TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2418946.2.2
(710 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTH... 280 3e-074
emb|AX651854.1| Sequence 720 from Patent WO03000898 143 2e-069
emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome... 143 4e-069
ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHA... 256 9e-068
gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthas... 256 9e-068
emb|AX412747.1| Sequence 511 from Patent WO0222675 256 9e-068
emb|AX508002.1| Sequence 2697 from Patent WO0216655 256 9e-068
dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for put... 247 4e-064
ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTH... 247 4e-064
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 143 3e-062
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 143 3e-062
gb|AQ959103.1|AQ959103 LEREH30TRB LERE Arabidopsis thaliana... 135 5e-059
gb|CW796846.1|CW796846 WiscDsLox468C6 Arabidopsis thaliana ... 143 1e-058
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 132 7e-058
gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis tha... 132 7e-058
emb|AX441264.1| Sequence 18 from Patent EP1209228 132 8e-058
dbj|BD181338.1| A stress-responsive promoter 132 8e-058
emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cD... 224 2e-057
gb|AV546514.1|AV546514 AV546514 Arabidopsis thaliana roots ... 222 7e-057
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 132 2e-056
gb|AQ959101.1|AQ959101 LEREH30TFB LERE Arabidopsis thaliana... 118 3e-056
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 132 2e-054
ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTH... 204 2e-053
gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J... 202 1e-052
gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F... 202 1e-052
gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, ... 202 1e-052
tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase ... 202 1e-052
ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synth... 202 1e-052
gb|AI996136.1|AI996136 701550178 A. thaliana, Columbia Col-... 207 4e-052
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 202 9e-051
ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTH... 193 4e-049
gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D... 133 4e-048
gb|AV535768.1|AV535768 AV535768 Arabidopsis thaliana flower... 170 5e-048
ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTH... 185 1e-045
gb|AV534683.1|AV534683 AV534683 Arabidopsis thaliana flower... 179 9e-044
ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTH... 171 2e-043
gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis tha... 102 3e-040
gb|AV523506.1|AV523506 AV523506 Arabidopsis thaliana aboveg... 159 1e-037
gb|AY099734.1| Arabidopsis thaliana putative glucan synthas... 159 1e-037
gb|BT000346.1| Arabidopsis thaliana putative glucan synthas... 159 1e-037
dbj|AK221151.1| Arabidopsis thaliana mRNA for putative gluc... 159 1e-037
ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTH... 159 1e-037
emb|BX825904.1|CNS0A6G3 Arabidopsis thaliana Full-length cD... 158 2e-037
gb|AY085106.1| Arabidopsis thaliana clone 12977 mRNA, compl... 155 1e-036
gb|AI995793.1|AI995793 701548593 A. thaliana, Columbia Col-... 148 2e-034
dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosom... 103 2e-033
gb|B27162.1|B27162 T2A17TR TAMU Arabidopsis thaliana genomi... 85 2e-032
ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTH... 135 6e-032
gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 138 1e-031
emb|AX059538.1| Sequence 271 from Patent WO0055325 138 1e-031
gb|AY050990.1| Arabidopsis thaliana putative glucan synthas... 138 1e-031
gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis tha... 138 1e-031
gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8... 138 1e-031
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 138 1e-031
emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosom... 138 1e-031
ref|NM_116736.1| Arabidopsis thaliana ATGSL1 (GLUCAN SYNTHA... 138 1e-031
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 138 1e-031
gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome II... 93 2e-031
gb|AQ959100.1|AQ959100 LEREH30TF LERE Arabidopsis thaliana ... 118 4e-031
gb|AQ959102.1|AQ959102 LEREH30TR LERE Arabidopsis thaliana ... 135 1e-030
emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome... 83 1e-029
gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromoso... 83 1e-029
gb|AF071527.1| Arabidopsis thaliana BAC F9H3, from chromoso... 83 1e-029
ref|NM_116593.3| Arabidopsis thaliana ATGSL05 (GLUCAN SYNTH... 83 1e-029
emb|AX506240.1| Sequence 935 from Patent WO0216655 83 1e-029
gb|AQ957761.1|AQ957761 LERAR55TF LERA Arabidopsis thaliana ... 131 3e-029
gb|AU228526.1|AU228526 AU228526 RAFL16 Arabidopsis thaliana... 110 2e-028
dbj|AB023038.1| Arabidopsis thaliana genomic DNA, chromosom... 82 2e-028
emb|BX572740.1| Arabidopsis thaliana transposon insertion S... 117 4e-025
gb|CL499023.1|CL499023 SAIL_662_E12.v2 SAIL Collection Arab... 113 5e-024
emb|BX824879.1|CNS0A7RK Arabidopsis thaliana Full-length cD... 111 2e-023
emb|AL759226.1| Arabidopsis thaliana T-DNA flanking sequenc... 103 7e-021
>ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTHASE-LIKE 12);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT5G13000 (ATGSL12) mRNA, complete cds
Length = 6194
Score = 280 bits (606), Expect = 3e-074
Identities = 117/163 (71%), Positives = 135/163 (82%)
