TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419137.2.1
(989 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB258032.1|CB258032 78-E011804-014-004-L20-T7R MPIZ-ADIS... 106 1e-023
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 106 2e-023
gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis tha... 106 2e-023
ref|NM_104930.3| Arabidopsis thaliana lipid binding AT1G625... 106 2e-023
dbj|AK220631.1| Arabidopsis thaliana gene, similar to 14KD ... 106 2e-023
dbj|AK221810.1| Arabidopsis thaliana mRNA for similar to 14... 106 2e-023
dbj|AK221906.1| Arabidopsis thaliana gene, similar to 14KD ... 106 2e-023
emb|BX817971.1|CNS0ACO0 Arabidopsis thaliana Full-length cD... 106 2e-023
gb|BE038366.1|BE038366 AA12E11 AA Arabidopsis thaliana cDNA... 106 2e-023
emb|BX817278.1|CNS0ACNX Arabidopsis thaliana Full-length cD... 106 2e-023
gb|AV527694.1|AV527694 AV527694 Arabidopsis thaliana aboveg... 106 2e-023
emb|AX506884.1| Sequence 1579 from Patent WO0216655 106 2e-023
gb|BT010488.1| Arabidopsis thaliana At1g62510 gene, complet... 106 2e-023
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 100 3e-022
emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosom... 100 3e-022
emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome ... 100 3e-022
ref|NM_117318.2| Arabidopsis thaliana PEARLI 1 1; lipid bin... 97 3e-022
gb|AF412111.1|AF412111 Arabidopsis thaliana AT4g12480/T1P17... 97 3e-022
gb|L43080.1|ATHPEAR Arabidopsis thaliana pEARLI 1 mRNA, com... 97 3e-022
gb|AV824763.1|AV824763 AV824763 RAFL6 Arabidopsis thaliana ... 97 3e-022
gb|AV544210.1|AV544210 AV544210 Arabidopsis thaliana roots ... 97 3e-022
gb|AV536218.1|AV536218 AV536218 Arabidopsis thaliana liquid... 97 3e-022
gb|AV544118.1|AV544118 AV544118 Arabidopsis thaliana roots ... 97 3e-022
gb|AV537038.1|AV537038 AV537038 Arabidopsis thaliana liquid... 97 3e-022
gb|AI999596.1|AI999596 701556592 A. thaliana, Columbia Col-... 97 3e-022
gb|AV545232.1|AV545232 AV545232 Arabidopsis thaliana roots ... 97 3e-022
gb|AV537143.1|AV537143 AV537143 Arabidopsis thaliana liquid... 97 3e-022
ref|NM_117319.2| Arabidopsis thaliana lipid binding AT4G124... 100 9e-022
gb|AY052336.1| Arabidopsis thaliana AT4g12490/T1P17_80 mRNA... 100 9e-022
gb|AV536418.1|AV536418 AV536418 Arabidopsis thaliana liquid... 100 9e-022
gb|AV540262.1|AV540262 AV540262 Arabidopsis thaliana roots ... 100 9e-022
gb|AV537263.1|AV537263 AV537263 Arabidopsis thaliana liquid... 100 9e-022
gb|AY061906.1| Arabidopsis thaliana AT4g12490/T1P17_80 mRNA... 100 9e-022
gb|AV539803.1|AV539803 AV539803 Arabidopsis thaliana roots ... 100 9e-022
ref|NM_117320.2| Arabidopsis thaliana lipid binding AT4G125... 100 1e-021
gb|BT010818.1| Arabidopsis thaliana At4g12500 mRNA, complet... 100 1e-021
gb|CB258476.1|CB258476 05-E012733-014-002-I10-T7R MPIZ-ADIS... 97 1e-021
gb|AV536403.1|AV536403 AV536403 Arabidopsis thaliana liquid... 100 1e-021
emb|BX813420.1|CNS0ADS5 Arabidopsis thaliana Full-length cD... 100 1e-021
gb|CD532388.1|CD532388 26P8 Arabidopsis Leaf Senescence Lib... 100 1e-021
gb|AV536730.1|AV536730 AV536730 Arabidopsis thaliana liquid... 97 1e-021
gb|BT015101.1| Arabidopsis thaliana At4g12500 gene, complet... 100 1e-021
emb|AX412364.1| Sequence 128 from Patent WO0222675 97 1e-021
emb|AX412548.1| Sequence 312 from Patent WO0222675 97 1e-021
emb|AX412648.1| Sequence 412 from Patent WO0222675 97 1e-021
gb|AY133654.1| Arabidopsis thaliana AT4g12480/T1P17_70 mRNA... 97 1e-021
emb|AX507405.1| Sequence 2100 from Patent WO0216655 97 1e-021
emb|AX589983.1| Sequence 165 from Patent WO02081695 97 1e-021
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 106 1e-021
>gb|CB258032.1|CB258032 78-E011804-014-004-L20-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771L204Q 5-PRIME, mRNA sequence
Length = 643
Score = 106 bits (227), Expect(2) = 1e-023
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +2 / +2
Query: 80 PTSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P +CP DALKLGVCAN+LNGL+N TLG PP PCCTLIQGLADL+AA LCT L+A
Sbjct: 293 PAMAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKA 466
Score = 25.4 bits (49), Expect(2) = 1e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +2
Query: 311 CGRRVPSGFQC 343
C ++VP GFQC
