Positives = 90/138 (65%)
Frame = -1 / -1
Query: 629 SFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLG 450
S +RDK G+ TNT P +L+RL+ + +L ++++NHL DL+LV+ L+IV+T++A NH
Sbjct: 453 SLERDKSGGIGSTNTRPTMLNRLI*D*KLSQVMSNHLWFDLDLVKSLSIVNTDDASNHFR 274
Query: 449 DNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHV 270
NDHV +G H WLL+ FR Q LD+ H LP Q+ EPS E+LD+++ HV
Sbjct: 273 HNDHVP*VGSHCCWLLSSWCFNFRFPQFLDQSHRLPRQSSREPSTDTGREKLDKIISRHV 94
Query: 269 KQRIEVDAAVAVLAERPL 216
++ I++D++ L ER L
Sbjct: 93 EKSIKIDSSEGKLFERSL 40
>gb|AV538084.1|AV538084 AV538084 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ11b11F 3', mRNA sequence
Length = 620
Score = 294 bits (637), Expect = 2e-078
Identities = 119/138 (86%), Positives = 132/138 (95%)
Frame = +3 / -2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 613 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 434
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 433 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 254
Query: 558 YKPVKHGRPGIGATHSSR 611
YKPVKHGRPG+GATHSS+
Sbjct: 253 YKPVKHGRPGVGATHSSQ 200
Score = 187 bits (402), Expect = 5e-046
Identities = 89/132 (67%), Positives = 93/132 (70%)
Frame = -2 / +3
Query: 607 EE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISGTMIMLRR 428
EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISGTMIM +
Sbjct: 204 EEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISGTMIMFLK 383
Query: 427 WVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXXXXXXXST 248
WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR ST
Sbjct: 384 WVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDISRRASRST 563
Query: 247 PR*LYLRNVLFL 212
P NVLFL
Sbjct: 564 PLKANFLNVLFL 599
Score = 167 bits (359), Expect = 4e-040
Identities = 70/139 (50%), Positives = 95/139 (68%)
Frame = -1 / +2
Query: 620 RDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDND 441
R R V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+D
Sbjct: 191 RSSLRRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDD 370
Query: 440 HVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQR 261
HV ++G HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++
Sbjct: 371 HVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKS 550
Query: 260 IEVDAAVAVLAERPLLGST 204
IE+++ L +RPLLG++
Sbjct: 551 IEINSFEGKLLKRPLLGNS 607
Score = 104 bits (221), Expect = 5e-021
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +3 / -3
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
N VEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 189 NLVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 58
Score = 103 bits (220), Expect = 7e-021
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +2 / -1
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 428 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 249
Query: 563 AGQAREARYWCHSLLA 610
AGQAR A WC+ L +
Sbjct: 248 AGQAR*AWCWCYPLFS 201
>ref|NM_123730.1| Arabidopsis thaliana structural constituent of ribosome AT5G43640
mRNA, complete cds
Length = 450
Score = 291 bits (629), Expect = 3e-077
Identities = 122/145 (84%), Positives = 133/145 (91%)
Frame = +3 / +1
Query: 195 VAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLR 374
VAAG KKRTF+K+S+RGVDLDALLDMS +DLV+ F +R RRRF RGL RKPMALIKKLR
Sbjct: 16 VAAGIVKKRTFKKFSFRGVDLDALLDMSIEDLVKHFSSRIRRRFSRGLTRKPMALIKKLR 195
Query: 375 KAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSI 554
KAK +AP GEKP V+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSI
Sbjct: 196 KAKMEAPAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSI 375
Query: 555 SYKPVKHGRPGIGATHSSRFIPLK* 629
SYKPVKHGRPG+GAT+SSRFIPLK*
Sbjct: 376 SYKPVKHGRPGVGATNSSRFIPLK* 450
Score = 180 bits (388), Expect = 4e-044
Identities = 86/138 (62%), Positives = 93/138 (67%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RGIN EE VAP PGLPC TGL E+ENSA+* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 449 HLRGINLEELVAPTPGLPCFTGLYEIENSAK*CPIISGLISTWLKVFPLYTPMMLPIISG 270
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
TMIM + V T +GFSP GAS FALR+FL+ A+GFL PL NLL R K TR
Sbjct: 269 TMIMFLKCVLTDAGFSPAGASIFALRNFLIKAIGFLVNPLENLLRIRELKCLTRSSMDMS 90
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP VLF
Sbjct: 89 RSASRSTPLKENFLKVLF 36
Score = 138 bits (295), Expect = 3e-031
Identities = 61/138 (44%), Positives = 87/138 (63%)
Frame = -1 / -1
Query: 629 SFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLG 450
S +RDKP G+ TNT P VL R V + EL ++++NHLRLDL+LV+ L++V TN+A NH
Sbjct: 450 SLERDKPGGIGSTNTRPTVLYRFV*D*ELSQVMSNHLRLDLDLVKSLSVVHTNDASNHFR 271
Query: 449 DNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHV 270
NDHV ++ H WLL + FR AQ L++ H Q+ +PS E D++ GHV
Sbjct: 270 HNDHVPQVCSH*CWLLTSWCLHFRFAQFLNQSHRFSGQSSRKPSANTGTEMFDKIFDGHV 91
Query: 269 KQRIEVDAAVAVLAERPL 216
++RIE+D++ L E L
Sbjct: 90 EKRIEIDSSERKLFEGSL 37
>ref|NM_001035879.1| Arabidopsis thaliana RPS15 (RIBOSOMAL PROTEIN S15); structural
constituent of ribosome AT1G04270 (RPS15) transcript
variant AT1G04270.2 mRNA, complete cds
Length = 795
Score = 193 bits (417), Expect(2) = 3e-077
Identities = 78/88 (88%), Positives = 84/88 (95%)
Frame = +3 / +2
Query: 366 KLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAE 545
K + K++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAE
Sbjct: 284 KKLRKKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAE 463
Query: 546 FSISYKPVKHGRPGIGATHSSRFIPLK* 629
FSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 464 FSISYKPVKHGRPGVGATHSSRFIPLK* 547
Score = 154 bits (330), Expect(2) = 5e-049
Identities = 67/85 (78%), Positives = 70/85 (82%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 546 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 367
Query: 448 TMIMLRRWVFTGSGFSPTGASFFAL 374
TMIM +WV TGSGFSP GAS F L
Sbjct: 366 TMIMFLKWVLTGSGFSPCGASLFFL 292
Score = 117 bits (251), Expect(2) = 3e-077
Identities = 48/63 (76%), Positives = 57/63 (90%)
Frame = +3 / +2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 119 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 298
Query: 378 AKK 386
++
Sbjct: 299 KRE 307
Score = 105 bits (223), Expect(3) = 2e-022
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / +1
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 301 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 480
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 481 AGQAR*AWCWCYPLFQIH 534
Score = 104 bits (221), Expect(2) = 3e-029
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -1 / -3
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 520 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 341
Query: 422 LHWLWLL 402
HW WLL
Sbjct: 340 SHWFWLL 320
Score = 63.4 bits (132), Expect(2) = 5e-049