Frame = +3 / +3
Query: 78 LVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMT 257
+VY SW+VIF+IL VMKTVSVGRRRFSA FQL+FRLIKGLIF+TF AI+VILI + MT
Sbjct: 5556 VVYGVSWLVIFLILFVMKTVSVGRRRFSASFQLMFRLIKGLIFMTFIAIIVILITLAHMT 5735
Query: 258 VLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFL 437
+ DI VCILAFMPTGWG+ A +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFL
Sbjct: 5736 IQDIIVCILAFMPTGWGMLLIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFL 5915
Query: 438 AXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
A FVSEFQTRMLFNQAFS GLQISRI GH+KD + NKE*
Sbjct: 5916 AWFPFVSEFQTRMLFNQAFSRGLQISRILGGHRKDRSSRNKE* 6044
Score = 164 bits (352), Expect = 3e-039
Identities = 83/163 (50%), Positives = 97/163 (59%)
Frame = -2 / -2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF S P IREI RPLL A L SI VWNSDTN A+ A GVN
Sbjct: 6043 HSLFREERSLR*PPRIREI*RPLLKA*LKSIRVWNSDTNGNHAKNATGVNSNSPITISYP 5864
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
L +PQ+P L TG A I P PVG+KAR+ T MS VM I IT +A+NV+
Sbjct: 5863 RARVLTDPQNPAL*TTGLHACAIKSIPQPVGIKARIHTIMSCIVM*ASVINITIIAINVM 5684
Query: 205 NIRPLINRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TS 77
NI P INRN S ALNL LPT+TVFIT+ I KIT+H+ *T+
Sbjct: 5683 NISPFINRNIS*KLALNLRLPTETVFITNNIKKITSHDTP*TT 5555
>emb|AX651854.1| Sequence 720 from Patent WO03000898
Length = 5892
Score = 143 bits (306), Expect(2) = 2e-069
Identities = 58/80 (72%), Positives = 67/80 (83%)
Frame = +3 / +1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GL
Sbjct: 5653 ACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 5832
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GH+KD + NKE*
Sbjct: 5833 QISRILGGHRKDRSSRNKE* 5892
Score = 142 bits (304), Expect(2) = 2e-069
Identities = 59/78 (75%), Positives = 68/78 (87%)
Frame = +3 / +2
Query: 78 LVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMT 257
+VY SW+VIF+IL VMKTVSVGRRRFSA FQL+FRLIKGLIF+TF AI+VILI + MT
Sbjct: 5414 VVYGVSWLVIFLILFVMKTVSVGRRRFSASFQLMFRLIKGLIFMTFIAIIVILITLAHMT 5593
Query: 258 VLDIFVCILAFMPTGWGL 311
+ DI VCILAFMPTGWG+
Sbjct: 5594 IQDIIVCILAFMPTGWGM 5647
Score = 98.7 bits (209), Expect(2) = 2e-034
Identities = 45/77 (58%), Positives = 55/77 (71%)
Frame = -2 / -1
Query: 307 PHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTVF 128
P PVG+KAR+ T MS VM I IT +A+NV+NI P INRN S ALNL LPT+TVF
Sbjct: 5643 PQPVGIKARIHTIMSCIVM*ASVINITIIAINVMNISPFINRNIS*KLALNLRLPTETVF 5464
Query: 127 ITSKITKITTHEKQ*TS 77
IT+ I KIT+H+ *T+
Sbjct: 5463 ITNNIKKITSHDTP*TT 5413
Score = 69.8 bits (146), Expect(2) = 2e-034
Identities = 36/77 (46%), Positives = 40/77 (51%)
Frame = -2 / -2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF S P IREI RPLL A L SI VWNSDTN A+ A GVN
Sbjct: 5891 HSLFREERSLR*PPRIREI*RPLLKA*LKSIRVWNSDTNGNHAKNATGVNSNSPITISYP 5712
Query: 385 XXXALIEPQSPVLWITG 335
L +PQ+P L TG
Sbjct: 5711 RARVLTDPQNPAL*TTG 5661
>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project)
Length = 90020
Score = 143 bits (306), Expect(4) = 4e-069
Identities = 58/80 (72%), Positives = 67/80 (83%)
Frame = +3 / -1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GL
Sbjct: 62501 ACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 62322
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GH+KD + NKE*
Sbjct: 62321 QISRILGGHRKDRSSRNKE* 62262
Score = 118 bits (252), Expect(4) = 4e-069
Identities = 48/68 (70%), Positives = 58/68 (85%)
Frame = +3 / -1
Query: 108 FVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILA 287
F ++ + +TVSVGRRRFSA FQL+FRLIKGLIF+TF AI+VILI + MT+ DI VCILA
Sbjct: 62819 FFVVCLSQTVSVGRRRFSASFQLMFRLIKGLIFMTFIAIIVILITLAHMTIQDIIVCILA 62640
Query: 288 FMPTGWGL 311
FMPTGWG+
Sbjct: 62639 FMPTGWGM 62616
Score = 76.2 bits (160), Expect(3) = 4e-030
Identities = 35/59 (59%), Positives = 41/59 (69%)
Frame = -2 / +1
Query: 307 PHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
P PVG+KAR+ T MS VM I IT +A+NV+NI P INRN S ALNL LPT+TV
Sbjct: 62620 PQPVGIKARIHTIMSCIVM*ASVINITIIAINVMNISPFINRNIS*KLALNLRLPTETV 62796
Score = 70.3 bits (147), Expect(3) = 4e-030
Identities = 38/83 (45%), Positives = 42/83 (50%)
Frame = -2 / +1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF S P IREI RPLL A L SI VWNSDTN A+ A GVN
Sbjct: 62263 HSLFREERSLR*PPRIREI*RPLLKA*LKSIRVWNSDTNGNHAKNATGVNSNSPITISYP 62442
Query: 385 XXXALIEPQSPVLWITGRIAXXI 317
L +PQ+P L TG A I
Sbjct: 62443 RARVLTDPQNPAL*TTGLHACAI 62511
Score = 31.3 bits (62), Expect(4) = 4e-069
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3 / -1
Query: 72 SVLVYCFSWVVIFVILLVMK 131
S VY SW+VIF+IL VMK
Sbjct: 62942 STQVYGVSWLVIFLILFVMK 62883
Score = 28.6 bits (56), Expect(4) = 4e-069
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3 / -3
Query: 15 RYGLVYHLNITKK 53
+YGLVYHL IT+K
Sbjct: 63066 QYGLVYHLTITEK 63028
Score = 24.9 bits (48), Expect(3) = 4e-030
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / +1
Query: 130 FITSKITKITTHEKQ*T 80
FIT+ I KIT+H+ *T
Sbjct: 62884 FITNNIKKITSHDTP*T 62934
>ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHASE 1); transferase,
transferring glycosyl groups AT1G05570 (CALS1) mRNA,
complete cds
Length = 6022
Score = 256 bits (554), Expect(2) = 9e-068
Identities = 104/167 (62%), Positives = 131/167 (78%)
Frame = +3 / +1
Query: 66 NQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAI 245
NQS VY SW VI ILL++K + VGRRRFS FQL+FR+IKGL+F+TF AI++ +A+
Sbjct: 5362 NQSFWVYGASWFVILFILLIVKGLGVGRRRFSTNFQLLFRIIKGLVFLTFVAILITFLAL 5541
