TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437739.2.1
(574 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV783076.1|AV783076 AV783076 RAFL5 Arabidopsis thaliana ... 199 8e-050
gb|AV784514.1|AV784514 AV784514 RAFL5 Arabidopsis thaliana ... 199 8e-050
gb|BU636687.1|BU636687 010C07 Infected Arabidopsis Leaf Ara... 199 8e-050
gb|AV543737.1|AV543737 AV543737 Arabidopsis thaliana roots ... 199 8e-050
gb|CK121760.1|CK121760 201b14.p1 AtM1 Arabidopsis thaliana ... 199 8e-050
gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 199 8e-050
gb|AF462808.1|AF462808 Arabidopsis thaliana beta-D-glucan e... 199 8e-050
gb|AY091027.1| Arabidopsis thaliana putative beta-D-glucan ... 199 8e-050
gb|AY142679.1| Arabidopsis thaliana putative beta-D-glucan ... 199 8e-050
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 199 8e-050
ref|NM_180717.1| Arabidopsis thaliana hydrolase, hydrolyzin... 199 8e-050
ref|NM_122104.3| Arabidopsis thaliana hydrolase, hydrolyzin... 199 8e-050
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 199 8e-050
dbj|AK221104.1| Arabidopsis thaliana mRNA for beta-D-glucan... 178 1e-043
gb|AY092999.1| Arabidopsis thaliana beta-glucosidase-like p... 136 3e-043
ref|NM_122103.3| Arabidopsis thaliana hydrolase, hydrolyzin... 136 3e-043
gb|AV784755.1|AV784755 AV784755 RAFL6 Arabidopsis thaliana ... 136 3e-043
gb|BP831413.1|BP831413 BP831413 RAFL19 Arabidopsis thaliana... 175 1e-042
dbj|AB008271.1| Arabidopsis thaliana genomic DNA, chromosom... 172 8e-042
dbj|AK118082.1| Arabidopsis thaliana At5g04885 mRNA for unk... 172 8e-042
ref|NM_147836.2| Arabidopsis thaliana hydrolase, hydrolyzin... 172 8e-042
gb|AV798147.1|AV798147 AV798147 RAFL9 Arabidopsis thaliana ... 167 2e-040
gb|BP814948.1|BP814948 BP814948 RAFL19 Arabidopsis thaliana... 148 1e-038
gb|BP596364.1|BP596364 BP596364 RAFL15 Arabidopsis thaliana... 160 2e-038
gb|BP586699.1|BP586699 BP586699 RAFL15 Arabidopsis thaliana... 160 4e-038
gb|AQ968670.1|AQ968670 LERJE11TR LERG Arabidopsis thaliana ... 159 8e-038
gb|BP641347.1|BP641347 BP641347 RAFL19 Arabidopsis thaliana... 158 1e-037
gb|BP786546.1|BP786546 BP786546 RAFL7 Arabidopsis thaliana ... 158 2e-037
gb|BP601838.1|BP601838 BP601838 RAFL16 Arabidopsis thaliana... 157 2e-037
gb|BP583906.1|BP583906 BP583906 RAFL14 Arabidopsis thaliana... 118 2e-037
gb|AV799272.1|AV799272 AV799272 RAFL9 Arabidopsis thaliana ... 153 5e-036
emb|BX833843.1|CNS09Z59 Arabidopsis thaliana Full-length cD... 152 7e-036
gb|AV794844.1|AV794844 AV794844 RAFL8 Arabidopsis thaliana ... 128 1e-035
emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome ... 146 1e-035
ref|NM_116136.2| Arabidopsis thaliana hydrolase, hydrolyzin... 146 1e-035
gb|AY062656.1| Arabidopsis thaliana beta-D-glucan exohydrol... 146 1e-035
gb|AY093309.1| Arabidopsis thaliana beta-D-glucan exohydrol... 146 1e-035
gb|BP789170.1|BP789170 BP789170 RAFL7 Arabidopsis thaliana ... 146 1e-035
gb|AV792692.1|AV792692 AV792692 RAFL7 Arabidopsis thaliana ... 145 2e-035
emb|AL773133.1| Arabidopsis thaliana transposon insertion S... 146 4e-035
emb|AL831381.1| Arabidopsis thaliana transposon insertion S... 146 5e-035
gb|AV816720.1|AV816720 AV816720 RAFL9 Arabidopsis thaliana ... 149 9e-035
gb|BP784023.1|BP784023 BP784023 RAFL7 Arabidopsis thaliana ... 148 2e-034
gb|BP836524.1|BP836524 BP836524 RAFL19 Arabidopsis thaliana... 101 2e-034
gb|BP588500.1|BP588500 BP588500 RAFL15 Arabidopsis thaliana... 147 2e-034
gb|CL497905.1|CL497905 SAIL_649_E01.v1 SAIL Collection Arab... 116 3e-034
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 146 6e-034
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 146 6e-034
gb|AV805245.1|AV805245 AV805245 RAFL9 Arabidopsis thaliana ... 138 2e-031
gb|BP595889.1|BP595889 BP595889 RAFL15 Arabidopsis thaliana... 75 2e-031
gb|BP579031.1|BP579031 BP579031 RAFL14 Arabidopsis thaliana... 135 1e-030
gb|BP619341.1|BP619341 BP619341 RAFL16 Arabidopsis thaliana... 113 1e-029
emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome... 113 1e-029
ref|NM_114568.3| Arabidopsis thaliana hydrolase, hydrolyzin... 113 1e-029
gb|BT022037.1| Arabidopsis thaliana At3g47010 gene, complet... 113 1e-029
emb|BX823971.1|CNS0A6XU Arabidopsis thaliana Full-length cD... 113 1e-029
gb|CW795440.1|CW795440 WiscDsLox440H05 Arabidopsis thaliana... 113 1e-029
gb|CW795435.1|CW795435 WiscDsLox440G04 Arabidopsis thaliana... 113 1e-029
gb|BP656759.1|BP656759 BP656759 RAFL19 Arabidopsis thaliana... 81 7e-029
ref|NM_114571.1| Arabidopsis thaliana hydrolase, hydrolyzin... 112 9e-029
gb|BP644922.1|BP644922 BP644922 RAFL19 Arabidopsis thaliana... 125 1e-027
gb|AV812922.1|AV812922 AV812922 RAFL9 Arabidopsis thaliana ... 111 1e-027
gb|AV566057.1|AV566057 AV566057 Arabidopsis thaliana green ... 125 1e-027
gb|AA042163.1|AA042163 24484 CD4-13 Arabidopsis thaliana cD... 105 2e-027
gb|CL513334.1|CL513334 SAIL_874_A12.v1 SAIL Collection Arab... 57 3e-027
gb|AA395613.1|AA395613 28001 Lambda-PRL2 Arabidopsis thalia... 100 3e-027
gb|AY062716.1| Arabidopsis thaliana beta-D-glucan exohydrol... 105 4e-027
ref|NM_114567.2| Arabidopsis thaliana hydrolase, hydrolyzin... 105 4e-027
gb|AY093074.1| Arabidopsis thaliana beta-D-glucan exohydrol... 105 4e-027
emb|BX823770.1|CNS0A4WM Arabidopsis thaliana Full-length cD... 105 4e-027
gb|AY093346.1| Arabidopsis thaliana beta-D-glucan exohydrol... 105 4e-027
gb|BT008366.1| Arabidopsis thaliana At3g47000 gene, complet... 105 4e-027
gb|AF428358.1|AF428358 Arabidopsis thaliana AT3g47000/F13I1... 105 4e-027
gb|CF773234.1|CF773234 AG_FSL_14F02 Arabidopsis ag-1 35S:AG... 105 1e-025
gb|BX835416.1|BX835416 BX835416 Arabidopsis thaliana Adult ... 99 3e-025
gb|AV795646.1|AV795646 AV795646 RAFL8 Arabidopsis thaliana ... 105 6e-025
gb|AV811537.1|AV811537 AV811537 RAFL9 Arabidopsis thaliana ... 108 1e-024
gb|BP650046.1|BP650046 BP650046 RAFL19 Arabidopsis thaliana... 81 2e-024
gb|BP574992.1|BP574992 BP574992 RAFL14 Arabidopsis thaliana... 107 2e-024
gb|AU228401.1|AU228401 AU228401 RAFL16 Arabidopsis thaliana... 113 4e-024
gb|BP646984.1|BP646984 BP646984 RAFL19 Arabidopsis thaliana... 113 4e-024
gb|BP785503.1|BP785503 BP785503 RAFL7 Arabidopsis thaliana ... 113 4e-024
gb|BP786358.1|BP786358 BP786358 RAFL7 Arabidopsis thaliana ... 113 4e-024
gb|BZ287126.1|BZ287126 SALK_020496.31.20.x Arabidopsis thal... 113 5e-024
