TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440773.2.1
(1437 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_121870.3| Arabidopsis thaliana protein binding / ubi... 326 e-124
gb|AY064060.1| Arabidopsis thaliana unknown protein (At5g18... 326 e-124
emb|BX829794.1|CNS0A03H Arabidopsis thaliana Full-length cD... 326 e-124
gb|AY096370.1| Arabidopsis thaliana unknown protein (At5g18... 326 e-124
emb|CQ803772.1| Sequence 183 from Patent WO2004035798 326 e-124
emb|BX830637.1|CNS0A048 Arabidopsis thaliana Full-length cD... 311 e-120
ref|NM_116162.4| Arabidopsis thaliana protein binding / ubi... 365 e-118
gb|BT006418.1| Arabidopsis thaliana At3g62970 gene, complet... 365 e-117
emb|BX825642.1|CNS0A514 Arabidopsis thaliana Full-length cD... 361 e-116
gb|CA781795.1|CA781795 050D05AF Infected Arabidopsis Leaf A... 326 e-112
emb|BX841616.1|CNS09YKN Arabidopsis thaliana Full-length cD... 325 e-106
ref|NM_122198.2| Arabidopsis thaliana ubiquitin-protein lig... 282 e-106
gb|AY052362.1| Arabidopsis thaliana AT5g22920/MRN17_15 mRNA... 282 e-106
gb|AY088138.1| Arabidopsis thaliana clone 41666 mRNA, compl... 282 e-106
gb|BT002635.1| Arabidopsis thaliana At5g22920/MRN17_15 gene... 282 e-106
gb|DQ059131.1| Arabidopsis thaliana RING finger family prot... 282 e-106
ref|NM_122467.2| Arabidopsis thaliana protein binding / ubi... 280 e-101
gb|AY070720.1| Arabidopsis thaliana AT5g25560/T14C9_100 mRN... 280 1e-098
emb|BX831389.1|CNS0A1NP Arabidopsis thaliana Full-length cD... 274 4e-094
gb|BP562733.1|BP562733 BP562733 RAFL14 Arabidopsis thaliana... 274 3e-090
gb|AC051627.4|AC051627 Genomic Sequence For Arabidopsis tha... 78 1e-066
gb|T43488.1|T43488 6751 Lambda-PRL2 Arabidopsis thaliana cD... 238 3e-061
gb|AV540574.1|AV540574 AV540574 Arabidopsis thaliana roots ... 171 8e-057
emb|AL163816.1|ATT20O10 Arabidopsis thaliana DNA chromosome... 69 9e-057
dbj|AB005243.1| Arabidopsis thaliana genomic DNA, chromosom... 71 9e-056
gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V ma... 62 2e-054
gb|BT011670.1| Arabidopsis thaliana At1g74760 mRNA, complet... 66 1e-049
gb|DQ086838.1| Arabidopsis thaliana At1g74760 mRNA, complet... 66 1e-049
ref|NM_106134.1| Arabidopsis thaliana protein binding / ubi... 66 1e-049
gb|AY094471.1| Arabidopsis thaliana AT3g18290/MIE15_8 mRNA,... 69 6e-049
ref|NM_112713.2| Arabidopsis thaliana EMB2454; protein bind... 69 6e-049
gb|BT005819.1| Arabidopsis thaliana At3g18290/MIE15_8 gene,... 69 6e-049
gb|Z37684.1|Z37684 ATTS4149 Versailles-VB Arabidopsis thali... 122 1e-048
gb|AV543982.1|AV543982 AV543982 Arabidopsis thaliana roots ... 132 5e-047
gb|CF651318.1|CF651318 30-E9213-013-001-K07-T7R MPIZ-ADIS-0... 164 1e-046
gb|BP823729.1|BP823729 BP823729 RAFL19 Arabidopsis thaliana... 128 1e-046
gb|CF774264.1|CF774264 AG_FSL_30B06 Arabidopsis ag-1 35S:AG... 182 3e-044
gb|CF651317.1|CF651317 30-E021110-013-001-K07-T7R MPIZ-ADIS... 131 4e-044
gb|AC068602.2|AC068602 Genomic sequence for Arabidopsis tha... 64 5e-042
gb|AV783078.1|AV783078 AV783078 RAFL5 Arabidopsis thaliana ... 131 4e-041
gb|AV826141.1|AV826141 AV826141 RAFL8 Arabidopsis thaliana ... 83 5e-041
gb|BP798029.1|BP798029 BP798029 RAFL14 Arabidopsis thaliana... 109 8e-041
gb|AV560651.1|AV560651 AV560651 Arabidopsis thaliana green ... 115 1e-039
ref|NM_101748.1| Arabidopsis thaliana protein binding / ubi... 66 2e-038
gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F... 64 3e-037
gb|AI998792.1|AI998792 701546931 A. thaliana, Columbia Col-... 90 2e-034
gb|BP824281.1|BP824281 BP824281 RAFL19 Arabidopsis thaliana... 84 3e-033
dbj|AP000414.1| Arabidopsis thaliana genomic DNA, chromosom... 69 5e-033
dbj|AK220658.1| Arabidopsis thaliana mRNA for PGPD14 protei... 94 8e-032
gb|BP833602.1|BP833602 BP833602 RAFL19 Arabidopsis thaliana... 77 5e-031
gb|CB259861.1|CB259861 18-E011177-013-009-C06-T7R MPIZ-ADIS... 78 4e-030
gb|C99815.1|C99815 C99815 YAC clone CIC8B11 region-specific... 88 5e-030
gb|BP821006.1|BP821006 BP821006 RAFL19 Arabidopsis thaliana... 85 7e-030
gb|BP813040.1|BP813040 BP813040 RAFL19 Arabidopsis thaliana... 92 1e-029
gb|BP816757.1|BP816757 BP816757 RAFL19 Arabidopsis thaliana... 86 1e-028
gb|AQ955438.1|AQ955438 LERAD96TF LERA Arabidopsis thaliana ... 65 3e-027
gb|AI996895.1|AI996895 701516501 A. thaliana, Columbia Col-... 79 3e-025
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 64 4e-024
gb|BP864319.1|BP864319 BP864319 RAFL21 Arabidopsis thaliana... 67 6e-024
gb|BP616432.1|BP616432 BP616432 RAFL16 Arabidopsis thaliana... 67 8e-023
gb|CF652132.1|CF652132 36-L020135w-066-001-G09-SP6P MPIZ-AD... 79 1e-022
gb|CF652131.1|CF652131 36-L020135-066-001-G09-SP6P MPIZ-ADI... 79 1e-022
gb|BP618227.1|BP618227 BP618227 RAFL16 Arabidopsis thaliana... 67 1e-022
gb|AV550477.1|AV550477 AV550477 Arabidopsis thaliana roots ... 81 3e-022
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 64 1e-021
gb|BP668651.1|BP668651 BP668651 RAFL21 Arabidopsis thaliana... 67 2e-021
gb|BP592325.1|BP592325 BP592325 RAFL15 Arabidopsis thaliana... 67 2e-021
>ref|NM_121870.3| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc
ion binding AT5G18650 mRNA, complete cds
Length = 1480
Score = 326 bits (706), Expect(3) = e-124
Identities = 114/172 (66%), Positives = 144/172 (83%)
Frame = +2 / +1
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + RQDV++V+C +C+T+QP +QVC +CGVNMGEYFC IC FYDDDT+K Q+HC DC
Sbjct: 508 DRHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDC 687
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICRVGG+ENFFHC KCGSCY+V LR+NH+CVENSMR +CPICYEYLFDSL+ T V+ CG
Sbjct: 688 GICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYEYLFDSLKDTNVMKCG 867
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYK 787
HTMH+ C+ EM+ +K+ CPICS++ +D++ W+ LD+EIEAT MP YR K
Sbjct: 868 HTMHVECYNEMIKRDKFCCPICSRSVIDMSKTWQRLDEEIEATAMPSDYRDK 1023
Score = 166 bits (356), Expect(3) = 1e-052
Identities = 85/151 (56%), Positives = 94/151 (62%)
Frame = -1 / -3
Query: 780 RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCN 601
R + G+ VASIS S++ S LE IGQ L IS H CIVCP F T V
Sbjct: 1016 R*SEGIAVASISSSSLCHVLDISITDLEQIGQQNLSRLIISL*HSTCIVCPHFITFVSFR 837
Query: 600 ESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLS 421
ES RYS*Q+GQ IEFST WL R T *QDPHF QWKKFS PPTL +PQS Q C S
Sbjct: 836 ESKRYS*QMGQ**RIEFSTQRWLLRRPTA*QDPHFLQWKKFSRPPTLQIPQSSQ*NCCFS 657
Query: 420 VSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
VSSS*N+ + QKYSP+LTPQ T GC V
Sbjct: 656 VSSS*NMQMLQKYSPMLTPQFEQT*AAGCSV 564
Score = 140 bits (301), Expect(2) = 7e-034
Identities = 67/166 (40%), Positives = 92/166 (55%)
Frame = -3 / -2
Query: 787 LVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSCS 608
LV + RH GFDL I+ P I RA WT+ V H VHCV + C
Sbjct: 1023 LVTVI*RHSSGFDLFIESLPCFRHINH*PRANWTTKLVTFDHLVVAFYVHCVPAFHHICV 844
Query: 607 L**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVLP 428
L* VK +L+T+ ++ H*+L+ MV+ + NRI TL +EE+ TN A +T+ AM L
Sbjct: 843 L*RVKKVLVTNGTVMTH*ILNAAMVVAQTNRITRSTLLAMEEILTPTNSANSTVIAMKLL 664
Query: 427 FVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILT 290
F IIII++A K+ SH+D+T +L RL C N+ FN+LT
Sbjct: 663 FFSIIIIEYADAAKIFSHVDTTIRTNLSCRLLCIANRTNHLFNVLT 526
Score = 105 bits (225), Expect(2) = 6e-023
Identities = 63/168 (37%), Positives = 91/168 (54%)
Frame = +1 / +3
Query: 265 FRR*AYNMSSGC*KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLH 444
+ R + + SS * S L L + AG +S+ +LW Q+GR+ L ++ IL***Y + V L
Sbjct: 501 YLRPSRSCSSRR*TSDLFCLRYRAAGSSSLFELWCQHGRIFLQHLHIL***Y*KTTVSLR 680
Query: 445 RLWHMQGWWQGKLLPLCEVWVLLFCYTP**PSVCGXXXXXXXXXXXXVSI*LITRNKSSE 624
LW++Q WW + LPL EVW+LL ++ PS+ V *L +K E
Sbjct: 681 *LWNLQSWWA*EFLPLQEVWILLCGWSAQQPSLR*EFNASSLSHLLRVPF*LSKGHKCDE 860
Query: 625 LWTHNALDMF*RNGGA*QIHLSNML*NSS*FDTSLGNVGSRDRSHDHA 768
+ HNA M R+ *Q+ LSN+L S *+ ++ RDRSH +A
Sbjct: 861 MRAHNARRMLQRDDQT*QVLLSNLLEVSD*YV*NMAETR*RDRSHCYA 1004
Score = 84.5 bits (178), Expect(3) = e-124
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +2 / +1
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
DR GKM GC+HY+RRC+I APCCN+VF CRHCHNE+T++
Sbjct: 367 DRLHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTST 492
Score = 79.4 bits (167), Expect(3) = e-124
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +2 / +1
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
K+W+LCNDCN +EV+FH+IG KC HCRSYNTR + P
Sbjct: 1024 KVWILCNDCNDTTEVHFHIIGQKCGHCRSYNTRAIAPP 1137
Score = 46.0 bits (94), Expect(3) = 1e-052
Identities = 20/30 (66%), Positives = 20/30 (66%)
Frame = -1 / -3
Query: 261 VASLWQWRQGNTWLQHGATILHLRR*CSHP 172
V SL QWRQ T LQHGA I HL *C HP
Sbjct: 485 VLSL*QWRQSKTSLQHGALIWHLLL*CLHP 396
Score = 37.3 bits (75), Expect(3) = 1e-052
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = -3 / -2
Query: 898 RARCCSGVVRSAVAALVANHVKVHL*DLVAIVAKHPNLV 782
R R S VV SA++ ++++V+VH +V IVAK+PNL+
Sbjct: 1137 RRRNRSCVV*SAMSTFLSDYVEVHFCCVVTIVAKYPNLL 1021
Score = 26.7 bits (52), Expect(2) = 7e-034
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1 / -3
Query: 897 GRDVVRVLYDLQWLHLWPI 841
G + RVLYDLQ H PI
Sbjct: 1136 GGAIARVLYDLQCPHFCPI 1080
Score = 24.9 bits (48), Expect(2) = 6e-023
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3 / +2
Query: 771 LCIATRFGCFATIATRSQR 827
+ + RFG FATI T Q+
Sbjct: 1010 ITVTRRFGYFATIVTTQQK 1066
>gb|AY064060.1| Arabidopsis thaliana unknown protein (At5g18650) mRNA, complete cds
Length = 1470
Score = 326 bits (706), Expect(3) = e-124
Identities = 114/172 (66%), Positives = 144/172 (83%)
Frame = +2 / +1
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + RQDV++V+C +C+T+QP +QVC +CGVNMGEYFC IC FYDDDT+K Q+HC DC
Sbjct: 499 DRHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDC 678
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICRVGG+ENFFHC KCGSCY+V LR+NH+CVENSMR +CPICYEYLFDSL+ T V+ CG
Sbjct: 679 GICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYEYLFDSLKDTNVMKCG 858
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYK 787
HTMH+ C+ EM+ +K+ CPICS++ +D++ W+ LD+EIEAT MP YR K
Sbjct: 859 HTMHVECYNEMIKRDKFCCPICSRSVIDMSKTWQRLDEEIEATAMPSDYRDK 1014
Score = 166 bits (356), Expect(3) = 1e-052
Identities = 85/151 (56%), Positives = 94/151 (62%)
Frame = -1 / -2
Query: 780 RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCN 601
R + G+ VASIS S++ S LE IGQ L IS H CIVCP F T V
Sbjct: 1007 R*SEGIAVASISSSSLCHVLDISITDLEQIGQQNLSRLIISL*HSTCIVCPHFITFVSFR 828
Query: 600 ESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLS 421
ES RYS*Q+GQ IEFST WL R T *QDPHF QWKKFS PPTL +PQS Q C S
Sbjct: 827 ESKRYS*QMGQ**RIEFSTQRWLLRRPTA*QDPHFLQWKKFSRPPTLQIPQSSQ*NCCFS 648
Query: 420 VSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
VSSS*N+ + QKYSP+LTPQ T GC V
Sbjct: 647 VSSS*NMQMLQKYSPMLTPQFEQT*AAGCSV 555
Score = 140 bits (301), Expect(2) = 7e-034
Identities = 67/166 (40%), Positives = 92/166 (55%)
Frame = -3 / -1
Query: 787 LVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSCS 608
LV + RH GFDL I+ P I RA WT+ V H VHCV + C
Sbjct: 1014 LVTVI*RHSSGFDLFIESLPCFRHINH*PRANWTTKLVTFDHLVVAFYVHCVPAFHHICV 835
Query: 607 L**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVLP 428
L* VK +L+T+ ++ H*+L+ MV+ + NRI TL +EE+ TN A +T+ AM L
Sbjct: 834 L*RVKKVLVTNGTVMTH*ILNAAMVVAQTNRITRSTLLAMEEILTPTNSANSTVIAMKLL 655
Query: 427 FVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILT 290
F IIII++A K+ SH+D+T +L RL C N+ FN+LT
Sbjct: 654 FFSIIIIEYADAAKIFSHVDTTIRTNLSCRLLCIANRTNHLFNVLT 517
Score = 105 bits (225), Expect(2) = 6e-023
Identities = 63/168 (37%), Positives = 91/168 (54%)
Frame = +1 / +3
Query: 265 FRR*AYNMSSGC*KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLH 444
+ R + + SS * S L L + AG +S+ +LW Q+GR+ L ++ IL***Y + V L
Sbjct: 492 YLRPSRSCSSRR*TSDLFCLRYRAAGSSSLFELWCQHGRIFLQHLHIL***Y*KTTVSLR 671
Query: 445 RLWHMQGWWQGKLLPLCEVWVLLFCYTP**PSVCGXXXXXXXXXXXXVSI*LITRNKSSE 624
LW++Q WW + LPL EVW+LL ++ PS+ V *L +K E
Sbjct: 672 *LWNLQSWWA*EFLPLQEVWILLCGWSAQQPSLR*EFNASSLSHLLRVPF*LSKGHKCDE 851
Query: 625 LWTHNALDMF*RNGGA*QIHLSNML*NSS*FDTSLGNVGSRDRSHDHA 768
+ HNA M R+ *Q+ LSN+L S *+ ++ RDRSH +A
Sbjct: 852 MRAHNARRMLQRDDQT*QVLLSNLLEVSD*YV*NMAETR*RDRSHCYA 995
Score = 84.5 bits (178), Expect(3) = e-124
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +2 / +1
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
DR GKM GC+HY+RRC+I APCCN+VF CRHCHNE+T++
Sbjct: 358 DRLHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTST 483
Score = 79.4 bits (167), Expect(3) = e-124
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +2 / +1
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
K+W+LCNDCN +EV+FH+IG KC HCRSYNTR + P
Sbjct: 1015 KVWILCNDCNDTTEVHFHIIGQKCGHCRSYNTRAIAPP 1128
Score = 46.0 bits (94), Expect(3) = 1e-052
Identities = 20/30 (66%), Positives = 20/30 (66%)
Frame = -1 / -2
Query: 261 VASLWQWRQGNTWLQHGATILHLRR*CSHP 172
V SL QWRQ T LQHGA I HL *C HP
Sbjct: 476 VLSL*QWRQSKTSLQHGALIWHLLL*CLHP 387
Score = 37.3 bits (75), Expect(3) = 1e-052
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = -3 / -1