Query: 246 PGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 425
P +T+ D+F+C+LAFMPTGWG+ A +P+I + G+W S++ LARGYEI+MGLLLFTP
Sbjct: 5542 PLITIKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTP 5721
Query: 426 IAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 5722 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5862
Score = 164 bits (353), Expect = 2e-039
Identities = 79/165 (47%), Positives = 91/165 (55%)
Frame = -2 / -3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IREICRPLL AWL SILVWNSDT QA+ A GVN
Sbjct: 5861 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 5682
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
L + P WI G A + PHPVGMKA MQ N S V+ G A ++ +A NV
Sbjct: 5681 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQMNKSLIVIRGSARKVMRIATNVR 5502
Query: 205 NIRPLINRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTL 71
N RP + N SW LNL LPT F S++ KIT H+ *T L
Sbjct: 5501 NTRPFMILNRSWKFVLNLRLPTPKPFTISRMNKITNHDAP*TQKL 5367
Score = 23.1 bits (44), Expect(2) = 9e-068
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITK 50
+YGLVYHL+ K
Sbjct: 5320 QYGLVYHLSTFK 5355
>gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthase 1 catalytic subunit (CalS1)
mRNA, complete cds
Length = 6007
Score = 256 bits (554), Expect(2) = 9e-068
Identities = 104/167 (62%), Positives = 131/167 (78%)
Frame = +3 / +1
Query: 66 NQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAI 245
NQS VY SW VI ILL++K + VGRRRFS FQL+FR+IKGL+F+TF AI++ +A+
Sbjct: 5362 NQSFWVYGASWFVILFILLIVKGLGVGRRRFSTNFQLLFRIIKGLVFLTFVAILITFLAL 5541
Query: 246 PGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 425
P +T+ D+F+C+LAFMPTGWG+ A +P+I + G+W S++ LARGYEI+MGLLLFTP
Sbjct: 5542 PLITIKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTP 5721
Query: 426 IAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 5722 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5862
Score = 164 bits (353), Expect = 2e-039
Identities = 79/165 (47%), Positives = 91/165 (55%)
Frame = -2 / -3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IREICRPLL AWL SILVWNSDT QA+ A GVN
Sbjct: 5861 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 5682
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
L + P WI G A + PHPVGMKA MQ N S V+ G A ++ +A NV
Sbjct: 5681 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQMNKSLIVIRGSARKVMRIATNVR 5502
Query: 205 NIRPLINRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTL 71
N RP + N SW LNL LPT F S++ KIT H+ *T L
Sbjct: 5501 NTRPFMILNRSWKFVLNLRLPTPKPFTISRMNKITNHDAP*TQKL 5367
Score = 23.1 bits (44), Expect(2) = 9e-068
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITK 50
+YGLVYHL+ K
Sbjct: 5320 QYGLVYHLSTFK 5355
>emb|AX412747.1| Sequence 511 from Patent WO0222675
Length = 5577
Score = 256 bits (554), Expect(2) = 9e-068
Identities = 104/167 (62%), Positives = 131/167 (78%)
Frame = +3 / +1
Query: 66 NQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAI 245
NQS VY SW VI ILL++K + VGRRRFS FQL+FR+IKGL+F+TF AI++ +A+
Sbjct: 5077 NQSFWVYGASWFVILFILLIVKGLGVGRRRFSTNFQLLFRIIKGLVFLTFVAILITFLAL 5256
Query: 246 PGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 425
P +T+ D+F+C+LAFMPTGWG+ A +P+I + G+W S++ LARGYEI+MGLLLFTP
Sbjct: 5257 PLITIKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTP 5436
Query: 426 IAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 5437 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5577
Score = 164 bits (353), Expect = 2e-039
Identities = 79/165 (47%), Positives = 91/165 (55%)
Frame = -2 / -2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IREICRPLL AWL SILVWNSDT QA+ A GVN
Sbjct: 5576 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 5397
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
L + P WI G A + PHPVGMKA MQ N S V+ G A ++ +A NV
Sbjct: 5396 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQMNKSLIVIRGSARKVMRIATNVR 5217
Query: 205 NIRPLINRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTL 71
N RP + N SW LNL LPT F S++ KIT H+ *T L
Sbjct: 5216 NTRPFMILNRSWKFVLNLRLPTPKPFTISRMNKITNHDAP*TQKL 5082
Score = 23.1 bits (44), Expect(2) = 9e-068
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITK 50
+YGLVYHL+ K
Sbjct: 5035 QYGLVYHLSTFK 5070
>emb|AX508002.1| Sequence 2697 from Patent WO0216655
Length = 5577
Score = 256 bits (554), Expect(2) = 9e-068
Identities = 104/167 (62%), Positives = 131/167 (78%)
Frame = +3 / +1
Query: 66 NQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAI 245
NQS VY SW VI ILL++K + VGRRRFS FQL+FR+IKGL+F+TF AI++ +A+
Sbjct: 5077 NQSFWVYGASWFVILFILLIVKGLGVGRRRFSTNFQLLFRIIKGLVFLTFVAILITFLAL 5256
Query: 246 PGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 425
P +T+ D+F+C+LAFMPTGWG+ A +P+I + G+W S++ LARGYEI+MGLLLFTP
Sbjct: 5257 PLITIKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTP 5436
Query: 426 IAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 5437 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5577
Score = 164 bits (353), Expect = 2e-039
Identities = 79/165 (47%), Positives = 91/165 (55%)
Frame = -2 / -2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IREICRPLL AWL SILVWNSDT QA+ A GVN
Sbjct: 5576 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 5397
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
L + P WI G A + PHPVGMKA MQ N S V+ G A ++ +A NV
Sbjct: 5396 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQMNKSLIVIRGSARKVMRIATNVR 5217
Query: 205 NIRPLINRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTL 71
