TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440450.2.1
(1291 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DQ284987.1| Arabidopsis thaliana DNA replication protein... 100 4e-039
gb|BT005433.1| Arabidopsis thaliana clone U50553 putative r... 100 4e-039
emb|BX820518.1|CNS0A84V Arabidopsis thaliana Full-length cD... 100 7e-039
gb|AY088525.1| Arabidopsis thaliana clone 7536 mRNA, comple... 100 8e-039
dbj|AK117537.1| Arabidopsis thaliana At2g24490 mRNA for put... 100 8e-039
ref|NM_128010.2| Arabidopsis thaliana nucleic acid binding ... 100 8e-039
dbj|AK117794.1| Arabidopsis thaliana At3g02920 mRNA for put... 112 3e-031
gb|AY084806.1| Arabidopsis thaliana clone 118359 mRNA, comp... 112 3e-031
ref|NM_111162.2| Arabidopsis thaliana nucleic acid binding ... 112 3e-031
gb|AU238378.1|AU238378 AU238378 RAFL17 Arabidopsis thaliana... 100 4e-030
gb|AU238647.1|AU238647 AU238647 RAFL17 Arabidopsis thaliana... 112 2e-027
>gb|DQ284987.1| Arabidopsis thaliana DNA replication protein A2 subunit (ROR1)
mRNA, complete cds
Length = 840
Score = 100 bits (213), Expect(3) = 4e-039
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = -2 / +1
Query: 906 RVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAV 727
+VT+V FTLDDGTG+ID RW +E DA+EM + YV + G LK FQGK ++ ++V
Sbjct: 256 KVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVRDGTYVRLSGHLKTFQGKTQLLVFSV 435
Query: 726 RRVTNFNEITCHFLHCIQVHME 661
R + +FNE+T H++ CI + +
Sbjct: 436 RPIMDFNEVTFHYIECIHFYSQ 501
Score = 54.2 bits (112), Expect(3) = 4e-039
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = -2 / +1
Query: 1089 STVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKV 910
S +S +K R Q L+P+TVKQ + Q+SG++S ING+ ++ + LVG + K
Sbjct: 70 SQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEKSGLVINGISLTNVSLVGLVCDKD 249
Query: 909 E 907
E
Sbjct: 250 E 252
Score = 53.8 bits (111), Expect(3) = 4e-039
Identities = 18/62 (29%), Positives = 37/62 (59%)
Frame = -2 / +1
Query: 567 ISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYK 388
+ +++L P+ ++ G+HI ++ +LK+P + + +Q G IY+TID++H+K
Sbjct: 646 LDDMILDYLKQPACTARQQGIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 825
Query: 387 SV 382
V
Sbjct: 826 HV 831
>gb|BT005433.1| Arabidopsis thaliana clone U50553 putative replication protein A1
(At2g24490) mRNA, complete cds
Length = 871
Score = 100 bits (213), Expect(3) = 4e-039
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = -2 / +1
Query: 906 RVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAV 727
+VT+V FTLDDGTG+ID RW +E DA+EM + YV + G LK FQGK ++ ++V
Sbjct: 256 KVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVRDGTYVRLSGHLKTFQGKTQLLVFSV 435
Query: 726 RRVTNFNEITCHFLHCIQVHME 661
R + +FNE+T H++ CI + +
Sbjct: 436 RPIMDFNEVTFHYIECIHFYSQ 501
Score = 54.2 bits (112), Expect(3) = 4e-039
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = -2 / +1
Query: 1089 STVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKV 910
S +S +K R Q L+P+TVKQ + Q+SG++S ING+ ++ + LVG + K
Sbjct: 70 SQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEKSGLVINGISLTNVSLVGLVCDKD 249
Query: 909 E 907
E
Sbjct: 250 E 252
Score = 53.8 bits (111), Expect(3) = 4e-039
Identities = 18/62 (29%), Positives = 37/62 (59%)
Frame = -2 / +1
Query: 567 ISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYK 388
+ +++L P+ ++ G+HI ++ +LK+P + + +Q G IY+TID++H+K
Sbjct: 646 LDDMILDYLKQPACTARQQGIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 825
Query: 387 SV 382
V
Sbjct: 826 HV 831
>emb|BX820518.1|CNS0A84V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH43ZD06 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1113