gb|BP574741.1|BP574741 BP574741 RAFL14 Arabidopsis thaliana... 105 6e-024
gb|BP780280.1|BP780280 BP780280 RAFL7 Arabidopsis thaliana ... 105 6e-024
gb|BZ596425.1|BZ596425 SALK_092562.28.15.x Arabidopsis thal... 112 7e-024
gb|AU226905.1|AU226905 AU226905 RAFL14 Arabidopsis thaliana... 110 3e-023
gb|BP659455.1|BP659455 BP659455 RAFL19 Arabidopsis thaliana... 110 3e-023
ref|NM_114572.2| Arabidopsis thaliana hydrolase, hydrolyzin... 110 3e-023
gb|BP586974.1|BP586974 BP586974 RAFL15 Arabidopsis thaliana... 74 4e-023
emb|BX830026.1|CNS0A1C4 Arabidopsis thaliana Full-length cD... 68 5e-023
gb|BP649232.1|BP649232 BP649232 RAFL19 Arabidopsis thaliana... 106 4e-022
gb|BP566293.1|BP566293 BP566293 RAFL14 Arabidopsis thaliana... 98 6e-022
gb|BP570210.1|BP570210 BP570210 RAFL14 Arabidopsis thaliana... 105 2e-021
gb|AV802226.1|AV802226 AV802226 RAFL9 Arabidopsis thaliana ... 74 6e-021
gb|BP640122.1|BP640122 BP640122 RAFL19 Arabidopsis thaliana... 81 9e-021
>gb|AV783076.1|AV783076 AV783076 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-05-B18 3',
mRNA sequence
Length = 614
Score = 199 bits (428), Expect = 8e-050
Identities = 75/103 (72%), Positives = 86/103 (83%)
Frame = +1 / -2
Query: 7 NLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVL 186
NLTI +PGPS I VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D L
Sbjct: 505 NLTISDPGPSIIGNVCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADAL 326
Query: 187 FGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FGDYGFTG L RTWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 325 FGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 197
Score = 107 bits (228), Expect = 3e-022
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = -3 / +3
Query: 257 FIGSWSTDLNHVRGSVPVKP*SPKSTSVMPWPSLPGSQAATSACTVPRNGCITTGRPLMS 78
FIGS TDLNHVR + PV P*SP S P PS+PGSQAAT A V G ITTGRP +
Sbjct: 255 FIGSCFTDLNHVRANFPVNP*SPNRASATP*PSVPGSQAATRASMVET*G*ITTGRPETT 434
Query: 77 TVAQGTAPHTVWMVLGPGSGIVRFM 3
T T PHT ++LGPGS +VRF+
Sbjct: 435 TTTHFTDPHTFPIMLGPGSLMVRFV 509
>gb|AV784514.1|AV784514 AV784514 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-20-L23 3',
mRNA sequence
Length = 681
Score = 199 bits (428), Expect = 8e-050
Identities = 75/103 (72%), Positives = 86/103 (83%)
Frame = +1 / -1
Query: 7 NLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVL 186
NLTI +PGPS I VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D L
Sbjct: 558 NLTISDPGPSIIGNVCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADAL 379
Query: 187 FGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FGDYGFTG L RTWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 378 FGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 250
Score = 107 bits (228), Expect = 3e-022
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = -3 / +2
Query: 257 FIGSWSTDLNHVRGSVPVKP*SPKSTSVMPWPSLPGSQAATSACTVPRNGCITTGRPLMS 78
FIGS TDLNHVR + PV P*SP S P PS+PGSQAAT A V G ITTGRP +
Sbjct: 308 FIGSCFTDLNHVRANFPVNP*SPNRASATP*PSVPGSQAATRASMVET*G*ITTGRPETT 487
Query: 77 TVAQGTAPHTVWMVLGPGSGIVRFM 3
T T PHT ++LGPGS +VRF+
Sbjct: 488 TTTHFTDPHTFPIMLGPGSLMVRFV 562
>gb|BU636687.1|BU636687 010C07 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 566
Score = 199 bits (428), Expect = 8e-050
Identities = 75/103 (72%), Positives = 86/103 (83%)
Frame = +1 / +1
Query: 7 NLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVL 186
NLTI +PGPS I VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D L
Sbjct: 28 NLTISDPGPSIIGNVCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADAL 207
Query: 187 FGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FGDYGFTG L RTWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 208 FGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 336
Score = 107 bits (228), Expect = 3e-022
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = -3 / -1
Query: 257 FIGSWSTDLNHVRGSVPVKP*SPKSTSVMPWPSLPGSQAATSACTVPRNGCITTGRPLMS 78
FIGS TDLNHVR + PV P*SP S P PS+PGSQAAT A V G ITTGRP +
Sbjct: 278 FIGSCFTDLNHVRANFPVNP*SPNRASATP*PSVPGSQAATRASMVET*G*ITTGRPETT 99
Query: 77 TVAQGTAPHTVWMVLGPGSGIVRFM 3
T T PHT ++LGPGS +VRF+
Sbjct: 98 TTTHFTDPHTFPIMLGPGSLMVRFV 24
>gb|AV543737.1|AV543737 AV543737 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ21h03F 3', mRNA sequence
Length = 606
Score = 199 bits (428), Expect = 8e-050
Identities = 75/103 (72%), Positives = 86/103 (83%)
Frame = +1 / -3
Query: 7 NLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVL 186
NLTI +PGPS I VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D L
Sbjct: 502 NLTISDPGPSIIGNVCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADAL 323
Query: 187 FGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FGDYGFTG L RTWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 322 FGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 194
Score = 107 bits (228), Expect = 3e-022
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = -3 / +3
Query: 257 FIGSWSTDLNHVRGSVPVKP*SPKSTSVMPWPSLPGSQAATSACTVPRNGCITTGRPLMS 78
FIGS TDLNHVR + PV P*SP S P PS+PGSQAAT A V G ITTGRP +
Sbjct: 252 FIGSCFTDLNHVRANFPVNP*SPNRASATP*PSVPGSQAATRASMVET*G*ITTGRPETT 431
Query: 77 TVAQGTAPHTVWMVLGPGSGIVRFM 3
T T PHT ++LGPGS +VRF+
Sbjct: 432 TTTHFTDPHTFPIMLGPGSLMVRFV 506
>gb|CK121760.1|CK121760 201b14.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B14201
5-PRIME, mRNA sequence
Length = 814
Score = 199 bits (428), Expect = 8e-050
Identities = 75/103 (72%), Positives = 86/103 (83%)
Frame = +1 / +3
Query: 7 NLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVL 186
NLTI +PGPS I VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D L
Sbjct: 330 NLTISDPGPSIIGNVCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADAL 509
Query: 187 FGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FGDYGFTG L RTWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 510 FGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 638
Score = 107 bits (228), Expect = 3e-022
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = -3 / -1
Query: 257 FIGSWSTDLNHVRGSVPVKP*SPKSTSVMPWPSLPGSQAATSACTVPRNGCITTGRPLMS 78
FIGS TDLNHVR + PV P*SP S P PS+PGSQAAT A V G ITTGRP +
Sbjct: 580 FIGSCFTDLNHVRANFPVNP*SPNRASATP*PSVPGSQAATRASMVET*G*ITTGRPETT 401
Query: 77 TVAQGTAPHTVWMVLGPGSGIVRFM 3
T T PHT ++LGPGS +VRF+
Sbjct: 400 TTTHFTDPHTFPIMLGPGSLMVRFV 326
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1
