TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441100.2.1
(646 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY133709.1| Arabidopsis thaliana clone C103301 putative ... 127 2e-028
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 127 2e-028
emb|AL080253.2|ATF9F13 Arabidopsis thaliana DNA chromosome ... 127 2e-028
emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosom... 127 2e-028
ref|NM_118165.2| Arabidopsis thaliana NAD binding / UDP-glu... 127 2e-028
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 127 2e-028
gb|AV544700.1|AV544700 AV544700 Arabidopsis thaliana roots ... 126 6e-028
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 126 6e-028
gb|AF325108.1|AF325108 Arabidopsis thaliana unknown protein... 126 6e-028
gb|AY064973.1| Arabidopsis thaliana At1g30620/T5I8_7 mRNA, ... 126 6e-028
emb|AX506245.1| Sequence 940 from Patent WO0216655 126 6e-028
gb|AF083751.1| Arabidopsis thaliana clone sps542 unknown mRNA 126 6e-028
gb|BT002614.1| Arabidopsis thaliana At1g30620/T5I8_7 mRNA, ... 126 6e-028
gb|AY195742.1| Arabidopsis thaliana UDP-D-xylose 4-epimeras... 126 6e-028
emb|AX651855.1| Sequence 721 from Patent WO03000898 126 6e-028
gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5... 126 6e-028
emb|BX815256.1|CNS0AAN9 Arabidopsis thaliana Full-length cD... 126 6e-028
dbj|AK220800.1| Arabidopsis thaliana mRNA for UDP-galactose... 126 6e-028
ref|NM_102799.4| Arabidopsis thaliana MUR4 (MURUS 4); catal... 126 6e-028
ref|NM_001036041.1| Arabidopsis thaliana MUR4 (MURUS 4); ca... 126 6e-028
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 126 6e-028
emb|AX506164.1| Sequence 859 from Patent WO0216655 126 8e-028
dbj|AB017065.1| Arabidopsis thaliana genomic DNA, chromosom... 123 6e-027
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 123 6e-027
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 123 6e-027
gb|B12819.1|B12819 T12E9-T7 TAMU Arabidopsis thaliana genom... 122 8e-027
ref|NM_123815.1| Arabidopsis thaliana DUR (DEFECTIVE UGE IN... 122 8e-027
gb|AY070487.1| Arabidopsis thaliana At2g34850/F19I3.8 mRNA,... 122 1e-026
gb|AY091699.1| Arabidopsis thaliana At2g34850/F19I3.8 mRNA,... 122 1e-026
gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I... 122 1e-026
ref|NM_179907.1| Arabidopsis thaliana NAD binding / catalyt... 122 1e-026
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 122 1e-026
gb|CL488579.1|CL488579 SAIL_511_B08.v1 SAIL Collection Arab... 114 2e-024
>gb|AY133709.1| Arabidopsis thaliana clone C103301 putative UDP-glucose 4-epimerase
protein (At4g20460) mRNA, complete cds
Length = 1171
Score = 127 bits (273), Expect = 2e-028
Identities = 49/77 (63%), Positives = 63/77 (81%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV++L RRPGDYAEVYSDP+KI +LNW+A+YT+L +SL AWKWQK
Sbjct: 934 VEACKKATGVDIKVDFLPRRPGDYAEVYSDPAKILRDLNWSARYTNLQESLEVAWKWQKT 1113
Query: 189 HPNGYGPA*FRVQRLRE 239
HP+GY +* R ++ ++
Sbjct: 1114 HPHGYASS*RRPRKKKK 1164
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 127 bits (273), Expect = 2e-028
Identities = 49/77 (63%), Positives = 63/77 (81%)
Frame = +3 / -1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV++L RRPGDYAEVYSDP+KI +LNW+A+YT+L +SL AWKWQK
Sbjct: 6942733 VEACKKATGVDIKVDFLPRRPGDYAEVYSDPAKILRDLNWSARYTNLQESLEVAWKWQKT 6942554
Query: 189 HPNGYGPA*FRVQRLRE 239
HP+GY +* R ++ ++
Sbjct: 6942553 HPHGYASS*RRPRKKKK 6942503
>emb|AL080253.2|ATF9F13 Arabidopsis thaliana DNA chromosome 4, BAC clone F9F13 (ESSA project)
Length = 109936
Score = 127 bits (273), Expect = 2e-028
Identities = 49/77 (63%), Positives = 63/77 (81%)
Frame = +3 / -1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV++L RRPGDYAEVYSDP+KI +LNW+A+YT+L +SL AWKWQK
Sbjct: 48571 VEACKKATGVDIKVDFLPRRPGDYAEVYSDPAKILRDLNWSARYTNLQESLEVAWKWQKT 48392