Score = 100 bits (213), Expect(3) = 7e-039
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = -2 / +2
Query: 906 RVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAV 727
+VT+V FTLDDGTG+ID RW +E DA+EM + YV + G LK FQGK ++ ++V
Sbjct: 317 KVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVRDGTYVRLSGHLKTFQGKTQLLVFSV 496
Query: 726 RRVTNFNEITCHFLHCIQVHME 661
R + +FNE+T H++ CI + +
Sbjct: 497 RPIMDFNEVTFHYIECIHFYSQ 562
Score = 54.2 bits (112), Expect(3) = 7e-039
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = -2 / +2
Query: 1089 STVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKV 910
S +S +K R Q L+P+TVKQ + Q+SG++S ING+ ++ + LVG + K
Sbjct: 131 SQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEKSGLVINGISLTNVSLVGLVCDKD 310
Query: 909 E 907
E
Sbjct: 311 E 313
Score = 53.8 bits (111), Expect(3) = 7e-039
Identities = 18/62 (29%), Positives = 37/62 (59%)
Frame = -2 / +2
Query: 567 ISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYK 388
+ +++L P+ ++ G+HI ++ +LK+P + + +Q G IY+TID++H+K
Sbjct: 707 LDDMILDYLKQPACTARQQGIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 886
Query: 387 SV 382
V
Sbjct: 887 HV 892
>gb|AY088525.1| Arabidopsis thaliana clone 7536 mRNA, complete sequence
Length = 1154
Score = 100 bits (213), Expect(3) = 8e-039
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = -2 / +1
Query: 906 RVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAV 727
+VT+V FTLDDGTG+ID RW +E DA+EM + YV + G LK FQGK ++ ++V
Sbjct: 328 KVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVRDGTYVRLSGHLKTFQGKTQLLVFSV 507
Query: 726 RRVTNFNEITCHFLHCIQVHME 661
R + +FNE+T H++ CI + +
Sbjct: 508 RPIMDFNEVTFHYIECIHFYSQ 573
Score = 54.2 bits (112), Expect(3) = 8e-039
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = -2 / +1
Query: 1089 STVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKV 910
S +S +K R Q L+P+TVKQ + Q+SG++S ING+ ++ + LVG + K
Sbjct: 142 SQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEKSGLVINGISLTNVSLVGLVCDKD 321
Query: 909 E 907
E
Sbjct: 322 E 324
Score = 53.8 bits (111), Expect(3) = 8e-039
Identities = 18/62 (29%), Positives = 37/62 (59%)
Frame = -2 / +1
Query: 567 ISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYK 388
+ +++L P+ ++ G+HI ++ +LK+P + + +Q G IY+TID++H+K
Sbjct: 718 LDDMILDYLKQPACTARQQGIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 897
Query: 387 SV 382
V
Sbjct: 898 HV 903
>dbj|AK117537.1| Arabidopsis thaliana At2g24490 mRNA for putative replication
protein A1, complete cds, clone: RAFL17-19-E13
Length = 1159
Score = 100 bits (213), Expect(3) = 8e-039
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = -2 / +1
Query: 906 RVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAV 727
+VT+V FTLDDGTG+ID RW +E DA+EM + YV + G LK FQGK ++ ++V
Sbjct: 328 KVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVRDGTYVRLSGHLKTFQGKTQLLVFSV 507
Query: 726 RRVTNFNEITCHFLHCIQVHME 661
R + +FNE+T H++ CI + +
Sbjct: 508 RPIMDFNEVTFHYIECIHFYSQ 573
Score = 54.2 bits (112), Expect(3) = 8e-039
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = -2 / +1
Query: 1089 STVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKV 910
S +S +K R Q L+P+TVKQ + Q+SG++S ING+ ++ + LVG + K
Sbjct: 142 SQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEKSGLVINGISLTNVSLVGLVCDKD 321
Query: 909 E 907
E
Sbjct: 322 E 324
Score = 53.8 bits (111), Expect(3) = 8e-039
Identities = 18/62 (29%), Positives = 37/62 (59%)
Frame = -2 / +1
Query: 567 ISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYK 388