Length = 96102
Score = 199 bits (428), Expect = 8e-050
Identities = 75/103 (72%), Positives = 86/103 (83%)
Frame = +1 / -1
Query: 7 NLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVL 186
NLTI +PGPS I VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D L
Sbjct: 51624 NLTISDPGPSIIGNVCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADAL 51445
Query: 187 FGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FGDYGFTG L RTWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 51444 FGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 51316
Score = 136 bits (291), Expect(2) = 3e-043
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = +1 / -3
Query: 115 LGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPL 294
+ + ALVAAWLPG+EGQG+ DVLFGDYGFTG L RTWFK+VDQLPMN GD HYDPL+P
Sbjct: 47977 ISNIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLYPF 47798
Query: 295 GFGLTTQ 315
GFGL T+
Sbjct: 47797 GFGLITK 47777
Score = 107 bits (228), Expect = 3e-022
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = -3 / +2
Query: 257 FIGSWSTDLNHVRGSVPVKP*SPKSTSVMPWPSLPGSQAATSACTVPRNGCITTGRPLMS 78
FIGS TDLNHVR + PV P*SP S P PS+PGSQAAT A V G ITTGRP +
Sbjct: 51374 FIGSCFTDLNHVRANFPVNP*SPNRASATP*PSVPGSQAATRASMVET*G*ITTGRPETT 51553
Query: 77 TVAQGTAPHTVWMVLGPGSGIVRFM 3
T T PHT ++LGPGS +VRF+
Sbjct: 51554 TTTHFTDPHTFPIMLGPGSLMVRFV 51628
Score = 61.1 bits (127), Expect(2) = 3e-043
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +1 / -3
Query: 1 SMNLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQ 108
S NLTI EPGPSTI VC +V C V++SGRPVV+Q
Sbjct: 48085 STNLTISEPGPSTIGNVCASVKCVVVVVSGRPVVMQ 47978
>gb|AF462808.1|AF462808 Arabidopsis thaliana beta-D-glucan exohydrolase-like protein mRNA,
complete cds
Length = 2194
Score = 199 bits (428), Expect = 8e-050
Identities = 75/103 (72%), Positives = 86/103 (83%)
Frame = +1 / +1
Query: 7 NLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVL 186
NLTI +PGPS I VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D L
Sbjct: 1690 NLTISDPGPSIIGNVCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADAL 1869
Query: 187 FGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FGDYGFTG L RTWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 1870 FGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 1998
Score = 107 bits (228), Expect = 3e-022
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = -3 / -3
Query: 257 FIGSWSTDLNHVRGSVPVKP*SPKSTSVMPWPSLPGSQAATSACTVPRNGCITTGRPLMS 78
FIGS TDLNHVR + PV P*SP S P PS+PGSQAAT A V G ITTGRP +
Sbjct: 1940 FIGSCFTDLNHVRANFPVNP*SPNRASATP*PSVPGSQAATRASMVET*G*ITTGRPETT 1761
Query: 77 TVAQGTAPHTVWMVLGPGSGIVRFM 3
T T PHT ++LGPGS +VRF+
Sbjct: 1760 TTTHFTDPHTFPIMLGPGSLMVRFV 1686
>gb|AY091027.1| Arabidopsis thaliana putative beta-D-glucan exohydrolase (At5g20950)
mRNA, complete cds
Length = 2220
Score = 199 bits (428), Expect = 8e-050
Identities = 75/103 (72%), Positives = 86/103 (83%)
Frame = +1 / +3
Query: 7 NLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVL 186
NLTI +PGPS I VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D L
Sbjct: 1710 NLTISDPGPSIIGNVCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADAL 1889
Query: 187 FGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FGDYGFTG L RTWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 1890 FGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 2018
Score = 107 bits (228), Expect = 3e-022
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = -3 / -3
Query: 257 FIGSWSTDLNHVRGSVPVKP*SPKSTSVMPWPSLPGSQAATSACTVPRNGCITTGRPLMS 78
FIGS TDLNHVR + PV P*SP S P PS+PGSQAAT A V G ITTGRP +
Sbjct: 1960 FIGSCFTDLNHVRANFPVNP*SPNRASATP*PSVPGSQAATRASMVET*G*ITTGRPETT 1781
Query: 77 TVAQGTAPHTVWMVLGPGSGIVRFM 3
T T PHT ++LGPGS +VRF+
Sbjct: 1780 TTTHFTDPHTFPIMLGPGSLMVRFV 1706
>gb|AY142679.1| Arabidopsis thaliana putative beta-D-glucan exohydrolase (At5g20950)
mRNA, complete cds
Length = 1906
Score = 199 bits (428), Expect = 8e-050
Identities = 75/103 (72%), Positives = 86/103 (83%)
Frame = +1 / +1
Query: 7 NLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVL 186
NLTI +PGPS I VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D L
Sbjct: 1552 NLTISDPGPSIIGNVCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADAL 1731
Query: 187 FGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FGDYGFTG L RTWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 1732 FGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 1860
Score = 107 bits (228), Expect = 3e-022
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = -3 / -3
Query: 257 FIGSWSTDLNHVRGSVPVKP*SPKSTSVMPWPSLPGSQAATSACTVPRNGCITTGRPLMS 78
FIGS TDLNHVR + PV P*SP S P PS+PGSQAAT A V G ITTGRP +
Sbjct: 1802 FIGSCFTDLNHVRANFPVNP*SPNRASATP*PSVPGSQAATRASMVET*G*ITTGRPETT 1623
Query: 77 TVAQGTAPHTVWMVLGPGSGIVRFM 3
T T PHT ++LGPGS +VRF+
Sbjct: 1622 TTTHFTDPHTFPIMLGPGSLMVRFV 1548
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 199 bits (428), Expect = 8e-050
Identities = 75/103 (72%), Positives = 86/103 (83%)
Frame = +1 / -2
Query: 7 NLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVL 186
NLTI +PGPS I VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D L
Sbjct: 6820464 NLTISDPGPSIIGNVCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADAL 6820285
Query: 187 FGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FGDYGFTG L RTWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 6820284 FGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 6820156
Score = 172 bits (370), Expect = 8e-042
Identities = 64/105 (60%), Positives = 84/105 (80%)
Frame = +1 / +2
Query: 1 SMNLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITD 180
S LT+ +PGP+ I + C AV C V+ISGRP+V++P++ ++ ALVAAWLPG+EGQGITD
Sbjct: 1376264 SDKLTMLDPGPAIISSTCQAVKCVVVVISGRPLVMEPYVASIDALVAAWLPGTEGQGITD 1376443
Query: 181 VLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
LFGD+GF+G LP TWF++ +QLPM+YGD HYDPLF G GL T+
Sbjct: 1376444 ALFGDHGFSGKLPVTWFRNTEQLPMSYGDTHYDPLFAYGSGLETE 1376578
Score = 136 bits (291), Expect = 6e-031
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = +1 / -1
Query: 115 LGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPL 294
+ + ALVAAWLPG+EGQG+ DVLFGDYGFTG L RTWFK+VDQLPMN GD HYDPL+P
Sbjct: 6816817 ISNIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLYPF 6816638