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = -1 / -3
Query: 371 QLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAAVAVLAERPLLGST 204
QLL++ H LP QT EPS R EELD+++ H+++ IE+++ L +RPLLG++
Sbjct: 292 QLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNS 125
Score = 46.9 bits (96), Expect(2) = 3e-029
Identities = 26/53 (49%), Positives = 28/53 (52%)
Frame = -2 / -1
Query: 370 SFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXXXXXXXSTPR*LYLRNVLFL 212
SFL+ A+GFL KPL NLL R KS TR STP NVLFL
Sbjct: 291 SFLIRAIGFLVKPLENLLRIREEKSLTRSSVDISRRASRSTPLKANFLNVLFL 133
Score = 22.6 bits (43), Expect(3) = 2e-022
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 98 DVEPEVAAAGVPKK 139
Score = 21.7 bits (41), Expect(3) = 2e-022
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1 / +3
Query: 319 EGSRGV*RGSPWRSSRSCARRKR 387
EGS V*+GS W RS ++ R
Sbjct: 240 EGSLEV*QGSQWL*LRS*GKKGR 308
>gb|AY086958.1| Arabidopsis thaliana clone 29963 mRNA, complete sequence
Length = 682
Score = 290 bits (627), Expect = 5e-077
Identities = 118/144 (81%), Positives = 132/144 (91%)
Frame = +3 / +3
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AA KKRTF+K+S++GVDLDALLDM TDDLV+LFP+R RRR RGL RKPMALIKKLRK
Sbjct: 90 AAALAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRMSRGLTRKPMALIKKLRK 269
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK DAP GEKPE V+THLRNM+I+PEMIGSI+GVYNGKTFNQ+EIKPEMIGHYLAEFSI+
Sbjct: 270 AKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIGHYLAEFSIT 449
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPV+HG+PG GATHSSRFIPLK*
Sbjct: 450 YKPVRHGKPGHGATHSSRFIPLK* 521
Score = 189 bits (407), Expect = 1e-046
Identities = 92/159 (57%), Positives = 99/159 (62%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RGIN EE VAP PGLPCLTGL* +ENSAR* PIISGLIS WLKV PL TP MLPIISG
Sbjct: 520 HLRGINLEECVAP*PGLPCLTGL*VIENSAR*CPIISGLISIWLKVFPLYTPIMLPIISG 341
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
+ M RWV T SGFSP GAS FALR+FLM A+GFL PL LLL R GKS TR
Sbjct: 340 IITMFLRWVLTTSGFSPAGASSFALRNFLMRAIGFLVNPLLILLLIREGKSSTRSSVGMS 161
Query: 268 XXXXXSTPR*LYLRNVLFLXXXXXXXXXXXXXAMFEVKS 152
STP NVLF + ++S
Sbjct: 160 RRASRSTPLKENFLNVLFFARAAAETSGSTSAIVLGLRS 44
Score = 146 bits (313), Expect = 1e-033
Identities = 69/139 (49%), Positives = 86/139 (61%)
Frame = -1 / -3
Query: 629 SFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLG 450
S +RDKPRGV T TG V + V + E K+++NHLR DL+LV+ L+IV TNNA NH
Sbjct: 521 SLERDKPRGVCSTMTGLAVPNGFVSD*EFRKVMSNHLRFDLDLVKSLSIVHTNNASNHFR 342
Query: 449 DNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHV 270
N HV MG H+ LL I FR AQ LDE H LP + PS EELD+++ GHV
Sbjct: 341 HNHHVP*MGSHYFGLLTSWCI*FRFAQFLDESHRLPR*SSTHPSSYTGREELDKIISGHV 162
Query: 269 KQRIEVDAAVAVLAERPLL 213
K+ IE+D+ L ER LL
Sbjct: 161 KKSIEIDSFEGKLFERSLL 105
Score = 108 bits (230), Expect(2) = 5e-024
Identities = 41/85 (48%), Positives = 57/85 (67%)
Frame = +2 / +2
Query: 389 CSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAG 568
C+ EAR+SE+PS +H +DW+H WC+QW+D P DQ DDW L C +L+ LQ
Sbjct: 281 CTSW*EARSSENPSKEHGDYA*NDWKHYWCVQWKDF*PNRDQTGDDWTLPCGILNHLQTR 460
Query: 569 QAREARYWCHSLLAVYPSEMSCYPD 643
AR+AR WC++LL VYPS++ + D
Sbjct: 461 *ARQARSWCYTLL*VYPSQVKPFQD 535
Score = 25.4 bits (49), Expect(2) = 5e-024
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2 / +2
Query: 212 QEEDVPQVQLXXXXXXCAA*HVHRRPRPALPSARQEK 322
+EE+V +V L C++*H H ALP ++K
Sbjct: 104 EEENVQKVFLQRSRSRCSS*HAH**SCRALPFPYKKK 214
>ref|NM_120986.2| Arabidopsis thaliana structural constituent of ribosome AT5G09490
mRNA, complete cds
Length = 681
Score = 290 bits (627), Expect = 5e-077
Identities = 118/144 (81%), Positives = 132/144 (91%)
Frame = +3 / +3
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AA KKRTF+K+S++GVDLDALLDM TDDLV+LFP+R RRR RGL RKPMALIKKLRK
Sbjct: 90 AAALAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRMSRGLTRKPMALIKKLRK 269
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK DAP GEKPE V+THLRNM+I+PEMIGSI+GVYNGKTFNQ+EIKPEMIGHYLAEFSI+
Sbjct: 270 AKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIGHYLAEFSIT 449
Query: 558 YKPVKHGRPGIGATHSSRFIPLK* 629
YKPV+HG+PG GATHSSRFIPLK*
Sbjct: 450 YKPVRHGKPGHGATHSSRFIPLK* 521
Score = 189 bits (407), Expect = 1e-046
Identities = 92/159 (57%), Positives = 99/159 (62%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RGIN EE VAP PGLPCLTGL* +ENSAR* PIISGLIS WLKV PL TP MLPIISG
Sbjct: 520 HLRGINLEECVAP*PGLPCLTGL*VIENSAR*CPIISGLISIWLKVFPLYTPMMLPIISG 341
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
+ M RWV T SGFSP GAS FALR+FLM A+GFL PL LLL R GKS TR
Sbjct: 340 IITMFLRWVLTTSGFSPAGASSFALRNFLMRAIGFLVNPLLILLLIREGKSSTRSSVGMS 161
Query: 268 XXXXXSTPR*LYLRNVLFLXXXXXXXXXXXXXAMFEVKS 152
STP NVLF + ++S
Sbjct: 160 RRASRSTPLKENFLNVLFFARAAAETSGSTSAIVLGLRS 44
Score = 144 bits (308), Expect = 5e-033
Identities = 68/139 (48%), Positives = 86/139 (61%)
Frame = -1 / -2
Query: 629 SFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLG 450
S +RDKPRGV T TG V + V + E K+++NHLR DL+LV+ L+IV TN+A NH
Sbjct: 521 SLERDKPRGVCSTMTGLAVPNGFVSD*EFRKVMSNHLRFDLDLVKSLSIVHTNDASNHFR 342
Query: 449 DNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHV 270
N HV MG H+ LL I FR AQ LDE H LP + PS EELD+++ GHV
Sbjct: 341 HNHHVP*MGSHYFGLLTSWCI*FRFAQFLDESHRLPR*SSTHPSSYTGREELDKIISGHV 162
Query: 269 KQRIEVDAAVAVLAERPLL 213
K+ IE+D+ L ER LL
Sbjct: 161 KKSIEIDSFEGKLFERSLL 105
Score = 107 bits (229), Expect(2) = 7e-024
Identities = 41/85 (48%), Positives = 57/85 (67%)
Frame = +2 / +2
Query: 389 CSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAG 568
C+ EAR+SE+PS +H +DW+H WC+QW+D P DQ DDW L C +L+ LQ
Sbjct: 281 CTSW*EARSSENPSKEHGDYA*NDWKHHWCVQWKDF*PNRDQTGDDWTLPCGILNHLQTR 460
Query: 569 QAREARYWCHSLLAVYPSEMSCYPD 643
AR+AR WC++LL VYPS++ + D
Sbjct: 461 *ARQARSWCYTLL*VYPSQVKPFQD 535
Score = 25.4 bits (49), Expect(2) = 7e-024
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2 / +2
Query: 212 QEEDVPQVQLXXXXXXCAA*HVHRRPRPALPSARQEK 322
+EE+V +V L C++*H H ALP ++K
Sbjct: 104 EEENVQKVFLQRSRSRCSS*HAH**SCRALPFPYKKK 214
>gb|BE038827.1|BE038827 AB04G03 AB Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 729
Score = 272 bits (589), Expect(2) = 2e-076
Identities = 113/125 (90%), Positives = 120/125 (96%)
Frame = +3 / -1
Query: 255 LDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLR 434
LDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLR
Sbjct: 624 LDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLR 445
Query: 435 NMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRF 614
NMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRF
Sbjct: 444 NMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRF 265
Query: 615 IPLK* 629
IPLK*
Sbjct: 264 IPLK* 250