N RP + N SW LNL LPT F S++ KIT H+ *T L
Sbjct: 5216 NTRPFMILNRSWKFVLNLRLPTPKPFTISRMNKITNHDAP*TQKL 5082
Score = 23.1 bits (44), Expect(2) = 9e-068
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITK 50
+YGLVYHL+ K
Sbjct: 5035 QYGLVYHLSTFK 5070
>dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for putative glucan synthase,
complete cds, clone: RAFL16-92-B13
Length = 2390
Score = 247 bits (533), Expect = 4e-064
Identities = 100/169 (59%), Positives = 129/169 (76%)
Frame = +3 / +3
Query: 60 KDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILI 239
++NQS+ +Y SW VI ILL++K + VGR+RFS FQL+FR+IKG +F+TF +++ +
Sbjct: 1764 QENQSLWIYGASWFVILFILLIVKGLGVGRQRFSTNFQLLFRIIKGFVFLTFLGLLITFL 1943
Query: 240 AIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLF 419
A+ +T DIF+C+LAFMPTGWG+ A +P+I + G W S++ LARGYEILMGLLLF
Sbjct: 1944 ALRFLTPKDIFLCMLAFMPTGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLF 2123
Query: 420 TPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
TP+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 2124 TPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 2270
Score = 138 bits (295), Expect = 2e-031
Identities = 73/158 (46%), Positives = 83/158 (52%)
Frame = -2 / -2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IREIC PLLNAWL SILV NSDTN QAR A GVN
Sbjct: 2269 HSLFLEERSFL*PPRIREICNPLLNAWLKSILV*NSDTNGNQARNATGVNKSKPMRIS*P 2090
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
L + Q+P I G A + P PVGMKA +Q MS V A ++ NV
Sbjct: 2089 RASVLTDDQNPSR*IRGLHACAMSNIPQPVGMKASIQRKMSLGVKKRRAKKVMRSPRNVR 1910
Query: 205 NIRPLINRNTSWNSALNLLLPTDTVFITSKITKITTHE 92
N +PL+ SW LN LPT F SK+ KIT HE
Sbjct: 1909 NTKPLMILKRSWKFVLNRCLPTPRPFTISKMNKITNHE 1796
>ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTHASE-LIKE 3);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G31960 (ATGSL03) mRNA, complete cds
Length = 5880
Score = 247 bits (533), Expect = 4e-064
Identities = 100/169 (59%), Positives = 129/169 (76%)
Frame = +3 / +1
Query: 60 KDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILI 239
++NQS+ +Y SW VI ILL++K + VGR+RFS FQL+FR+IKG +F+TF +++ +
Sbjct: 5374 QENQSLWIYGASWFVILFILLIVKGLGVGRQRFSTNFQLLFRIIKGFVFLTFLGLLITFL 5553
Query: 240 AIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLF 419
A+ +T DIF+C+LAFMPTGWG+ A +P+I + G W S++ LARGYEILMGLLLF
Sbjct: 5554 ALRFLTPKDIFLCMLAFMPTGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLF 5733
Query: 420 TPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
TP+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 5734 TPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5880
Score = 138 bits (295), Expect = 2e-031
Identities = 73/158 (46%), Positives = 83/158 (52%)
Frame = -2 / -2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IREIC PLLNAWL SILV NSDTN QAR A GVN
Sbjct: 5879 HSLFLEERSFL*PPRIREICNPLLNAWLKSILV*NSDTNGNQARNATGVNKSKPMRIS*P 5700
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
L + Q+P I G A + P PVGMKA +Q MS V A ++ NV
Sbjct: 5699 RASVLTDDQNPSR*IRGLHACAMSNIPQPVGMKASIQRKMSLGVKKRRAKKVMRSPRNVR 5520
Query: 205 NIRPLINRNTSWNSALNLLLPTDTVFITSKITKITTHE 92
N +PL+ SW LN LPT F SK+ KIT HE
Sbjct: 5519 NTKPLMILKRSWKFVLNRCLPTPRPFTISKMNKITNHE 5406
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 143 bits (306), Expect(2) = 3e-062
Identities = 58/80 (72%), Positives = 67/80 (83%)
Frame = +3 / -1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GL
Sbjct: 4110687 ACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 4110508
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GH+KD + NKE*
Sbjct: 4110507 QISRILGGHRKDRSSRNKE* 4110448
Score = 118 bits (252), Expect(2) = 3e-062
Identities = 48/68 (70%), Positives = 58/68 (85%)
Frame = +3 / -1
Query: 108 FVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILA 287
F ++ + +TVSVGRRRFSA FQL+FRLIKGLIF+TF AI+VILI + MT+ DI VCILA
Sbjct: 4111005 FFVVCLSQTVSVGRRRFSASFQLMFRLIKGLIFMTFIAIIVILITLAHMTIQDIIVCILA 4110826
Query: 288 FMPTGWGL 311
FMPTGWG+
Sbjct: 4110825 FMPTGWGM 4110802
Score = 103 bits (219), Expect = 7e-021
Identities = 43/78 (55%), Positives = 56/78 (71%)
Frame = +3 / +3
Query: 333 RPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQI 512
+P+I + G+W + LA Y+++MG LLF PIAF+A F+SEFQTRMLFNQAFS GL I
Sbjct: 14550927 KPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHI 14551106
Query: 513 SRIXXGHKKDXXTXNKE* 566
SRI G +K + NK+*
Sbjct: 14551107 SRILSGQRKHRSSKNKD* 14551160
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 143 bits (306), Expect(2) = 3e-062
Identities = 58/80 (72%), Positives = 67/80 (83%)
Frame = +3 / -3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GL
Sbjct: 3923660 ACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 3923481
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GH+KD + NKE*
Sbjct: 3923480 QISRILGGHRKDRSSRNKE* 3923421
Score = 118 bits (252), Expect(2) = 3e-062
Identities = 48/68 (70%), Positives = 58/68 (85%)
Frame = +3 / -3
Query: 108 FVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILA 287
F ++ + +TVSVGRRRFSA FQL+FRLIKGLIF+TF AI+VILI + MT+ DI VCILA
Sbjct: 3923978 FFVVCLSQTVSVGRRRFSASFQLMFRLIKGLIFMTFIAIIVILITLAHMTIQDIIVCILA 3923799
Query: 288 FMPTGWGL 311
FMPTGWG+
Sbjct: 3923798 FMPTGWGM 3923775
Score = 103 bits (219), Expect = 7e-021
Identities = 43/78 (55%), Positives = 56/78 (71%)
Frame = +3 / +3
Query: 333 RPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQI 512
+P+I + G+W + LA Y+++MG LLF PIAF+A F+SEFQTRMLFNQAFS GL I