Query: 295 GFGLTTQ 315
GFGL T+
Sbjct: 6816637 GFGLITK 6816617
Score = 107 bits (228), Expect = 3e-022
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = -3 / +2
Query: 257 FIGSWSTDLNHVRGSVPVKP*SPKSTSVMPWPSLPGSQAATSACTVPRNGCITTGRPLMS 78
FIGS TDLNHVR + PV P*SP S P PS+PGSQAAT A V G ITTGRP +
Sbjct: 6820214 FIGSCFTDLNHVRANFPVNP*SPNRASATP*PSVPGSQAATRASMVET*G*ITTGRPETT 6820393
Query: 77 TVAQGTAPHTVWMVLGPGSGIVRFM 3
T T PHT ++LGPGS +VRF+
Sbjct: 6820394 TTTHFTDPHTFPIMLGPGSLMVRFV 6820468
>ref|NM_180717.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT5G20950 transcript variant AT5G20950.1 mRNA, complete
cds
Length = 2247
Score = 199 bits (428), Expect = 8e-050
Identities = 75/103 (72%), Positives = 86/103 (83%)
Frame = +1 / +2
Query: 7 NLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVL 186
NLTI +PGPS I VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D L
Sbjct: 1691 NLTISDPGPSIIGNVCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADAL 1870
Query: 187 FGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FGDYGFTG L RTWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 1871 FGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 1999
Score = 107 bits (228), Expect = 3e-022
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = -3 / -1
Query: 257 FIGSWSTDLNHVRGSVPVKP*SPKSTSVMPWPSLPGSQAATSACTVPRNGCITTGRPLMS 78
FIGS TDLNHVR + PV P*SP S P PS+PGSQAAT A V G ITTGRP +
Sbjct: 1941 FIGSCFTDLNHVRANFPVNP*SPNRASATP*PSVPGSQAATRASMVET*G*ITTGRPETT 1762
Query: 77 TVAQGTAPHTVWMVLGPGSGIVRFM 3
T T PHT ++LGPGS +VRF+
Sbjct: 1761 TTTHFTDPHTFPIMLGPGSLMVRFV 1687
>ref|NM_122104.3| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT5G20950 transcript variant AT5G20950.2 mRNA, complete
cds
Length = 2266
Score = 199 bits (428), Expect = 8e-050
Identities = 75/103 (72%), Positives = 86/103 (83%)
Frame = +1 / +3
Query: 7 NLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVL 186
NLTI +PGPS I VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D L
Sbjct: 1710 NLTISDPGPSIIGNVCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADAL 1889
Query: 187 FGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FGDYGFTG L RTWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 1890 FGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 2018
Score = 107 bits (228), Expect = 3e-022
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = -3 / -1
Query: 257 FIGSWSTDLNHVRGSVPVKP*SPKSTSVMPWPSLPGSQAATSACTVPRNGCITTGRPLMS 78
FIGS TDLNHVR + PV P*SP S P PS+PGSQAAT A V G ITTGRP +
Sbjct: 1960 FIGSCFTDLNHVRANFPVNP*SPNRASATP*PSVPGSQAATRASMVET*G*ITTGRPETT 1781
Query: 77 TVAQGTAPHTVWMVLGPGSGIVRFM 3
T T PHT ++LGPGS +VRF+
Sbjct: 1780 TTTHFTDPHTFPIMLGPGSLMVRFV 1706
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 199 bits (428), Expect = 8e-050
Identities = 75/103 (72%), Positives = 86/103 (83%)
Frame = +1 / -3
Query: 7 NLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVL 186
NLTI +PGPS I VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D L
Sbjct: 7107934 NLTISDPGPSIIGNVCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADAL 7107755
Query: 187 FGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FGDYGFTG L RTWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 7107754 FGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 7107626
Score = 172 bits (370), Expect = 8e-042
Identities = 64/105 (60%), Positives = 84/105 (80%)
Frame = +1 / +3
Query: 1 SMNLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITD 180
S LT+ +PGP+ I + C AV C V+ISGRP+V++P++ ++ ALVAAWLPG+EGQGITD
Sbjct: 1426002 SDKLTMLDPGPAIISSTCQAVKCVVVVISGRPLVMEPYVASIDALVAAWLPGTEGQGITD 1426181
Query: 181 VLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
LFGD+GF+G LP TWF++ +QLPM+YGD HYDPLF G GL T+
Sbjct: 1426182 ALFGDHGFSGKLPVTWFRNTEQLPMSYGDTHYDPLFAYGSGLETE 1426316
Score = 136 bits (291), Expect = 6e-031
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = +1 / -2
Query: 115 LGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPL 294
+ + ALVAAWLPG+EGQG+ DVLFGDYGFTG L RTWFK+VDQLPMN GD HYDPL+P
Sbjct: 7104287 ISNIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLYPF 7104108
Query: 295 GFGLTTQ 315
GFGL T+
Sbjct: 7104107 GFGLITK 7104087
Score = 107 bits (228), Expect = 3e-022
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = -3 / +3
Query: 257 FIGSWSTDLNHVRGSVPVKP*SPKSTSVMPWPSLPGSQAATSACTVPRNGCITTGRPLMS 78
FIGS TDLNHVR + PV P*SP S P PS+PGSQAAT A V G ITTGRP +
Sbjct: 7107684 FIGSCFTDLNHVRANFPVNP*SPNRASATP*PSVPGSQAATRASMVET*G*ITTGRPETT 7107863
Query: 77 TVAQGTAPHTVWMVLGPGSGIVRFM 3
T T PHT ++LGPGS +VRF+
Sbjct: 7107864 TTTHFTDPHTFPIMLGPGSLMVRFV 7107938
>dbj|AK221104.1| Arabidopsis thaliana mRNA for beta-D-glucan exohydrolase-like
protein, partial cds, clone: RAFL22-88-O09
Length = 477
Score = 178 bits (383), Expect = 1e-043
Identities = 66/89 (74%), Positives = 76/89 (85%)
Frame = +1 / +1
Query: 49 VCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTW 228
VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D LFGDYGFTG L RTW
Sbjct: 7 VCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADALFGDYGFTGKLARTW 186
Query: 229 FKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 187 FKSVKQLPMNVGDRHYDPLYPFGFGLTTK 273
>gb|AY092999.1| Arabidopsis thaliana beta-glucosidase-like protein (At5g20940) mRNA,
complete cds
Length = 2078
Score = 136 bits (291), Expect(2) = 3e-043
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = +1 / +1
Query: 115 LGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPL 294
+ + ALVAAWLPG+EGQG+ DVLFGDYGFTG L RTWFK+VDQLPMN GD HYDPL+P
Sbjct: 1720 ISNIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLYPF 1899
Query: 295 GFGLTTQ 315
GFGL T+
Sbjct: 1900 GFGLITK 1920
Score = 61.1 bits (127), Expect(2) = 3e-043
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +1 / +1
Query: 1 SMNLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQ 108
S NLTI EPGPSTI VC +V C V++SGRPVV+Q
Sbjct: 1612 STNLTISEPGPSTIGNVCASVKCVVVVVSGRPVVMQ 1719
>ref|NM_122103.3| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT5G20940 mRNA, complete cds
Length = 2078
Score = 136 bits (291), Expect(2) = 3e-043
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = +1 / +1
Query: 115 LGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPL 294
+ + ALVAAWLPG+EGQG+ DVLFGDYGFTG L RTWFK+VDQLPMN GD HYDPL+P