Score = 189 bits (407), Expect = 1e-046
Identities = 85/114 (74%), Positives = 90/114 (78%)
Frame = -2 / +2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 251 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 430
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTR 287
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 431 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTR 592
Score = 152 bits (326), Expect = 2e-035
Identities = 62/117 (52%), Positives = 82/117 (70%)
Frame = -1 / +1
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 277 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 456
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEV 252
HW WLL + FR QLL++ H LP QT EPS R EELD+++ H+++ IE+
Sbjct: 457 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEI 627
Score = 105 bits (223), Expect(2) = 1e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / -3
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 496 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 317
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 316 AGQAR*AWCWCYPLFQIH 263
Score = 36.3 bits (73), Expect(2) = 2e-076
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +3 / -2
Query: 198 AAGAPKKRTFRKYSYRGV 251
AAG PKKRTF+K++++GV
Sbjct: 680 AAGVPKKRTFKKFAFKGV 627
Score = 22.6 bits (43), Expect(2) = 1e-021
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / -2
Query: 180 DVEPEVAAGAPKKR 221
DVEPEVAA K+
Sbjct: 701 DVEPEVAAAGVPKK 660
>emb|Z23162.1|ATRBPS15B A.thaliana H1flk-3 gene, 3' end, and ribosomal protein S15 gene,
complete CDS
Length = 2780
Score = 195 bits (420), Expect(3) = 5e-072
Identities = 79/87 (90%), Positives = 84/87 (96%)
Frame = +3 / +3
Query: 369 LRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 548
L K K++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 1968 LIKQKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 2147
Query: 549 SISYKPVKHGRPGIGATHSSRFIPLK* 629
SISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 2148 SISYKPVKHGRPGVGATHSSRFIPLK* 2228
Score = 155 bits (332), Expect(3) = 1e-044
Identities = 67/85 (78%), Positives = 70/85 (82%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 2227 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 2048
Query: 448 TMIMLRRWVFTGSGFSPTGASFFAL 374
TMIM +WV TGSGFSP GAS F L
Sbjct: 2047 TMIMFLKWVLTGSGFSPCGASLFCL 1973
Score = 105 bits (223), Expect = 3e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / +2
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 1982 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 2161
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 2162 AGQAR*AWCWCYPLFQIH 2215
Score = 104 bits (221), Expect = 5e-021
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -1 / -1
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 2201 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 2022
Query: 422 LHWLWLL 402
HW WLL
Sbjct: 2021 SHWFWLL 2001
Score = 82.6 bits (174), Expect(3) = 5e-072
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = +3 / +2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRF 326
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRR+
Sbjct: 1235 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRY 1363
Score = 43.7 bits (89), Expect(3) = 1e-044
Identities = 16/40 (40%), Positives = 28/40 (70%)
Frame = -1 / -2
Query: 323 PSPGARWEELDEVVGGHVKQRIEVDAAVAVLAERPLLGST 204
PS R EELD+++ H+++ IE+++ L +RPLLG++
Sbjct: 1360 PSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNS 1241
Score = 42.8 bits (87), Expect(3) = 5e-072
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3 / +2
Query: 321 RFQRGLKRKPMALIKKLRKA 380
RF RGL RKPMALIKKLRKA
Sbjct: 1445 RFSRGLTRKPMALIKKLRKA 1504
Score = 29.9 bits (59), Expect(3) = 1e-044
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2 / -3
Query: 379 ALRSFLMSAMGFLFKPLWNL 320
A SFL+ A+GFL KPL NL
Sbjct: 1503 AFLSFLIRAIGFLVKPLENL 1444
>gb|AV536604.1|AV536604 AV536604 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0335R 5', mRNA
sequence
Length = 461
Score = 267 bits (578), Expect = 3e-070
Identities = 109/126 (86%), Positives = 120/126 (95%)
Frame = +3 / +2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 83 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 262
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 557
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 263 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 442
Query: 558 YKPVKH 575
YKPVKH
Sbjct: 443 YKPVKH 460
Score = 166 bits (358), Expect = 6e-040
Identities = 80/121 (66%), Positives = 84/121 (69%)
Frame = -2 / -3
Query: 574 CLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISGTMIMLRRWVFTGSGFSPT 395
CLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISGTMIM +WV TGSGFSP
Sbjct: 459 CLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISGTMIMFLKWVLTGSGFSPC 280
Query: 394 GASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXXXXXXXSTPR*LYLRNVLF 215
GAS FA SFL+ A+GFL KPL NLL R KS TR STP NVLF
Sbjct: 279 GASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDISRRASRSTPLKANFLNVLF 100
Query: 214 L 212
L
Sbjct: 99 L 97
Score = 154 bits (330), Expect = 4e-036
Identities = 63/124 (50%), Positives = 88/124 (70%)
Frame = -1 / -2
Query: 575 VLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMGLHWLWLLAD 396
VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G HW WLL
Sbjct: 460 VLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVGSHWFWLLTL 281
Query: 395 RSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAAVAVLAERPL 216
+ FR QLL++ H LP QT EPS R EELD+++ H+++ IE+++ L +RPL
Sbjct: 280 WCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPL 101
Query: 215 LGST 204
LG++
Sbjct: 100 LGNS 89
>gb|AV545466.1|AV545466 AV545466 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ84a04F 3', mRNA sequence
Length = 561
Score = 267 bits (577), Expect = 4e-070
Identities = 111/132 (84%), Positives = 121/132 (91%)
Frame = +3 / -1
Query: 258 DALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRN 437
DALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPE V++HLRN
Sbjct: 561 DALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPAGEKPEAVRSHLRN 382
Query: 438 MIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFI 617
MIIVPEMIGSI+GVYNGKTF QVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFI
Sbjct: 381 MIIVPEMIGSIIGVYNGKTFKQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFI 202
Query: 618 PLK*VVTQICSV 653
PLK* ++C V
Sbjct: 201 PLK*RPYRVCVV 166
Score = 186 bits (401), Expect = 7e-046
Identities = 86/122 (70%), Positives = 91/122 (74%)
Frame = -2 / +2
Query: 652 TLQIWVTTHFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TP 473