Sbjct: 524 CSKKVPRGFQC 556
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 106 bits (226), Expect(2) = 2e-023
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +2 / -1
Query: 80 PTSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P +CP DALKLGVCAN+LNGL+N TLG PP PCCTLIQGLADL+AA LCT L+A
Sbjct: 7378214 PAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKA 7378041
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / -1
Query: 311 CGRRVPSGFQC 343
C ++VP GFQC
Sbjct: 7377983 CSKKVPRGFQC 7377951
>gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis thaliana BAC T3P18 from Chromosome 1,
complete sequence
Length = 97054
Score = 106 bits (226), Expect(2) = 2e-023
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +2 / -1
Query: 80 PTSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P +CP DALKLGVCAN+LNGL+N TLG PP PCCTLIQGLADL+AA LCT L+A
Sbjct: 27886 PAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKA 27713
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / -1
Query: 311 CGRRVPSGFQC 343
C ++VP GFQC
Sbjct: 27655 CSKKVPRGFQC 27623
>ref|NM_104930.3| Arabidopsis thaliana lipid binding AT1G62510 mRNA, complete cds
Length = 821
Score = 106 bits (226), Expect(2) = 2e-023
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +2 / +3
Query: 80 PTSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P +CP DALKLGVCAN+LNGL+N TLG PP PCCTLIQGLADL+AA LCT L+A
Sbjct: 294 PAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKA 467
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 311 CGRRVPSGFQC 343
C ++VP GFQC
Sbjct: 525 CSKKVPRGFQC 557
>dbj|AK220631.1| Arabidopsis thaliana gene, similar to 14KD proline-rich protein
DC2.15 precursor (sp|P14009); similar to ESTs emb|Z17709
and emb|Z47685, complete cds, clone: RAFL21-51-F08
Length = 805
Score = 106 bits (226), Expect(2) = 2e-023
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +2 / +3
Query: 80 PTSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P +CP DALKLGVCAN+LNGL+N TLG PP PCCTLIQGLADL+AA LCT L+A
Sbjct: 267 PAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKA 440
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 311 CGRRVPSGFQC 343
C ++VP GFQC
Sbjct: 498 CSKKVPRGFQC 530
>dbj|AK221810.1| Arabidopsis thaliana mRNA for similar to 14KD proline-rich protein
DC2.15 precursor, complete cds, clone: RAFL21-88-G23
Length = 801
Score = 106 bits (226), Expect(2) = 2e-023
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +2 / +3
Query: 80 PTSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P +CP DALKLGVCAN+LNGL+N TLG PP PCCTLIQGLADL+AA LCT L+A
Sbjct: 267 PAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKA 440
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 311 CGRRVPSGFQC 343
C ++VP GFQC
Sbjct: 498 CSKKVPRGFQC 530
>dbj|AK221906.1| Arabidopsis thaliana gene, similar to 14KD proline-rich protein
DC2.15 precursor (sp|P14009); similar to ESTs emb|Z17709
and emb|Z47685, complete cds, clone: RAFL22-34-F07
Length = 800
Score = 106 bits (226), Expect(2) = 2e-023
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +2 / +3
Query: 80 PTSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P +CP DALKLGVCAN+LNGL+N TLG PP PCCTLIQGLADL+AA LCT L+A
Sbjct: 267 PAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKA 440
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 311 CGRRVPSGFQC 343
C ++VP GFQC
Sbjct: 498 CSKKVPRGFQC 530
>emb|BX817971.1|CNS0ACO0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL54ZB11 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 765
Score = 106 bits (226), Expect(2) = 2e-023
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +2 / +3
Query: 80 PTSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P +CP DALKLGVCAN+LNGL+N TLG PP PCCTLIQGLADL+AA LCT L+A
Sbjct: 246 PAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKA 419
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 311 CGRRVPSGFQC 343
C ++VP GFQC
Sbjct: 477 CSKKVPRGFQC 509
>gb|BE038366.1|BE038366 AA12E11 AA Arabidopsis thaliana cDNA 5', mRNA sequence
Length = 715
Score = 106 bits (226), Expect(2) = 2e-023
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +2 / +1
Query: 80 PTSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P +CP DALKLGVCAN+LNGL+N TLG PP PCCTLIQGLADL+AA LCT L+A