Sbjct: 1720 ISNIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLYPF 1899
Query: 295 GFGLTTQ 315
GFGL T+
Sbjct: 1900 GFGLITK 1920
Score = 61.1 bits (127), Expect(2) = 3e-043
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +1 / +1
Query: 1 SMNLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQ 108
S NLTI EPGPSTI VC +V C V++SGRPVV+Q
Sbjct: 1612 STNLTISEPGPSTIGNVCASVKCVVVVVSGRPVVMQ 1719
>gb|AV784755.1|AV784755 AV784755 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-07-P20 3',
mRNA sequence
Length = 619
Score = 136 bits (291), Expect(2) = 3e-043
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = +1 / -3
Query: 115 LGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPL 294
+ + ALVAAWLPG+EGQG+ DVLFGDYGFTG L RTWFK+VDQLPMN GD HYDPL+P
Sbjct: 359 ISNIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLYPF 180
Query: 295 GFGLTTQ 315
GFGL T+
Sbjct: 179 GFGLITK 159
Score = 61.1 bits (127), Expect(2) = 3e-043
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +1 / -3
Query: 1 SMNLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQ 108
S NLTI EPGPSTI VC +V C V++SGRPVV+Q
Sbjct: 467 STNLTISEPGPSTIGNVCASVKCVVVVVSGRPVVMQ 360
>gb|BP831413.1|BP831413 BP831413 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-88-O09 5',
mRNA sequence
Length = 408
Score = 175 bits (376), Expect = 1e-042
Identities = 65/89 (73%), Positives = 75/89 (84%)
Frame = +1 / +3
Query: 49 VCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTW 228
VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D LFGDYGFTG L TW
Sbjct: 6 VCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADALFGDYGFTGKLAGTW 185
Query: 229 FKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
FKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 186 FKSVKQLPMNVGDRHYDPLYPFGFGLTTK 272
>dbj|AB008271.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUK11
Length = 79073
Score = 172 bits (370), Expect = 8e-042
Identities = 64/105 (60%), Positives = 84/105 (80%)
Frame = +1 / +3
Query: 1 SMNLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITD 180
S LT+ +PGP+ I + C AV C V+ISGRP+V++P++ ++ ALVAAWLPG+EGQGITD
Sbjct: 73527 SDKLTMLDPGPAIISSTCQAVKCVVVVISGRPLVMEPYVASIDALVAAWLPGTEGQGITD 73706
Query: 181 VLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
LFGD+GF+G LP TWF++ +QLPM+YGD HYDPLF G GL T+
Sbjct: 73707 ALFGDHGFSGKLPVTWFRNTEQLPMSYGDTHYDPLFAYGSGLETE 73841
>dbj|AK118082.1| Arabidopsis thaliana At5g04885 mRNA for unknown protein, complete
cds, clone: RAFL19-33-I17
Length = 2344
Score = 172 bits (370), Expect = 8e-042
Identities = 64/105 (60%), Positives = 84/105 (80%)
Frame = +1 / +3
Query: 1 SMNLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITD 180
S LT+ +PGP+ I + C AV C V+ISGRP+V++P++ ++ ALVAAWLPG+EGQGITD
Sbjct: 1692 SDKLTMLDPGPAIISSTCQAVKCVVVVISGRPLVMEPYVASIDALVAAWLPGTEGQGITD 1871
Query: 181 VLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
LFGD+GF+G LP TWF++ +QLPM+YGD HYDPLF G GL T+
Sbjct: 1872 ALFGDHGFSGKLPVTWFRNTEQLPMSYGDTHYDPLFAYGSGLETE 2006
>ref|NM_147836.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT5G04885 mRNA, complete cds
Length = 2349
Score = 172 bits (370), Expect = 8e-042
Identities = 64/105 (60%), Positives = 84/105 (80%)
Frame = +1 / +1
Query: 1 SMNLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITD 180
S LT+ +PGP+ I + C AV C V+ISGRP+V++P++ ++ ALVAAWLPG+EGQGITD
Sbjct: 1693 SDKLTMLDPGPAIISSTCQAVKCVVVVISGRPLVMEPYVASIDALVAAWLPGTEGQGITD 1872
Query: 181 VLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
LFGD+GF+G LP TWF++ +QLPM+YGD HYDPLF G GL T+
Sbjct: 1873 ALFGDHGFSGKLPVTWFRNTEQLPMSYGDTHYDPLFAYGSGLETE 2007
>gb|AV798147.1|AV798147 AV798147 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-15-C09 3',
mRNA sequence
Length = 445
Score = 167 bits (360), Expect = 2e-040
Identities = 62/86 (72%), Positives = 72/86 (83%)
Frame = +1 / -2
Query: 58 AVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKS 237
+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D LFGDYGFTG L RTWFKS
Sbjct: 444 SVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADALFGDYGFTGKLARTWFKS 265
Query: 238 VDQLPMNYGDEHYDPLFPLGFGLTTQ 315
V QLPMN GD HYDP +P GFGLTT+
Sbjct: 264 VKQLPMNVGDRHYDPFYPFGFGLTTK 187
>gb|BP814948.1|BP814948 BP814948 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-37-F20 5',
mRNA sequence
Length = 383
Score = 148 bits (318), Expect(2) = 1e-038
Identities = 55/74 (74%), Positives = 63/74 (85%)
Frame = +1 / +1
Query: 94 PVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEH 273
P +IQP++ T+ ALVAAWLPG+EGQG+ D LFGDYGFTG L RTWFKSV QLPMN GD H
Sbjct: 52 PWLIQPYVSTIDALVAAWLPGTEGQGVADALFGDYGFTGKLARTWFKSVKQLPMNVGDRH 231
Query: 274 YDPLFPLGFGLTTQ 315
YDPL+P GFGLTT+
Sbjct: 232 YDPLYPFGFGLTTK 273
Score = 33.1 bits (66), Expect(2) = 1e-038
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +3
Query: 49 VCGAVPCATVLISGRPV 99
VCG+V C V++SGRPV
Sbjct: 6 VCGSVKCVVVVVSGRPV 56
>gb|BP596364.1|BP596364 BP596364 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-34-F03 3',
mRNA sequence
Length = 429
Score = 160 bits (345), Expect = 2e-038
Identities = 60/80 (75%), Positives = 69/80 (86%)
Frame = +1 / -2
Query: 76 VLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPM 255
V++S RPVVIQP++ T+ ALVAAWLPG+EGQG+ D LFGDYGFTG L RTWFKSV QLPM
Sbjct: 425 VVVSARPVVIQPYVSTIDALVAAWLPGTEGQGVADALFGDYGFTGKLARTWFKSVKQLPM 246
Query: 256 NYGDEHYDPLFPLGFGLTTQ 315
N GD HYDPL+P GFGLTT+
Sbjct: 245 NVGDRHYDPLYPFGFGLTTK 186
>gb|BP586699.1|BP586699 BP586699 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-07-E15 3',
mRNA sequence
Length = 457
Score = 160 bits (343), Expect = 4e-038
Identities = 60/86 (69%), Positives = 70/86 (81%)
Frame = +1 / -2
Query: 58 AVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKS 237
+V C VL+S RP+VI P++ T+ ALVAAWLPG+EGQG+ D LFGDYGFTG L RTWFKS
Sbjct: 453 SVKCVVVLVSARPLVIHPYVSTIDALVAAWLPGTEGQGVADALFGDYGFTGKLARTWFKS 274
Query: 238 VDQLPMNYGDEHYDPLFPLGFGLTTQ 315
V QLPMN GD HYDPL+P FGLTT+
Sbjct: 273 VKQLPMNVGDRHYDPLYPFIFGLTTK 196
>gb|AQ968670.1|AQ968670 LERJE11TR LERG Arabidopsis thaliana genomic clone LERJE11, DNA
sequence
Length = 572
Score = 159 bits (341), Expect = 8e-038
Identities = 60/86 (69%), Positives = 71/86 (82%)
Frame = +1 / +2
Query: 1 SMNLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITD 180
S NLTI EPGPSTI VC +V C V++SGRPVV+QP++ + ALVAAWLPG+E QG+ D