T Q H RG+N EE VAP PGLPCLTGL EMENSAR* PIISGLIST LKV PL TP
Sbjct: 167 TTQTLYGLHLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTCLKVFPLYTP 346
Query: 472 TMLPIISGTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSW 293
MLPIISGTMIM +W+ T SGFSP GAS FALRSFL+ A+GFL PL NLL R KS
Sbjct: 347 MMLPIISGTMIMFLKWLLTASGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSL 526
Query: 292 TR 287
TR
Sbjct: 527 TR 532
Score = 151 bits (324), Expect = 3e-035
Identities = 64/130 (49%), Positives = 88/130 (67%)
Frame = -1 / +1
Query: 647 TDLGNNSFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNN 468
TD +S +RD+P GV TN P VL+ LV +GELCK+++NHLRLDL+L+E L+IV TN+
Sbjct: 172 TDSVWSSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLLESLSIVHTND 351
Query: 467 APNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDE 288
A NH NDHV ++ H WLL + FRLA+ L++ H L Q+ EPS EELD+
Sbjct: 352 ASNHFRHNDHVPQVASHCFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDK 531
Query: 287 VVGGHVKQRI 258
++G HV++ I
Sbjct: 532 IIGRHVEKSI 561
Score = 118 bits (253), Expect = 2e-025
Identities = 45/81 (55%), Positives = 56/81 (69%)
Frame = +2 / -3
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
EAR+SE P +HDHC +DW+H WC+QW+D Q DQA*DDW L CRVLH +QA AR A
Sbjct: 415 EARSSEKPLEEHDHCA*NDWKHHWCVQWKDFQASGDQA*DDWTLPCRVLHLVQAS*AR*A 236
Query: 584 RYWCHSLLAVYPSEMSCYPDL 646
WC+ LL V+PS++ L
Sbjct: 235 WRWCYPLLQVHPSQVKTIQSL 173
>emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5, BAC clone T5E8 (ESSA project)
Length = 103534
Score = 199 bits (430), Expect(3) = 7e-070
Identities = 80/95 (84%), Positives = 88/95 (92%)
Frame = +3 / -3
Query: 369 LRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 548
+R K++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 96743 MRDQKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 96564
Query: 549 SISYKPVKHGRPGIGATHSSRFIPLK*VVTQICSV 653
SISYKPVKHGRPG+GATHSSRFIPLK* ++C V
Sbjct: 96563 SISYKPVKHGRPGVGATHSSRFIPLK*RPYRVCVV 96459
Score = 185 bits (399), Expect(2) = 5e-063
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +3 / -1
Query: 369 LRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 548
L + K +AP GEKP V+THLRNMIIVPEMIGS++GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 95089 LYEQKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEF 94910
Query: 549 SISYKPVKHGRPGIGATHSSRFIPLK*VVTQICS 650
SISYKPVKHGRPG+GAT+SSRFIPLK*++ + S
Sbjct: 94909 SISYKPVKHGRPGVGATNSSRFIPLK*IIKLLWS 94808
Score = 180 bits (388), Expect(3) = 2e-063
Identities = 71/83 (85%), Positives = 79/83 (95%)
Frame = +3 / -2
Query: 381 KKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISY 560
K DAP GEKPE V+THLRNM+I+PEMIGSI+GVYNGKTFNQ+EIKPEMIGHYLAEFSI+Y
Sbjct: 93411 KLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIGHYLAEFSITY 93232
Query: 561 KPVKHGRPGIGATHSSRFIPLK* 629
KPV+HG+PG GATHSSRFIPLK*
Sbjct: 93231 KPVRHGKPGHGATHSSRFIPLK* 93163
Score = 157 bits (337), Expect(3) = 1e-041
Identities = 69/91 (75%), Positives = 71/91 (78%)
Frame = -2 / +1
Query: 652 TLQIWVTTHFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TP 473
T Q H RG+N EE VAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP
Sbjct: 96460 TTQTLYGLHLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTP 96639
Query: 472 TMLPIISGTMIMLRRWVFTGSGFSPTGASFF 380
MLPIISGTMIM +WV TGSGFSP GAS F
Sbjct: 96640 MMLPIISGTMIMFLKWVLTGSGFSPAGASLF 96732
Score = 151 bits (325), Expect(3) = 1e-036
Identities = 68/103 (66%), Positives = 76/103 (73%)
Frame = -2 / +3
Query: 688 KAERAMPLDTLGTLQIWVTTHFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLI 509
K +R + ++ L + H RGIN EE VAP PGLPCLTGL E+ENSA+* PIISGLI
Sbjct: 94770 KKKRKTRI*SITKLHKSLIIHLRGINLEELVAPTPGLPCLTGLYEIENSAK*CPIISGLI 94949
Query: 508 STWLKVLPL*TPTMLPIISGTMIMLRRWVFTGSGFSPTGASFF 380
STWLKV PL*TP LPIISGTMIM RWV T +GFSP GAS F
Sbjct: 94950 STWLKVFPL*TPMTLPIISGTMIMFLRWVLTAAGFSPAGASIF 95078
Score = 140 bits (301), Expect(3) = 6e-038
Identities = 63/83 (75%), Positives = 65/83 (78%)
Frame = -2 / +2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RGIN EE VAP PGLPCLTGL* +ENSAR* PIISGLIS WLKV PL TP MLPIISG
Sbjct: 93164 HLRGINLEECVAP*PGLPCLTGL*VIENSAR*CPIISGLISIWLKVFPLYTPMMLPIISG 93343
Query: 448 TMIMLRRWVFTGSGFSPTGASFF 380
+ M RWV T SGFSP GAS F
Sbjct: 93344 IITMFLRWVLTTSGFSPAGASSF 93412
Score = 122 bits (262), Expect = 1e-026
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / -2
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
EAR SE+P +HDHC +DW+H WC+QW+D QP DQA*DDW L CRVLH +QA AR A
Sbjct: 96708 EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS*AR*A 96529
Query: 584 RYWCHSLLAVYPSEMSCYPDL 646
WC+ LL V+PS++ L
Sbjct: 96528 WRWCYPLLQVHPSQVKTIQSL 96466
Score = 120 bits (257), Expect = 5e-026
Identities = 49/89 (55%), Positives = 63/89 (70%)
Frame = -1 / +3
Query: 647 TDLGNNSFQRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNN 468
TD +S +RD+P GV TN P VL+ LV +GELCK+++NHLRLDL+LVE L+IV TN+
Sbjct: 96465 TDSVWSSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTND 96644
Query: 467 APNHLGDNDHVAEMGLHWLWLLADRSILF 381
A NH NDHV ++G HW WLL + F
Sbjct: 96645 ASNHFRHNDHVPQVGSHWFWLLTSWCLSF 96731
Score = 107 bits (229), Expect(2) = 2e-026
Identities = 41/85 (48%), Positives = 57/85 (67%)
Frame = +2 / -1
Query: 389 CSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAG 568
C+ EAR+SE+PS +H +DW+H WC+QW+D P DQ DDW L C +L+ LQ
Sbjct: 93403 CTSW*EARSSENPSKEHGDYA*NDWKHHWCVQWKDF*PNRDQTGDDWTLPCGILNHLQTR 93224
Query: 569 QAREARYWCHSLLAVYPSEMSCYPD 643
AR+AR WC++LL VYPS++ + D
Sbjct: 93223 *ARQARSWCYTLL*VYPSQVKPFQD 93149
Score = 88.1 bits (186), Expect(2) = 5e-063
Identities = 35/57 (61%), Positives = 47/57 (82%)
Frame = +3 / -3
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKK 368
AAG KKRTF+K+S+RGVDLDALLDMSTDDLV+LFP+R RRR + L ++ ++ ++
Sbjct: 95519 AAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRLEDSLNQRALSQFRR 95349
Score = 81.3 bits (171), Expect(3) = 7e-070
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = +3 / -1
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRR 323
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRR
Sbjct: 97213 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRR 97088
Score = 80.3 bits (169), Expect(3) = 2e-063
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3 / -1
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRF 326
AA KKRTF+K+S++GVDLDALLDM TDDLV+LFP+R RRRF
Sbjct: 93844 AAALAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRF 93716
Score = 43.2 bits (88), Expect(2) = 2e-026
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3 / -3
Query: 321 RFQRGLKRKPMALIKKLRKAKKDA 392
RF RGL RKPMALIKKLRKA +++
Sbjct: 95306 RFSRGLTRKPMALIKKLRKAVQNS 95235
Score = 42.8 bits (87), Expect(3) = 7e-070