Query: 898 RARCCSGVVRSAVAALVANHVKVHL*DLVAIVAKHPNLV 782
R R S VV SA++ ++++V+VH +V IVAK+PNL+
Sbjct: 1128 RRRNRSCVV*SAMSTFLSDYVEVHFCCVVTIVAKYPNLL 1012
Score = 26.7 bits (52), Expect(2) = 7e-034
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1 / -2
Query: 897 GRDVVRVLYDLQWLHLWPI 841
G + RVLYDLQ H PI
Sbjct: 1127 GGAIARVLYDLQCPHFCPI 1071
Score = 24.9 bits (48), Expect(2) = 6e-023
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3 / +2
Query: 771 LCIATRFGCFATIATRSQR 827
+ + RFG FATI T Q+
Sbjct: 1001 ITVTRRFGYFATIVTTQQK 1057
>emb|BX829794.1|CNS0A03H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB37ZF09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1413
Score = 326 bits (706), Expect(3) = e-124
Identities = 114/172 (66%), Positives = 144/172 (83%)
Frame = +2 / +2
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + RQDV++V+C +C+T+QP +QVC +CGVNMGEYFC IC FYDDDT+K Q+HC DC
Sbjct: 485 DRHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDC 664
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICRVGG+ENFFHC KCGSCY+V LR+NH+CVENSMR +CPICYEYLFDSL+ T V+ CG
Sbjct: 665 GICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYEYLFDSLKDTNVMKCG 844
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYK 787
HTMH+ C+ EM+ +K+ CPICS++ +D++ W+ LD+EIEAT MP YR K
Sbjct: 845 HTMHVECYNEMIKRDKFCCPICSRSVIDMSKTWQRLDEEIEATAMPSDYRDK 1000
Score = 166 bits (356), Expect(3) = 1e-052
Identities = 85/151 (56%), Positives = 94/151 (62%)
Frame = -1 / -1
Query: 780 RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCN 601
R + G+ VASIS S++ S LE IGQ L IS H CIVCP F T V
Sbjct: 993 R*SEGIAVASISSSSLCHVLDISITDLEQIGQQNLSRLIISL*HSTCIVCPHFITFVSFR 814
Query: 600 ESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLS 421
ES RYS*Q+GQ IEFST WL R T *QDPHF QWKKFS PPTL +PQS Q C S
Sbjct: 813 ESKRYS*QMGQ**RIEFSTQRWLLRRPTA*QDPHFLQWKKFSRPPTLQIPQSSQ*NCCFS 634
Query: 420 VSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
VSSS*N+ + QKYSP+LTPQ T GC V
Sbjct: 633 VSSS*NMQMLQKYSPMLTPQFEQT*AAGCSV 541
Score = 135 bits (289), Expect(2) = 3e-032
Identities = 66/166 (39%), Positives = 90/166 (54%)
Frame = -3 / -3
Query: 787 LVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSCS 608
LV + RH FDL I+ P I RA WT+ V H VHCV + C
Sbjct: 1000 LVTVI*RHSSRFDLFIESLPCFRHINH*PRANWTTKLVTFDHLVVAFYVHCVPAFHHICV 821
Query: 607 L**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVLP 428
L* VK +L+T+ ++ H*+L+ MV+ + NRI TL +EE+ TN A +T+ AM L
Sbjct: 820 L*RVKKVLVTNGTVMTH*ILNAAMVVAQTNRITRSTLLAMEEILTPTNSANSTVIAMKLL 641
Query: 427 FVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILT 290
F IIII++A K+ SH+D+T +L RL C N FN+LT
Sbjct: 640 FFSIIIIEYADAAKIFSHVDTTIRTNLSCRLLCIANRTNNLFNVLT 503
Score = 100 bits (214), Expect(2) = 2e-021
Identities = 62/168 (36%), Positives = 90/168 (53%)
Frame = +1 / +1
Query: 265 FRR*AYNMSSGC*KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLH 444
+ R + + SS * S L L + AG +S+ +LW Q+GR+ L ++ IL***Y + V L
Sbjct: 478 YLRPSRSCSSRR*TSYLFCLRYRAAGSSSLFELWCQHGRIFLQHLHIL***Y*KTTVSLR 657
Query: 445 RLWHMQGWWQGKLLPLCEVWVLLFCYTP**PSVCGXXXXXXXXXXXXVSI*LITRNKSSE 624
LW++Q WW + LPL EVW+LL ++ PS+ V *L +K E
Sbjct: 658 *LWNLQSWWA*EFLPLQEVWILLCGWSAQQPSLR*EFNASSLSHLLRVPF*LSKGHKCDE 837
Query: 625 LWTHNALDMF*RNGGA*QIHLSNML*NSS*FDTSLGNVGSRDRSHDHA 768
+ HNA M R+ *Q+ LSN+L S *+ ++ RDRS +A
Sbjct: 838 MRAHNARRMLQRDDQT*QVLLSNLLEVSD*YV*NMAETR*RDRSDCYA 981
Score = 84.5 bits (178), Expect(3) = e-124
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +2 / +2
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
DR GKM GC+HY+RRC+I APCCN+VF CRHCHNE+T++
Sbjct: 344 DRLHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTST 469
Score = 79.4 bits (167), Expect(3) = e-124
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +2 / +2
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
K+W+LCNDCN +EV+FH+IG KC HCRSYNTR + P
Sbjct: 1001 KVWILCNDCNDTTEVHFHIIGQKCGHCRSYNTRAIAPP 1114
Score = 46.0 bits (94), Expect(3) = 1e-052
Identities = 20/30 (66%), Positives = 20/30 (66%)
Frame = -1 / -1
Query: 261 VASLWQWRQGNTWLQHGATILHLRR*CSHP 172
V SL QWRQ T LQHGA I HL *C HP
Sbjct: 462 VLSL*QWRQSKTSLQHGALIWHLLL*CLHP 373
Score = 37.3 bits (75), Expect(3) = 1e-052
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = -3 / -3
Query: 898 RARCCSGVVRSAVAALVANHVKVHL*DLVAIVAKHPNLV 782
R R S VV SA++ ++++V+VH +V IVAK+PNL+
Sbjct: 1114 RRRNRSCVV*SAMSTFLSDYVEVHFCCVVTIVAKYPNLL 998
Score = 26.7 bits (52), Expect(2) = 3e-032
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1 / -1
Query: 897 GRDVVRVLYDLQWLHLWPI 841
G + RVLYDLQ H PI
Sbjct: 1113 GGAIARVLYDLQCPHFCPI 1057
Score = 24.9 bits (48), Expect(2) = 2e-021
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3 / +3
Query: 771 LCIATRFGCFATIATRSQR 827
+ + RFG FATI T Q+
Sbjct: 987 ITVTRRFGYFATIVTTQQK 1043
>gb|AY096370.1| Arabidopsis thaliana unknown protein (At5g18650) mRNA, complete cds
Length = 835
Score = 326 bits (706), Expect(3) = e-124
Identities = 114/172 (66%), Positives = 144/172 (83%)
Frame = +2 / +1
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + RQDV++V+C +C+T+QP +QVC +CGVNMGEYFC IC FYDDDT+K Q+HC DC
Sbjct: 160 DRHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDC 339
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICRVGG+ENFFHC KCGSCY+V LR+NH+CVENSMR +CPICYEYLFDSL+ T V+ CG
Sbjct: 340 GICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYEYLFDSLKDTNVMKCG 519
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYK 787
HTMH+ C+ EM+ +K+ CPICS++ +D++ W+ LD+EIEAT MP YR K
Sbjct: 520 HTMHVECYNEMIKRDKFCCPICSRSVIDMSKTWQRLDEEIEATAMPSDYRDK 675
Score = 166 bits (356), Expect(3) = 1e-052
Identities = 85/151 (56%), Positives = 94/151 (62%)
Frame = -1 / -3
Query: 780 RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCN 601
R + G+ VASIS S++ S LE IGQ L IS H CIVCP F T V
Sbjct: 668 R*SEGIAVASISSSSLCHVLDISITDLEQIGQQNLSRLIISL*HSTCIVCPHFITFVSFR 489
Query: 600 ESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLS 421
ES RYS*Q+GQ IEFST WL R T *QDPHF QWKKFS PPTL +PQS Q C S
Sbjct: 488 ESKRYS*QMGQ**RIEFSTQRWLLRRPTA*QDPHFLQWKKFSRPPTLQIPQSSQ*NCCFS 309
Query: 420 VSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
VSSS*N+ + QKYSP+LTPQ T GC V
Sbjct: 308 VSSS*NMQMLQKYSPMLTPQFEQT*AAGCSV 216
Score = 140 bits (301), Expect(2) = 7e-034
Identities = 67/166 (40%), Positives = 92/166 (55%)
Frame = -3 / -2
Query: 787 LVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSCS 608
LV + RH GFDL I+ P I RA WT+ V H VHCV + C
Sbjct: 675 LVTVI*RHSSGFDLFIESLPCFRHINH*PRANWTTKLVTFDHLVVAFYVHCVPAFHHICV 496
Query: 607 L**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVLP 428
L* VK +L+T+ ++ H*+L+ MV+ + NRI TL +EE+ TN A +T+ AM L
Sbjct: 495 L*RVKKVLVTNGTVMTH*ILNAAMVVAQTNRITRSTLLAMEEILTPTNSANSTVIAMKLL 316
Query: 427 FVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILT 290
F IIII++A K+ SH+D+T +L RL C N+ FN+LT
Sbjct: 315 FFSIIIIEYADAAKIFSHVDTTIRTNLSCRLLCIANRTNHLFNVLT 178
Score = 105 bits (225), Expect(2) = 6e-023
Identities = 63/168 (37%), Positives = 91/168 (54%)
Frame = +1 / +3
Query: 265 FRR*AYNMSSGC*KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLH 444
+ R + + SS * S L L + AG +S+ +LW Q+GR+ L ++ IL***Y + V L
Sbjct: 153 YLRPSRSCSSRR*TSDLFCLRYRAAGSSSLFELWCQHGRIFLQHLHIL***Y*KTTVSLR 332
Query: 445 RLWHMQGWWQGKLLPLCEVWVLLFCYTP**PSVCGXXXXXXXXXXXXVSI*LITRNKSSE 624
LW++Q WW + LPL EVW+LL ++ PS+ V *L +K E
Sbjct: 333 *LWNLQSWWA*EFLPLQEVWILLCGWSAQQPSLR*EFNASSLSHLLRVPF*LSKGHKCDE 512
Query: 625 LWTHNALDMF*RNGGA*QIHLSNML*NSS*FDTSLGNVGSRDRSHDHA 768
+ HNA M R+ *Q+ LSN+L S *+ ++ RDRSH +A
Sbjct: 513 MRAHNARRMLQRDDQT*QVLLSNLLEVSD*YV*NMAETR*RDRSHCYA 656
Score = 84.5 bits (178), Expect(3) = e-124
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +2 / +1
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
DR GKM GC+HY+RRC+I APCCN+VF CRHCHNE+T++
Sbjct: 19 DRLHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTST 144
Score = 79.4 bits (167), Expect(3) = e-124
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +2 / +1
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
K+W+LCNDCN +EV+FH+IG KC HCRSYNTR + P
Sbjct: 676 KVWILCNDCNDTTEVHFHIIGQKCGHCRSYNTRAIAPP 789
Score = 46.0 bits (94), Expect(3) = 1e-052
Identities = 20/30 (66%), Positives = 20/30 (66%)
Frame = -1 / -3
Query: 261 VASLWQWRQGNTWLQHGATILHLRR*CSHP 172
V SL QWRQ T LQHGA I HL *C HP
Sbjct: 137 VLSL*QWRQSKTSLQHGALIWHLLL*CLHP 48
Score = 37.3 bits (75), Expect(3) = 1e-052
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = -3 / -2
Query: 898 RARCCSGVVRSAVAALVANHVKVHL*DLVAIVAKHPNLV 782
R R S VV SA++ ++++V+VH +V IVAK+PNL+
Sbjct: 789 RRRNRSCVV*SAMSTFLSDYVEVHFCCVVTIVAKYPNLL 673
Score = 26.7 bits (52), Expect(2) = 7e-034
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1 / -3
Query: 897 GRDVVRVLYDLQWLHLWPI 841
G + RVLYDLQ H PI
Sbjct: 788 GGAIARVLYDLQCPHFCPI 732
Score = 24.9 bits (48), Expect(2) = 6e-023
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3 / +2
Query: 771 LCIATRFGCFATIATRSQR 827
+ + RFG FATI T Q+
Sbjct: 662 ITVTRRFGYFATIVTTQQK 718
>emb|CQ803772.1| Sequence 183 from Patent WO2004035798
Length = 804
Score = 326 bits (706), Expect(3) = e-124
Identities = 114/172 (66%), Positives = 144/172 (83%)
Frame = +2 / +1
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + RQDV++V+C +C+T+QP +QVC +CGVNMGEYFC IC FYDDDT+K Q+HC DC
Sbjct: 160 DRHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDC 339
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICRVGG+ENFFHC KCGSCY+V LR+NH+CVENSMR +CPICYEYLFDSL+ T V+ CG
Sbjct: 340 GICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYEYLFDSLKDTNVMKCG 519
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYK 787
HTMH+ C+ EM+ +K+ CPICS++ +D++ W+ LD+EIEAT MP YR K
Sbjct: 520 HTMHVECYNEMIKRDKFCCPICSRSVIDMSKTWQRLDEEIEATAMPSDYRDK 675
Score = 166 bits (356), Expect(3) = 1e-052
Identities = 85/151 (56%), Positives = 94/151 (62%)
Frame = -1 / -2
Query: 780 RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCN 601
R + G+ VASIS S++ S LE IGQ L IS H CIVCP F T V
Sbjct: 668 R*SEGIAVASISSSSLCHVLDISITDLEQIGQQNLSRLIISL*HSTCIVCPHFITFVSFR 489
Query: 600 ESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLS 421
ES RYS*Q+GQ IEFST WL R T *QDPHF QWKKFS PPTL +PQS Q C S
Sbjct: 488 ESKRYS*QMGQ**RIEFSTQRWLLRRPTA*QDPHFLQWKKFSRPPTLQIPQSSQ*NCCFS 309
Query: 420 VSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
VSSS*N+ + QKYSP+LTPQ T GC V
Sbjct: 308 VSSS*NMQMLQKYSPMLTPQFEQT*AAGCSV 216
Score = 140 bits (301), Expect(2) = 7e-034
Identities = 67/166 (40%), Positives = 92/166 (55%)
Frame = -3 / -1
Query: 787 LVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSCS 608
LV + RH GFDL I+ P I RA WT+ V H VHCV + C
Sbjct: 675 LVTVI*RHSSGFDLFIESLPCFRHINH*PRANWTTKLVTFDHLVVAFYVHCVPAFHHICV 496
Query: 607 L**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVLP 428
L* VK +L+T+ ++ H*+L+ MV+ + NRI TL +EE+ TN A +T+ AM L
Sbjct: 495 L*RVKKVLVTNGTVMTH*ILNAAMVVAQTNRITRSTLLAMEEILTPTNSANSTVIAMKLL 316
Query: 427 FVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILT 290
F IIII++A K+ SH+D+T +L RL C N+ FN+LT
Sbjct: 315 FFSIIIIEYADAAKIFSHVDTTIRTNLSCRLLCIANRTNHLFNVLT 178
Score = 105 bits (225), Expect(2) = 6e-023
Identities = 63/168 (37%), Positives = 91/168 (54%)
Frame = +1 / +3
Query: 265 FRR*AYNMSSGC*KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLH 444
+ R + + SS * S L L + AG +S+ +LW Q+GR+ L ++ IL***Y + V L
Sbjct: 153 YLRPSRSCSSRR*TSDLFCLRYRAAGSSSLFELWCQHGRIFLQHLHIL***Y*KTTVSLR 332
Query: 445 RLWHMQGWWQGKLLPLCEVWVLLFCYTP**PSVCGXXXXXXXXXXXXVSI*LITRNKSSE 624
LW++Q WW + LPL EVW+LL ++ PS+ V *L +K E
Sbjct: 333 *LWNLQSWWA*EFLPLQEVWILLCGWSAQQPSLR*EFNASSLSHLLRVPF*LSKGHKCDE 512
Query: 625 LWTHNALDMF*RNGGA*QIHLSNML*NSS*FDTSLGNVGSRDRSHDHA 768
+ HNA M R+ *Q+ LSN+L S *+ ++ RDRSH +A
Sbjct: 513 MRAHNARRMLQRDDQT*QVLLSNLLEVSD*YV*NMAETR*RDRSHCYA 656
Score = 84.5 bits (178), Expect(3) = e-124
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +2 / +1
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
DR GKM GC+HY+RRC+I APCCN+VF CRHCHNE+T++
Sbjct: 19 DRLHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTST 144
Score = 79.4 bits (167), Expect(3) = e-124
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +2 / +1
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
K+W+LCNDCN +EV+FH+IG KC HCRSYNTR + P
Sbjct: 676 KVWILCNDCNDTTEVHFHIIGQKCGHCRSYNTRAIAPP 789
Score = 46.0 bits (94), Expect(3) = 1e-052
Identities = 20/30 (66%), Positives = 20/30 (66%)
Frame = -1 / -2
Query: 261 VASLWQWRQGNTWLQHGATILHLRR*CSHP 172
V SL QWRQ T LQHGA I HL *C HP
Sbjct: 137 VLSL*QWRQSKTSLQHGALIWHLLL*CLHP 48
Score = 37.3 bits (75), Expect(3) = 1e-052
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = -3 / -1
Query: 898 RARCCSGVVRSAVAALVANHVKVHL*DLVAIVAKHPNLV 782
R R S VV SA++ ++++V+VH +V IVAK+PNL+
Sbjct: 789 RRRNRSCVV*SAMSTFLSDYVEVHFCCVVTIVAKYPNLL 673
Score = 26.7 bits (52), Expect(2) = 7e-034
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1 / -2