Sbjct: 314 STNLTISEPGPSTIGNVCASVKCVVVVVSGRPVVMQPYISNIDALVAAWLPGTESQGVAD 493
Query: 181 VLFGDYGFTGTLPRTWFKSVDQLPMN 258
VLFGDYGFTG + RTWFK+VDQLPMN
Sbjct: 494 VLFGDYGFTGKMARTWFKTVDQLPMN 571
>gb|BP641347.1|BP641347 BP641347 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-54-O19 3',
mRNA sequence
Length = 442
Score = 158 bits (340), Expect = 1e-037
Identities = 60/91 (65%), Positives = 72/91 (79%)
Frame = +1 / -2
Query: 43 QTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPR 222
+ VCG+V C V++S RPVVIQP++ T+ ALVAA LP + +G+ D LFGDYGFTG L R
Sbjct: 441 RNVCGSVKCVVVVVSARPVVIQPYVSTIDALVAACLPEQKVKGVADALFGDYGFTGNLAR 262
Query: 223 TWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
TWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 261 TWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 169
>gb|BP786546.1|BP786546 BP786546 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-99-L07 3',
mRNA sequence
Length = 414
Score = 158 bits (339), Expect = 2e-037
Identities = 59/76 (77%), Positives = 66/76 (86%)
Frame = +1 / -1
Query: 88 GRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGD 267
GRPVVIQP++ T+ ALVAAWLPG+EGQG+ D LFGDYGFTG L RTWFKSV QLPMN GD
Sbjct: 414 GRPVVIQPYVSTIDALVAAWLPGTEGQGVADALFGDYGFTGKLARTWFKSVKQLPMNVGD 235
Query: 268 EHYDPLFPLGFGLTTQ 315
HYDPL+P GFGLTT+
Sbjct: 234 RHYDPLYPFGFGLTTK 187
>gb|BP601838.1|BP601838 BP601838 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-51-N24 3',
mRNA sequence
Length = 425
Score = 157 bits (338), Expect = 2e-037
Identities = 59/77 (76%), Positives = 66/77 (85%)
Frame = +1 / -1
Query: 85 SGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYG 264
SGRPVVI P++ T+ ALVAAWLPG+EGQG+ D LFGDYGFTG L RTWFKSV QLPMN G
Sbjct: 425 SGRPVVIHPYVSTIDALVAAWLPGTEGQGVADALFGDYGFTGKLARTWFKSVKQLPMNVG 246
Query: 265 DEHYDPLFPLGFGLTTQ 315
D HYDPL+P GFGLTT+
Sbjct: 245 DRHYDPLYPFGFGLTTK 195
>gb|BP583906.1|BP583906 BP583906 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-44-A12 3',
mRNA sequence
Length = 431
Score = 118 bits (253), Expect(2) = 2e-037
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = +1 / -2
Query: 13 TIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFG 192
TI +PGP+ I VCG+V C V++SGRPVVI P+ T+H LVAAWLPG+EGQG+ D LFG
Sbjct: 430 TISDPGPTIIVNVCGSVKCVLVVVSGRPVVIHPYFSTIHPLVAAWLPGTEGQGVADALFG 251
Query: 193 DYGFTGTL 216
DY FTG L
Sbjct: 250 DYRFTGKL 227
Score = 58.8 bits (122), Expect(2) = 2e-037
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +1 / -1
Query: 217 PRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
P +SV+QLP+N GD HYDPL+P GFGLTT+
Sbjct: 224 PGRGLRSVNQLPINVGDRHYDPLYPFGFGLTTK 126
>gb|AV799272.1|AV799272 AV799272 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-19-F19 3',
mRNA sequence
Length = 409
Score = 153 bits (328), Expect = 5e-036
Identities = 57/74 (77%), Positives = 64/74 (86%)
Frame = +1 / -2
Query: 94 PVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEH 273
PVVIQP++ T+ ALVAAWLPG+EGQG+ D LFGDYGFTG L RTWFKSV QLPMN GD H
Sbjct: 408 PVVIQPYVSTIDALVAAWLPGTEGQGVADALFGDYGFTGKLARTWFKSVKQLPMNVGDRH 229
Query: 274 YDPLFPLGFGLTTQ 315
YDPL+P GFGLTT+
Sbjct: 228 YDPLYPFGFGLTTK 187
>emb|BX833843.1|CNS09Z59 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL7ZB12 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 918
Score = 152 bits (327), Expect = 7e-036
Identities = 57/104 (54%), Positives = 77/104 (74%)
Frame = +1 / +2
Query: 1 SMNLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITD 180
S LT+ +PGP+ I++ C + C V+ISGRP+V+ P++ ++ ALVAAW G+EGQGIT
Sbjct: 320 SHKLTMLDPGPAIIRSTCEGLKCVVVVISGRPLVMDPYVASIDALVAAWRRGTEGQGITH 499
Query: 181 VLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTT 312
LFGD+GF+G LP TWF+ +QLPM+YG+ HY PLF G GL T
Sbjct: 500 ALFGDHGFSGKLPLTWFRHTEQLPMSYGETHYHPLFAYGSGLET 631
>gb|AV794844.1|AV794844 AV794844 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-14-N06 3',
mRNA sequence
Length = 441
Score = 128 bits (274), Expect(2) = 1e-035
Identities = 47/59 (79%), Positives = 51/59 (86%)
Frame = +1 / -1
Query: 139 AAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
AAWLPG+EGQG+ D LFGDYGFTG L RTWFKSV QLPMN GD HYDPL+P GFGLTT+
Sbjct: 363 AAWLPGTEGQGVADALFGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPLYPFGFGLTTK 187
Score = 43.7 bits (89), Expect(2) = 1e-035
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1 / -3
Query: 67 CATVLISGRPVVIQPFLGTVHALVAAWLPGS 159
C V++SGRPVVIQP++ T+ ALV G+
Sbjct: 436 CVVVVVSGRPVVIQPYVSTIDALVGGLASGN 344
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9
Length = 110257
Score = 146 bits (313), Expect(2) = 1e-035
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +1 / -1
Query: 46 TVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRT 225
T + C +L++GRP+VI+P++ + AL AWLPG+EGQG+ DVLFGD+ FTGTLPRT
Sbjct: 50983 TCGSGMKCLVILVTGRPLVIEPYIDMLDALAVAWLPGTEGQGVADVLFGDHPFTGTLPRT 50804
Query: 226 WFKSVDQLPMNYGDEHYDPLFPLGFGLTT 312
W K V QLPMN GD++YDPL+P G+G+ T
Sbjct: 50803 WMKHVTQLPMNVGDKNYDPLYPFGYGIKT 50717
Score = 25.4 bits (49), Expect(2) = 1e-035
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1 / -1
Query: 1 SMNLTIPEPGPSTIQTVCGA 60
S L I +PGP T+ CG+
Sbjct: 51031 SPTLGITKPGPDTLSHTCGS 50972
>ref|NM_116136.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT3G62710 mRNA, complete cds
Length = 2110
Score = 146 bits (313), Expect(2) = 1e-035
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +1 / +2
Query: 46 TVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRT 225
T + C +L++GRP+VI+P++ + AL AWLPG+EGQG+ DVLFGD+ FTGTLPRT
Sbjct: 1760 TCGSGMKCLVILVTGRPLVIEPYIDMLDALAVAWLPGTEGQGVADVLFGDHPFTGTLPRT 1939
Query: 226 WFKSVDQLPMNYGDEHYDPLFPLGFGLTT 312
W K V QLPMN GD++YDPL+P G+G+ T
Sbjct: 1940 WMKHVTQLPMNVGDKNYDPLYPFGYGIKT 2026
Score = 25.4 bits (49), Expect(2) = 1e-035
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1 / +2
Query: 1 SMNLTIPEPGPSTIQTVCGA 60
S L I +PGP T+ CG+
Sbjct: 1712 SPTLGITKPGPDTLSHTCGS 1771
>gb|AY062656.1| Arabidopsis thaliana beta-D-glucan exohydrolase-like protein
(At3g62710; F26K9_140) mRNA, complete cds
Length = 2109
Score = 146 bits (313), Expect(2) = 1e-035
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +1 / +2
Query: 46 TVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRT 225
T + C +L++GRP+VI+P++ + AL AWLPG+EGQG+ DVLFGD+ FTGTLPRT
Sbjct: 1760 TCGSGMKCLVILVTGRPLVIEPYIDMLDALAVAWLPGTEGQGVADVLFGDHPFTGTLPRT 1939