Sbjct: 247 PAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKA 420
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQC 343
C ++VP GFQC
Sbjct: 478 CSKKVPRGFQC 510
>emb|BX817278.1|CNS0ACNX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL10ZC06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 584
Score = 106 bits (226), Expect(2) = 2e-023
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +2 / +1
Query: 80 PTSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P +CP DALKLGVCAN+LNGL+N TLG PP PCCTLIQGLADL+AA LCT L+A
Sbjct: 52 PAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKA 225
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQC 343
C ++VP GFQC
Sbjct: 283 CSKKVPRGFQC 315
>gb|AV527694.1|AV527694 AV527694 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ42f12R 5', mRNA
sequence
Length = 537
Score = 106 bits (226), Expect(2) = 2e-023
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +2 / +2
Query: 80 PTSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P +CP DALKLGVCAN+LNGL+N TLG PP PCCTLIQGLADL+AA LCT L+A
Sbjct: 242 PAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKA 415
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +2
Query: 311 CGRRVPSGFQC 343
C ++VP GFQC
Sbjct: 473 CSKKVPRGFQC 505
>emb|AX506884.1| Sequence 1579 from Patent WO0216655
Length = 450
Score = 106 bits (226), Expect(2) = 2e-023
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +2 / +1
Query: 80 PTSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P +CP DALKLGVCAN+LNGL+N TLG PP PCCTLIQGLADL+AA LCT L+A
Sbjct: 184 PAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKA 357
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQC 343
C ++VP GFQC
Sbjct: 415 CSKKVPRGFQC 447
>gb|BT010488.1| Arabidopsis thaliana At1g62510 gene, complete cds
Length = 450
Score = 106 bits (226), Expect(2) = 2e-023
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +2 / +1
Query: 80 PTSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P +CP DALKLGVCAN+LNGL+N TLG PP PCCTLIQGLADL+AA LCT L+A
Sbjct: 184 PAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKA 357
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQC 343
C ++VP GFQC
Sbjct: 415 CSKKVPRGFQC 447
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 100 bits (212), Expect(2) = 7e-022
Identities = 39/57 (68%), Positives = 46/57 (80%)
Frame = +2 / -2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AAV LCT LRA
Sbjct: 3322833 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRA 3322663
Score = 100 bits (212), Expect(2) = 1e-021
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = +2 / -2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 3327372 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 3327202
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / -2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 3319374 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 3319204
Score = 30.9 bits (61), Expect(2) = 3e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 311 CGRRVPSGFQCF*SRPSIH 367
C R+VPSGFQC * ++H
Sbjct: 3319146 CNRKVPSGFQCA*RISAMH 3319090
Score = 26.3 bits (51), Expect(2) = 7e-022
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 3322605 CNRRLPSNFQC 3322573
Score = 25.8 bits (50), Expect(2) = 1e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 3327144 CNRRLPSDFQC 3327112
>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34
Length = 196107
Score = 100 bits (212), Expect(2) = 8e-022
Identities = 39/57 (68%), Positives = 46/57 (80%)
Frame = +2 / -2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AAV LCT LRA
Sbjct: 82223 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRA 82053
Score = 100 bits (212), Expect(2) = 1e-021
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = +2 / -2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 86762 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 86592
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / -2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 78764 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 78594
Score = 30.9 bits (61), Expect(2) = 3e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 311 CGRRVPSGFQCF*SRPSIH 367
C R+VPSGFQC * ++H