Query: 897 GRDVVRVLYDLQWLHLWPI 841
G + RVLYDLQ H PI
Sbjct: 788 GGAIARVLYDLQCPHFCPI 732
Score = 24.9 bits (48), Expect(2) = 6e-023
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3 / +2
Query: 771 LCIATRFGCFATIATRSQR 827
+ + RFG FATI T Q+
Sbjct: 662 ITVTRRFGYFATIVTTQQK 718
>emb|BX830637.1|CNS0A048 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB95ZF05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1393
Score = 311 bits (673), Expect(3) = e-120
Identities = 110/172 (63%), Positives = 139/172 (80%)
Frame = +2 / +1
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DR + RQDV++V+C +C+T+QP +QVC +CGVNMGEYFC IC FYDDDT+ Q HC DC
Sbjct: 487 DRDDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTETQQLHCDDC 666
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICRVGG+EN FHC KCGSCY+V LR+NH+CVENSMR +CPICYEYLF SL+ T V+ CG
Sbjct: 667 GICRVGGRENLFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYEYLFHSLKHTNVMKCG 846
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYK 787
HTMH+ C+ EM+ +K+ CPICS++ +D++ W+ LD+EIEAT MP YR K
Sbjct: 847 HTMHVECYNEMIKRDKFCCPICSRSVIDMSKTWQRLDEEIEATAMPSDYRDK 1002
Score = 160 bits (344), Expect(3) = 6e-052
Identities = 83/151 (54%), Positives = 94/151 (62%)
Frame = -1 / -3
Query: 780 RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCN 601
R + G+ VASIS S++ S LE IGQ L IS H CIVCP F T V
Sbjct: 995 R*SEGIAVASISSSSLCHVLDISITDLEQIGQQNLSRLIISL*HSTCIVCPHFITFVCFR 816
Query: 600 ESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLS 421
E RYS*Q+GQ IEFST WL R T *QDPHF QWK+FS PPTL +PQS Q C +S
Sbjct: 815 E*KRYS*QMGQ**RIEFSTQRWLLRRPTA*QDPHFLQWKRFSRPPTLQIPQSSQ*SCCVS 636
Query: 420 VSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
VSSS*N+ + QKYSP+LTPQ T GC V
Sbjct: 635 VSSS*NMQMLQKYSPMLTPQFEQT*AAGCSV 543
Score = 137 bits (293), Expect(2) = 9e-033
Identities = 66/166 (39%), Positives = 91/166 (54%)
Frame = -3 / -2
Query: 787 LVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSCS 608
LV + RH GFDL I+ P I RA WT+ V H VHCV + C
Sbjct: 1002 LVTVI*RHSSGFDLFIESLPCFRHINH*PRANWTTKLVTFDHLVVAFYVHCVPAFHHICV 823
Query: 607 L**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVLP 428
L* VK +L+T+ ++ H*+L+ MV+ + NRI TL +EE+ TN A +T+ AM L
Sbjct: 822 L*RVKKVLVTNGTVMTH*ILNAAMVVAQTNRITRSTLLAMEEILTPTNSANSTVIAMKLL 643
Query: 427 FVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILT 290
IIII++A K+ SH+D+T +L RL C N+ FN+LT
Sbjct: 642 CFSIIIIEYADAAKIFSHVDTTIRTNLSCRLLCIANRTNHLFNVLT 505
Score = 86.3 bits (182), Expect(3) = e-120
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +2 / +1
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
DR GKM GCEHY+RRC+I APCCN+VF CRHCHNE+T++
Sbjct: 346 DRLHFGKMGFGCEHYKRRCQIRAPCCNEVFDCRHCHNESTST 471
Score = 79.4 bits (167), Expect(3) = e-120
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +2 / +1
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
K+W+LCNDCN +EV+FH+IG KC HCRSYNTR + P
Sbjct: 1003 KVWILCNDCNDTTEVHFHIIGQKCGHCRSYNTRAIAPP 1116
Score = 48.7 bits (100), Expect(3) = 6e-052
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -1 / -3
Query: 261 VASLWQWRQGNTWLQHGATILHLRR*CSHP 172
V SL QWRQ T LQHGA I HL *CSHP
Sbjct: 464 VLSL*QWRQSKTSLQHGALIWHLLL*CSHP 375
Score = 37.3 bits (75), Expect(3) = 6e-052
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = -3 / -2
Query: 898 RARCCSGVVRSAVAALVANHVKVHL*DLVAIVAKHPNLV 782
R R S VV SA++ ++++V+VH +V IVAK+PNL+
Sbjct: 1116 RRRNRSCVV*SAMSTFLSDYVEVHFCCVVTIVAKYPNLL 1000
Score = 26.7 bits (52), Expect(2) = 9e-033
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1 / -3
Query: 897 GRDVVRVLYDLQWLHLWPI 841
G + RVLYDLQ H PI
Sbjct: 1115 GGAIARVLYDLQCPHFCPI 1059
>ref|NM_116162.4| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
zinc ion binding AT3G62970 mRNA, complete cds
Length = 1088
Score = 365 bits (792), Expect(2) = e-118
Identities = 123/209 (58%), Positives = 166/209 (79%)
Frame = +2 / +3
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
+RH + RQ+V++VVC +C+T+Q V++VC +CGVNMGEYFCDICKF+DDD K Q+HC DC
Sbjct: 213 ERHDLVRQNVKQVVCSICQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHCDDC 392
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICRVGG++ FFHC CG+CY + LRD H C+ENS + +CP+CYEYLFDS++ V+ CG
Sbjct: 393 GICRVGGRDKFFHCQNCGACYGMGLRDKHSCIENSTKNSCPVCYEYLFDSVKAAHVMKCG 572
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKIWVLCNDC 811
HTMH+ CFE+M+ N+Y CPIC+K+ +D++ W +LD EI AT MP+ Y++++ +LCNDC
Sbjct: 573 HTMHMDCFEQMINENQYRCPICAKSMVDMSPSWHLLDFEISATEMPVEYKFEVSILCNDC 752
Query: 812 NKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
NK S+ FH++GHKCS C SYNTR S P
Sbjct: 753 NKGSKAMFHILGHKCSDCGSYNTRRISTP 839
Score = 130 bits (279), Expect(3) = 2e-040
Identities = 67/125 (53%), Positives = 70/125 (56%)
Frame = -1 / -2
Query: 702 LEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS*QIGQFCLIEFSTH*WLSRS 523
L IG Y I SK CIV P F T ESNRYS*Q GQ +EFS H LSR
Sbjct: 643 LAQIGHRYWFSLIICSKQSICIV*PHFITCAAFTESNRYS*QTGQEFFVEFSMHECLSRK 464
Query: 522 ITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLMHTCD 343
*Q P F Q K S PPTL +PQS Q C +SSS NL ISQKYSPILTPQ T
Sbjct: 463 PIP*QAPQFWQ*KNLSRPPTLQIPQSSQ*NCSFEISSSKNLQISQKYSPILTPQFEQTLA 284
Query: 342 TGCFV 328
T C V
Sbjct: 283 TSCSV 269
Score = 83.5 bits (176), Expect(2) = e-118
Identities = 31/65 (47%), Positives = 40/65 (61%)
Frame = +2 / +3
Query: 74 MGGAQFPGDNDVAEVDAARDGEVDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHN 253
MGG+ + + AA +D GK + GCEHY+RRCKI APCCN +F CRHCHN
Sbjct: 3 MGGSASLQSDSMEAAAAADSSIPRDKDFGKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHN 182
Query: 254 EATAS 268
++ S
Sbjct: 183 DSANS 197
Score = 45.5 bits (93), Expect(3) = 2e-040
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -1 / -2
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E SLWQWR LQ GA ILH *CSHP
Sbjct: 196 EFAESLWQWRHEKMRLQQGALILHRLL*CSHP 101
Score = 31.3 bits (62), Expect(3) = 2e-040
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -3 / -1
Query: 877 VVRSAVAALVANHVKVHL*DLVAIVAKHPNLVAIHKRH 764
VV +A+ ALV+ +V+ LVA++A++ NL + RH
Sbjct: 818 VV*TAITALVSQNVEHSFTPLVAVIAEN*NLKLVLNRH 705
>gb|BT006418.1| Arabidopsis thaliana At3g62970 gene, complete cds
Length = 831
Score = 365 bits (792), Expect(2) = e-117
Identities = 123/209 (58%), Positives = 166/209 (79%)
Frame = +2 / +1
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
+RH + RQ+V++VVC +C+T+Q V++VC +CGVNMGEYFCDICKF+DDD K Q+HC DC
Sbjct: 178 ERHDLVRQNVKQVVCSICQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHCDDC 357
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICRVGG++ FFHC CG+CY + LRD H C+ENS + +CP+CYEYLFDS++ V+ CG
Sbjct: 358 GICRVGGRDKFFHCQNCGACYGMGLRDKHSCIENSTKNSCPVCYEYLFDSVKAAHVMKCG 537
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKIWVLCNDC 811
HTMH+ CFE+M+ N+Y CPIC+K+ +D++ W +LD EI AT MP+ Y++++ +LCNDC
Sbjct: 538 HTMHMDCFEQMINENQYRCPICAKSMVDMSPSWHLLDFEISATEMPVEYKFEVSILCNDC 717
Query: 812 NKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
NK S+ FH++GHKCS C SYNTR S P
Sbjct: 718 NKGSKAMFHILGHKCSDCGSYNTRRISTP 804
Score = 130 bits (279), Expect(3) = 2e-040
Identities = 67/125 (53%), Positives = 70/125 (56%)
Frame = -1 / -2
Query: 702 LEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS*QIGQFCLIEFSTH*WLSRS 523
L IG Y I SK CIV P F T ESNRYS*Q GQ +EFS H LSR
Sbjct: 608 LAQIGHRYWFSLIICSKQSICIV*PHFITCAAFTESNRYS*QTGQEFFVEFSMHECLSRK 429
Query: 522 ITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLMHTCD 343
*Q P F Q K S PPTL +PQS Q C +SSS NL ISQKYSPILTPQ T
Sbjct: 428 PIP*QAPQFWQ*KNLSRPPTLQIPQSSQ*NCSFEISSSKNLQISQKYSPILTPQFEQTLA 249
Query: 342 TGCFV 328
T C V
Sbjct: 248 TSCSV 234
Score = 95.9 bits (203), Expect(3) = 9e-021
Identities = 50/138 (36%), Positives = 73/138 (52%)
Frame = -3 / -1
Query: 691 WTSVFVMRHHFFKTCQVHCVSTVQNSCSL**VK*ILITDWAILPH*VLHTLMVITEYNRI 512
W SV V H FK +HC++T + C L +K*ILITD + VL+ + I + + +
Sbjct: 597 WASVLVFIDHLFKAIHMHCMTTFHHMCGLYRIK*ILITDRTRIFCRVLNARVFIAQAHSV 418
Query: 511 AGPTLHTVEEVFLATNPAYATIDAMVLPFVCIIIIKFAYITKVLSHIDSTAYAHL*HRLF 332
A T+ ++E TN +T+ M L F I++ +FA I KV SHID+T A + L
Sbjct: 417 ASSTVLAMKEFVTPTNSTNSTVITMKLFFRNIVVKEFADIAKVFSHIDATIRADFSNLLL 238
Query: 331 CFTE*ANYFFNILTTYCM 278
T * N F++L M
Sbjct: 237 SLTN*TNNLFDVLADQIM 184
Score = 81.3 bits (171), Expect(2) = e-117
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +2 / +1
Query: 149 RDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
+D GK + GCEHY+RRCKI APCCN +F CRHCHN++ S
Sbjct: 43 KDFGKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHNDSANS 162
Score = 45.5 bits (93), Expect(3) = 2e-040
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -1 / -2
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E SLWQWR LQ GA ILH *CSHP
Sbjct: 161 EFAESLWQWRHEKMRLQQGALILHRLL*CSHP 66
Score = 31.3 bits (62), Expect(3) = 2e-040
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -3 / -1
Query: 877 VVRSAVAALVANHVKVHL*DLVAIVAKHPNLVAIHKRH 764
VV +A+ ALV+ +V+ LVA++A++ NL + RH
Sbjct: 783 VV*TAITALVSQNVEHSFTPLVAVIAEN*NLKLVLNRH 670
Score = 28.1 bits (55), Expect(3) = 9e-021
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1 / -2
Query: 903 SAGRDVVRVLYDLQWLHLWP 844
S G +++RVLY+ Q LHL P
Sbjct: 809 SCGVEILRVLYEPQSLHLCP 750
Score = 22.6 bits (43), Expect(3) = 9e-021
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3 / -1
Query: 262 RSLVVAVAAGEHLVAARCHD 203
R +VVA+AA E +AAR D
Sbjct: 156 RRVVVAMAA*EDEIAARSSD 97
>emb|BX825642.1|CNS0A514 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL52ZF09 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 947
Score = 361 bits (782), Expect(2) = e-116
Identities = 121/209 (57%), Positives = 165/209 (78%)
Frame = +2 / +2
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
+RH + RQ+V++VVC +C+T+Q V++VC +CGVNMGEYFCDICKF+DDD K Q+HC DC
Sbjct: 182 ERHDLVRQNVKQVVCSICQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHCDDC 361
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICRVGG++ FFHC CG+CY + LRD H C+ENS + +CP+CYEYLFDS++ V+ CG
Sbjct: 362 GICRVGGRDKFFHCQNCGACYGMGLRDKHSCIENSTKNSCPVCYEYLFDSVKAAHVMKCG 541
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKIWVLCNDC 811
HTMH+ CFE+M+ N+Y CPIC+K+ +D++ W +LD EI+ MP+ Y++++ +LCNDC
Sbjct: 542 HTMHMDCFEQMINENQYRCPICAKSMVDMSPSWHLLDFEIKKKKMPVEYKFEVSILCNDC 721
Query: 812 NKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
NK S+ FH++GHKCS C SYNTR S P
Sbjct: 722 NKGSKAMFHILGHKCSDCGSYNTRRISTP 808
Score = 130 bits (279), Expect(3) = 1e-037
Identities = 67/125 (53%), Positives = 70/125 (56%)
Frame = -1 / -3
Query: 702 LEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS*QIGQFCLIEFSTH*WLSRS 523
L IG Y I SK CIV P F T ESNRYS*Q GQ +EFS H LSR
Sbjct: 612 LAQIGHRYWFSLIICSKQSICIV*PHFITCAAFTESNRYS*QTGQEFFVEFSMHECLSRK 433
Query: 522 ITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLMHTCD 343
*Q P F Q K S PPTL +PQS Q C +SSS NL ISQKYSPILTPQ T
Sbjct: 432 PIP*QAPQFWQ*KNLSRPPTLQIPQSSQ*NCSFEISSSKNLQISQKYSPILTPQFEQTLA 253
Query: 342 TGCFV 328
T C V
Sbjct: 252 TSCSV 238
Score = 117 bits (251), Expect(2) = 8e-026
Identities = 70/200 (35%), Positives = 103/200 (51%)
Frame = -3 / -2
Query: 877 VVRSAVAALVANHVKVHL*DLVAIVAKHPNLVAIHKRHDRGFDLLIQHFPMMCQIKSCFR 698
VV +A+ ALV+ +V+ LVA++A++ NL + RH F L I P I
Sbjct: 787 VV*TAITALVSQNVEHSFTPLVAVIAEN*NLKLVLNRHFFFFYLEI**VPRRRHIHH*LG 608
Query: 697 AYWTSVFVMRHHFFKTCQVHCVSTVQNSCSL**VK*ILITDWAILPH*VLHTLMVITEYN 518
W SV V H FK +HC++T + C L +K*ILITD + VL+ + I + +
Sbjct: 607 TNWASVLVFIDHLFKAIHMHCMTTFHHMCGLYRIK*ILITDRTRIFCRVLNARVFIAQAH 428
Query: 517 RIAGPTLHTVEEVFLATNPAYATIDAMVLPFVCIIIIKFAYITKVLSHIDSTAYAHL*HR 338
+A T+ ++E TN +T+ M L F I++ +FA I KV SHID+T A +
Sbjct: 427 SVASSTVLAMKEFVTPTNSTNSTVITMKLFFRNIVVKEFADIAKVFSHIDATIRADFSNL 248
Query: 337 LFCFTE*ANYFFNILTTYCM 278
L T * N F++L M
Sbjct: 247 LLSLTN*TNNLFDVLADQIM 188
Score = 81.3 bits (171), Expect(2) = e-116
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +2 / +2
Query: 149 RDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
+D GK + GCEHY+RRCKI APCCN +F CRHCHN++ S
Sbjct: 47 KDFGKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHNDSANS 166
Score = 45.5 bits (93), Expect(3) = 1e-037
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -1 / -3
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E SLWQWR LQ GA ILH *CSHP
Sbjct: 165 EFAESLWQWRHEKMRLQQGALILHRLL*CSHP 70
Score = 28.1 bits (55), Expect(3) = 1e-037
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1 / -3
Query: 903 SAGRDVVRVLYDLQWLHLWP 844
S G +++RVLY+ Q LHL P
Sbjct: 813 SCGVEILRVLYEPQSLHLCP 754
Score = 22.6 bits (43), Expect(2) = 8e-026
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3 / -2
Query: 262 RSLVVAVAAGEHLVAARCHD 203
R +VVA+AA E +AAR D
Sbjct: 160 RRVVVAMAA*EDEIAARSSD 101
>gb|CA781795.1|CA781795 050D05AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 693
Score = 326 bits (706), Expect(3) = e-112
Identities = 114/172 (66%), Positives = 144/172 (83%)
Frame = +2 / +1
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + RQDV++V+C +C+T+QP +QVC +CGVNMGEYFC IC FYDDDT+K Q+HC DC