+ +++L P+ ++ G+HI ++ +LK+P + + +Q G IY+TID++H+K
Sbjct: 718 LDDMILDYLKQPACTARQQGIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 897
Query: 387 SV 382
V
Sbjct: 898 HV 903
>ref|NM_128010.2| Arabidopsis thaliana nucleic acid binding AT2G24490 mRNA, complete
cds
Length = 1159
Score = 100 bits (213), Expect(3) = 8e-039
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = -2 / +1
Query: 906 RVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAV 727
+VT+V FTLDDGTG+ID RW +E DA+EM + YV + G LK FQGK ++ ++V
Sbjct: 328 KVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVRDGTYVRLSGHLKTFQGKTQLLVFSV 507
Query: 726 RRVTNFNEITCHFLHCIQVHME 661
R + +FNE+T H++ CI + +
Sbjct: 508 RPIMDFNEVTFHYIECIHFYSQ 573
Score = 54.2 bits (112), Expect(3) = 8e-039
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = -2 / +1
Query: 1089 STVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKV 910
S +S +K R Q L+P+TVKQ + Q+SG++S ING+ ++ + LVG + K
Sbjct: 142 SQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEKSGLVINGISLTNVSLVGLVCDKD 321
Query: 909 E 907
E
Sbjct: 322 E 324
Score = 53.8 bits (111), Expect(3) = 8e-039
Identities = 18/62 (29%), Positives = 37/62 (59%)
Frame = -2 / +1
Query: 567 ISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYK 388
+ +++L P+ ++ G+HI ++ +LK+P + + +Q G IY+TID++H+K
Sbjct: 718 LDDMILDYLKQPACTARQQGIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 897
Query: 387 SV 382
V
Sbjct: 898 HV 903
>dbj|AK117794.1| Arabidopsis thaliana At3g02920 mRNA for putative replication factor
A, complete cds, clone: RAFL17-48-I03
Length = 1064
Score = 112 bits (239), Expect(3) = 3e-031
Identities = 49/105 (46%), Positives = 67/105 (63%)
Frame = -2 / +1
Query: 978 SNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANN 799
SNF+I+GV++ T+ +VGR+ R+T V F +DDGTG +D RW + + +EM
Sbjct: 229 SNFSIDGVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKL 408
Query: 798 ENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHM 664
YV + G LK FQGKR V ++VR VT+FNEI HF C+ VHM
Sbjct: 409 GMYVRLHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHM 543
Score = 37.3 bits (75), Expect(3) = 3e-031
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = -2 / +1
Query: 567 ISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYK 388
+ VL+ + P + E G+H + L++P V A++ + G IY+T+D+ +K
Sbjct: 697 VKQTVLNYLNQPMHIVSEAGVHCDIIARELRIPLLQVKEALEQLSNDGCIYSTLDETCFK 876
Query: 387 SVRNG* 370
S N *
Sbjct: 877 STANA* 894
Score = 33.1 bits (66), Expect(3) = 3e-031
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2 / +1
Query: 1089 STVVPENSGLSKGRSAQTLLPLTVKQTMDAAQT 991
+T E+S K R +TLLPLT+KQ A+ T
Sbjct: 124 TTQAHESSSSLKNRDVRTLLPLTLKQLSSASTT 222
>gb|AY084806.1| Arabidopsis thaliana clone 118359 mRNA, complete sequence
Length = 1168
Score = 112 bits (239), Expect(3) = 3e-031
Identities = 49/105 (46%), Positives = 67/105 (63%)
Frame = -2 / +3
Query: 978 SNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANN 799
SNF+I+GV++ T+ +VGR+ R+T V F +DDGTG +D RW + + +EM
Sbjct: 333 SNFSIDGVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKL 512
Query: 798 ENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHM 664
YV + G LK FQGKR V ++VR VT+FNEI HF C+ VHM
Sbjct: 513 GMYVRLHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHM 647
Score = 37.3 bits (75), Expect(3) = 3e-031
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = -2 / +3
Query: 567 ISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYK 388
+ VL+ + P + E G+H + L++P V A++ + G IY+T+D+ +K
Sbjct: 801 VKQTVLNYLNQPMHIVSEAGVHCDIIARELRIPLLQVKEALEQLSNDGCIYSTLDETCFK 980
Query: 387 SVRNG* 370