Sbjct: 13467072 KPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHI 13467251
Query: 513 SRIXXGHKKDXXTXNKE* 566
SRI G +K + NK+*
Sbjct: 13467252 SRILSGQRKHRSSKNKD* 13467305
>gb|AQ959103.1|AQ959103 LEREH30TRB LERE Arabidopsis thaliana genomic clone LEREH30, DNA
sequence
Length = 538
Score = 135 bits (290), Expect(2) = 5e-059
Identities = 54/72 (75%), Positives = 62/72 (86%)
Frame = +3 / -3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GL
Sbjct: 233 ACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 54
Query: 507 QISRIXXGHKKD 542
QISRI GH+KD
Sbjct: 53 QISRILGGHRKD 18
Score = 114 bits (244), Expect(2) = 5e-059
Identities = 47/61 (77%), Positives = 54/61 (88%)
Frame = +3 / -3
Query: 129 KTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWG 308
+TVSVGRRRFSA FQL+FRLIKGLIF+TF AI+VILI + MT+ DI VCILAFMPTGWG
Sbjct: 530 QTVSVGRRRFSASFQLMFRLIKGLIFMTFIAIIVILITLAHMTIQDIIVCILAFMPTGWG 351
Query: 309 L 311
+
Sbjct: 350 M 348
Score = 76.2 bits (160), Expect(2) = 1e-026
Identities = 35/59 (59%), Positives = 41/59 (69%)
Frame = -2 / +1
Query: 307 PHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
P PVG+KAR+ T MS VM I IT +A+NV+NI P INRN S ALNL LPT+TV
Sbjct: 352 PQPVGIKARIHTIMSCIVM*ASVINITIIAINVMNISPFINRNIS*KLALNLRLPTETV 528
Score = 66.1 bits (138), Expect(2) = 1e-026
Identities = 34/71 (47%), Positives = 37/71 (52%)
Frame = -2 / +1
Query: 529 PXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXXXXXALIEPQSPV 350
P IREI RPLL A L SI VWNSDTN A+ A GVN L +PQ+P
Sbjct: 31 PPRIREI*RPLLKA*LKSIRVWNSDTNGNHAKNATGVNSNSPITISYPRARVLTDPQNPA 210
Query: 349 LWITGRIAXXI 317
L TG A I
Sbjct: 211 L*TTGLHACAI 243
>gb|CW796846.1|CW796846 WiscDsLox468C6 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 751
Score = 143 bits (306), Expect(2) = 1e-058
Identities = 58/80 (72%), Positives = 67/80 (83%)
Frame = +3 / -2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GL
Sbjct: 264 ACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 85
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI GH+KD + NKE*
Sbjct: 84 QISRILGGHRKDRSSRNKE* 25
Score = 106 bits (226), Expect(2) = 1e-058
Identities = 44/68 (64%), Positives = 54/68 (79%)
Frame = +3 / -2
Query: 108 FVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILA 287
F ++ + +TVSVGRRRFSA FQL+FR IKGLIF+TF AI+VILI + MT+ DI ILA
Sbjct: 582 FFVVCLSQTVSVGRRRFSASFQLMFRXIKGLIFMTFIAIIVILIXLAHMTIQDIIXXILA 403
Query: 288 FMPTGWGL 311
FMP GWG+
Sbjct: 402 FMPXGWGM 379
Score = 70.3 bits (147), Expect(2) = 2e-025
Identities = 38/83 (45%), Positives = 42/83 (50%)
Frame = -2 / +2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF S P IREI RPLL A L SI VWNSDTN A+ A GVN
Sbjct: 26 HSLFREERSLR*PPRIREI*RPLLKA*LKSIRVWNSDTNGNHAKNATGVNSNSPITISYP 205
Query: 385 XXXALIEPQSPVLWITGRIAXXI 317
L +PQ+P L TG A I
Sbjct: 206 RARVLTDPQNPAL*TTGLHACAI 274
Score = 68.0 bits (142), Expect(2) = 2e-025
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = -2 / +2
Query: 307 PHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
P P G+KAR+ MS VM I IT +A+NV+NI P I RN S ALNL LPT+TV
Sbjct: 383 PQPXGIKARIXXIMSCIVM*ASXINITIIAINVMNISPFIXRNIS*KLALNLRLPTETV 559
>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete
sequence
Length = 103223
Score = 132 bits (282), Expect(4) = 7e-058
Identities = 55/80 (68%), Positives = 65/80 (81%)
Frame = +3 / -3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+I + G+W S++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GL
Sbjct: 29643 ACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 29464
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI G +KD + NKE*
Sbjct: 29463 QISRILGGQRKDRSSKNKE* 29404
Score = 103 bits (219), Expect(4) = 7e-058
Identities = 36/62 (58%), Positives = 53/62 (85%)
Frame = +3 / -1
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++ + VGRRRFS FQL+FR+IKGL+F+TF AI++ +A+P +T+ D+F+C+LAFMPTGW
Sbjct: 29942 LQGLGVGRRRFSTNFQLLFRIIKGLVFLTFVAILITFLALPLITIKDLFICMLAFMPTGW 29763
Query: 306 GL 311
G+
Sbjct: 29762 GM 29757
Score = 85.4 bits (180), Expect(2) = 5e-030
Identities = 41/83 (49%), Positives = 44/83 (53%)
Frame = -2 / +2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IREICRPLL AWL SILVWNSDT QA+ A GVN
Sbjct: 29405 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 29584
Query: 385 XXXALIEPQSPVLWITGRIAXXI 317
L + P WI G A I
Sbjct: 29585 RASVLTDDHIPSCWIRGLHACAI 29653
Score = 68.0 bits (142), Expect(2) = 5e-030
Identities = 30/56 (53%), Positives = 35/56 (62%)
Frame = -2 / +1
Query: 307 PHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPT 140
PHPVGMKA MQ N S V+ G A ++ +A NV N RP + N SW LNL LPT
Sbjct: 29761 PHPVGMKASMQMNKSLIVIRGSARKVMRIATNVRNTRPFMILNRSWKFVLNLRLPT 29928
Score = 24.9 bits (48), Expect(4) = 7e-058
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3 / -2
Query: 81 VYCFSWVVIFVILLVMK 131
VY SW VI ILL++K
Sbjct: 30073 VYGASWFVILFILLIVK 30023
Score = 23.1 bits (44), Expect(4) = 7e-058
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / -1
Query: 15 RYGLVYHLNITK 50
+YGLVYHL+ K
Sbjct: 30206 QYGLVYHLSTFK 30171
>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I,
complete sequence
Length = 84203
Score = 132 bits (282), Expect(4) = 7e-058
Identities = 55/80 (68%), Positives = 65/80 (81%)
Frame = +3 / -1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+I + G+W S++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GL
Sbjct: 80192 ACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 80013