Query: 226 WFKSVDQLPMNYGDEHYDPLFPLGFGLTT 312
W K V QLPMN GD++YDPL+P G+G+ T
Sbjct: 1940 WMKHVTQLPMNVGDKNYDPLYPFGYGIKT 2026
Score = 25.4 bits (49), Expect(2) = 1e-035
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1 / +2
Query: 1 SMNLTIPEPGPSTIQTVCGA 60
S L I +PGP T+ CG+
Sbjct: 1712 SPTLGITKPGPDTLSHTCGS 1771
>gb|AY093309.1| Arabidopsis thaliana beta-D-glucan exohydrolase-like protein
(At3g62710) mRNA, complete cds
Length = 2020
Score = 146 bits (313), Expect(2) = 1e-035
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +1 / +1
Query: 46 TVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRT 225
T + C +L++GRP+VI+P++ + AL AWLPG+EGQG+ DVLFGD+ FTGTLPRT
Sbjct: 1684 TCGSGMKCLVILVTGRPLVIEPYIDMLDALAVAWLPGTEGQGVADVLFGDHPFTGTLPRT 1863
Query: 226 WFKSVDQLPMNYGDEHYDPLFPLGFGLTT 312
W K V QLPMN GD++YDPL+P G+G+ T
Sbjct: 1864 WMKHVTQLPMNVGDKNYDPLYPFGYGIKT 1950
Score = 25.4 bits (49), Expect(2) = 1e-035
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1 / +1
Query: 1 SMNLTIPEPGPSTIQTVCGA 60
S L I +PGP T+ CG+
Sbjct: 1636 SPTLGITKPGPDTLSHTCGS 1695
>gb|BP789170.1|BP789170 BP789170 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-37-D20 3',
mRNA sequence
Length = 414
Score = 146 bits (313), Expect(2) = 1e-035
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +1 / -1
Query: 46 TVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRT 225
T + C +L++GRP+VI+P++ + AL AWLPG+EGQG+ DVLFGD+ FTGTLPRT
Sbjct: 354 TCGSGMKCLVILVTGRPLVIEPYIDMLDALAVAWLPGTEGQGVADVLFGDHPFTGTLPRT 175
Query: 226 WFKSVDQLPMNYGDEHYDPLFPLGFGLTT 312
W K V QLPMN GD++YDPL+P G+G+ T
Sbjct: 174 WMKHVTQLPMNVGDKNYDPLYPFGYGIKT 88
Score = 25.4 bits (49), Expect(2) = 1e-035
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1 / -1
Query: 1 SMNLTIPEPGPSTIQTVCGA 60
S L I +PGP T+ CG+
Sbjct: 402 SPTLGITKPGPDTLSHTCGS 343
>gb|AV792692.1|AV792692 AV792692 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-16-D07 3',
mRNA sequence
Length = 439
Score = 145 bits (312), Expect(2) = 2e-035
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +1 / -2
Query: 46 TVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRT 225
T + C +L++GRP+VI+P++ + AL AWLPG+EGQG+ DVLFGD+ FTGTLPRT
Sbjct: 351 TCGSGMKCLMILVTGRPLVIEPYIDMLDALAVAWLPGTEGQGVADVLFGDHPFTGTLPRT 172
Query: 226 WFKSVDQLPMNYGDEHYDPLFPLGFGLTT 312
W K V QLPMN GD++YDPL+P G+G+ T
Sbjct: 171 WMKHVTQLPMNVGDKNYDPLYPFGYGIKT 85
Score = 25.4 bits (49), Expect(2) = 2e-035
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1 / -2
Query: 1 SMNLTIPEPGPSTIQTVCGA 60
S L I +PGP T+ CG+
Sbjct: 399 SPTLGITKPGPDTLSHTCGS 340
>emb|AL773133.1| Arabidopsis thaliana transposon insertion STS SM_3.1247, sequence
tagged site
Length = 380
Score = 146 bits (313), Expect(2) = 4e-035
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +1 / +2
Query: 46 TVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRT 225
T + C +L++GRP+VI+P++ + AL AWLPG+EGQG+ DVLFGD+ FTGTLPRT
Sbjct: 35 TCGSGMKCLVILVTGRPLVIEPYIDMLDALAVAWLPGTEGQGVADVLFGDHPFTGTLPRT 214
Query: 226 WFKSVDQLPMNYGDEHYDPLFPLGFGLTT 312
W K V QLPMN GD++YDPL+P G+G+ T
Sbjct: 215 WMKHVTQLPMNVGDKNYDPLYPFGYGIKT 301
Score = 23.5 bits (45), Expect(2) = 4e-035
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1 / +2
Query: 16 IPEPGPSTIQTVCGA 60
I +PGP T+ CG+
Sbjct: 2 ITKPGPDTLSHTCGS 46
>emb|AL831381.1| Arabidopsis thaliana transposon insertion STS SM_3.28080, sequence
tagged site
Length = 460
Score = 146 bits (313), Expect(2) = 5e-035
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +1 / +3
Query: 46 TVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRT 225
T + C +L++GRP+VI+P++ + AL AWLPG+EGQG+ DVLFGD+ FTGTLPRT
Sbjct: 39 TCGSGMKCLVILVTGRPLVIEPYIDMLDALAVAWLPGTEGQGVADVLFGDHPFTGTLPRT 218
Query: 226 WFKSVDQLPMNYGDEHYDPLFPLGFGLTT 312
W K V QLPMN GD++YDPL+P G+G+ T
Sbjct: 219 WMKHVTQLPMNVGDKNYDPLYPFGYGIKT 305
Score = 23.5 bits (45), Expect(2) = 5e-035
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1 / +3
Query: 16 IPEPGPSTIQTVCGA 60
I +PGP T+ CG+
Sbjct: 6 ITKPGPDTLSHTCGS 50
>gb|AV816720.1|AV816720 AV816720 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-91-L22 3',
mRNA sequence
Length = 401
Score = 149 bits (319), Expect = 9e-035
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +1 / -1
Query: 100 VIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYD 279
VIQP++ T++ALVAAWLPG+EGQG+ D LFGDYGFTG L RTWFKSV QLPMN GD HYD
Sbjct: 401 VIQPYVSTINALVAAWLPGTEGQGVADALFGDYGFTGKLARTWFKSVKQLPMNVGDRHYD 222
Query: 280 PLFPLGFGLTTQ 315
PL+P GFGLTT+
Sbjct: 221 PLYPFGFGLTTK 186
>gb|BP784023.1|BP784023 BP784023 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-89-B04 3',
mRNA sequence
Length = 403
Score = 148 bits (317), Expect = 2e-034
Identities = 55/72 (76%), Positives = 62/72 (86%)
Frame = +1 / -1
Query: 100 VIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYD 279
VIQP++ T+ ALVAAWLPG+EGQG+ D LFGDYGFTG L RTWFKSV QLPMN GD HYD
Sbjct: 403 VIQPYVSTIDALVAAWLPGTEGQGVADALFGDYGFTGKLARTWFKSVKQLPMNVGDRHYD 224
Query: 280 PLFPLGFGLTTQ 315
PL+P GFGLTT+
Sbjct: 223 PLYPFGFGLTTK 188
>gb|BP836524.1|BP836524 BP836524 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-16-L04 5',
mRNA sequence
Length = 397
Score = 101 bits (215), Expect(2) = 2e-034
Identities = 37/57 (64%), Positives = 46/57 (80%)
Frame = +1 / +3
Query: 49 VCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLP 219
VCG+V C V++SGRPVVIQP++ T+ ALVAAWLPG+EGQG+ D LFGDYG + P
Sbjct: 6 VCGSVKCVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADALFGDYGLQESWP 176
Score = 66.1 bits (138), Expect(2) = 2e-034
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = +1 / +2
Query: 205 TGTLPRTWFKSVDQLPMNYGDEHYDPLFPLGFG 303
TG L R WFKSV QLPMN GD HYDPL+P G G
Sbjct: 161 TGKLARRWFKSVKQLPMNVGDRHYDPLYPFGLG 259
>gb|BP588500.1|BP588500 BP588500 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-46-H19 3',
mRNA sequence
Length = 413
Score = 147 bits (316), Expect = 2e-034
Identities = 55/73 (75%), Positives = 62/73 (84%)
Frame = +1 / -1
Query: 97 VVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHY 276
VVIQP++ T+ ALV AWLPG+EGQG+ D LFGDYGFTG L RTWFKSV QLPMN GD HY
Sbjct: 413 VVIQPYVSTIDALVPAWLPGTEGQGVADALFGDYGFTGKLARTWFKSVKQLPMNVGDRHY 234
Query: 277 DPLFPLGFGLTTQ 315
DPL+P GFGLTT+
Sbjct: 233 DPLYPFGFGLTTK 195
>gb|CL497905.1|CL497905 SAIL_649_E01.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_649_E01.v1, DNA sequence
Length = 866