Sbjct: 103 DRHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDC 282
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICRVGG+ENFFHC KCGSCY+V LR+NH+CVENSMR +CPICYEYLFDSL+ T V+ CG
Sbjct: 283 GICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYEYLFDSLKDTNVMKCG 462
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYK 787
HTMH+ C+ EM+ +K+ CPICS++ +D++ W+ LD+EIEAT MP YR K
Sbjct: 463 HTMHVECYNEMIKRDKFCCPICSRSVIDMSKTWQRLDEEIEATAMPSDYRDK 618
Score = 166 bits (356), Expect(3) = 8e-048
Identities = 85/151 (56%), Positives = 94/151 (62%)
Frame = -1 / -2
Query: 780 RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCN 601
R + G+ VASIS S++ S LE IGQ L IS H CIVCP F T V
Sbjct: 611 R*SEGIAVASISSSSLCHVLDISITDLEQIGQQNLSRLIISL*HSTCIVCPHFITFVSFR 432
Query: 600 ESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLS 421
ES RYS*Q+GQ IEFST WL R T *QDPHF QWKKFS PPTL +PQS Q C S
Sbjct: 431 ESKRYS*QMGQ**RIEFSTQRWLLRRPTA*QDPHFLQWKKFSRPPTLQIPQSSQ*NCCFS 252
Query: 420 VSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
VSSS*N+ + QKYSP+LTPQ T GC V
Sbjct: 251 VSSS*NMQMLQKYSPMLTPQFEQT*AAGCSV 159
Score = 140 bits (301), Expect = 8e-032
Identities = 67/166 (40%), Positives = 92/166 (55%)
Frame = -3 / -1
Query: 787 LVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSCS 608
LV + RH GFDL I+ P I RA WT+ V H VHCV + C
Sbjct: 618 LVTVI*RHSSGFDLFIESLPCFRHINH*PRANWTTKLVTFDHLVVAFYVHCVPAFHHICV 439
Query: 607 L**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVLP 428
L* VK +L+T+ ++ H*+L+ MV+ + NRI TL +EE+ TN A +T+ AM L
Sbjct: 438 L*RVKKVLVTNGTVMTH*ILNAAMVVAQTNRITRSTLLAMEEILTPTNSANSTVIAMKLL 259
Query: 427 FVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILT 290
F IIII++A K+ SH+D+T +L RL C N+ FN+LT
Sbjct: 258 FFSIIIIEYADAAKIFSHVDTTIRTNLSCRLLCIANRTNHLFNVLT 121
Score = 105 bits (225), Expect(2) = 6e-023
Identities = 63/168 (37%), Positives = 91/168 (54%)
Frame = +1 / +3
Query: 265 FRR*AYNMSSGC*KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLH 444
+ R + + SS * S L L + AG +S+ +LW Q+GR+ L ++ IL***Y + V L
Sbjct: 96 YLRPSRSCSSRR*TSDLFCLRYRAAGSSSLFELWCQHGRIFLQHLHIL***Y*KTTVSLR 275
Query: 445 RLWHMQGWWQGKLLPLCEVWVLLFCYTP**PSVCGXXXXXXXXXXXXVSI*LITRNKSSE 624
LW++Q WW + LPL EVW+LL ++ PS+ V *L +K E
Sbjct: 276 *LWNLQSWWA*EFLPLQEVWILLCGWSAQQPSLR*EFNASSLSHLLRVPF*LSKGHKCDE 455
Query: 625 LWTHNALDMF*RNGGA*QIHLSNML*NSS*FDTSLGNVGSRDRSHDHA 768
+ HNA M R+ *Q+ LSN+L S *+ ++ RDRSH +A
Sbjct: 456 MRAHNARRMLQRDDQT*QVLLSNLLEVSD*YV*NMAETR*RDRSHCYA 599
Score = 68.0 bits (142), Expect(3) = e-112
Identities = 21/29 (72%), Positives = 27/29 (93%)
Frame = +2 / +1
Query: 182 HYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
HY+RRC+I APCCN+VF CRHCHNE+T++
Sbjct: 1 HYKRRCQIRAPCCNEVFDCRHCHNESTST 87
Score = 54.7 bits (113), Expect(3) = e-112
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +2 / +1
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKC 856
K+W+LCNDCN +EV+FH+IG KC
Sbjct: 619 KVWILCNDCNDTTEVHFHIIGQKC 690
Score = 37.3 bits (75), Expect(3) = 8e-048
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = -1 / -2
Query: 261 VASLWQWRQGNTWLQHGATILHL 193
V SL QWRQ T LQHGA I HL
Sbjct: 80 VLSL*QWRQSKTSLQHGALIWHL 12
Score = 29.5 bits (58), Expect(3) = 8e-048
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = -3 / -1
Query: 859 AALVANHVKVHL*DLVAIVAKHPNLV 782
+ ++++V+VH +V IVAK+PNL+
Sbjct: 693 STFLSDYVEVHFCCVVTIVAKYPNLL 616
Score = 24.9 bits (48), Expect(2) = 6e-023
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3 / +2
Query: 771 LCIATRFGCFATIATRSQR 827
+ + RFG FATI T Q+
Sbjct: 605 ITVTRRFGYFATIVTTQQK 661
>emb|BX841616.1|CNS09YKN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB20ZD07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1154
Score = 325 bits (705), Expect(4) = e-106
Identities = 114/172 (66%), Positives = 144/172 (83%)
Frame = +2 / +3
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + RQDV++V+C +C+T+QP +QVC +CGVNMGEYFC IC FYDDDT+K Q+HC DC
Sbjct: 474 DRHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDC 653
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICRVGG+ENFFHC KCGSCY+V LR+NH+CVENSMR +CPICYEYLFDSL+ T V+ CG
Sbjct: 654 GICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYEYLFDSLKDTNVMKCG 833
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYK 787
HTMH+ C+ EM+ +K+ CPICS++ +D++ W+ LD+EIEAT MP YR K
Sbjct: 834 HTMHVECYNEMIKRDKFCCPICSRSVIDMSKTWQRLDEEIEATSMPSDYRDK 989
Score = 165 bits (354), Expect(3) = 2e-043
Identities = 85/151 (56%), Positives = 94/151 (62%)
Frame = -1 / -2
Query: 780 RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCN 601
R + G+ VASIS S++ S LE IGQ L IS H CIVCP F T V
Sbjct: 982 R*SEGIEVASISSSSLCHVLDISITDLEQIGQQNLSRLIISL*HSTCIVCPHFITFVSFR 803
Query: 600 ESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLS 421
ES RYS*Q+GQ IEFST WL R T *QDPHF QWKKFS PPTL +PQS Q C S
Sbjct: 802 ESKRYS*QMGQ**RIEFSTQRWLLRRPTA*QDPHFLQWKKFSRPPTLQIPQSSQ*NCCFS 623
Query: 420 VSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
VSSS*N+ + QKYSP+LTPQ T GC V
Sbjct: 622 VSSS*NMQMLQKYSPMLTPQFEQT*AAGCSV 530
Score = 140 bits (301), Expect = 8e-032
Identities = 67/166 (40%), Positives = 93/166 (56%)
Frame = -3 / -1
Query: 787 LVAIHKRHDRGFDLLIQHFPMMCQIKSCFRAYWTSVFVMRHHFFKTCQVHCVSTVQNSCS 608
LV + RH GFDL I+ P I + RA WT+ V H VHCV + C
Sbjct: 989 LVTVI*RHRSGFDLFIESLPCFRHINN*PRANWTTKLVTFDHLVVAFYVHCVPAFHHICV 810
Query: 607 L**VK*ILITDWAILPH*VLHTLMVITEYNRIAGPTLHTVEEVFLATNPAYATIDAMVLP 428
L* VK +L+T+ ++ H*+L+ MV+ + NRI TL +EE+ TN A +T+ AM L
Sbjct: 809 L*RVKKVLVTNGTVMTH*ILNAAMVVAQTNRITRSTLLAMEEILTPTNSANSTVIAMKLL 630
Query: 427 FVCIIIIKFAYITKVLSHIDSTAYAHL*HRLFCFTE*ANYFFNILT 290
F IIII++A K+ SH+D+T +L RL C N+ FN+LT
Sbjct: 629 FFSIIIIEYADAAKIFSHVDTTIRTNLSCRLLCIANRTNHLFNVLT 492
Score = 105 bits (223), Expect(2) = 1e-022
Identities = 63/168 (37%), Positives = 91/168 (54%)
Frame = +1 / +2
Query: 265 FRR*AYNMSSGC*KSSLPTL*NKTAGVTSVHKLWSQYGRVLL*YMQIL***YRQRAVPLH 444
+ R + + SS * S L L + AG +S+ +LW Q+GR+ L ++ IL***Y + V L
Sbjct: 467 YLRPSRSCSSRR*TSDLFCLRYRAAGSSSLFELWCQHGRIFLQHLHIL***Y*KTTVSLR 646
Query: 445 RLWHMQGWWQGKLLPLCEVWVLLFCYTP**PSVCGXXXXXXXXXXXXVSI*LITRNKSSE 624
LW++Q WW + LPL EVW+LL ++ PS+ V *L +K E
Sbjct: 647 *LWNLQSWWA*EFLPLQEVWILLCGWSAQQPSLR*EFNASSLSHLLRVPF*LSKGHKCDE 826
Query: 625 LWTHNALDMF*RNGGA*QIHLSNML*NSS*FDTSLGNVGSRDRSHDHA 768
+ HNA M R+ *Q+ LSN+L S *+ ++ RDRSH +A
Sbjct: 827 MRAHNARRMLQRDDQT*QVLLSNLLEVSY*YV*NMAETR*RDRSHFYA 970
Score = 58.3 bits (121), Expect(4) = e-106
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2 / +2
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVF 232
DR GKM GC+HY+RRC+I APCCN+VF
Sbjct: 332 DRLHFGKMGFGCKHYKRRCQIRAPCCNEVF 421
Score = 33.6 bits (67), Expect(4) = e-106
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2 / +3
Query: 785 KIWVLCNDCNKVSEVN 832
K+W+LC+DCN +EV+
Sbjct: 990 KVWILCHDCNDTTEVH 1037
Score = 30.9 bits (61), Expect(3) = 2e-043
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -1 / -3
Query: 228 TWLQHGATILHLRR*CSHP 172
T LQHGA I HL *C HP
Sbjct: 417 TSLQHGALIWHLLL*CLHP 361
Score = 29.5 bits (58), Expect(4) = e-106
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +2 / +3
Query: 236 CRHCHNEATAS 268
CRHCHNE+T++
Sbjct: 426 CRHCHNESTST 458
Score = 24.9 bits (48), Expect(2) = 1e-022
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3 / +1
Query: 771 LCIATRFGCFATIATRSQR 827
+ + RFG FATI T Q+
Sbjct: 976 ITVTRRFGYFATIVTTQQK 1032
Score = 22.1 bits (42), Expect(3) = 2e-043
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -3 / -1
Query: 817 LVAIVAKHPNLV 782
+V IVAK+PNL+
Sbjct: 1022 VVTIVAKYPNLL 987
>ref|NM_122198.2| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding
AT5G22920 mRNA, complete cds
Length = 1262
Score = 282 bits (611), Expect(3) = e-106
Identities = 99/172 (57%), Positives = 127/172 (73%)
Frame = +2 / +3
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R +V KV+C LCET+Q V Q C +CGV MG+YFC CKF+DDD K QYHC +CG
Sbjct: 345 RHELPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKKQYHCDECG 524
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICR GG+ENFFHC +C CYS I+ D HQCVE +M NCP+C+EYLFDS + VL CGH
Sbjct: 525 ICRTGGEENFFHCKRCRCCYSKIMEDKHQCVEGAMHHNCPVCFEYLFDSTRDITVLRCGH 704
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
TMHL C ++M HN+YTCP+CSK+ D+++ W+ LD+E+ A MP +Y K+
Sbjct: 705 TMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVAAYPMPKMYENKM 860
Score = 150 bits (322), Expect(2) = 2e-041
Identities = 79/154 (51%), Positives = 87/154 (56%)
Frame = -1 / -2
Query: 789 IL*RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLV 610
IL Y G+ A+ S S+ S LEH G VY LC+ IS H +CIV P RT++
Sbjct: 859 ILFSYIFGIGYAATSSSSFFHRLDMSHMDLEHTGHVYRLCSPISFVHSRCIV*PHRRTVI 680
Query: 609 PCNESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYC 430
ESNRYS Q GQ I STH LS I E*Q H QWKKFS PP L +P S Q YC
Sbjct: 679 SLVESNRYSKQTGQL*CIAPSTHWCLSSIILE*QHRHLLQWKKFSSPPVLQIPHSSQ*YC 500
Query: 429 PLSVSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
L SSS NLH QKY PI TPQL C T C V
Sbjct: 499 FLERSSSKNLHFEQKYFPIHTPQLEQFC*TSCSV 398
Score = 78.0 bits (164), Expect(3) = e-106
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2 / +3
Query: 152 DVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
++G +GC HYRRRCKI APCC+++F CRHCHNEA S
Sbjct: 207 EIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDS 323
Score = 67.0 bits (140), Expect(3) = e-106
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2 / +3
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSR 895
+W+LCNDC + V FH+I HKCS C SYNTR T R
Sbjct: 861 VWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQTQR 968
Score = 42.8 bits (87), Expect(2) = 2e-041
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -1 / -2
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E++ASLWQ Q QHGA ILH *C HP
Sbjct: 322 ESLASLWQCLQSKISSQHGALILHRLL*CEHP 227
>gb|AY052362.1| Arabidopsis thaliana AT5g22920/MRN17_15 mRNA, complete cds
Length = 1183
Score = 282 bits (611), Expect(3) = e-106
Identities = 99/172 (57%), Positives = 127/172 (73%)
Frame = +2 / +2
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R +V KV+C LCET+Q V Q C +CGV MG+YFC CKF+DDD K QYHC +CG
Sbjct: 344 RHELPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKKQYHCDECG 523
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICR GG+ENFFHC +C CYS I+ D HQCVE +M NCP+C+EYLFDS + VL CGH
Sbjct: 524 ICRTGGEENFFHCKRCRCCYSKIMEDKHQCVEGAMHHNCPVCFEYLFDSTRDITVLRCGH 703
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
TMHL C ++M HN+YTCP+CSK+ D+++ W+ LD+E+ A MP +Y K+
Sbjct: 704 TMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVAAYPMPKMYENKM 859
Score = 150 bits (322), Expect(2) = 2e-041
Identities = 79/154 (51%), Positives = 87/154 (56%)
Frame = -1 / -2
Query: 789 IL*RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLV 610
IL Y G+ A+ S S+ S LEH G VY LC+ IS H +CIV P RT++
Sbjct: 858 ILFSYIFGIGYAATSSSSFFHRLDMSHMDLEHTGHVYRLCSPISFVHSRCIV*PHRRTVI 679
Query: 609 PCNESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYC 430
ESNRYS Q GQ I STH LS I E*Q H QWKKFS PP L +P S Q YC
Sbjct: 678 SLVESNRYSKQTGQL*CIAPSTHWCLSSIILE*QHRHLLQWKKFSSPPVLQIPHSSQ*YC 499
Query: 429 PLSVSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
L SSS NLH QKY PI TPQL C T C V
Sbjct: 498 FLERSSSKNLHFEQKYFPIHTPQLEQFC*TSCSV 397
Score = 78.0 bits (164), Expect(3) = e-106
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2 / +2
Query: 152 DVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
++G +GC HYRRRCKI APCC+++F CRHCHNEA S
Sbjct: 206 EIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDS 322
Score = 67.0 bits (140), Expect(3) = e-106
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2 / +2
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSR 895
+W+LCNDC + V FH+I HKCS C SYNTR T R
Sbjct: 860 VWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQTQR 967
Score = 42.8 bits (87), Expect(2) = 2e-041
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -1 / -2
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E++ASLWQ Q QHGA ILH *C HP
Sbjct: 321 ESLASLWQCLQSKISSQHGALILHRLL*CEHP 226
>gb|AY088138.1| Arabidopsis thaliana clone 41666 mRNA, complete sequence
Length = 1145
Score = 282 bits (611), Expect(3) = e-106
Identities = 99/172 (57%), Positives = 127/172 (73%)
Frame = +2 / +2
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R +V KV+C LCET+Q V Q C +CGV MG+YFC CKF+DDD K QYHC +CG
Sbjct: 344 RHELPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKKQYHCDECG 523
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICR GG+ENFFHC +C CYS I+ D HQCVE +M NCP+C+EYLFDS + VL CGH
Sbjct: 524 ICRTGGEENFFHCKRCRCCYSKIMEDKHQCVEGAMHHNCPVCFEYLFDSTRDITVLRCGH 703
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
TMHL C ++M HN+YTCP+CSK+ D+++ W+ LD+E+ A MP +Y K+
Sbjct: 704 TMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVAAYPMPKLYENKM 859
Score = 150 bits (323), Expect(2) = 1e-041
Identities = 79/154 (51%), Positives = 87/154 (56%)