S N *
Sbjct: 981 STANA* 998
Score = 33.1 bits (66), Expect(3) = 3e-031
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2 / +3
Query: 1089 STVVPENSGLSKGRSAQTLLPLTVKQTMDAAQT 991
+T E+S K R +TLLPLT+KQ A+ T
Sbjct: 228 TTQAHESSSSLKNRDVRTLLPLTLKQLSSASTT 326
>ref|NM_111162.2| Arabidopsis thaliana nucleic acid binding AT3G02920 mRNA, complete
cds
Length = 1169
Score = 112 bits (239), Expect(3) = 3e-031
Identities = 49/105 (46%), Positives = 67/105 (63%)
Frame = -2 / +3
Query: 978 SNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANN 799
SNF+I+GV++ T+ +VGR+ R+T V F +DDGTG +D RW + + +EM
Sbjct: 333 SNFSIDGVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKL 512
Query: 798 ENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHM 664
YV + G LK FQGKR V ++VR VT+FNEI HF C+ VHM
Sbjct: 513 GMYVRLHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHM 647
Score = 37.3 bits (75), Expect(3) = 3e-031
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = -2 / +3
Query: 567 ISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYK 388
+ VL+ + P + E G+H + L++P V A++ + G IY+T+D+ +K
Sbjct: 801 VKQTVLNYLNQPMHIVSEAGVHCDIIARELRIPLLQVKEALEQLSNDGCIYSTLDETCFK 980
Query: 387 SVRNG* 370
S N *
Sbjct: 981 STANA* 998
Score = 33.1 bits (66), Expect(3) = 3e-031
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2 / +3
Query: 1089 STVVPENSGLSKGRSAQTLLPLTVKQTMDAAQT 991
+T E+S K R +TLLPLT+KQ A+ T
Sbjct: 228 TTQAHESSSSLKNRDVRTLLPLTLKQLSSASTT 326
>gb|AU238378.1|AU238378 AU238378 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-19-E13 5',
mRNA sequence
Length = 643
Score = 100 bits (213), Expect(2) = 4e-030
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = -2 / +2
Query: 906 RVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAV 727
+VT+V FTLDDGTG+ID RW +E DA+EM + YV + G LK FQGK ++ ++V
Sbjct: 329 KVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVRDGTYVRLSGHLKTFQGKTQLLVFSV 508
Query: 726 RRVTNFNEITCHFLHCIQVHME 661
R + +FNE+T H++ CI + +
Sbjct: 509 RPIMDFNEVTFHYIECIHFYSQ 574
Score = 54.2 bits (112), Expect(2) = 4e-030
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = -2 / +2
Query: 1089 STVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKV 910
S +S +K R Q L+P+TVKQ + Q+SG++S ING+ ++ + LVG + K
Sbjct: 143 SQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEKSGLVINGISLTNVSLVGLVCDKD 322
Query: 909 E 907
E
Sbjct: 323 E 325
>gb|AU238647.1|AU238647 AU238647 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-48-I03 5',
mRNA sequence
Length = 620
Score = 112 bits (239), Expect(2) = 2e-027
Identities = 49/105 (46%), Positives = 67/105 (63%)
Frame = -2 / +2
Query: 978 SNFAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANN 799
SNF+I+GV++ T+ +VGR+ R+T V F +DDGTG +D RW + + +EM
Sbjct: 230 SNFSIDGVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKL 409
Query: 798 ENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHM 664
YV + G LK FQGKR V ++VR VT+FNEI HF C+ VHM
Sbjct: 410 GMYVRLHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHM 544
Score = 33.1 bits (66), Expect(2) = 2e-027
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2 / +2
Query: 1089 STVVPENSGLSKGRSAQTLLPLTVKQTMDAAQT 991
+T E+S K R +TLLPLT+KQ A+ T
Sbjct: 125 TTQAHESSSSLKNRDVRTLLPLTLKQLSSASTT 223
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,286,450,304
Number of Sequences: 1013581
Number of extensions: 30591333
Number of successful extensions: 146547
Number of sequences better than 1.0e-020: 13
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 91216696356
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)