Query: 189 HPNGYGPA*FRVQRLRE 239
HP+GY +* R ++ ++
Sbjct: 48391 HPHGYASS*RRPRKKKK 48341
>emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 53
Length = 197568
Score = 127 bits (273), Expect = 2e-028
Identities = 49/77 (63%), Positives = 63/77 (81%)
Frame = +3 / -2
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV++L RRPGDYAEVYSDP+KI +LNW+A+YT+L +SL AWKWQK
Sbjct: 34118 VEACKKATGVDIKVDFLPRRPGDYAEVYSDPAKILRDLNWSARYTNLQESLEVAWKWQKT 33939
Query: 189 HPNGYGPA*FRVQRLRE 239
HP+GY +* R ++ ++
Sbjct: 33938 HPHGYASS*RRPRKKKK 33888
>ref|NM_118165.2| Arabidopsis thaliana NAD binding / UDP-glucose 4-epimerase/ catalytic
AT4G20460 mRNA, complete cds
Length = 1171
Score = 127 bits (273), Expect = 2e-028
Identities = 49/77 (63%), Positives = 63/77 (81%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV++L RRPGDYAEVYSDP+KI +LNW+A+YT+L +SL AWKWQK
Sbjct: 934 VEACKKATGVDIKVDFLPRRPGDYAEVYSDPAKILRDLNWSARYTNLQESLEVAWKWQKT 1113
Query: 189 HPNGYGPA*FRVQRLRE 239
HP+GY +* R ++ ++
Sbjct: 1114 HPHGYASS*RRPRKKKK 1164
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 127 bits (273), Expect = 2e-028
Identities = 49/77 (63%), Positives = 63/77 (81%)
Frame = +3 / -3
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV++L RRPGDYAEVYSDP+KI +LNW+A+YT+L +SL AWKWQK
Sbjct: 11029984 VEACKKATGVDIKVDFLPRRPGDYAEVYSDPAKILRDLNWSARYTNLQESLEVAWKWQKT 11029805
Query: 189 HPNGYGPA*FRVQRLRE 239
HP+GY +* R ++ ++
Sbjct: 11029804 HPHGYASS*RRPRKKKK 11029754
>gb|AV544700.1|AV544700 AV544700 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ55b05F 3', mRNA sequence
Length = 465
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / -1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 459 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 280
Query: 189 HPNGYG 206
H NGYG
Sbjct: 279 HRNGYG 262
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 10866523 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 10866702
Query: 189 HPNGYG 206
H NGYG
Sbjct: 10866703 HRNGYG 10866720
>gb|AF325108.1|AF325108 Arabidopsis thaliana unknown protein (T5I8.7) mRNA, complete cds
Length = 1260
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 1033 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 1212
Query: 189 HPNGYG 206
H NGYG
Sbjct: 1213 HRNGYG 1230
>gb|AY064973.1| Arabidopsis thaliana At1g30620/T5I8_7 mRNA, complete cds
Length = 1863
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 1369 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 1548
Query: 189 HPNGYG 206
H NGYG
Sbjct: 1549 HRNGYG 1566
>emb|AX506245.1| Sequence 940 from Patent WO0216655
Length = 1239
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 1012 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 1191
Query: 189 HPNGYG 206
H NGYG
Sbjct: 1192 HRNGYG 1209
>gb|AF083751.1| Arabidopsis thaliana clone sps542 unknown mRNA
Length = 1924
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / +3
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 1383 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 1562
Query: 189 HPNGYG 206
H NGYG
Sbjct: 1563 HRNGYG 1580
>gb|BT002614.1| Arabidopsis thaliana At1g30620/T5I8_7 mRNA, complete cds
Length = 1260
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 1033 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 1212
Query: 189 HPNGYG 206
H NGYG
Sbjct: 1213 HRNGYG 1230
>gb|AY195742.1| Arabidopsis thaliana UDP-D-xylose 4-epimerase (MUR4) mRNA, complete
cds
Length = 1579
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / +3
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 1071 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 1250
Query: 189 HPNGYG 206
H NGYG
Sbjct: 1251 HRNGYG 1268
>emb|AX651855.1| Sequence 721 from Patent WO03000898
Length = 1239