Frame = -1 / -3
Query: 789 IL*RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLV 610
IL Y G+ A+ S S+ S LEH G VY LC+ IS H +CIV P RT++
Sbjct: 858 ILFSYNFGIGYAATSSSSFFHRLDMSHMDLEHTGHVYRLCSPISFVHSRCIV*PHRRTVI 679
Query: 609 PCNESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYC 430
ESNRYS Q GQ I STH LS I E*Q H QWKKFS PP L +P S Q YC
Sbjct: 678 SLVESNRYSKQTGQL*CIAPSTHWCLSSIILE*QHRHLLQWKKFSSPPVLQIPHSSQ*YC 499
Query: 429 PLSVSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
L SSS NLH QKY PI TPQL C T C V
Sbjct: 498 FLERSSSKNLHFEQKYFPIHTPQLEQFC*TSCSV 397
Score = 78.0 bits (164), Expect(3) = e-106
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2 / +2
Query: 152 DVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
++G +GC HYRRRCKI APCC+++F CRHCHNEA S
Sbjct: 206 EIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDS 322
Score = 67.0 bits (140), Expect(3) = e-106
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2 / +2
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSR 895
+W+LCNDC + V FH+I HKCS C SYNTR T R
Sbjct: 860 VWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQTQR 967
Score = 42.8 bits (87), Expect(2) = 1e-041
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -1 / -3
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E++ASLWQ Q QHGA ILH *C HP
Sbjct: 321 ESLASLWQCLQSKISSQHGALILHRLL*CEHP 226
>gb|BT002635.1| Arabidopsis thaliana At5g22920/MRN17_15 gene, complete cds
Length = 876
Score = 282 bits (611), Expect(3) = e-106
Identities = 99/172 (57%), Positives = 127/172 (73%)
Frame = +2 / +1
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R +V KV+C LCET+Q V Q C +CGV MG+YFC CKF+DDD K QYHC +CG
Sbjct: 193 RHELPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKKQYHCDECG 372
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICR GG+ENFFHC +C CYS I+ D HQCVE +M NCP+C+EYLFDS + VL CGH
Sbjct: 373 ICRTGGEENFFHCKRCRCCYSKIMEDKHQCVEGAMHHNCPVCFEYLFDSTRDITVLRCGH 552
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
TMHL C ++M HN+YTCP+CSK+ D+++ W+ LD+E+ A MP +Y K+
Sbjct: 553 TMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVAAYPMPKMYENKM 708
Score = 150 bits (322), Expect(2) = 2e-041
Identities = 79/154 (51%), Positives = 87/154 (56%)
Frame = -1 / -2
Query: 789 IL*RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLV 610
IL Y G+ A+ S S+ S LEH G VY LC+ IS H +CIV P RT++
Sbjct: 707 ILFSYIFGIGYAATSSSSFFHRLDMSHMDLEHTGHVYRLCSPISFVHSRCIV*PHRRTVI 528
Query: 609 PCNESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYC 430
ESNRYS Q GQ I STH LS I E*Q H QWKKFS PP L +P S Q YC
Sbjct: 527 SLVESNRYSKQTGQL*CIAPSTHWCLSSIILE*QHRHLLQWKKFSSPPVLQIPHSSQ*YC 348
Query: 429 PLSVSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
L SSS NLH QKY PI TPQL C T C V
Sbjct: 347 FLERSSSKNLHFEQKYFPIHTPQLEQFC*TSCSV 246
Score = 78.0 bits (164), Expect(3) = e-106
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2 / +1
Query: 152 DVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
++G +GC HYRRRCKI APCC+++F CRHCHNEA S
Sbjct: 55 EIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDS 171
Score = 67.0 bits (140), Expect(3) = e-106
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2 / +1
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSR 895
+W+LCNDC + V FH+I HKCS C SYNTR T R
Sbjct: 709 VWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQTQR 816
Score = 42.8 bits (87), Expect(2) = 2e-041
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -1 / -2
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E++ASLWQ Q QHGA ILH *C HP
Sbjct: 170 ESLASLWQCLQSKISSQHGALILHRLL*CEHP 75
>gb|DQ059131.1| Arabidopsis thaliana RING finger family protein (At5g22920) mRNA,
complete cds
Length = 876
Score = 282 bits (611), Expect(3) = e-106
Identities = 99/172 (57%), Positives = 127/172 (73%)
Frame = +2 / +1
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH + R +V KV+C LCET+Q V Q C +CGV MG+YFC CKF+DDD K QYHC +CG
Sbjct: 193 RHELPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKKQYHCDECG 372
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICR GG+ENFFHC +C CYS I+ D HQCVE +M NCP+C+EYLFDS + VL CGH
Sbjct: 373 ICRTGGEENFFHCKRCRCCYSKIMEDKHQCVEGAMHHNCPVCFEYLFDSTRDITVLRCGH 552
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
TMHL C ++M HN+YTCP+CSK+ D+++ W+ LD+E+ A MP +Y K+
Sbjct: 553 TMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVAAYPMPKMYENKM 708
Score = 150 bits (322), Expect(2) = 2e-041
Identities = 79/154 (51%), Positives = 87/154 (56%)
Frame = -1 / -2
Query: 789 IL*RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLV 610
IL Y G+ A+ S S+ S LEH G VY LC+ IS H +CIV P RT++
Sbjct: 707 ILFSYIFGIGYAATSSSSFFHRLDMSHMDLEHTGHVYRLCSPISFVHSRCIV*PHRRTVI 528
Query: 609 PCNESNRYS*QIGQFCLIEFSTH*WLSRSITE*QDPHFTQWKKFSLPPTLHMPQSMQWYC 430
ESNRYS Q GQ I STH LS I E*Q H QWKKFS PP L +P S Q YC
Sbjct: 527 SLVESNRYSKQTGQL*CIAPSTHWCLSSIILE*QHRHLLQWKKFSSPPVLQIPHSSQ*YC 348
Query: 429 PLSVSSS*NLHISQKYSPILTPQLMHTCDTGCFV 328
L SSS NLH QKY PI TPQL C T C V
Sbjct: 347 FLERSSSKNLHFEQKYFPIHTPQLEQFC*TSCSV 246
Score = 78.0 bits (164), Expect(3) = e-106
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2 / +1
Query: 152 DVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
++G +GC HYRRRCKI APCC+++F CRHCHNEA S
Sbjct: 55 EIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDS 171
Score = 67.0 bits (140), Expect(3) = e-106
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2 / +1
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSR 895
+W+LCNDC + V FH+I HKCS C SYNTR T R
Sbjct: 709 VWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQTQR 816
Score = 42.8 bits (87), Expect(2) = 2e-041
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -1 / -2
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E++ASLWQ Q QHGA ILH *C HP
Sbjct: 170 ESLASLWQCLQSKISSQHGALILHRLL*CEHP 75
>ref|NM_122467.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
zinc ion binding AT5G25560 mRNA, complete cds
Length = 1034
Score = 280 bits (606), Expect(3) = e-101
Identities = 99/172 (57%), Positives = 125/172 (72%)
Frame = +2 / +3
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH I R VE+V+CLLC T+Q V Q+CI CGV MG+YFC +CK YDDDT K QYHC CG
Sbjct: 408 RHDIPRHQVEQVICLLCGTEQEVGQICIHCGVCMGKYFCKVCKLYDDDTSKKQYHCDGCG 587
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICR+GG+ENFFHC KCG CYS++L++ H CVE +M +CPIC+E+LF+S VL CGH
Sbjct: 588 ICRIGGRENFFHCYKCGCCYSILLKNGHPCVEGAMHHDCPICFEFLFESRNDVTVLPCGH 767
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
T+H C EEM H +Y CP+CSK+ D++ WE D EI AT MP Y+ ++
Sbjct: 768 TIHQKCLEEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNRM 923
Score = 77.6 bits (163), Expect(2) = 1e-022
Identities = 35/63 (55%), Positives = 39/63 (61%)
Frame = -1 / -2
Query: 516 E*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLMHTCDTG 337
E*Q PH Q KKFS PP L +P QWYC L VSSS*+L QKY P+ TPQ + T
Sbjct: 649 E*QQPHL*Q*KKFSRPPILQIPHPSQWYCFLDVSSS*SLQTLQKYFPMHTPQWIQIWPTS 470
Query: 336 CFV 328
C V
Sbjct: 469 CSV 461
Score = 72.1 bits (151), Expect(3) = e-101
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2 / +3
Query: 152 DVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEA 259
D G M++GC HYRRRC I APCCN++F C HCH EA
Sbjct: 270 DRGLMEYGCPHYRRRCCIRAPCCNEIFGCHHCHYEA 377
Score = 60.2 bits (125), Expect(3) = e-101
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2 / +3
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
+ +LCNDC K +EV +HV+ KC +C+SYNTR T
Sbjct: 924 VQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQT 1025
Score = 51.9 bits (107), Expect(2) = 1e-022
Identities = 35/82 (42%), Positives = 42/82 (51%)
Frame = -1 / -2
Query: 789 IL*RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLV 610
IL Y G+ VA+IS SN S S E G Y + ISSKH IVCP +T+
Sbjct: 922 ILFWYGSGIGVAAISMSNFSHTFDMSHTDFEQSGHAYW**SLISSKHF**IVCPHGKTVT 743
Query: 609 PCNESNRYS*QIGQFCLIEFST 544
+SNR S Q+GQ I ST
Sbjct: 742 SFRDSNRNSKQMGQS*CIAPST 677
>gb|AY070720.1| Arabidopsis thaliana AT5g25560/T14C9_100 mRNA sequence
Length = 2903
Score = 280 bits (606), Expect(3) = 1e-098
Identities = 99/172 (57%), Positives = 125/172 (72%)
Frame = +2 / +2
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH I R VE+V+CLLC T+Q V Q+CI CGV MG+YFC +CK YDDDT K QYHC CG
Sbjct: 1964 RHDIPRHQVEQVICLLCGTEQEVGQICIHCGVCMGKYFCKVCKLYDDDTSKKQYHCDGCG 2143
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICR+GG+ENFFHC KCG CYS++L++ H CVE +M +CPIC+E+LF+S VL CGH
Sbjct: 2144 ICRIGGRENFFHCYKCGCCYSILLKNGHPCVEGAMHHDCPICFEFLFESRNDVTVLPCGH 2323
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
T+H C EEM H +Y CP+CSK+ D++ WE D EI AT MP Y+ ++
Sbjct: 2324 TIHQKCLEEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNRM 2479
Score = 77.6 bits (163), Expect(2) = 1e-022
Identities = 35/63 (55%), Positives = 39/63 (61%)
Frame = -1 / -3
Query: 516 E*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLMHTCDTG 337
E*Q PH Q KKFS PP L +P QWYC L VSSS*+L QKY P+ TPQ + T
Sbjct: 2205 E*QQPHL*Q*KKFSRPPILQIPHPSQWYCFLDVSSS*SLQTLQKYFPMHTPQWIQIWPTS 2026
Query: 336 CFV 328
C V
Sbjct: 2025 CSV 2017
Score = 62.5 bits (130), Expect(3) = 1e-098
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +2 / +2
Query: 176 CEHYRRRCKIVAPCCNQVFPCRHCHNEA 259
C HYRRRC I APCCN++F C HCH EA
Sbjct: 1850 CPHYRRRCCIRAPCCNEIFGCHHCHYEA 1933
Score = 60.2 bits (125), Expect(3) = 1e-098
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2 / +2
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
+ +LCNDC K +EV +HV+ KC +C+SYNTR T
Sbjct: 2480 VQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQT 2581
Score = 51.9 bits (107), Expect(2) = 1e-022
Identities = 35/82 (42%), Positives = 42/82 (51%)
Frame = -1 / -3
Query: 789 IL*RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLV 610
IL Y G+ VA+IS SN S S E G Y + ISSKH IVCP +T+
Sbjct: 2478 ILFWYGSGIGVAAISMSNFSHTFDMSHTDFEQSGHAYW**SLISSKHF**IVCPHGKTVT 2299
Query: 609 PCNESNRYS*QIGQFCLIEFST 544
+SNR S Q+GQ I ST
Sbjct: 2298 SFRDSNRNSKQMGQS*CIAPST 2233
>emb|BX831389.1|CNS0A1NP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS85ZE03 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2640
Score = 274 bits (592), Expect(3) = 4e-094
Identities = 97/172 (56%), Positives = 123/172 (71%)
Frame = +2 / +3
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH I R VE+V+CLLC T+Q V Q+CI CGV MG+YFC +CK YDDDT K QYHC CG
Sbjct: 1767 RHDIPRHQVEQVICLLCGTEQEVGQICIHCGVCMGKYFCKVCKLYDDDTSKKQYHCDGCG 1946
Query: 455 ICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGH 634
ICR+GG+EN FHC KCG CYS++L++ H CVE +M +CPIC+E+L +S VL CGH
Sbjct: 1947 ICRIGGRENLFHCYKCGCCYSILLKNGHPCVEGAMHHDCPICFEFLSESRNDVTVLPCGH 2126
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
T+H C EEM H +Y CP+CSK+ D++ WE D EI AT MP Y+ ++
Sbjct: 2127 TIHQKCLEEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNRM 2282
Score = 76.2 bits (160), Expect(2) = 2e-021
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = -1 / -3
Query: 516 E*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLMHTCDTG 337
E*Q PH Q K+FS PP L +P QWYC L VSSS*+L QKY P+ TPQ + T
Sbjct: 2008 E*QQPHL*Q*KRFSRPPILQIPHPSQWYCFLDVSSS*SLQTLQKYFPMHTPQWIQIWPTS 1829
Query: 336 CFV 328
C V
Sbjct: 1828 CSV 1820
Score = 60.2 bits (125), Expect(3) = 4e-094
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2 / +3
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
+ +LCNDC K +EV +HV+ KC +C+SYNTR T
Sbjct: 2283 VQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQT 2384
Score = 53.8 bits (111), Expect(3) = 4e-094
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +2 / +3
Query: 164 MKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEA 259
+ G Y RRC I APCCN++F C HCH EA
Sbjct: 1641 LDRGLMEYGRRCCIRAPCCNEIFGCHHCHYEA 1736
Score = 49.6 bits (102), Expect(2) = 2e-021
Identities = 34/82 (41%), Positives = 42/82 (51%)
Frame = -1 / -3
Query: 789 IL*RYTRGMIVASIS*SNISQ*CVKSRAVLEHIGQVYLLCATISSKHVKCIVCPQFRTLV 610
IL Y G+ VA+IS SN S S E G Y + ISSKH IVCP +T+
Sbjct: 2281 ILFWYGSGIGVAAISMSNFSHTFDMSHTDFEQSGHAYW**SLISSKHF**IVCPHGKTVT 2102
Query: 609 PCNESNRYS*QIGQFCLIEFST 544
+S+R S Q+GQ I ST
Sbjct: 2101 SFRDSDRNSKQMGQS*CIAPST 2036
>gb|BP562733.1|BP562733 BP562733 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-39-O20 5',
mRNA sequence
Length = 662
Score = 274 bits (593), Expect(2) = 3e-090
Identities = 90/148 (60%), Positives = 121/148 (81%)
Frame = +2 / +3
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
+RH + RQ+V++VVC +C+T+Q V++VC +CGVNMGEYFCDICKF+DDD K Q+HC DC
Sbjct: 219 ERHDLVRQNVKQVVCSICQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHCDDC 398
Query: 452 GICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCG 631
GICRVGG++ FFHC CG+CY + LRD H C+ENS + +CP+CYEYLFDS++ V+ CG
Sbjct: 399 GICRVGGRDKFFHCQNCGACYGMGLRDKHSCIENSTKNSCPVCYEYLFDSVKAAHVMKCG 578
Query: 632 HTMHLTCFEEMVAHNKYTCPICSKTALD 715
HTMH+ CFE+M+ N+Y CPIC+K+ +D
Sbjct: 579 HTMHMDCFEQMINENQYRCPICAKSMVD 662
Score = 130 bits (279), Expect(2) = 2e-036