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI G +KD + NKE*
Sbjct: 80012 QISRILGGQRKDRSSKNKE* 79953
Score = 103 bits (219), Expect(4) = 7e-058
Identities = 36/62 (58%), Positives = 53/62 (85%)
Frame = +3 / -2
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++ + VGRRRFS FQL+FR+IKGL+F+TF AI++ +A+P +T+ D+F+C+LAFMPTGW
Sbjct: 80491 LQGLGVGRRRFSTNFQLLFRIIKGLVFLTFVAILITFLALPLITIKDLFICMLAFMPTGW 80312
Query: 306 GL 311
G+
Sbjct: 80311 GM 80306
Score = 85.4 bits (180), Expect(2) = 5e-030
Identities = 41/83 (49%), Positives = 44/83 (53%)
Frame = -2 / +1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IREICRPLL AWL SILVWNSDT QA+ A GVN
Sbjct: 79954 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 80133
Query: 385 XXXALIEPQSPVLWITGRIAXXI 317
L + P WI G A I
Sbjct: 80134 RASVLTDDHIPSCWIRGLHACAI 80202
Score = 68.0 bits (142), Expect(2) = 5e-030
Identities = 30/56 (53%), Positives = 35/56 (62%)
Frame = -2 / +3
Query: 307 PHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPT 140
PHPVGMKA MQ N S V+ G A ++ +A NV N RP + N SW LNL LPT
Sbjct: 80310 PHPVGMKASMQMNKSLIVIRGSARKVMRIATNVRNTRPFMILNRSWKFVLNLRLPT 80477
Score = 24.9 bits (48), Expect(4) = 7e-058
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3 / -3
Query: 81 VYCFSWVVIFVILLVMK 131
VY SW VI ILL++K
Sbjct: 80622 VYGASWFVILFILLIVK 80572
Score = 23.1 bits (44), Expect(4) = 7e-058
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / -2
Query: 15 RYGLVYHLNITK 50
+YGLVYHL+ K
Sbjct: 80755 QYGLVYHLSTFK 80720
>emb|AX441264.1| Sequence 18 from Patent EP1209228
Length = 2000
Score = 132 bits (282), Expect(4) = 8e-058
Identities = 55/80 (68%), Positives = 65/80 (81%)
Frame = +3 / +2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+I + G+W S++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GL
Sbjct: 1115 ACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 1294
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI G +KD + NKE*
Sbjct: 1295 QISRILGGQRKDRSSKNKE* 1354
Score = 103 bits (219), Expect(4) = 8e-058
Identities = 36/62 (58%), Positives = 53/62 (85%)
Frame = +3 / +3
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++ + VGRRRFS FQL+FR+IKGL+F+TF AI++ +A+P +T+ D+F+C+LAFMPTGW
Sbjct: 816 LQGLGVGRRRFSTNFQLLFRIIKGLVFLTFVAILITFLALPLITIKDLFICMLAFMPTGW 995
Query: 306 GL 311
G+
Sbjct: 996 GM 1001
Score = 85.4 bits (180), Expect(3) = 2e-030
Identities = 41/83 (49%), Positives = 44/83 (53%)
Frame = -2 / -3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IREICRPLL AWL SILVWNSDT QA+ A GVN
Sbjct: 1353 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 1174
Query: 385 XXXALIEPQSPVLWITGRIAXXI 317
L + P WI G A I
Sbjct: 1173 RASVLTDDHIPSCWIRGLHACAI 1105
Score = 68.0 bits (142), Expect(3) = 2e-030
Identities = 30/56 (53%), Positives = 35/56 (62%)
Frame = -2 / -2
Query: 307 PHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPT 140
PHPVGMKA MQ N S V+ G A ++ +A NV N RP + N SW LNL LPT
Sbjct: 997 PHPVGMKASMQMNKSLIVIRGSARKVMRIATNVRNTRPFMILNRSWKFVLNLRLPT 830
Score = 24.9 bits (48), Expect(3) = 2e-030
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 147 CPLIRSS*RAKSQKLQPMRSNKPAH 73
CP+I + K+++++ RS +P H
Sbjct: 395 CPVINNLLPLKTRRIEKERSKEPCH 321
Score = 24.9 bits (48), Expect(4) = 8e-058
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3 / +1
Query: 81 VYCFSWVVIFVILLVMK 131
VY SW VI ILL++K
Sbjct: 685 VYGASWFVILFILLIVK 735
Score = 23.1 bits (44), Expect(4) = 8e-058
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 15 RYGLVYHLNITK 50
+YGLVYHL+ K
Sbjct: 552 QYGLVYHLSTFK 587
>dbj|BD181338.1| A stress-responsive promoter
Length = 2000
Score = 132 bits (282), Expect(4) = 8e-058
Identities = 55/80 (68%), Positives = 65/80 (81%)
Frame = +3 / +2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+I + G+W S++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GL
Sbjct: 1115 ACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 1294
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI G +KD + NKE*
Sbjct: 1295 QISRILGGQRKDRSSKNKE* 1354
Score = 103 bits (219), Expect(4) = 8e-058
Identities = 36/62 (58%), Positives = 53/62 (85%)
Frame = +3 / +3
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++ + VGRRRFS FQL+FR+IKGL+F+TF AI++ +A+P +T+ D+F+C+LAFMPTGW
Sbjct: 816 LQGLGVGRRRFSTNFQLLFRIIKGLVFLTFVAILITFLALPLITIKDLFICMLAFMPTGW 995
Query: 306 GL 311
G+
Sbjct: 996 GM 1001
Score = 85.4 bits (180), Expect(3) = 2e-030
Identities = 41/83 (49%), Positives = 44/83 (53%)
Frame = -2 / -3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IREICRPLL AWL SILVWNSDT QA+ A GVN
Sbjct: 1353 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 1174
Query: 385 XXXALIEPQSPVLWITGRIAXXI 317
L + P WI G A I
Sbjct: 1173 RASVLTDDHIPSCWIRGLHACAI 1105
Score = 68.0 bits (142), Expect(3) = 2e-030
Identities = 30/56 (53%), Positives = 35/56 (62%)
Frame = -2 / -2
Query: 307 PHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPT 140
PHPVGMKA MQ N S V+ G A ++ +A NV N RP + N SW LNL LPT
Sbjct: 997 PHPVGMKASMQMNKSLIVIRGSARKVMRIATNVRNTRPFMILNRSWKFVLNLRLPT 830
Score = 24.9 bits (48), Expect(3) = 2e-030
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 147 CPLIRSS*RAKSQKLQPMRSNKPAH 73
CP+I + K+++++ RS +P H
Sbjct: 395 CPVINNLLPLKTRRIEKERSKEPCH 321
Score = 24.9 bits (48), Expect(4) = 8e-058
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3 / +1
Query: 81 VYCFSWVVIFVILLVMK 131
VY SW VI ILL++K
Sbjct: 685 VYGASWFVILFILLIVK 735
Score = 23.1 bits (44), Expect(4) = 8e-058
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 15 RYGLVYHLNITK 50