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3 / -2
Query: 321 RFQRGLKRKPMALIKKLRKA 380
RF RGL RKPMALIKKLRKA
Sbjct: 97005 RFSRGLTRKPMALIKKLRKA 96946
Score = 41.8 bits (85), Expect(3) = 6e-038
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = -1 / +2
Query: 326 EPSPGARWEELDEVVGGHVKQRIEVDAAVAVLAERPLL 213
+PS EELD+++ GHVK+ IE+D+ L ER LL
Sbjct: 93716 KPSSYTGREELDKIISGHVKKSIEIDSFEGKLFERSLL 93829
Score = 41.4 bits (84), Expect(3) = 2e-063
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3 / -1
Query: 321 RFQRGLKRKPMALIKKLRKAKK 386
R RGL RKPMALIKKLRKA K
Sbjct: 93634 RMSRGLTRKPMALIKKLRKAVK 93569
Score = 38.6 bits (78), Expect(3) = 1e-041
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / +2
Query: 323 PSPGARWEELDEVVGGHVKQRIEVDAAVAVLAERPLL 213
PS EELD+++G HV++ IE+D+ ER LL
Sbjct: 97088 PSANTGREELDKIIGRHVEKSIEIDSFEGEFLERSLL 97198
Score = 33.6 bits (67), Expect(3) = 6e-038
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2 / +3
Query: 388 SFFALRSFLMSAMGFLFKPL 329
SF ALR+FLM A+GFL PL
Sbjct: 93567 SFTALRNFLMRAIGFLVNPL 93626
Score = 33.1 bits (66), Expect(3) = 1e-041
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2 / +2
Query: 379 ALRSFLMSAMGFLFKPLWNL 320
ALRSFL+ A+GFL PL NL
Sbjct: 96947 ALRSFLIKAIGFLVNPLENL 97006
Score = 31.3 bits (62), Expect(3) = 1e-036
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2 / +1
Query: 379 ALRSFLMSAMGFLFKPLWNL 320
A RSFL+ A+GFL PL NL
Sbjct: 95248 AFRSFLIKAIGFLVNPLENL 95307
Score = 28.6 bits (56), Expect(3) = 1e-036
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -2 / +1
Query: 340 FKPLWNLLLARAGKSWTRXXXXXXXXXXXSTPR*LYLRNVLF 215
FK NLL R GKS TR STP NVLF
Sbjct: 95377 FKESSNLLRIREGKSLTRSSVDMSRRASRSTPLKENFLNVLF 95502
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 107527
Score = 195 bits (420), Expect(3) = 7e-069
Identities = 79/87 (90%), Positives = 84/87 (96%)
Frame = +3 / +3
Query: 369 LRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 548
L K K++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 91092 LIKQKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 91271
Query: 549 SISYKPVKHGRPGIGATHSSRFIPLK* 629
SISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 91272 SISYKPVKHGRPGVGATHSSRFIPLK* 91352
Score = 155 bits (332), Expect(3) = 2e-041
Identities = 67/85 (78%), Positives = 70/85 (82%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 91351 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 91172
Query: 448 TMIMLRRWVFTGSGFSPTGASFFAL 374
TMIM +WV TGSGFSP GAS F L
Sbjct: 91171 TMIMFLKWVLTGSGFSPCGASLFCL 91097
Score = 105 bits (223), Expect = 3e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / +2
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 91106 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 91285
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 91286 AGQAR*AWCWCYPLFQIH 91339
Score = 104 bits (221), Expect = 5e-021
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -1 / -3
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 91325 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 91146
Query: 422 LHWLWLL 402
HW WLL
Sbjct: 91145 SHWFWLL 91125
Score = 82.6 bits (174), Expect(3) = 7e-069
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = +3 / +2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRF 326
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRR+
Sbjct: 90359 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRY 90487
Score = 43.7 bits (89), Expect(3) = 2e-041
Identities = 16/40 (40%), Positives = 28/40 (70%)
Frame = -1 / -1
Query: 323 PSPGARWEELDEVVGGHVKQRIEVDAAVAVLAERPLLGST 204
PS R EELD+++ H+++ IE+++ L +RPLLG++
Sbjct: 90484 PSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNS 90365
Score = 42.8 bits (87), Expect(3) = 7e-069
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3 / +2
Query: 321 RFQRGLKRKPMALIKKLRKA 380
RF RGL RKPMALIKKLRKA
Sbjct: 90569 RFSRGLTRKPMALIKKLRKA 90628
Score = 29.9 bits (59), Expect(3) = 2e-041
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2 / -2
Query: 379 ALRSFLMSAMGFLFKPLWNL 320
A SFL+ A+GFL KPL NL
Sbjct: 90627 AFLSFLIRAIGFLVKPLENL 90568
>gb|AV553829.1|AV553829 AV553829 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ73e06R 5', mRNA sequence
Length = 477
Score = 217 bits (469), Expect(2) = 1e-067
Identities = 89/106 (83%), Positives = 100/106 (94%)
Frame = +3 / +1
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 85 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 264
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIK 515
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIK
Sbjct: 265 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIK 402
Score = 132 bits (282), Expect(2) = 3e-037
Identities = 63/101 (62%), Positives = 66/101 (65%)
Frame = -2 / -2
Query: 514 LISTWLKVLPL*TPTMLPIISGTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFK 335
LISTWLKV PL TP MLPIISGTMIM +WV TGSGFSP GAS FA SFL+ A+GFL K
Sbjct: 401 LISTWLKVFPLYTPMMLPIISGTMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVK 222
Query: 334 PLWNLLLARAGKSWTRXXXXXXXXXXXSTPR*LYLRNVLFL 212
PL NLL R KS TR STP NVLFL
Sbjct: 221 PLENLLRIREEKSLTRSSVDISRRASRSTPLKANFLNVLFL 99
Score = 126 bits (270), Expect(2) = 7e-033
Identities = 50/105 (47%), Positives = 73/105 (69%)
Frame = -1 / -1
Query: 518 RLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPL 339
+LDLNLVE L++V +N+A NH D+DHV ++G HW WLL + FR QLL++ H LP
Sbjct: 405 QLDLNLVESLSVVHSNDASNHFRDDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPC 226
Query: 338 QTPLEPSPGARWEELDEVVGGHVKQRIEVDAAVAVLAERPLLGST 204
QT EPS R EELD+++ H+++ IE+++ L +RPLLG++
Sbjct: 225 QTSREPSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNS 91
Score = 62.0 bits (129), Expect(2) = 1e-067
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3 / +3
Query: 519 EMIGHYLAEFSISYKPVKHGRPGI 590
EMIGHYLAEFSISYKPVKHGRPG+
Sbjct: 405 EMIGHYLAEFSISYKPVKHGRPGV 476
Score = 46.0 bits (94), Expect(2) = 3e-037
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -2 / -3
Query: 586 PGLPCLTGL*EMENSAR*WPIIS 518
PGLPCLTGL E+ENSAR* PIIS
Sbjct: 472 PGLPCLTGLYEIENSAR**PIIS 404
Score = 36.8 bits (74), Expect(2) = 7e-033
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1 / -2
Query: 590 NTGPPVLDRLVGNGELCKIVANHLRL 513
NT P VLDRLV + EL ++V NHL L
Sbjct: 476 NTRPTVLDRLV*DRELSQVVTNHLSL 399
>gb|AV565619.1|AV565619 AV565619 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ227f09F 3', mRNA sequence
Length = 596
Score = 253 bits (547), Expect = 5e-066
Identities = 104/116 (89%), Positives = 111/116 (95%)
Frame = +3 / -1
Query: 282 DDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMI 461
DDLV+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMI
Sbjct: 596 DDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMI 417
Query: 462 GSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
GSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 416 GSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 249
Score = 189 bits (407), Expect = 1e-046
Identities = 85/114 (74%), Positives = 90/114 (78%)
Frame = -2 / +1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 250 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 429
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTR 287
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS TR
Sbjct: 430 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTR 591
Score = 142 bits (304), Expect = 2e-032
Identities = 59/107 (55%), Positives = 75/107 (70%)
Frame = -1 / +3
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 276 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 455
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVV 282
HW WLL + FR QLL++ H LP QT EPS R EELD+++
Sbjct: 456 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKII 596
Score = 105 bits (223), Expect = 3e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / -3
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 495 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 316
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 315 AGQAR*AWCWCYPLFQIH 262
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 195 bits (420), Expect(3) = 1e-064
Identities = 79/87 (90%), Positives = 84/87 (96%)
Frame = +3 / -1
Query: 369 LRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 548
L K K++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 1142187 LIKQKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 1142008
Query: 549 SISYKPVKHGRPGIGATHSSRFIPLK* 629
SISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 1142007 SISYKPVKHGRPGVGATHSSRFIPLK* 1141927
Score = 155 bits (332), Expect(2) = 2e-038
Identities = 67/85 (78%), Positives = 70/85 (82%)
Frame = -2 / +2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 1141928 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 1142107
Query: 448 TMIMLRRWVFTGSGFSPTGASFFAL 374
TMIM +WV TGSGFSP GAS F L
Sbjct: 1142108 TMIMFLKWVLTGSGFSPCGASLFCL 1142182
Score = 105 bits (223), Expect(3) = 2e-035
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / -3
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 1142173 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 1141994
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 1141993 AGQAR*AWCWCYPLFQIH 1141940
Score = 104 bits (221), Expect(3) = 6e-022
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -1 / +1
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 1141954 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 1142133
Query: 422 LHWLWLL 402
HW WLL
Sbjct: 1142134 SHWFWLL 1142154
Score = 82.6 bits (174), Expect(3) = 1e-064
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = +3 / -3
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRF 326
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRR+
Sbjct: 1142920 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRY 1142792
Score = 73.5 bits (154), Expect(3) = 2e-035
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +3 / -3
Query: 195 VAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRR 323
VAAG KKR F+K+S+RGVDLDALLDMST+DLV+ F +R RRR
Sbjct: 12296971 VAAGIVKKRIFKKFSFRGVDLDALLDMSTEDLVKHFSSRIRRR 12296843
Score = 43.7 bits (89), Expect(2) = 2e-038
Identities = 16/40 (40%), Positives = 28/40 (70%)
Frame = -1 / +2
Query: 323 PSPGARWEELDEVVGGHVKQRIEVDAAVAVLAERPLLGST 204
PS R EELD+++ H+++ IE+++ L +RPLLG++
Sbjct: 1142795 PSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNS 1142914
Score = 43.2 bits (88), Expect(3) = 2e-035
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3 / -1
Query: 318 RRFQRGLKRKPMALIKKLRKAKK 386
+RF RG RKPMALIKKLRKA K
Sbjct: 12296763 KRFSRGFTRKPMALIKKLRKAVK 12296695
Score = 42.8 bits (87), Expect(3) = 1e-064
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3 / -3
Query: 321 RFQRGLKRKPMALIKKLRKA 380
RF RGL RKPMALIKKLRKA
Sbjct: 1142710 RFSRGLTRKPMALIKKLRKA 1142651
Score = 36.3 bits (73), Expect(3) = 6e-022
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1 / +2
Query: 323 PSPGARWEELDEVVGGHVKQRIEVDAAVAVLAERPL 216
PS E D++ GGHV++RIE+D++ L E L
Sbjct: 12296843 PSANTGTEMFDKIFGGHVEKRIEIDSSERKLLEDSL 12296950
Score = 35.4 bits (71), Expect(3) = 6e-022
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 385 FFALRSFLMSAMGFLFKPLWNLL 317
F ALR+FL+ A+GFL PL NLL
Sbjct: 12296696 FTALRNFLIKAIGFLVNPLENLL 12296764
>gb|N37540.1|N37540 18767 Lambda-PRL2 Arabidopsis thaliana cDNA clone 205M16T7, mRNA
sequence
Length = 528
Score = 247 bits (534), Expect = 3e-064
Identities = 100/119 (84%), Positives = 112/119 (94%)
Frame = +3 / +2
Query: 198 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 377
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 20 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 199
Query: 378 AKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSI 554
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGK FNQVE+KPEMIGHYLAEFSI
Sbjct: 200 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKAFNQVEVKPEMIGHYLAEFSI 376
Score = 154 bits (331), Expect = 3e-036
Identities = 73/114 (64%), Positives = 77/114 (67%)
Frame = -2 / -1
Query: 556 EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISGTMIMLRRWVFTGSGFSPTGASFFA 377
+MENSAR* PIISGL STWLK PL TP MLPIISGTMIM +WV TGSGFSP GAS FA
Sbjct: 378 KMENSAR*CPIISGLTSTWLKAFPLYTPMMLPIISGTMIMFLKWVLTGSGFSPAGASLFA 199
Query: 376 LRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXXXXXXXSTPR*LYLRNVLF 215
LRSFL+ A+GFL PL NLL R KS TR STP NVLF
Sbjct: 198 LRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMSRRASRSTPLKANFLNVLF 37
Score = 142 bits (304), Expect = 2e-032
Identities = 57/114 (50%), Positives = 79/114 (69%)
Frame = -1 / -3
Query: 554 NGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMGLHWLWLLADRSILFRL 375
+G+LCK+++NHLRLDL+LVE L+IV TN+A NH NDHV ++G HW WLL + FRL
Sbjct: 376 DGKLCKVMSNHLRLDLHLVESLSIVHTNDASNHFRHNDHVPQVGSHWFWLLTSWCLSFRL 197
Query: 374 AQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAAVAVLAERPLL 213
A+ L++ H L Q+ EPS EELD+++G HV++ IE+D+ ER LL
Sbjct: 196 AEFLNQSHRLSRQSSREPSANTGREELDKIIGRHVEKSIEIDSFEGEFLERSLL 35
>gb|BP582590.1|BP582590 BP582590 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-36-N16 3',
mRNA sequence
Length = 455
Score = 246 bits (531), Expect = 8e-064
Identities = 101/113 (89%), Positives = 108/113 (95%)
Frame = +3 / -2
Query: 291 VQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSI 470
V+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI
Sbjct: 454 VKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSI 275
Query: 471 VGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 274 IGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 116
Score = 187 bits (402), Expect = 5e-046
Identities = 84/113 (74%), Positives = 89/113 (78%)
Frame = -2 / +3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 117 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 296
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWT 290
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS T
Sbjct: 297 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLT 455
Score = 138 bits (297), Expect = 2e-031
Identities = 59/104 (56%), Positives = 72/104 (69%)
Frame = -1 / +2
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 143 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 322
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELD 291
HW WLL + FR QLL++ H LP QT EPS R EELD
Sbjct: 323 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELD 454
Score = 105 bits (223), Expect = 3e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / -1
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 362 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 183
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 182 AGQAR*AWCWCYPLFQIH 129
>gb|BP619574.1|BP619574 BP619574 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-33-M09 3',
mRNA sequence
Length = 451
Score = 246 bits (531), Expect = 8e-064
Identities = 101/113 (89%), Positives = 108/113 (95%)
Frame = +3 / -2
Query: 291 VQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSI 470
V+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI
Sbjct: 450 VKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSI 271
Query: 471 VGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 270 IGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 112
Score = 187 bits (402), Expect = 5e-046
Identities = 84/113 (74%), Positives = 89/113 (78%)
Frame = -2 / +2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 113 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 292
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWT 290
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R KS T
Sbjct: 293 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLT 451
Score = 138 bits (297), Expect = 2e-031
Identities = 59/104 (56%), Positives = 72/104 (69%)
Frame = -1 / +1
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 139 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 318
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELD 291
HW WLL + FR QLL++ H LP QT EPS R EELD
Sbjct: 319 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELD 450
Score = 105 bits (223), Expect = 3e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / -1
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 358 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 179
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 178 AGQAR*AWCWCYPLFQIH 125
>dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9D7
Length = 60476
Score = 182 bits (393), Expect(3) = 2e-063
Identities = 74/83 (89%), Positives = 79/83 (95%)
Frame = +3 / +2
Query: 381 KKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISY 560
K +AP GEKP V+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISY
Sbjct: 56030 KMEAPAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISY 56209
Query: 561 KPVKHGRPGIGATHSSRFIPLK* 629
KPVKHGRPG+GAT+SSRFIPLK*
Sbjct: 56210 KPVKHGRPGVGATNSSRFIPLK* 56278
Score = 142 bits (305), Expect(3) = 3e-036
Identities = 62/87 (71%), Positives = 68/87 (78%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RGIN EE VAP PGLPC TGL E+ENSA+* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 56277 HLRGINLEELVAPTPGLPCFTGLYEIENSAK*CPIISGLISTWLKVFPLYTPMMLPIISG 56098
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRS 368
TMIM + V T +GFSP GAS F ++
Sbjct: 56097 TMIMFLKCVLTDAGFSPAGASIFCSKT 56017
Score = 73.5 bits (154), Expect(3) = 2e-063
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +3 / +1
Query: 195 VAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRR 323
VAAG KKRTF+K+S+RGVDLDALLDMS +DLV+ F +R RRR
Sbjct: 55225 VAAGIVKKRTFKKFSFRGVDLDALLDMSIEDLVKHFSSRIRRR 55353
Score = 44.1 bits (90), Expect(3) = 2e-063
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 321 RFQRGLKRKPMALIKKLRKAKK 386
RF RGL RKPMALIKKLRKA K
Sbjct: 55434 RFSRGLTRKPMALIKKLRKAVK 55499
Score = 33.6 bits (67), Expect(3) = 3e-036
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 385 FFALRSFLMSAMGFLFKPLWNL 320
F ALR+FL+ A+GFL PL NL
Sbjct: 55498 FTALRNFLIKAIGFLVNPLENL 55433
Score = 32.7 bits (65), Expect(3) = 3e-036
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1 / -3
Query: 323 PSPGARWEELDEVVGGHVKQRIEVDAAVAVLAERPL 216
PS E D++ GHV++RIE+D++ L E L
Sbjct: 55353 PSANTGTEMFDKIFDGHVEKRIEIDSSERKLFEGSL 55246
>gb|AW004145.1|AW004145 701500185 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701500185, mRNA sequence
Length = 631
Score = 200 bits (432), Expect(2) = 1e-062
Identities = 83/113 (73%), Positives = 97/113 (85%)
Frame = +3 / -2
Query: 201 AGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKA 380
AG PKKRT +K++++GV LDALLDMST+DLV+LF +R RRRF RGL KPMALI LRKA
Sbjct: 591 AGVPKKRTSKKFAFKGVHLDALLDMSTNDLVKLFSSRIRRRFSRGLTCKPMALIHTLRKA 412
Query: 381 KKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYL 539
+DAP GEKPEPV+THLRNMII PEMIGSI+GVYNG+T +QVEIKPEMI Y+
Sbjct: 411 HRDAPQGEKPEPVRTHLRNMIIFPEMIGSIIGVYNGETLDQVEIKPEMIAQYV 253
Score = 122 bits (262), Expect(2) = 9e-036
Identities = 50/111 (45%), Positives = 74/111 (66%)
Frame = -1 / +1
Query: 536 IVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDE 357
+++NHLRLDLNLVE L++V +N+A NH ++DHV ++G HW WLL I R Q +++
Sbjct: 256 VLSNHLRLDLNLVESLSVVHSNDASNHFREDDHVPQVGSHWFWLLTLWCIPVRFPQRVNQ 435
Query: 356 RHGLPLQTPLEPSPGARWEELDEVVGGHVKQRIEVDAAVAVLAERPLLGST 204
H L QT EPS R EELD+++ H++ IE+++ L RPLLG++
Sbjct: 436 SHWLTCQTSREPSTNTR*EELDKIISRHIE*SIEMNSFEGKLLRRPLLGNS 588
Score = 111 bits (237), Expect = 3e-023
Identities = 57/105 (54%), Positives = 62/105 (59%)
Frame = -2 / +2
Query: 526 IISGLISTWLKVLPL*TPTMLPIISGTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMG 347
IISGLISTW +V PL TP MLPIISG MIM +WV TGSGFSP GAS A S + A+G
Sbjct: 266 IISGLISTWSRVSPLYTPMMLPIISGKMIMFLKWVLTGSGFSPCGASLCAFLSV*IRAIG 445
Query: 346 FLFKPLWNLLLARAGKSWTRXXXXXXXXXXXSTPR*LYLRNVLFL 212
KPL NLL R KS TR TP +VLFL
Sbjct: 446 LHVKPLENLLRIRDEKSLTRSLVDISSRASR*TPLKANFLDVLFL 580
Score = 62.0 bits (129), Expect(2) = 1e-062
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +3 / -3
Query: 540 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
AEFSISYKPVKH PG+GAT SSRFIPLK*
Sbjct: 251 AEFSISYKPVKHCMPGVGATDSSRFIPLK* 162