Identities = 67/125 (53%), Positives = 70/125 (56%)
Frame = -1 / -2
Query: 702 LEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS*QIGQFCLIEFSTH*WLSRS 523
L IG Y I SK CIV P F T ESNRYS*Q GQ +EFS H LSR
Sbjct: 649 LAQIGHRYWFSLIICSKQSICIV*PHFITCAAFTESNRYS*QTGQEFFVEFSMHECLSRK 470
Query: 522 ITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQKYSPILTPQLMHTCD 343
*Q P F Q K S PPTL +PQS Q C +SSS NL ISQKYSPILTPQ T
Sbjct: 469 PIP*QAPQFWQ*KNLSRPPTLQIPQSSQ*NCSFEISSSKNLQISQKYSPILTPQFEQTLA 290
Query: 342 TGCFV 328
T C V
Sbjct: 289 TSCSV 275
Score = 81.7 bits (172), Expect(2) = 3e-090
Identities = 30/65 (46%), Positives = 40/65 (61%)
Frame = +2 / +3
Query: 74 MGGAQFPGDNDVAEVDAARDGEVDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHN 253
+GG+ + + AA +D GK + GCEHY+RRCKI APCCN +F CRHCHN
Sbjct: 9 VGGSASLQSDSMEAAAAADSSIPRDKDFGKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHN 188
Query: 254 EATAS 268
++ S
Sbjct: 189 DSANS 203
Score = 45.5 bits (93), Expect(2) = 2e-036
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -1 / -2
Query: 267 EAVASLWQWRQGNTWLQHGATILHLRR*CSHP 172
E SLWQWR LQ GA ILH *CSHP
Sbjct: 202 EFAESLWQWRHEKMRLQQGALILHRLL*CSHP 107
>gb|AC051627.4|AC051627 Genomic Sequence For Arabidopsis thaliana Clone T1A4 From Chromosome V,
complete sequence
Length = 85746
Score = 78.0 bits (164), Expect(7) = 1e-066
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +2 / -3
Query: 770 LVYRYKIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
++ + ++W+LCNDCN +EV+FH+IG KC HCRSYNTR + P
Sbjct: 42118 MMRKSQVWILCNDCNDTTEVHFHIIGQKCGHCRSYNTRAIAPP 41990
Score = 71.6 bits (150), Expect(7) = 1e-066
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = +2 / -1
Query: 176 CEHYRRRCKIVAPCCNQVFPCRHCHNEAT 262
C+HY+RRC+I APCCN+VF CRHCHNE+T
Sbjct: 43692 CKHYKRRCQIRAPCCNEVFDCRHCHNEST 43606
Score = 65.2 bits (136), Expect(7) = 1e-066
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +2 / -1
Query: 488 HCVKCGSCYSVILRDNHQCVENSMRQNCPICYE 586
H + GSCY+V LR+NH+CVENSMR +CPICYE
Sbjct: 42798 HYLLLGSCYAVGLRNNHRCVENSMRHHCPICYE 42700
Score = 58.8 bits (122), Expect(7) = 1e-066
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2 / -2
Query: 344 SQVCISCGVNMGEYFCDICKFYDDD 418
+QVC +CGVNMGEYFC IC FYDDD
Sbjct: 43223 AQVCSNCGVNMGEYFCSICIFYDDD 43149
Score = 55.6 bits (115), Expect(7) = 1e-066
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +2 / -1
Query: 584 EYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNK 679
+YLFDSL+ T V+ CGHTMH+ C+ EM+ +K
Sbjct: 42615 QYLFDSLKDTNVMKCGHTMHVECYNEMIKRDK 42520
Score = 44.1 bits (90), Expect(7) = 1e-066
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2 / -3
Query: 458 CRVGGKENFFHCVKCG 505
CRVGG+ENFFHC KCG
Sbjct: 42925 CRVGGRENFFHCKKCG 42878
Score = 42.3 bits (86), Expect(7) = 1e-066
Identities = 12/35 (34%), Positives = 25/35 (71%)
Frame = +2 / -3
Query: 653 FEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEA 757
FE + +++ CPICS++ +D++ W+ LD+E+ +
Sbjct: 42442 FENV*ILSRFCCPICSRSVIDMSKTWQRLDEEVSS 42338
>gb|T43488.1|T43488 6751 Lambda-PRL2 Arabidopsis thaliana cDNA clone 118P23T7, mRNA
sequence
Length = 483
Score = 238 bits (515), Expect = 3e-061
Identities = 82/124 (66%), Positives = 103/124 (83%)
Frame = +2 / +1
Query: 383 YFCDICKFYDDDTDKGQYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMR 562
YFC IC FYDDDT+K Q+HC DCGICRVGG+ENFFHC KCGSCY+V LR+NH+CVENSMR
Sbjct: 1 YFCSICIFYDDDTEKQQFHCDDCGICRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMR 180
Query: 563 QNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLD 742
+CPICYEYLFDSL+ T V+ CGHTMH+ C+ EM+ +K+ CPI S++ +D++ W+ LD
Sbjct: 181 HHCPICYEYLFDSLKDTNVMKCGHTMHVECYNEMIKRDKFCCPIFSRSVIDMSKTWQXLD 360
Query: 743 QEIE 754
+ IE
Sbjct: 361 EGIE 372
Score = 133 bits (284), Expect = 2e-029
Identities = 65/106 (61%), Positives = 69/106 (65%)
Frame = -1 / -2
Query: 702 LEHIGQVYLLCATISSKHVKCIVCPQFRTLVPCNESNRYS*QIGQFCLIEFSTH*WLSRS 523
LE IGQ L IS H CIVCP F T V ES RYS*Q+GQ IEFST WL R
Sbjct: 320 LEKIGQQNLSRLIISL*HSTCIVCPHFITFVSFRESKRYS*QMGQ**RIEFSTQRWLLRR 141
Query: 522 ITE*QDPHFTQWKKFSLPPTLHMPQSMQWYCPLSVSSS*NLHISQK 385
T *QDPHF QWKKFS PPTL +PQS Q C SVSSS*N+ + QK
Sbjct: 140 PTA*QDPHFLQWKKFSRPPTLQIPQSSQ*NCCFSVSSS*NMQMLQK 3
>gb|AV540574.1|AV540574 AV540574 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ152a05F 3', mRNA sequence
Length = 496
Score = 171 bits (369), Expect(2) = 8e-057
Identities = 64/108 (59%), Positives = 81/108 (75%)
Frame = +2 / -1
Query: 464 VGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMH 643
VGG+ENFFH KCGSCY+V LR + +CVE SMR +C ICYEYLFDSL+ T V+ CGHTMH
Sbjct: 496 VGGRENFFHGKKCGSCYAVGLRTSLRCVEYSMRHHCHICYEYLFDSLKDTNVMKCGHTMH 317
Query: 644 LTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYK 787
+ C+ EM+ K+ CPICS++ +D+ W LD+EIEA+ MP YR K
Sbjct: 316 VECYNEMIKRVKFCCPICSRSVIDMCKTWHRLDEEIEASAMPSDYRDK 173
Score = 72.5 bits (152), Expect(2) = 8e-057
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +2 / -1
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
K+W+LCNDC +EV FH+IG KC HCRSY+TR + P
Sbjct: 172 KVWILCNDCTVSTEVQFHIIGQKCGHCRSYSTRAIAPP 59
>emb|AL163816.1|ATT20O10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20O10
Length = 83122
Score = 69.3 bits (145), Expect(7) = 9e-057
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +2 / +2
Query: 176 CEHYRRRCKIVAPCCNQVFPCRHCHNEA 259
CEHY+RRCKI APCCN +F CRHCHN++
Sbjct: 13709 CEHYKRRCKIRAPCCNLIFSCRHCHNDS 13792
Score = 67.5 bits (141), Expect(7) = 9e-057
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +2 / +3
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
++ +LCNDCNK S+ FH++GHKCS C SYNTR S P
Sbjct: 15444 QVSILCNDCNKGSKAMFHILGHKCSDCGSYNTRRISTP 15557
Score = 63.4 bits (132), Expect(7) = 9e-057
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +2 / +2
Query: 341 VSQVCISCGVNMGEYFCDICKFYDDD 418
V++VC +CGVNMGEYFCDICKF+DDD
Sbjct: 14138 VAKVCSNCGVNMGEYFCDICKFFDDD 14215
Score = 56.1 bits (116), Expect(7) = 9e-057
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +2 / +1
Query: 581 YEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNK 679
++YLFDS++ V+ CGHTMH+ CFE+M+ N+
Sbjct: 15001 WQYLFDSVKAAHVMKCGHTMHMDCFEQMINENQ 15099
Score = 54.2 bits (112), Expect(7) = 9e-057
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2 / +2
Query: 503 GSCYSVILRDNHQCVENSMRQNCPICYE 586
G+CY + LRD H C+ENS + +CP+CYE
Sbjct: 14834 GACYGMGLRDKHSCIENSTKNSCPVCYE 14917
Score = 38.6 bits (78), Expect(7) = 9e-057
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 677 KYTCPICSKTALDLTHHWEMLDQEI 751
+Y CPIC+K+ +D++ W +LD E+
Sbjct: 15181 RYRCPICAKSMVDMSPSWHLLDFEV 15255
Score = 32.2 bits (64), Expect(7) = 9e-057
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 425 KGQYHCIDCGICR 463
K Q+HC DCGICR
Sbjct: 14327 KEQFHCDDCGICR 14365
>dbj|AB005243.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRN17
Length = 86065
Score = 70.7 bits (148), Expect(7) = 9e-056
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +2 / +2
Query: 176 CEHYRRRCKIVAPCCNQVFPCRHCHNEA 259
C HYRRRCKI APCC+++F CRHCHNEA
Sbjct: 59801 CSHYRRRCKIRAPCCDEIFDCRHCHNEA 59884
Score = 67.5 bits (141), Expect(7) = 9e-056
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSR 895
++W+LCNDC + V FH+I HKCS C SYNTR T R
Sbjct: 61345 QVWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQTQR 61455
Score = 58.8 bits (122), Expect(7) = 9e-056
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +2 / +3
Query: 476 ENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYE 586
E F +K G CYS I+ D HQCVE +M NCP+C+E
Sbjct: 60681 EILFCFLKTGCCYSKIMEDKHQCVEGAMHHNCPVCFE 60791
Score = 56.1 bits (116), Expect(7) = 9e-056
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2 / +3
Query: 575 ICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNK 679
IC +YLFDS + VL CGHTMHL C ++M HN+
Sbjct: 60864 ICSQYLFDSTRDITVLRCGHTMHLECTKDMGLHNR 60968
Score = 49.6 bits (102), Expect(7) = 9e-056
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2 / +2
Query: 341 VSQVCISCGVNMGEYFCDICKFYDDD 418
V Q C +CGV MG+YFC CKF+DDD
Sbjct: 60278 VQQNCSNCGVCMGKYFCSKCKFFDDD 60355
Score = 43.2 bits (88), Expect(7) = 9e-056
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +2 / +3
Query: 677 KYTCPICSKTALDLTHHWEMLDQEI 751
+YTCP+CSK+ D+++ W+ LD+E+
Sbjct: 61053 RYTCPVCSKSICDMSNLWKKLDEEV 61127
Score = 32.2 bits (64), Expect(7) = 9e-056
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 425 KGQYHCIDCGICR 463
K QYHC +CGICR
Sbjct: 60439 KKQYHCDECGICR 60477
>gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V map near 60.5 cM, complete sequence
Length = 110684
Score = 62.5 bits (130), Expect(8) = 2e-054
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +2 / +3
Query: 176 CEHYRRRCKIVAPCCNQVFPCRHCHNEA 259
C HYRRRC I APCCN++F C HCH EA
Sbjct: 57537 CPHYRRRCCIRAPCCNEIFGCHHCHYEA 57620
Score = 60.6 bits (126), Expect(8) = 2e-054
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +2 / +1
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
++ +LCNDC K +EV +HV+ KC +C+SYNTR T
Sbjct: 59068 QVQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQT 59172
Score = 55.6 bits (115), Expect(8) = 2e-054
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2 / +2
Query: 341 VSQVCISCGVNMGEYFCDICKFYDDD 418
V Q+CI CGV MG+YFC +CK YDDD
Sbjct: 58013 VGQICIHCGVCMGKYFCKVCKLYDDD 58090
Score = 54.2 bits (112), Expect(8) = 2e-054
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +2 / +1
Query: 494 VKCGSCYSVILRDNHQCVENSMRQNCPICYEYL 592
+K G CYS++L++ H CVE +M +CPIC+E L
Sbjct: 58510 LKPGCCYSILLKNGHPCVEGAMHHDCPICFEVL 58608
Score = 49.2 bits (101), Expect(8) = 2e-054
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2 / +2
Query: 677 KYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
+Y CP+CSK+ D++ WE D EI AT MP Y+ ++
Sbjct: 58874 RYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNRM 58987
Score = 43.2 bits (88), Expect(8) = 2e-054
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2 / +1
Query: 575 ICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAH 673
+ +++LF+S VL CGHT+H C EEM H
Sbjct: 58684 VFFQFLFESRNDVTVLPCGHTIHQKCLEEMRDH 58782
Score = 40.5 bits (82), Expect(8) = 2e-054
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 461 RVGGKENFFHCVKCGSCYS 517
R+GG+ENFFHC KCG ++
Sbjct: 58369 RIGGRENFFHCYKCGKPFT 58425
Score = 33.1 bits (66), Expect(8) = 2e-054
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2 / +3
Query: 419 TDKGQYHCIDCGICR 463
T K QYHC CGICR
Sbjct: 58233 TSKKQYHCDGCGICR 58277
>gb|BT011670.1| Arabidopsis thaliana At1g74760 mRNA, complete cds
Length = 768
Score = 66.1 bits (138), Expect(7) = 1e-049
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +2 / +1
Query: 536 HQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEE 661
H C E + NCPIC+EY+F S + L CGH MH TCF+E
Sbjct: 412 HVCREKCLEDNCPICHEYIFTSSSPVKALPCGHLMHSTCFQE 537
Score = 60.2 bits (125), Expect(7) = 1e-049
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2 / +1
Query: 149 RDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNE 256
RD + GC HY+R CK++APCC+++F C CH+E
Sbjct: 34 RDPHSLIFGCNHYKRNCKLLAPCCDKLFTCIRCHDE 141
Score = 45.5 bits (93), Expect(7) = 1e-049
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / +1
Query: 794 VLCNDCNKVSEVNFHVIGHKCSHCRSYNTR 883
+LCNDC + +H + HKC+ C SYN+R
Sbjct: 670 ILCNDCGRKGNAPYHWLYHKCTTCGSYNSR 759
Score = 40.5 bits (82), Expect(7) = 1e-049
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 359 SCGVNMGEYFCDICKFYDDD 418
SC +MG+YFC ICK YDD+
Sbjct: 238 SCKSSMGKYFCKICKLYDDE 297
Score = 38.6 bits (78), Expect(7) = 1e-049
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2 / +1
Query: 680 YTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKIWVL 799
YTCP+CSK+ D+ +++MLD + MP Y K V+
Sbjct: 553 YTCPVCSKSLGDMQVYFKMLDALLAEEKMPDEYSNKTQVI 672
Score = 29.0 bits (57), Expect(7) = 1e-049
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +1
Query: 416 DTDKGQYHCIDCGICRVG 469
D ++ YHC C +CRVG
Sbjct: 289 DDERKIYHCPYCNLCRVG 342
Score = 28.1 bits (55), Expect(7) = 1e-049
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 479 NFFHCVKCGSCYS 517
++FHC+KC +C S
Sbjct: 358 DYFHCMKCNACMS 396
>gb|DQ086838.1| Arabidopsis thaliana At1g74760 mRNA, complete cds
Length = 768
Score = 66.1 bits (138), Expect(7) = 1e-049
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +2 / +1
Query: 536 HQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEE 661
H C E + NCPIC+EY+F S + L CGH MH TCF+E
Sbjct: 412 HVCREKCLEDNCPICHEYIFTSSSPVKALPCGHLMHSTCFQE 537
Score = 60.2 bits (125), Expect(7) = 1e-049
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2 / +1
Query: 149 RDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNE 256
RD + GC HY+R CK++APCC+++F C CH+E
Sbjct: 34 RDPHSLIFGCNHYKRNCKLLAPCCDKLFTCIRCHDE 141
Score = 45.5 bits (93), Expect(7) = 1e-049
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / +1
Query: 794 VLCNDCNKVSEVNFHVIGHKCSHCRSYNTR 883
+LCNDC + +H + HKC+ C SYN+R
Sbjct: 670 ILCNDCGRKGNAPYHWLYHKCTTCGSYNSR 759
Score = 40.5 bits (82), Expect(7) = 1e-049