Sbjct: 78536 CNRKVPSGFQCA*RISAMH 78480
Score = 26.3 bits (51), Expect(2) = 8e-022
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 81995 CNRRLPSNFQC 81963
Score = 25.8 bits (50), Expect(2) = 1e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 86534 CNRRLPSDFQC 86502
>emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome 4, BAC clone T1P17 (ESSA project)
Length = 137519
Score = 100 bits (212), Expect(2) = 8e-022
Identities = 39/57 (68%), Positives = 46/57 (80%)
Frame = +2 / -3
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AAV LCT LRA
Sbjct: 77691 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRA 77521
Score = 100 bits (212), Expect(2) = 1e-021
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = +2 / -3
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 82230 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 82060
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / -3
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 74232 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 74062
Score = 30.9 bits (61), Expect(2) = 3e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 311 CGRRVPSGFQCF*SRPSIH 367
C R+VPSGFQC * ++H
Sbjct: 74004 CNRKVPSGFQCA*RISAMH 73948
Score = 26.3 bits (51), Expect(2) = 8e-022
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / -3
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 77463 CNRRLPSNFQC 77431
Score = 25.8 bits (50), Expect(2) = 1e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / -3
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 82002 CNRRLPSDFQC 81970
>ref|NM_117318.2| Arabidopsis thaliana PEARLI 1 1; lipid binding AT4G12480 (PEARLI 1
1) mRNA, complete cds
Length = 833
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 301 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 471
Score = 30.9 bits (61), Expect(2) = 3e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQCF*SRPSIH 367
C R+VPSGFQC * ++H
Sbjct: 529 CNRKVPSGFQCA*RISAMH 585
>gb|AF412111.1|AF412111 Arabidopsis thaliana AT4g12480/T1P17_70 mRNA, complete cds
Length = 830
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 301 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 471
Score = 30.9 bits (61), Expect(2) = 3e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQCF*SRPSIH 367
C R+VPSGFQC * ++H
Sbjct: 529 CNRKVPSGFQCA*RISAMH 585
>gb|L43080.1|ATHPEAR Arabidopsis thaliana pEARLI 1 mRNA, complete cds
Length = 810
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 286 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 456
Score = 30.9 bits (61), Expect(2) = 3e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQCF*SRPSIH 367
C R+VPSGFQC * ++H
Sbjct: 514 CNRKVPSGFQCA*RISAMH 570
>gb|AV824763.1|AV824763 AV824763 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-76-D14 5',
mRNA sequence
Length = 647
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 302 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 472
Score = 30.9 bits (61), Expect(2) = 3e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 311 CGRRVPSGFQCF*SRPSIH 367
C R+VPSGFQC * ++H
Sbjct: 530 CNRKVPSGFQCA*RISAMH 586
>gb|AV544210.1|AV544210 AV544210 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ36c01F 3', mRNA sequence
Length = 630
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / -2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 503 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 333
Score = 30.9 bits (61), Expect(2) = 3e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 311 CGRRVPSGFQCF*SRPSIH 367
C R+VPSGFQC * ++H
Sbjct: 275 CNRKVPSGFQCA*RISAMH 219
>gb|AV536218.1|AV536218 AV536218 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0605F 3', mRNA
sequence
Length = 605
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / -1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 533 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 363
Score = 30.9 bits (61), Expect(2) = 3e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 311 CGRRVPSGFQCF*SRPSIH 367
C R+VPSGFQC * ++H
Sbjct: 305 CNRKVPSGFQCA*RISAMH 249
>gb|AV544118.1|AV544118 AV544118 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ33g01F 3', mRNA sequence
Length = 601