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 1012 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 1191
Query: 189 HPNGYG 206
H NGYG
Sbjct: 1192 HRNGYG 1209
>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence
Length = 96183
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / +3
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 32994 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 33173
Query: 189 HPNGYG 206
H NGYG
Sbjct: 33174 HRNGYG 33191
>emb|BX815256.1|CNS0AAN9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS47ZB07 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1831
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 1330 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 1509
Query: 189 HPNGYG 206
H NGYG
Sbjct: 1510 HRNGYG 1527
>dbj|AK220800.1| Arabidopsis thaliana mRNA for UDP-galactose 4-epimerase-like
protein, complete cds, clone: RAFL22-29-J05
Length = 1015
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 511 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 690
Query: 189 HPNGYG 206
H NGYG
Sbjct: 691 HRNGYG 708
>ref|NM_102799.4| Arabidopsis thaliana MUR4 (MURUS 4); catalytic AT1G30620 (MUR4)
transcript variant AT1G30620.1 mRNA, complete cds
Length = 1884
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / +3
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 1383 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 1562
Query: 189 HPNGYG 206
H NGYG
Sbjct: 1563 HRNGYG 1580
>ref|NM_001036041.1| Arabidopsis thaliana MUR4 (MURUS 4); catalytic AT1G30620 (MUR4)
transcript variant AT1G30620.2 mRNA, complete cds
Length = 1900
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 1429 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 1608
Query: 189 HPNGYG 206
H NGYG
Sbjct: 1609 HRNGYG 1626
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 126 bits (270), Expect = 6e-028
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3 / +2
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 10857725 VEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 10857904
Query: 189 HPNGYG 206
H NGYG
Sbjct: 10857905 HRNGYG 10857922
>emb|AX506164.1| Sequence 859 from Patent WO0216655
Length = 1140
Score = 126 bits (269), Expect = 8e-028
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV++L RRPGDYAEVYSDP+KI +LNW+A+YT+L +SL AWKWQK
Sbjct: 934 VEACKKATGVDIKVDFLPRRPGDYAEVYSDPAKILRDLNWSARYTNLQESLEVAWKWQKT 1113
Query: 189 HPNGYGPA* 215
HP+GY +*
Sbjct: 1114 HPHGYASS* 1140
>dbj|AB017065.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC16
Length = 61290
Score = 123 bits (263), Expect = 6e-027
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = +3 / +3
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV++L RRPGDYAEVYSDP+KI +LNWTA++T+L SL AW+WQK
Sbjct: 36882 VEACKKATGVEIKVDFLPRRPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRWQKI 37061
Query: 189 HPNGYGPA*FRVQ 227
HP+GY * + Q
Sbjct: 37062 HPHGYNSY*TKKQ 37100
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 123 bits (263), Expect = 6e-027
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV++L RRPGDYAEVYSDP+KI +LNWTA++T+L SL AW+WQK
Sbjct: 16286158 VEACKKATGVEIKVDFLPRRPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRWQKI 16286337
Query: 189 HPNGYGPA*FRVQ 227
HP+GY * + Q
Sbjct: 16286338 HPHGYNSY*TKKQ 16286376
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 123 bits (263), Expect = 6e-027
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV++L RRPGDYAEVYSDP+KI +LNWTA++T+L SL AW+WQK
Sbjct: 17940664 VEACKKATGVEIKVDFLPRRPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRWQKI 17940843
Query: 189 HPNGYGPA*FRVQ 227
HP+GY * + Q
Sbjct: 17940844 HPHGYNSY*TKKQ 17940882
>gb|B12819.1|B12819 T12E9-T7 TAMU Arabidopsis thaliana genomic clone T12E9, DNA
sequence
Length = 1153