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 359 SCGVNMGEYFCDICKFYDDD 418
SC +MG+YFC ICK YDD+
Sbjct: 238 SCKSSMGKYFCKICKLYDDE 297
Score = 38.6 bits (78), Expect(7) = 1e-049
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2 / +1
Query: 680 YTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKIWVL 799
YTCP+CSK+ D+ +++MLD + MP Y K V+
Sbjct: 553 YTCPVCSKSLGDMQVYFKMLDALLAEEKMPDEYSNKTQVI 672
Score = 29.0 bits (57), Expect(7) = 1e-049
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +1
Query: 416 DTDKGQYHCIDCGICRVG 469
D ++ YHC C +CRVG
Sbjct: 289 DDERKIYHCPYCNLCRVG 342
Score = 28.1 bits (55), Expect(7) = 1e-049
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 479 NFFHCVKCGSCYS 517
++FHC+KC +C S
Sbjct: 358 DYFHCMKCNACMS 396
>ref|NM_106134.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
zinc ion binding AT1G74760 mRNA, complete cds
Length = 768
Score = 66.1 bits (138), Expect(7) = 1e-049
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +2 / +1
Query: 536 HQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEE 661
H C E + NCPIC+EY+F S + L CGH MH TCF+E
Sbjct: 412 HVCREKCLEDNCPICHEYIFTSSSPVKALPCGHLMHSTCFQE 537
Score = 60.2 bits (125), Expect(7) = 1e-049
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2 / +1
Query: 149 RDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNE 256
RD + GC HY+R CK++APCC+++F C CH+E
Sbjct: 34 RDPHSLIFGCNHYKRNCKLLAPCCDKLFTCIRCHDE 141
Score = 45.5 bits (93), Expect(7) = 1e-049
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / +1
Query: 794 VLCNDCNKVSEVNFHVIGHKCSHCRSYNTR 883
+LCNDC + +H + HKC+ C SYN+R
Sbjct: 670 ILCNDCGRKGNAPYHWLYHKCTTCGSYNSR 759
Score = 40.5 bits (82), Expect(7) = 1e-049
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 359 SCGVNMGEYFCDICKFYDDD 418
SC +MG+YFC ICK YDD+
Sbjct: 238 SCKSSMGKYFCKICKLYDDE 297
Score = 38.6 bits (78), Expect(7) = 1e-049
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2 / +1
Query: 680 YTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKIWVL 799
YTCP+CSK+ D+ +++MLD + MP Y K V+
Sbjct: 553 YTCPVCSKSLGDMQVYFKMLDALLAEEKMPDEYSNKTQVI 672
Score = 29.0 bits (57), Expect(7) = 1e-049
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +1
Query: 416 DTDKGQYHCIDCGICRVG 469
D ++ YHC C +CRVG
Sbjct: 289 DDERKIYHCPYCNLCRVG 342
Score = 28.1 bits (55), Expect(7) = 1e-049
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 479 NFFHCVKCGSCYS 517
++FHC+KC +C S
Sbjct: 358 DYFHCMKCNACMS 396
>gb|AY094471.1| Arabidopsis thaliana AT3g18290/MIE15_8 mRNA, complete cds
Length = 4229
Score = 69.3 bits (145), Expect(7) = 6e-049
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +2 / +2
Query: 533 NHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFE 658
NH+C+E S+ NCPIC E+LF S + R L CGH MH CF+
Sbjct: 3680 NHKCLEKSLETNCPICCEFLFTSSEAVRALPCGHYMHSACFQ 3805
Score = 63.4 bits (132), Expect(7) = 6e-049
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2 / +2
Query: 149 RDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEAT 262
RD K +GCEHY+R CK+ A CC+Q+F CR CH++ +
Sbjct: 3302 RDPEKQIYGCEHYKRNCKLRAACCDQLFTCRFCHDKVS 3415
Score = 49.2 bits (101), Expect(7) = 6e-049
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 794 VLCNDCNKVSEVNFHVIGHKCSHCRSYNTR 883
+LCNDC + FH + HKC C SYNTR
Sbjct: 3941 ILCNDCERKGTTRFHWLYHKCGSCGSYNTR 4030
Score = 36.3 bits (73), Expect(7) = 6e-049
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2 / +2
Query: 680 YTCPICSKTALDLTHHWEMLDQEIEATIMPLVYR 781
YTCPIC K+ D+ ++ MLD + A +P Y+
Sbjct: 3824 YTCPICGKSLGDMAVYFGMLDALLAAEELPEEYK 3925
Score = 32.2 bits (64), Expect(7) = 6e-049
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2 / +2
Query: 314 CLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDD 418
CL + P+ G M +++C ICK +DD+
Sbjct: 3464 CLKVQPVGPICTTPSCDGFPMAKHYCSICKLFDDE 3568
Score = 30.4 bits (60), Expect(7) = 6e-049
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +2
Query: 416 DTDKGQYHCIDCGICRVG 469
D ++ YHC C +CRVG
Sbjct: 3560 DDERAVYHCPFCNLCRVG 3613
Score = 24.9 bits (48), Expect(7) = 6e-049
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2 / +2
Query: 479 NFFHCVKCGSCYSVIL 526
+FFHC+ C C + L
Sbjct: 3629 DFFHCMTCNCCLGMKL 3676
>ref|NM_112713.2| Arabidopsis thaliana EMB2454; protein binding / ubiquitin-protein
ligase/ zinc ion binding AT3G18290 (EMB2454) mRNA,
complete cds
Length = 4229
Score = 69.3 bits (145), Expect(7) = 6e-049
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +2 / +2
Query: 533 NHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFE 658
NH+C+E S+ NCPIC E+LF S + R L CGH MH CF+
Sbjct: 3680 NHKCLEKSLETNCPICCEFLFTSSEAVRALPCGHYMHSACFQ 3805
Score = 63.4 bits (132), Expect(7) = 6e-049
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2 / +2
Query: 149 RDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEAT 262
RD K +GCEHY+R CK+ A CC+Q+F CR CH++ +
Sbjct: 3302 RDPEKQIYGCEHYKRNCKLRAACCDQLFTCRFCHDKVS 3415
Score = 49.2 bits (101), Expect(7) = 6e-049
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 794 VLCNDCNKVSEVNFHVIGHKCSHCRSYNTR 883
+LCNDC + FH + HKC C SYNTR
Sbjct: 3941 ILCNDCERKGTTRFHWLYHKCGSCGSYNTR 4030
Score = 36.3 bits (73), Expect(7) = 6e-049
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2 / +2
Query: 680 YTCPICSKTALDLTHHWEMLDQEIEATIMPLVYR 781
YTCPIC K+ D+ ++ MLD + A +P Y+
Sbjct: 3824 YTCPICGKSLGDMAVYFGMLDALLAAEELPEEYK 3925
Score = 32.2 bits (64), Expect(7) = 6e-049
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2 / +2
Query: 314 CLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDD 418
CL + P+ G M +++C ICK +DD+
Sbjct: 3464 CLKVQPVGPICTTPSCDGFPMAKHYCSICKLFDDE 3568
Score = 30.4 bits (60), Expect(7) = 6e-049
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +2
Query: 416 DTDKGQYHCIDCGICRVG 469
D ++ YHC C +CRVG
Sbjct: 3560 DDERAVYHCPFCNLCRVG 3613
Score = 24.9 bits (48), Expect(7) = 6e-049
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2 / +2
Query: 479 NFFHCVKCGSCYSVIL 526
+FFHC+ C C + L
Sbjct: 3629 DFFHCMTCNCCLGMKL 3676
>gb|BT005819.1| Arabidopsis thaliana At3g18290/MIE15_8 gene, complete cds
Length = 3765
Score = 69.3 bits (145), Expect(7) = 6e-049
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +2 / +1
Query: 533 NHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFE 658
NH+C+E S+ NCPIC E+LF S + R L CGH MH CF+
Sbjct: 3367 NHKCLEKSLETNCPICCEFLFTSSEAVRALPCGHYMHSACFQ 3492
Score = 63.4 bits (132), Expect(7) = 6e-049
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2 / +1
Query: 149 RDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEAT 262
RD K +GCEHY+R CK+ A CC+Q+F CR CH++ +
Sbjct: 2989 RDPEKQIYGCEHYKRNCKLRAACCDQLFTCRFCHDKVS 3102
Score = 49.2 bits (101), Expect(7) = 6e-049
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 794 VLCNDCNKVSEVNFHVIGHKCSHCRSYNTR 883
+LCNDC + FH + HKC C SYNTR
Sbjct: 3628 ILCNDCERKGTTRFHWLYHKCGSCGSYNTR 3717
Score = 36.3 bits (73), Expect(7) = 6e-049
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2 / +1
Query: 680 YTCPICSKTALDLTHHWEMLDQEIEATIMPLVYR 781
YTCPIC K+ D+ ++ MLD + A +P Y+
Sbjct: 3511 YTCPICGKSLGDMAVYFGMLDALLAAEELPEEYK 3612
Score = 32.2 bits (64), Expect(7) = 6e-049
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2 / +1
Query: 314 CLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDD 418
CL + P+ G M +++C ICK +DD+
Sbjct: 3151 CLKVQPVGPICTTPSCDGFPMAKHYCSICKLFDDE 3255
Score = 30.4 bits (60), Expect(7) = 6e-049
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +1
Query: 416 DTDKGQYHCIDCGICRVG 469
D ++ YHC C +CRVG
Sbjct: 3247 DDERAVYHCPFCNLCRVG 3300
Score = 24.9 bits (48), Expect(7) = 6e-049
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2 / +1
Query: 479 NFFHCVKCGSCYSVIL 526
+FFHC+ C C + L
Sbjct: 3316 DFFHCMTCNCCLGMKL 3363
>gb|Z37684.1|Z37684 ATTS4149 Versailles-VB Arabidopsis thaliana cDNA clone VBVJH04,
mRNA sequence
Length = 405
Score = 122 bits (260), Expect(4) = 1e-048
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2 / +3
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
DRH + RQDV++V+C +C+T+QP +QVC +CGVNMGEYFC IC FYDDDT+K Q+HC DC
Sbjct: 126 DRHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDC 305
Query: 452 G 454
G
Sbjct: 306 G 308
Score = 50.6 bits (104), Expect(4) = 1e-048
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +2 / +1
Query: 158 GKMKHGCEHYRRRCKIVAPCCNQ 226
GKM GC+HY+RRC+I APCCN+
Sbjct: 1 GKMGFGCKHYKRRCQIRAPCCNE 69
Score = 48.7 bits (100), Expect(4) = 1e-048
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2 / +1
Query: 452 GICRVGGKENFFHCVKCG 505
GICRVGG+ENFFHC KCG
Sbjct: 307 GICRVGGRENFFHCKKCG 360
Score = 31.8 bits (63), Expect(4) = 1e-048
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2 / +3
Query: 230 FPCRHCHNEATAS 268
F CRHCHNE+T++
Sbjct: 72 FDCRHCHNESTST 110
>gb|AV543982.1|AV543982 AV543982 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ29g11F 3', mRNA sequence
Length = 643
Score = 132 bits (282), Expect(2) = 5e-047
Identities = 46/78 (58%), Positives = 61/78 (78%)
Frame = +2 / -3
Query: 554 SMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWE 733
SMR +CPICYEYLFDSL+ T V+ CGHTMH+ C+ EM+ +K+ CPICS++ +D++ W+
Sbjct: 641 SMRHHCPICYEYLFDSLKDTNVMKCGHTMHVECYNEMIKRDKFCCPICSRSVIDMSKTWQ 462
Query: 734 MLDQEIEATIMPLVYRYK 787
LD+EIEAT MP YR K
Sbjct: 461 RLDEEIEATAMPSDYRDK 408
Score = 79.4 bits (167), Expect(2) = 5e-047
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +2 / -3
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
K+W+LCNDCN +EV+FH+IG KC HCRSYNTR + P
Sbjct: 407 KVWILCNDCNDTTEVHFHIIGQKCGHCRSYNTRAIAPP 294
>gb|CF651318.1|CF651318 30-E9213-013-001-K07-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770K071Q 5-PRIME, mRNA sequence
Length = 477
Score = 164 bits (353), Expect(2) = 1e-046
Identities = 57/108 (52%), Positives = 76/108 (70%)
Frame = +2 / +1
Query: 467 GGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHL 646
GG+ENFFHC KCG CYS++L++ H CVE +M +CPIC+E+LF+S VL CGHT+H
Sbjct: 1 GGRENFFHCYKCGCCYSILLKNGHPCVEGAMHHDCPICFEFLFESRNDVTVLPCGHTIHQ 180
Query: 647 TCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
C EEM H +Y CP+CSK+ D++ WE D EI AT MP Y+ ++
Sbjct: 181 KCLEEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNRM 324
Score = 46.0 bits (94), Expect(2) = 1e-046
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCR 868
+ +LCNDC K +EV +HV+ KC +C+
Sbjct: 325 VQILCNDCGKKAEVQYHVVAQKCPNCK 405
>gb|BP823729.1|BP823729 BP823729 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-07-F23 5',
mRNA sequence
Length = 392
Score = 128 bits (275), Expect(2) = 1e-046
Identities = 44/66 (66%), Positives = 57/66 (86%)
Frame = +2 / +3
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDC 451
+RH + RQ+V++VVC +C+T+Q V++VC +CGVNMGEYFCDICKF+DDD K Q+HC DC
Sbjct: 195 ERHDLVRQNVKQVVCSICQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHCDDC 374
Query: 452 GICRVG 469
GICRVG
Sbjct: 375 GICRVG 392
Score = 81.3 bits (171), Expect(2) = 1e-046
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +2 / +3
Query: 149 RDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
+D GK + GCEHY+RRCKI APCCN +F CRHCHN++ S
Sbjct: 60 KDFGKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHNDSANS 179
>gb|CF774264.1|CF774264 AG_FSL_30B06 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 30B06, mRNA sequence
Length = 399
Score = 182 bits (391), Expect = 3e-044
Identities = 63/118 (53%), Positives = 83/118 (70%)
Frame = +2 / +3
Query: 437 HCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTR 616
HC CGICR+GG+ENFFHC KCG CYS++L++ H CVE +M + PIC+E+LF+S
Sbjct: 3 HCDGCGICRIGGRENFFHCYKCGCCYSILLKNGHPCVEGAMHHDWPICFEFLFESRNDVT 182
Query: 617 VLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
VL CGHT+H C EEM H +Y CP+CSK+ D++ WE D EI AT MP Y+ ++
Sbjct: 183 VLPCGHTIHQKCLEEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNRM 356
>gb|CF651317.1|CF651317 30-E021110-013-001-K07-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770K071Q 5-PRIME, mRNA sequence
Length = 716
Score = 131 bits (281), Expect(3) = 4e-044
Identities = 46/94 (48%), Positives = 64/94 (68%)
Frame = +2 / +3
Query: 509 CYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTC 688
CYS++L++ H CVE +M +CPIC+E+LF+S VL CGHT+H C EEM H +Y C
Sbjct: 45 CYSILLKNGHPCVEGAMHHDCPICFEFLFESRNDVTVLPCGHTIHQKCLEEMRDHYQYAC 224
Query: 689 PICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
P+CSK+ D++ WE D EI AT MP Y+ ++
Sbjct: 225 PLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNRM 326
Score = 60.2 bits (125), Expect(3) = 4e-044
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2 / +3
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
+ +LCNDC K +EV +HV+ KC +C+SYNTR T
Sbjct: 327 VQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQT 428
Score = 28.6 bits (56), Expect(3) = 4e-044
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +2 / +1
Query: 467 GGKENFFHCVK 499
GG+ENFFHC++
Sbjct: 1 GGRENFFHCLQ 33
>gb|AC068602.2|AC068602 Genomic sequence for Arabidopsis thaliana BAC F14D16 from chromosome