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / -2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 486 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 316
Score = 30.9 bits (61), Expect(2) = 3e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 311 CGRRVPSGFQCF*SRPSIH 367
C R+VPSGFQC * ++H
Sbjct: 258 CNRKVPSGFQCA*RISAMH 202
>gb|AV537038.1|AV537038 AV537038 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0826R 5', mRNA
sequence
Length = 547
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 247 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 417
Score = 30.9 bits (61), Expect(2) = 3e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQCF*SRPSIH 367
C R+VPSGFQC * ++H
Sbjct: 475 CNRKVPSGFQCA*RISAMH 531
>gb|AI999596.1|AI999596 701556592 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701556592, mRNA sequence
Length = 533
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / -3
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 462 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 292
Score = 30.9 bits (61), Expect(2) = 3e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 311 CGRRVPSGFQCF*SRPSIH 367
C R+VPSGFQC * ++H
Sbjct: 234 CNRKVPSGFQCA*RISAMH 178
>gb|AV545232.1|AV545232 AV545232 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ76g09F 3', mRNA sequence
Length = 522
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / -2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 407 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 237
Score = 30.9 bits (61), Expect(2) = 3e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 311 CGRRVPSGFQCF*SRPSIH 367
C R+VPSGFQC * ++H
Sbjct: 179 CNRKVPSGFQCA*RISAMH 123
>gb|AV537143.1|AV537143 AV537143 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0948R 5', mRNA
sequence
Length = 487
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 52 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 222
Score = 30.9 bits (61), Expect(2) = 3e-022
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQCF*SRPSIH 367
C R+VPSGFQC * ++H
Sbjct: 280 CNRKVPSGFQCA*RISAMH 336
>ref|NM_117319.2| Arabidopsis thaliana lipid binding AT4G12490 mRNA, complete cds
Length = 786
Score = 100 bits (212), Expect(2) = 9e-022
Identities = 39/57 (68%), Positives = 46/57 (80%)
Frame = +2 / +2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AAV LCT LRA
Sbjct: 311 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRA 481
Score = 26.3 bits (51), Expect(2) = 9e-022
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / +2
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 539 CNRRLPSNFQC 571
>gb|AY052336.1| Arabidopsis thaliana AT4g12490/T1P17_80 mRNA, complete cds
Length = 771
Score = 100 bits (212), Expect(2) = 9e-022
Identities = 39/57 (68%), Positives = 46/57 (80%)
Frame = +2 / +2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AAV LCT LRA
Sbjct: 311 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRA 481
Score = 26.3 bits (51), Expect(2) = 9e-022
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / +2
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 539 CNRRLPSNFQC 571
>gb|AV536418.1|AV536418 AV536418 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII1092F 3', mRNA
sequence
Length = 617
Score = 100 bits (212), Expect(2) = 9e-022
Identities = 39/57 (68%), Positives = 46/57 (80%)
Frame = +2 / -2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AAV LCT LRA
Sbjct: 460 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRA 290
Score = 26.3 bits (51), Expect(2) = 9e-022
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 232 CNRRLPSNFQC 200
>gb|AV540262.1|AV540262 AV540262 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ147e10F 3', mRNA sequence
Length = 593
Score = 100 bits (212), Expect(2) = 9e-022
Identities = 39/57 (68%), Positives = 46/57 (80%)
Frame = +2 / -1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AAV LCT LRA
Sbjct: 476 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRA 306
Score = 26.3 bits (51), Expect(2) = 9e-022
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / -1
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 248 CNRRLPSNFQC 216
>gb|AV537263.1|AV537263 AV537263 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII1092R 5', mRNA
sequence