Score = 122 bits (262), Expect = 8e-027
Identities = 46/66 (69%), Positives = 54/66 (81%)
Frame = +3 / +2
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEAC K+TG IK++YL RR GDYAEVYSDPSKI ELNWTA++T+L +SL AW+WQK
Sbjct: 386 VEACNKSTGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKL 565
Query: 189 HPNGYG 206
H NGYG
Sbjct: 566 HRNGYG 583
>ref|NM_123815.1| Arabidopsis thaliana DUR (DEFECTIVE UGE IN ROOT); NAD binding /
UDP-glucose 4-epimerase/ catalytic AT5G44480 (DUR) mRNA,
complete cds
Length = 1311
Score = 122 bits (262), Expect = 8e-027
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV++L RRPGDYAEVYSDP+KI +LNWTA++T+L SL AW+WQK
Sbjct: 1105 VEACKKATGVEIKVDFLPRRPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRWQKI 1284
Query: 189 HPNGY 203
HP+GY
Sbjct: 1285 HPHGY 1299
>gb|AY070487.1| Arabidopsis thaliana At2g34850/F19I3.8 mRNA, complete cds
Length = 1125
Score = 122 bits (260), Expect = 1e-026
Identities = 47/66 (71%), Positives = 54/66 (81%)
Frame = +3 / +3
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV+YL RR GDYAEVYSDP KI ELNWTA++T+L +SL AW+WQK
Sbjct: 741 VEACKKATGVDIKVDYLERRAGDYAEVYSDPRKIKEELNWTAKHTNLQESLKMAWRWQKL 920
Query: 189 HPNGYG 206
H +GYG
Sbjct: 921 HRSGYG 938
>gb|AY091699.1| Arabidopsis thaliana At2g34850/F19I3.8 mRNA, complete cds
Length = 711
Score = 122 bits (260), Expect = 1e-026
Identities = 47/66 (71%), Positives = 54/66 (81%)
Frame = +3 / +1
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV+YL RR GDYAEVYSDP KI ELNWTA++T+L +SL AW+WQK
Sbjct: 487 VEACKKATGVDIKVDYLERRAGDYAEVYSDPRKIKEELNWTAKHTNLQESLKMAWRWQKL 666
Query: 189 HPNGYG 206
H +GYG
Sbjct: 667 HRSGYG 684
>gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map ve016, complete
sequence
Length = 108484
Score = 122 bits (260), Expect = 1e-026
Identities = 47/66 (71%), Positives = 54/66 (81%)
Frame = +3 / -2
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV+YL RR GDYAEVYSDP KI ELNWTA++T+L +SL AW+WQK
Sbjct: 33693 VEACKKATGVDIKVDYLERRAGDYAEVYSDPRKIKEELNWTAKHTNLQESLKMAWRWQKL 33514
Query: 189 HPNGYG 206
H +GYG
Sbjct: 33513 HRSGYG 33496
>ref|NM_179907.1| Arabidopsis thaliana NAD binding / catalytic AT2G34850 mRNA,
complete cds
Length = 1106
Score = 122 bits (260), Expect = 1e-026
Identities = 47/66 (71%), Positives = 54/66 (81%)
Frame = +3 / +2
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV+YL RR GDYAEVYSDP KI ELNWTA++T+L +SL AW+WQK
Sbjct: 722 VEACKKATGVDIKVDYLERRAGDYAEVYSDPRKIKEELNWTAKHTNLQESLKMAWRWQKL 901
Query: 189 HPNGYG 206
H +GYG
Sbjct: 902 HRSGYG 919
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 122 bits (260), Expect = 1e-026
Identities = 47/66 (71%), Positives = 54/66 (81%)
Frame = +3 / -2
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKATG IKV+YL RR GDYAEVYSDP KI ELNWTA++T+L +SL AW+WQK
Sbjct: 14712095 VEACKKATGVDIKVDYLERRAGDYAEVYSDPRKIKEELNWTAKHTNLQESLKMAWRWQKL 14711916
Query: 189 HPNGYG 206
H +GYG
Sbjct: 14711915 HRSGYG 14711898
>gb|CL488579.1|CL488579 SAIL_511_B08.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_511_B08.v1, DNA sequence
Length = 930
Score = 114 bits (244), Expect = 2e-024
Identities = 44/66 (66%), Positives = 52/66 (78%)
Frame = +3 / -2
Query: 9 VEACKKATGASIKVEYLARRPGDYAEVYSDPSKIHMELNWTAQYTDLGQSLAQAWKWQKA 188
VEACKKA G IK++YL RR GDYAEV+SDPSKI EL WTA++T+ +SL AW+WQK
Sbjct: 437 VEACKKAPGVEIKIDYLPRRAGDYAEVFSDPSKIRKELIWTAKHTNFKESL*TAWRWQKL 258
Query: 189 HPNGYG 206
H NGYG
Sbjct: 257 HRNGYG 240
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,309,241,553
Number of Sequences: 1013581
Number of extensions: 19616062
Number of successful extensions: 170638
Number of sequences better than 1.0e-020: 42
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 39310100265
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)