I, complete sequence
Length = 87508
Score = 63.8 bits (133), Expect(7) = 5e-042
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +2 / -2
Query: 536 HQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFE 658
H C E + NCPIC+EY+F S + L CGH MH TCF+
Sbjct: 8295 HVCREKCLEDNCPICHEYIFTSNSPVKALPCGHVMHSTCFQ 8173
Score = 63.4 bits (132), Expect(7) = 5e-042
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +2 / -1
Query: 149 RDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNE 256
RD K+ GC+HY+R CK++APCCN+++ C CH+E
Sbjct: 8851 RDPHKLIFGCKHYKRSCKLLAPCCNKLYTCIRCHDE 8744
Score = 41.8 bits (85), Expect(7) = 5e-042
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2 / -2
Query: 356 ISCGVNMGEYFCDICKFYDDD 418
ISC +MG+Y+C ICK +DDD
Sbjct: 8565 ISCSSSMGKYYCKICKLFDDD 8503
Score = 30.4 bits (60), Expect(7) = 5e-042
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2 / -2
Query: 284 ICRQDVEKVVCLLCETKQPVSQVC 355
+CR+ + K++C+ C QPV C
Sbjct: 8643 LCRKQITKMMCMKCMIIQPVGASC 8572
Score = 28.6 bits (56), Expect(7) = 5e-042
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 479 NFFHCVKCGSCYSVIL 526
++FHC+KC +C S ++
Sbjct: 8349 DYFHCMKCNACMSRLI 8302
Score = 27.6 bits (54), Expect(7) = 5e-042
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / -2
Query: 680 YTCPICSKTALDL 718
YTCPICSK+ D+
Sbjct: 8058 YTCPICSKSLGDM 8020
Score = 25.8 bits (50), Expect(7) = 5e-042
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2 / -2
Query: 434 YHCIDCGICRVG 469
YHC C +CR+G
Sbjct: 8400 YHCPYCNLCRLG 8365
>gb|AV783078.1|AV783078 AV783078 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-05-C04 3',
mRNA sequence
Length = 706
Score = 131 bits (281), Expect(2) = 4e-041
Identities = 46/94 (48%), Positives = 64/94 (68%)
Frame = +2 / -1
Query: 509 CYSVILRDNHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTC 688
CYS++L++ H CVE +M +CPIC+E+LF+S VL CGHT+H C EEM H +Y C
Sbjct: 706 CYSILLKNGHPCVEGAMHHDCPICFEFLFESRNDVTVLPCGHTIHQKCLEEMRDHYQYAC 527
Query: 689 PICSKTALDLTHHWEMLDQEIEATIMPLVYRYKI 790
P+CSK+ D++ WE D EI AT MP Y+ ++
Sbjct: 526 PLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNRM 425
Score = 60.2 bits (125), Expect(2) = 4e-041
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2 / -1
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTT 889
+ +LCNDC K +EV +HV+ KC +C+SYNTR T
Sbjct: 424 VQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQT 323
>gb|AV826141.1|AV826141 AV826141 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-09-P06 5',
mRNA sequence
Length = 632
Score = 83.1 bits (175), Expect(3) = 5e-041
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +2 / +1
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDK 427
RH + R +V KV+C LCET+Q V Q C +CGV MG+YFC CKF+DDD K
Sbjct: 346 RHELPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSK 498
Score = 78.0 bits (164), Expect(3) = 5e-041
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2 / +1
Query: 152 DVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
++G +GC HYRRRCKI APCC+++F CRHCHNEA S
Sbjct: 208 EIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDS 324
Score = 48.7 bits (100), Expect(3) = 5e-041
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +2 / +2
Query: 431 QYHCIDCGICRVGGKENFFHCVKCGSCYSVILRDNHQCVENS 556
QYHC +CGICR + F K I+ D HQCVE +
Sbjct: 503 QYHCDECGICRTRRRRKLFXLQKMPMLLLQIMEDKHQCVEGA 628
>gb|BP798029.1|BP798029 BP798029 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-05-L17 5',
mRNA sequence
Length = 391
Score = 109 bits (232), Expect(2) = 8e-041
Identities = 37/59 (62%), Positives = 50/59 (84%)
Frame = +2 / +3
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCID 448
+RH + RQ+V++VVC +C+T+Q V++VC +CGVNMGEYFCDICKF+DDD K Q+HC D
Sbjct: 213 ERHDLVRQNVKQVVCSICQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHCDD 389
Score = 81.7 bits (172), Expect(2) = 8e-041
Identities = 30/65 (46%), Positives = 40/65 (61%)
Frame = +2 / +3
Query: 74 MGGAQFPGDNDVAEVDAARDGEVDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHN 253
+GG+ + + AA +D GK + GCEHY+RRCKI APCCN +F CRHCHN
Sbjct: 3 VGGSASLQSDSMEAAAAADSSIPRDKDFGKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHN 182
Query: 254 EATAS 268
++ S
Sbjct: 183 DSANS 197
>gb|AV560651.1|AV560651 AV560651 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ138c08F 3', mRNA sequence
Length = 594
Score = 115 bits (245), Expect(2) = 1e-039
Identities = 41/62 (66%), Positives = 47/62 (75%)
Frame = +2 / -3
Query: 275 RHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICKFYDDDTDKGQYHCIDCG 454
RH I R VE+V+CLLC T+Q V Q+CI CGV MG+YFC +CK YDDDT K QYHC CG
Sbjct: 187 RHDIPRHQVEQVICLLCGTEQEVGQICIHCGVCMGKYFCKVCKLYDDDTSKKQYHCDGCG 8
Query: 455 IC 460
IC
Sbjct: 7 IC 2
Score = 72.1 bits (151), Expect(2) = 1e-039
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2 / -3
Query: 152 DVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEA 259
D G M++GC HYRRRC I APCCN++F C HCH EA
Sbjct: 325 DRGLMEYGCPHYRRRCCIRAPCCNEIFGCHHCHYEA 218
>ref|NM_101748.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
zinc ion binding AT1G18910 mRNA, complete cds
Length = 588
Score = 66.1 bits (138), Expect(6) = 2e-038
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +2 / +1
Query: 536 HQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFEE 661
H C E + NCPIC+EY+F S + L CGH MH TCF+E
Sbjct: 232 HVCREKCLEDNCPICHEYIFTSNSPVKALPCGHVMHSTCFQE 357
Score = 49.6 bits (102), Expect(6) = 2e-038
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2 / +1
Query: 794 VLCNDCNKVSEVNFHVIGHKCSHCRSYNTR 883
+LCNDC + +H + HKCS C SYNTR
Sbjct: 490 ILCNDCGRKGNAPYHWLYHKCSSCASYNTR 579
Score = 42.3 bits (86), Expect(6) = 2e-038
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2 / +1
Query: 356 ISCGVNMGEYFCDICKFYDDDTD 424
ISC +MG+Y+C ICK +DDD +
Sbjct: 55 ISCSSSMGKYYCKICKLFDDDRE 123
Score = 36.3 bits (73), Expect(6) = 2e-038
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2 / +1
Query: 680 YTCPICSKTALDLTHHWEMLDQEIEATIMPLVY 778
YTCPICSK+ D+ ++ MLD + MP Y
Sbjct: 373 YTCPICSKSLGDMQVYFRMLDALLAEQKMPDEY 471
Score = 29.5 bits (58), Expect(6) = 2e-038
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +1
Query: 416 DTDKGQYHCIDCGICRVG 469
D D+ YHC C +CR+G
Sbjct: 109 DDDREIYHCPYCNLCRLG 162
Score = 28.6 bits (56), Expect(6) = 2e-038
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +2 / +1
Query: 479 NFFHCVKCGSCYSVIL 526
++FHC+KC +C S ++
Sbjct: 178 DYFHCMKCNACMSRLI 225
>gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F25A4 sequence, complete sequence
Length = 115721
Score = 63.8 bits (133), Expect(7) = 3e-037
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +2 / +2
Query: 536 HQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFE 658
H C E + NCPIC+EY+F S + L CGH MH TCF+
Sbjct: 84707 HVCREKCLEDNCPICHEYIFTSSSPVKALPCGHLMHSTCFQ 84829
Score = 60.2 bits (125), Expect(7) = 3e-037
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2 / +2
Query: 149 RDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNE 256
RD + GC HY+R CK++APCC+++F C CH+E
Sbjct: 84116 RDPHSLIFGCNHYKRNCKLLAPCCDKLFTCIRCHDE 84223
Score = 31.3 bits (62), Expect(7) = 3e-037
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +3
Query: 680 YTCPICSKTALDLTHHWEMLDQEI 751
YTCP+CSK+ D+ + +L Q I
Sbjct: 84951 YTCPVCSKSLGDMQVSYTILKQSI 85022
Score = 28.1 bits (55), Expect(7) = 3e-037
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 479 NFFHCVKCGSCYS 517
++FHC+KC +C S
Sbjct: 84653 DYFHCMKCNACMS 84691
Score = 28.1 bits (55), Expect(7) = 3e-037
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 287 CRQDVEKVVCLLCETKQPVSQVC 355
CR+ + K++C+ C QP+ C
Sbjct: 84331 CRKQITKMMCMKCLLIQPIGANC 84399
Score = 27.2 bits (53), Expect(7) = 3e-037
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2 / +2
Query: 434 YHCIDCGICRVG 469
YHC C +CRVG
Sbjct: 84602 YHCPYCNLCRVG 84637
Score = 26.3 bits (51), Expect(7) = 3e-037
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3 / +2
Query: 375 WESTFVIYANFMMMIQTKGSTIASIVA 455
WE+T YAN+M M S +S +A
Sbjct: 84425 WENTSAKYANYMTMKGNVSSPASSFLA 84505
>gb|AI998792.1|AI998792 701546931 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701546931, mRNA sequence
Length = 585
Score = 90.4 bits (191), Expect(2) = 2e-034
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = +2 / -1
Query: 611 TRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPLVYRYK 787
T V+ CGHTMH+ C+ EM+ +K CPICS++ +D++ W+ LD+EIEAT MP YR K
Sbjct: 582 TNVMKCGHTMHVECYNEMIKRDKICCPICSRSVIDMSKTWQRLDEEIEATAMPSDYRDK 406
Score = 79.4 bits (167), Expect(2) = 2e-034
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +2 / -1
Query: 785 KIWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSRP 898
K+W+LCNDCN +EV+FH+IG KC HCRSYNTR + P
Sbjct: 405 KVWILCNDCNDTTEVHFHIIGQKCGHCRSYNTRAIAPP 292
>gb|BP824281.1|BP824281 BP824281 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-09-B04 5',
mRNA sequence
Length = 403
Score = 84.5 bits (178), Expect(2) = 3e-033
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +2 / +1
Query: 143 DRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
DR GKM GC+HY+RRC+I APCCN+VF CRHCHNE+T++
Sbjct: 136 DRLHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTST 261
Score = 80.8 bits (170), Expect(2) = 3e-033
Identities = 27/42 (64%), Positives = 36/42 (85%)
Frame = +2 / +1
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDI 397
DRH + RQDV++V+C +C+T+QP +QVC +CGVNMGEYFC I
Sbjct: 277 DRHDLVRQDVKQVICSVCDTEQPAAQVCSNCGVNMGEYFCSI 402
>dbj|AP000414.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIE15
Length = 34067
Score = 69.3 bits (145), Expect(6) = 5e-033
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +2 / +2
Query: 533 NHQCVENSMRQNCPICYEYLFDSLQGTRVLNCGHTMHLTCFE 658
NH+C+E S+ NCPIC E+LF S + R L CGH MH CF+
Sbjct: 31688 NHKCLEKSLETNCPICCEFLFTSSEAVRALPCGHYMHSACFQ 31813
Score = 63.4 bits (132), Expect(6) = 5e-033
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2 / +1
Query: 149 RDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEAT 262
RD K +GCEHY+R CK+ A CC+Q+F CR CH++ +
Sbjct: 31093 RDPEKQIYGCEHYKRNCKLRAACCDQLFTCRFCHDKVS 31206
Score = 49.2 bits (101), Expect(6) = 5e-033
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 794 VLCNDCNKVSEVNFHVIGHKCSHCRSYNTR 883
+LCNDC + FH + HKC C SYNTR
Sbjct: 32219 ILCNDCERKGTTRFHWLYHKCGSCGSYNTR 32308
Score = 32.7 bits (65), Expect(6) = 5e-033
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3 / +2
Query: 360 AVESIWESTFVIYANFMMMIQTKGSTI 440
A +S W+ST ++ANF+MM + T+
Sbjct: 31412 ATDSQWQSTIAVFANFLMMKGKQNPTV 31492
Score = 27.2 bits (53), Expect(6) = 5e-033
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2 / +2
Query: 635 TMHLTCFEEMVAHNKYTCPICSKTALDL 718
T+ +T + + YTCPIC K+ D+
Sbjct: 31874 TLAVTLVFQAYTCSHYTCPICGKSLGDM 31957
Score = 27.2 bits (53), Expect(6) = 5e-033
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2 / +2
Query: 434 YHCIDCGICRVG 469
YHC C +CRVG
Sbjct: 31586 YHCPFCNLCRVG 31621
>dbj|AK220658.1| Arabidopsis thaliana mRNA for PGPD14 protein, complete cds, clone:
RAFL21-69-N21
Length = 493
Score = 93.6 bits (198), Expect(2) = 8e-032
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = +2 / +1
Query: 593 FDSLQGTRVLNCGHTMHLTCFEEMVAHNKYTCPICSKTALDLTHHWEMLDQEIEATIMPL 772
FDS + VL CGHTMHL C ++M HN+YTCP+CSK+ D+++ W+ LD+E+ A MP
Sbjct: 1 FDSTRDITVLRCGHTMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVAAYPMPK 180
Query: 773 VYRYKI 790
+Y K+
Sbjct: 181 MYENKM 198
Score = 67.0 bits (140), Expect(2) = 8e-032
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2 / +1
Query: 788 IWVLCNDCNKVSEVNFHVIGHKCSHCRSYNTRTTSR 895
+W+LCNDC + V FH+I HKCS C SYNTR T R
Sbjct: 199 VWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQTQR 306
>gb|BP833602.1|BP833602 BP833602 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-96-M12 5',
mRNA sequence
Length = 375
Score = 77.1 bits (162), Expect(3) = 5e-031
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = +2 / +2
Query: 92 PGDNDVAEVDAARDGEVDRRDVGKMKHGCEHYRRRCKIVAPCCNQVFPCRHCHNEATAS 268
P V AA +D GK + GCEH +RRCKI APCCN +F CRHCHN++ S
Sbjct: 5 PAQTRVEAAAAADSSIPRDKDFGKFQFGCEH*KRRCKIRAPCCNLIFSCRHCHNDSANS 181
Score = 72.1 bits (151), Expect(3) = 5e-031
Identities = 26/44 (59%), Positives = 37/44 (84%)
Frame = +2 / +2
Query: 272 DRHTICRQDVEKVVCLLCETKQPVSQVCISCGVNMGEYFCDICK 403
+RH + RQ+V++VV +C+T+Q V++VC +CGVNMGEYF DICK
Sbjct: 197 ERHDLVRQNVKQVVGSICQTEQEVAKVCSNCGVNMGEYFRDICK 328
Score = 26.7 bits (52), Expect(3) = 5e-031
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2 / +1
Query: 401 KFYDDDTDKGQYHCID 448
+ +DDD K Q+HC D
Sbjct: 325 QIFDDDISKEQFHCDD 372
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,174,919,227
Number of Sequences: 1013581
Number of extensions: 50897841
Number of successful extensions: 259449
Number of sequences better than 1.0e-020: 74
length of database: 302,980,290
effective HSP length: 58
effective length of database: 244,192,592
effective search space used: 102560888640
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)