+YGLVYHL+ K
Sbjct: 552 QYGLVYHLSTFK 587
>emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB52ZD04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1385
Score = 224 bits (484), Expect = 2e-057
Identities = 93/169 (55%), Positives = 123/169 (72%)
Frame = +3 / +3
Query: 60 KDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILI 239
++NQS+ +Y SW VI I L++K + VG++RF FQL+FR+IKG + +TF +++ +
Sbjct: 810 QENQSLWIYGASWFVILFI*LIVKVLVVGKQRFRTNFQLLFRIIKGFVSLTFLGLLITFL 989
Query: 240 AIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLF 419
A+ +T +IF+C LAFMPTGWG+ A +P+I + G W S++ LARGYEILMGLLLF
Sbjct: 990 ALRFLTPKNIFLCRLAFMPTGWGM*LIEQACKPLIQRLGFWSSVRTLARGYEILMGLLLF 1169
Query: 420 TPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
TP+A LA FVSEFQTRMLFNQAFS GLQ SRI G +KD + NKE*
Sbjct: 1170 TPVASLAWFPFVSEFQTRMLFNQAFSRGLQFSRILGGQRKDRSSKNKE* 1316
Score = 124 bits (266), Expect = 2e-027
Identities = 68/158 (43%), Positives = 79/158 (50%)
Frame = -2 / -2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IRE C PLLNAWL SILV NSDTN QAR A GVN
Sbjct: 1315 HSLFLEERSFL*PPRIRENCNPLLNAWLKSILV*NSDTNGNQARDATGVNKSKPMRIS*P 1136
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
L + Q+P I G A + P PVGMKA +Q M V A ++ NV
Sbjct: 1135 RASVLTDDQNPSR*IRGLHACSMSYIPQPVGMKASLQRKMFLGVKKRRAKKVMRSPRNVR 956
Query: 205 NIRPLINRNTSWNSALNLLLPTDTVFITSKITKITTHE 92
+ +PL+ SW LN PT F S + KIT HE
Sbjct: 955 DTKPLMILKRSWKFVLNRCFPTTRTFTIS*MNKITNHE 842
>gb|AV546514.1|AV546514 AV546514 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL15c03F 3', mRNA sequence
Length = 544
Score = 222 bits (480), Expect = 7e-057
Identities = 88/139 (63%), Positives = 112/139 (80%)
Frame = +3 / -1
Query: 150 RRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXA 329
RRFS FQL+FR+IKGL+F+TF AI++ +A+P +T+ D+F+C+LAFMPTGWG+ A
Sbjct: 544 RRFSTNFQLLFRIIKGLVFLTFVAILITFLALPLITIKDLFICMLAFMPTGWGMLLIAQA 365
Query: 330 IRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQ 509
+P+I + G+W S++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GLQ
Sbjct: 364 CKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQ 185
Query: 510 ISRIXXGHKKDXXTXNKE* 566
ISRI G +KD + NKE*
Sbjct: 184 ISRILGGQRKDRSSKNKE* 128
Score = 140 bits (301), Expect = 4e-032
Identities = 67/138 (48%), Positives = 76/138 (55%)
Frame = -2 / +3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IREICRPLL AWL SILVWNSDT QA+ A GVN
Sbjct: 129 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 308
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
L + P WI G A + PHPVGMKA MQ N S V+ G A ++ +A NV
Sbjct: 309 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQMNKSLIVIRGSARKVMRIATNVR 488
Query: 205 NIRPLINRNTSWNSALNL 152
N RP + N SW LNL
Sbjct: 489 NTRPFMILNRSWKFVLNL 542
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 132 bits (282), Expect(3) = 2e-056
Identities = 55/80 (68%), Positives = 65/80 (81%)
Frame = +3 / -2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+I + G+W S++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GL
Sbjct: 1647995 ACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 1647816
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI G +KD + NKE*
Sbjct: 1647815 QISRILGGQRKDRSSKNKE* 1647756
Score = 103 bits (219), Expect(3) = 2e-056
Identities = 36/62 (58%), Positives = 53/62 (85%)
Frame = +3 / -3
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++ + VGRRRFS FQL+FR+IKGL+F+TF AI++ +A+P +T+ D+F+C+LAFMPTGW
Sbjct: 1648294 LQGLGVGRRRFSTNFQLLFRIIKGLVFLTFVAILITFLALPLITIKDLFICMLAFMPTGW 1648115
Query: 306 GL 311
G+
Sbjct: 1648114 GM 1648109
Score = 102 bits (217), Expect(2) = 3e-040
Identities = 46/81 (56%), Positives = 53/81 (65%)
Frame = +3 / +1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A+R V G W S+K L R YE +MGL++FTPIA L+ FVSEFQTR+LFNQAFS GL
Sbjct: 1988656 ALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFNQAFSRGL 1988835
Query: 507 QISRIXXGHKKDXXTXNKE*G 569
QIS I G K K *G
Sbjct: 1988836 QISMILAGKKDKETPSTK**G 1988898
Score = 85.4 bits (180), Expect(2) = 3e-040
Identities = 28/65 (43%), Positives = 50/65 (76%)
Frame = +3 / +1
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L++ + VS+GRR+F +FQ++FR++K L+F+ F +++ +L + G+T+ D+F ILAF+P
Sbjct: 1988356 LII*QMVSMGRRKFGTDFQVMFRILKALLFLGFLSVMTVLFVVCGLTISDLFASILAFLP 1988535
Query: 297 TGWGL 311
TGW +
Sbjct: 1988536 TGWAI 1988550
Score = 85.4 bits (180), Expect(2) = 5e-030
Identities = 41/83 (49%), Positives = 44/83 (53%)
Frame = -2 / +1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IREICRPLL AWL SILVWNSDT QA+ A GVN
Sbjct: 1647757 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 1647936
Query: 385 XXXALIEPQSPVLWITGRIAXXI 317
L + P WI G A I
Sbjct: 1647937 RASVLTDDHIPSCWIRGLHACAI 1648005
Score = 68.0 bits (142), Expect(2) = 5e-030
Identities = 30/56 (53%), Positives = 35/56 (62%)
Frame = -2 / +3
Query: 307 PHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPT 140
PHPVGMKA MQ N S V+ G A ++ +A NV N RP + N SW LNL LPT
Sbjct: 1648113 PHPVGMKASMQMNKSLIVIRGSARKVMRIATNVRNTRPFMILNRSWKFVLNLRLPT 1648280
Score = 24.9 bits (48), Expect(3) = 2e-056
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3 / -1
Query: 81 VYCFSWVVIFVILLVMK 131
VY SW VI ILL++K
Sbjct: 1648425 VYGASWFVILFILLIVK 1648375
>gb|AQ959101.1|AQ959101 LEREH30TFB LERE Arabidopsis thaliana genomic clone LEREH30, DNA
sequence
Length = 711
Score = 118 bits (252), Expect(3) = 3e-056
Identities = 48/68 (70%), Positives = 58/68 (85%)