Score = 50.1 bits (103), Expect(2) = 9e-036
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = -2 / +1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSA 539
H RG+N EE VAP PG+ C TGL E+ENSA
Sbjct: 163 HLRGMNLEESVAPTPGIQCFTGLYEIENSA 252
>gb|AV532062.1|AV532062 AV532062 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB035a04F 3', mRNA sequence
Length = 508
Score = 237 bits (511), Expect = 5e-061
Identities = 96/108 (88%), Positives = 104/108 (96%)
Frame = +3 / -2
Query: 306 ARARRRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYN 485
+R R+RF +GL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYN
Sbjct: 504 SRIRKRFSKGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYN 325
Query: 486 GKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
GKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 324 GKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 181
Score = 182 bits (393), Expect = 9e-045
Identities = 81/107 (75%), Positives = 86/107 (80%)
Frame = -2 / +2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 182 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 361
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLAR 308
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KPL NLL R
Sbjct: 362 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIR 502
Score = 127 bits (271), Expect = 6e-028
Identities = 54/99 (54%), Positives = 67/99 (67%)
Frame = -1 / +1
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV + EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 208 VGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 387
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGAR 306
HW WLL + FR QLL++ H LP QT EP R
Sbjct: 388 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQTFREPFTNTR 504
Score = 105 bits (223), Expect = 3e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / -1
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 427 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 248
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 247 AGQAR*AWCWCYPLFQIH 194
>gb|BP594448.1|BP594448 BP594448 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-25-O18 3',
mRNA sequence
Length = 459
Score = 223 bits (481), Expect(2) = 4e-060
Identities = 91/99 (91%), Positives = 96/99 (96%)
Frame = +3 / -3
Query: 333 GLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEI 512
GL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEI
Sbjct: 406 GLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEI 227
Query: 513 KPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
KPEMIGHYLAEFS SYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 226 KPEMIGHYLAEFSTSYKPVKHGRPGVGATHSSRFIPLK* 110
Score = 175 bits (376), Expect = 2e-042
Identities = 76/99 (76%), Positives = 81/99 (81%)
Frame = -2 / +3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 111 HLRGMNLEEWVAPTPGLPCLTGLYEVENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 290
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKP 332
TMIM +WV TGSGFSP GAS FA SFL+ A+GFL KP
Sbjct: 291 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKP 407
Score = 122 bits (262), Expect = 1e-026
Identities = 51/90 (56%), Positives = 63/90 (70%)
Frame = -1 / +2
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDNDHVAEMG 423
V TNT P VLDRLV EL ++V NHLRLDLNLVE L++V +N+A NH D+DHV ++G
Sbjct: 137 VGSTNTRPTVLDRLV*GRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVG 316
Query: 422 LHWLWLLADRSILFRLAQLLDERHGLPLQT 333
HW WLL + FR QLL++ H LP QT
Sbjct: 317 SHWFWLLTLWCLPFRFPQLLNQSHWLPCQT 406
Score = 105 bits (223), Expect = 3e-021
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2 / -2
Query: 383 KGCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQ 562
KG + R EAR SE+P +HDH P +DW+H W +Q +D QPG*DQA*DDW L VL+ +Q
Sbjct: 356 KGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLIQ 177
Query: 563 AGQAREARYWCHSLLAVY 616
AGQAR A WC+ L ++
Sbjct: 176 AGQAR*AWCWCYPLFQIH 123
Score = 31.3 bits (62), Expect(2) = 4e-060
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3 / -2
Query: 282 DDLVQLFPARARRRFQRGLKRK 347
DDLV+LF +R RRF RG ++
Sbjct: 458 DDLVKLFSSRIPRRFSRGFDKE 393
>gb|BP618355.1|BP618355 BP618355 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-27-P19 3',
mRNA sequence
Length = 453
Score = 160 bits (343), Expect(2) = 4e-060
Identities = 66/77 (85%), Positives = 72/77 (93%)
Frame = +3 / -3
Query: 282 DDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMI 461
DDLV+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMI
Sbjct: 451 DDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMI 272
Query: 462 GSIVGVYNGKTFNQVEI 512
GSI+GVYNGKTFNQVEI
Sbjct: 271 GSIIGVYNGKTFNQVEI 221
Score = 123 bits (263), Expect(2) = 2e-041
Identities = 55/76 (72%), Positives = 58/76 (76%)
Frame = -2 / +3
Query: 514 LISTWLKVLPL*TPTMLPIISGTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFK 335
LISTWLKV PL TP MLPIISGTMIM +WV TGSGFSP GAS FA SFL+ A+GFL K
Sbjct: 219 LISTWLKVFPLYTPMMLPIISGTMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVK 398
Query: 334 PLWNLLLARAGKSWTR 287
PL NLL R KS TR
Sbjct: 399 PLENLLRIREEKSLTR 446
Score = 101 bits (215), Expect(2) = 2e-027
Identities = 40/77 (51%), Positives = 53/77 (68%)
Frame = -1 / +2
Query: 512 DLNLVEGLAIVDTNNAPNHLGDNDHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQT 333
DLNLVE L++V +N+A NH D+DHV ++G HW WLL + FR QLL++ H LP QT
Sbjct: 221 DLNLVESLSVVHSNDASNHFRDDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQT 400
Query: 332 PLEPSPGARWEELDEVV 282
EPS R EELD+++
Sbjct: 401 SREPSTNTRREELDKII 451
Score = 94.5 bits (200), Expect(2) = 4e-060
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3 / -2
Query: 513 KPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
+PEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 221 QPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 105
Score = 68.9 bits (144), Expect(2) = 2e-041
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = -2 / +1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISG 515
H RG+N EE VAP PGLPCLTGL E+ENSAR* PIISG
Sbjct: 106 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISG 219
Score = 43.7 bits (89), Expect(2) = 2e-027
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -1 / +3
Query: 602 VSGTNTGPPVLDRLVGNGELCKIVANHLRL 513
V TNT P VLDRLV + EL ++V NHLRL
Sbjct: 132 VGSTNTRPTVLDRLV*DRELSQVVTNHLRL 221
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,555,685,389
Number of Sequences: 1013581
Number of extensions: 19946806
Number of successful extensions: 132470
Number of sequences better than 1.0e-020: 215
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 55399444650
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)