Score = 116 bits (249), Expect(2) = 3e-034
Identities = 45/78 (57%), Positives = 61/78 (78%)
Frame = +1 / -3
Query: 1 SMNLTIPEPGPSTIQTVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITD 180
S LT+ +PGP+ I + C AV C V+ISGRP+V++P++ ++ AL AAWLPG+EGQGITD
Sbjct: 567 SDKLTMLDPGPAIISSTCQAVKCVGVVISGRPLVMEPYVASIDALGAAWLPGTEGQGITD 388
Query: 181 VLFGDYGFTGTLPRTWFK 234
LFGD+GF+G LP T F+
Sbjct: 387 ALFGDHGFSGKLPVTLFR 334
Score = 50.1 bits (103), Expect(2) = 3e-034
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1 / -1
Query: 232 KSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
+S +QLPM+YGD HYDPLF G GL T+
Sbjct: 335 ESTEQLPMSYGDTHYDPLFAYGSGLETE 252
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 146 bits (313), Expect = 6e-034
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +1 / -2
Query: 46 TVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRT 225
T + C +L++GRP+VI+P++ + AL AWLPG+EGQG+ DVLFGD+ FTGTLPRT
Sbjct: 23141240 TCGSGMKCLVILVTGRPLVIEPYIDMLDALAVAWLPGTEGQGVADVLFGDHPFTGTLPRT 23141061
Query: 226 WFKSVDQLPMNYGDEHYDPLFPLGFGLTT 312
W K V QLPMN GD++YDPL+P G+G+ T
Sbjct: 23141060 WMKHVTQLPMNVGDKNYDPLYPFGYGIKT 23140974
Score = 113 bits (242), Expect = 4e-024
Identities = 44/66 (66%), Positives = 51/66 (77%)
Frame = +1 / -1
Query: 115 LGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPL 294
L ALVAAW PG+EGQG++DV+FGDY F G LP +WFK VDQLP+N YDPLFPL
Sbjct: 17281014 LEKTEALVAAWFPGTEGQGMSDVIFGDYDFKGKLPVSWFKRVDQLPLNAEANSYDPLFPL 17280835
Query: 295 GFGLTT 312
GFGLT+
Sbjct: 17280834 GFGLTS 17280817
Score = 112 bits (239), Expect = 1e-023
Identities = 44/64 (68%), Positives = 49/64 (76%)
Frame = +1 / -1
Query: 115 LGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPL 294
L ALVAAWLPG+EGQG+TDV+FGDY F G LP +WFK VDQLP+ YDPLFPL
Sbjct: 17288496 LEKAEALVAAWLPGTEGQGMTDVIFGDYDFEGKLPVSWFKRVDQLPLTADANSYDPLFPL 17288317
Query: 295 GFGL 306
GFGL
Sbjct: 17288316 GFGL 17288305
Score = 110 bits (235), Expect = 3e-023
Identities = 44/64 (68%), Positives = 48/64 (75%)
Frame = +1 / -1
Query: 115 LGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPL 294
L ALVAAWLPG+EGQGI DV+FGDY F G LP TWFK VDQLP++ Y PLFPL
Sbjct: 17292366 LEKAEALVAAWLPGTEGQGIADVIFGDYDFRGKLPATWFKRVDQLPLDIESNGYLPLFPL 17292187
Query: 295 GFGL 306
GFGL
Sbjct: 17292186 GFGL 17292175
Score = 105 bits (224), Expect = 1e-021
Identities = 40/67 (59%), Positives = 49/67 (73%)
Frame = +1 / -2
Query: 115 LGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPL 294
L ALVAAWLPG+EGQG+ DV+FGDY F G LP +WFK V+ LP++ YDPLFP
Sbjct: 17278067 LEKTEALVAAWLPGTEGQGVADVVFGDYDFKGKLPVSWFKHVEHLPLDAHANSYDPLFPF 17277888
Query: 295 GFGLTTQ 315
GFGL ++
Sbjct: 17277887 GFGLNSK 17277867
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 146 bits (313), Expect = 6e-034
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +1 / -3
Query: 46 TVCGAVPCATVLISGRPVVIQPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRT 225
T + C +L++GRP+VI+P++ + AL AWLPG+EGQG+ DVLFGD+ FTGTLPRT
Sbjct: 23208984 TCGSGMKCLVILVTGRPLVIEPYIDMLDALAVAWLPGTEGQGVADVLFGDHPFTGTLPRT 23208805
Query: 226 WFKSVDQLPMNYGDEHYDPLFPLGFGLTT 312
W K V QLPMN GD++YDPL+P G+G+ T
Sbjct: 23208804 WMKHVTQLPMNVGDKNYDPLYPFGYGIKT 23208718
Score = 113 bits (242), Expect = 4e-024
Identities = 44/66 (66%), Positives = 51/66 (77%)
Frame = +1 / -3
Query: 115 LGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPL 294
L ALVAAW PG+EGQG++DV+FGDY F G LP +WFK VDQLP+N YDPLFPL
Sbjct: 17327952 LEKTEALVAAWFPGTEGQGMSDVIFGDYDFKGKLPVSWFKRVDQLPLNAEANSYDPLFPL 17327773
Query: 295 GFGLTT 312
GFGLT+
Sbjct: 17327772 GFGLTS 17327755
Score = 112 bits (239), Expect = 1e-023
Identities = 44/64 (68%), Positives = 49/64 (76%)
Frame = +1 / -3
Query: 115 LGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPL 294
L ALVAAWLPG+EGQG+TDV+FGDY F G LP +WFK VDQLP+ YDPLFPL
Sbjct: 17335434 LEKAEALVAAWLPGTEGQGMTDVIFGDYDFEGKLPVSWFKRVDQLPLTADANSYDPLFPL 17335255
Query: 295 GFGL 306
GFGL
Sbjct: 17335254 GFGL 17335243
Score = 110 bits (235), Expect = 3e-023
Identities = 44/64 (68%), Positives = 48/64 (75%)
Frame = +1 / -3
Query: 115 LGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPL 294
L ALVAAWLPG+EGQGI DV+FGDY F G LP TWFK VDQLP++ Y PLFPL
Sbjct: 17339304 LEKAEALVAAWLPGTEGQGIADVIFGDYDFRGKLPATWFKRVDQLPLDIESNGYLPLFPL 17339125
Query: 295 GFGL 306
GFGL
Sbjct: 17339124 GFGL 17339113
Score = 105 bits (224), Expect = 1e-021
Identities = 40/67 (59%), Positives = 49/67 (73%)
Frame = +1 / -1
Query: 115 LGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPLFPL 294
L ALVAAWLPG+EGQG+ DV+FGDY F G LP +WFK V+ LP++ YDPLFP
Sbjct: 17325005 LEKTEALVAAWLPGTEGQGVADVVFGDYDFKGKLPVSWFKHVEHLPLDAHANSYDPLFPF 17324826
Query: 295 GFGLTTQ 315
GFGL ++
Sbjct: 17324825 GFGLNSK 17324805
>gb|AV805245.1|AV805245 AV805245 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-42-E03 3',
mRNA sequence
Length = 409
Score = 138 bits (295), Expect = 2e-031
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = +1 / -2
Query: 106 QPFLGTVHALVAAWLPGSEGQGITDVLFGDYGFTGTLPRTWFKSVDQLPMNYGDEHYDPL 285
QP++ T+ ALVAAWLPG+EGQG+ D LFGDYGFTG L RTWFKSV QLPMN GD HYDPL
Sbjct: 408 QPYVSTIDALVAAWLPGTEGQGVADALFGDYGFTGKLARTWFKSVKQLPMNVGDRHYDPL 229
Query: 286 FPLGFGL 306
+P GFG+
Sbjct: 228 YPFGFGV 208
>gb|BP595889.1|BP595889 BP595889 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-31-O15 3',
mRNA sequence
Length = 453
Score = 74.8 bits (157), Expect(3) = 2e-031
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +1 / -2
Query: 214 LPRTWFKSVDQLPMNYGDEHYDPLFPLGFGLTTQ 315
L RTWFKSV+QLPMN GD HYDPL+P GFGLTT+
Sbjct: 287 LARTWFKSVNQLPMNVGDRHYDPLYPFGFGLTTK 186
Score = 63.4 bits (132), Expect(3) = 2e-031
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +1 / -3
Query: 127 HALVAAWLPGSEGQGITDVLFGDYGFTGTLP 219
+ALVAAWLPG+EGQG+ D LFGDYGFT + P
Sbjct: 373 YALVAAWLPGTEGQGVADALFGDYGFTESWP 281
Score = 37.3 bits (75), Expect(3) = 2e-031
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1 / -1
Query: 67 CATVLISGRPVVIQPFLGTV 126
C V++SGRPVVIQP++ T+
Sbjct: 432 CVVVVVSGRPVVIQPYVSTI 373
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 936,599,341
Number of Sequences: 1013581
Number of extensions: 11239777
Number of successful extensions: 183910
Number of sequences better than 1.0e-020: 106
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 33376500225
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)