Length = 554
Score = 100 bits (212), Expect(2) = 9e-022
Identities = 39/57 (68%), Positives = 46/57 (80%)
Frame = +2 / +3
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AAV LCT LRA
Sbjct: 279 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRA 449
Score = 26.3 bits (51), Expect(2) = 9e-022
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 507 CNRRLPSNFQC 539
>gb|AY061906.1| Arabidopsis thaliana AT4g12490/T1P17_80 mRNA, complete cds
Length = 549
Score = 100 bits (212), Expect(2) = 9e-022
Identities = 39/57 (68%), Positives = 46/57 (80%)
Frame = +2 / +1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AAV LCT LRA
Sbjct: 283 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRA 453
Score = 26.3 bits (51), Expect(2) = 9e-022
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 511 CNRRLPSNFQC 543
>gb|AV539803.1|AV539803 AV539803 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ14b01F 3', mRNA sequence
Length = 510
Score = 100 bits (212), Expect(2) = 9e-022
Identities = 39/57 (68%), Positives = 46/57 (80%)
Frame = +2 / -3
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AAV LCT LRA
Sbjct: 394 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRA 224
Score = 26.3 bits (51), Expect(2) = 9e-022
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / -3
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 166 CNRRLPSNFQC 134
>ref|NM_117320.2| Arabidopsis thaliana lipid binding AT4G12500 mRNA, complete cds
Length = 778
Score = 100 bits (212), Expect(2) = 1e-021
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = +2 / +2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 293 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 463
Score = 25.8 bits (50), Expect(2) = 1e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / +2
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 521 CNRRLPSDFQC 553
>gb|BT010818.1| Arabidopsis thaliana At4g12500 mRNA, complete cds
Length = 752
Score = 100 bits (212), Expect(2) = 1e-021
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = +2 / +2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 293 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 463
Score = 25.8 bits (50), Expect(2) = 1e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / +2
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 521 CNRRLPSDFQC 553
>gb|CB258476.1|CB258476 05-E012733-014-002-I10-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771I102Q 5-PRIME, mRNA sequence
Length = 670
Score = 96.8 bits (205), Expect(2) = 1e-021
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +2
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 287 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 457
Score = 29.0 bits (57), Expect(2) = 1e-021
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 311 CGRRVPSGFQC 343
C R+VPSGFQC
Sbjct: 515 CNRKVPSGFQC 547
>gb|AV536403.1|AV536403 AV536403 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII1049F 3', mRNA
sequence
Length = 619
Score = 100 bits (212), Expect(2) = 1e-021
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = +2 / -3
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 473 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 303
Score = 25.8 bits (50), Expect(2) = 1e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / -3
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 245 CNRRLPSDFQC 213
>emb|BX813420.1|CNS0ADS5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB16ZE10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 592
Score = 100 bits (213), Expect(2) = 1e-021
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = +2 / +3
Query: 86 SGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
S +CP D LKLGVCAN+LNGL++ TLG PP PCC+LIQGLAD++AAV LCT L+A
Sbjct: 48 SSKCPKDTLKLGVCANVLNGLLDLTLGKPPVEPCCSLIQGLADVEAAVCLCTALKA 215
Score = 25.4 bits (49), Expect(2) = 1e-021
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 311 CGRRVPSGFQC 343
C +R+P GFQC
Sbjct: 273 CSKRLPPGFQC 305
>gb|CD532388.1|CD532388 26P8 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 564
Score = 100 bits (212), Expect(2) = 1e-021
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = +2 / -3
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 487 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 317
Score = 25.8 bits (50), Expect(2) = 1e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / -3
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 259 CNRRLPSDFQC 227
>gb|AV536730.1|AV536730 AV536730 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0475R 5', mRNA
sequence
Length = 543
Score = 96.8 bits (205), Expect(2) = 1e-021
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 280 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 450
Score = 29.0 bits (57), Expect(2) = 1e-021
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQC 343
C R+VPSGFQC
Sbjct: 508 CNRKVPSGFQC 540
>gb|BT015101.1| Arabidopsis thaliana At4g12500 gene, complete cds
Length = 534
Score = 100 bits (212), Expect(2) = 1e-021
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = +2 / +1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+GL+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 268 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 438
Score = 25.8 bits (50), Expect(2) = 1e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQC 343
C RR+PS FQC
Sbjct: 496 CNRRLPSDFQC 528
>emb|AX412364.1| Sequence 128 from Patent WO0222675
Length = 507
Score = 96.8 bits (205), Expect(2) = 1e-021
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 241 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 411
Score = 29.0 bits (57), Expect(2) = 1e-021
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQC 343
C R+VPSGFQC
Sbjct: 469 CNRKVPSGFQC 501
>emb|AX412548.1| Sequence 312 from Patent WO0222675
Length = 507
Score = 96.8 bits (205), Expect(2) = 1e-021
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 241 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 411
Score = 29.0 bits (57), Expect(2) = 1e-021
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQC 343
C R+VPSGFQC
Sbjct: 469 CNRKVPSGFQC 501
>emb|AX412648.1| Sequence 412 from Patent WO0222675
Length = 507
Score = 96.8 bits (205), Expect(2) = 1e-021
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 241 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 411
Score = 29.0 bits (57), Expect(2) = 1e-021
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQC 343
C R+VPSGFQC
Sbjct: 469 CNRKVPSGFQC 501
>gb|AY133654.1| Arabidopsis thaliana AT4g12480/T1P17_70 mRNA, complete cds
Length = 507
Score = 96.8 bits (205), Expect(2) = 1e-021
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 241 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 411
Score = 29.0 bits (57), Expect(2) = 1e-021
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQC 343
C R+VPSGFQC
Sbjct: 469 CNRKVPSGFQC 501
>emb|AX507405.1| Sequence 2100 from Patent WO0216655
Length = 507
Score = 96.8 bits (205), Expect(2) = 1e-021
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 241 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 411
Score = 29.0 bits (57), Expect(2) = 1e-021
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQC 343
C R+VPSGFQC
Sbjct: 469 CNRKVPSGFQC 501
>emb|AX589983.1| Sequence 165 from Patent WO02081695
Length = 507
Score = 96.8 bits (205), Expect(2) = 1e-021
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +1
Query: 83 TSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
+SG CP+DAL+LGVCAN+L+ L+N LG P PCC+LIQGL DL AA+ LCT LRA
Sbjct: 241 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRA 411
Score = 29.0 bits (57), Expect(2) = 1e-021
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 311 CGRRVPSGFQC 343
C R+VPSGFQC
Sbjct: 469 CNRKVPSGFQC 501
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 106 bits (226), Expect = 1e-021
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +2 / -3
Query: 80 PTSGRCPVDALKLGVCANLLNGLINATLGTPPRTPCCTLIQGLADLKAAVGLCTVLRA 253
P +CP DALKLGVCAN+LNGL+N TLG PP PCCTLIQGLADL+AA LCT L+A
Sbjct: 23140563 PAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKA 23140390
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,520,325,986
Number of Sequences: 1013581
Number of extensions: 19246219
Number of successful extensions: 251122
Number of sequences better than 1.0e-020: 57
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 66696079056
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)