Frame = +3 / +2
Query: 108 FVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILA 287
F ++ + +TVSVGRRRFSA FQL+FRLIKGLIF+TF AI+VILI + MT+ DI VCILA
Sbjct: 218 FFVVCLSQTVSVGRRRFSASFQLMFRLIKGLIFMTFIAIIVILITLAHMTIQDIIVCILA 397
Query: 288 FMPTGWGL 311
FMPTGWG+
Sbjct: 398 FMPTGWGM 421
Score = 110 bits (234), Expect(3) = 3e-056
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +3 / +2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFS 497
A +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS
Sbjct: 536 ACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 706
Score = 76.2 bits (160), Expect(3) = 1e-025
Identities = 35/59 (59%), Positives = 41/59 (69%)
Frame = -2 / -1
Query: 307 PHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLINRNTSWNSALNLLLPTDTV 131
P PVG+KAR+ T MS VM I IT +A+NV+NI P INRN S ALNL LPT+TV
Sbjct: 417 PQPVGIKARIHTIMSCIVM*ASVINITIIAINVMNISPFINRNIS*KLALNLRLPTETV 241
Score = 55.6 bits (115), Expect(3) = 1e-025
Identities = 28/62 (45%), Positives = 31/62 (50%)
Frame = -2 / -1
Query: 502 PLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXXXXXALIEPQSPVLWITGRIAX 323
PLL A L SI VWNSDTN A+ A GVN L +PQ+P L TG A
Sbjct: 711 PLLKA*LKSIRVWNSDTNGNHAKNATGVNSNSPITISYPRARVLTDPQNPAL*TTGLHAC 532
Query: 322 XI 317
I
Sbjct: 531 AI 526
Score = 31.3 bits (62), Expect(3) = 3e-056
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3 / +2
Query: 72 SVLVYCFSWVVIFVILLVMK 131
S VY SW+VIF+IL VMK
Sbjct: 95 STQVYGVSWLVIFLILFVMK 154
Score = 24.9 bits (48), Expect(3) = 1e-025
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 130 FITSKITKITTHEKQ*T 80
FIT+ I KIT+H+ *T
Sbjct: 153 FITNNIKKITSHDTP*T 103
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 132 bits (282), Expect(2) = 2e-054
Identities = 55/80 (68%), Positives = 65/80 (81%)
Frame = +3 / -1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+I + G+W S++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GL
Sbjct: 1648118 ACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 1647939
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI G +KD + NKE*
Sbjct: 1647938 QISRILGGQRKDRSSKNKE* 1647879
Score = 103 bits (219), Expect(2) = 2e-054
Identities = 36/62 (58%), Positives = 53/62 (85%)
Frame = +3 / -2
Query: 126 MKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGW 305
++ + VGRRRFS FQL+FR+IKGL+F+TF AI++ +A+P +T+ D+F+C+LAFMPTGW
Sbjct: 1648417 LQGLGVGRRRFSTNFQLLFRIIKGLVFLTFVAILITFLALPLITIKDLFICMLAFMPTGW 1648238
Query: 306 GL 311
G+
Sbjct: 1648237 GM 1648232
>ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTHASE-LIKE 7);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT1G06490 (ATGSL07) mRNA, complete cds
Length = 5802
Score = 204 bits (439), Expect(2) = 2e-053
Identities = 81/169 (47%), Positives = 114/169 (67%)
Frame = +3 / +1
Query: 54 ITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVI 233
I + + + LVY SW ++ +LLV+K VS+GRR+F +FQ++FR++K L+F+ F +++ +
Sbjct: 5293 IARRHTTFLVYGLSWAILLSVLLVLKMVSMGRRKFGTDFQVMFRILKALLFLGFLSVMTV 5472
Query: 234 LIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLL 413
L + G+T+ D+F ILAF+PTGW + A+R V G W S+K L R YE +MGL+
Sbjct: 5473 LFVVCGLTISDLFASILAFLPTGWAILLIGQALRSVFKGLGFWDSVKELGRAYEYIMGLV 5652
Query: 414 LFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNK 560
+FTPIA L+ FVSEFQTR+LFNQAFS GLQIS I G K K
Sbjct: 5653 IFTPIAVLSWFPFVSEFQTRLLFNQAFSRGLQISMILAGKKDKETPSTK 5799
Score = 28.1 bits (55), Expect(2) = 2e-053
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITKKIT 59
+YG+VYHLNI ++ T
Sbjct: 5266 QYGIVYHLNIARRHT 5310
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete
sequence
Length = 104009
Score = 202 bits (436), Expect(2) = 1e-052
Identities = 84/156 (53%), Positives = 112/156 (71%)
Frame = +3 / +2
Query: 72 SVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPG 251
S++VY SW+VI +++V+K VS+GR++FSA+FQL+FRL+K +FI IV +L
Sbjct: 13883 SIIVYGLSWLVIVAVMIVLKIVSMGRKKFSADFQLMFRLLKLFLFIGSVVIVGMLFHFLK 14062
Query: 252 MTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 431
+TV DI +LAF+PTGW L RP++ G+WGS+KALARGYE +MG+++F P+
Sbjct: 14063 LTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVT 14242
Query: 432 FLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKK 539
LA FVSEFQTR+LFNQAFS GLQI RI G KK
Sbjct: 14243 VLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKK 14350
Score = 26.7 bits (52), Expect(2) = 1e-052
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3 / +2
Query: 15 RYGLVYHLNITKKITKDNQSVLV 83
+YG+VY LN+TK+ Q ++
Sbjct: 13823 QYGIVYQLNLTKESRMGKQHSII 13891
>gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F5 map PR1, complete
sequence
Length = 102585
Score = 202 bits (436), Expect(2) = 1e-052
Identities = 84/156 (53%), Positives = 112/156 (71%)
Frame = +3 / +1
Query: 72 SVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPG 251
S++VY SW+VI +++V+K VS+GR++FSA+FQL+FRL+K +FI IV +L
Sbjct: 96085 SIIVYGLSWLVIVAVMIVLKIVSMGRKKFSADFQLMFRLLKLFLFIGSVVIVGMLFHFLK 96264
Query: 252 MTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 431
+TV DI +LAF+PTGW L RP++ G+WGS+KALARGYE +MG+++F P+
Sbjct: 96265 LTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVT 96444
Query: 432 FLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKK 539
LA FVSEFQTR+LFNQAFS GLQI RI G KK
Sbjct: 96445 VLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKK 96552
Score = 26.7 bits (52), Expect(2) = 1e-052
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITKKITKDNQSVLV 83
+YG+VY LN+TK+ Q ++
Sbjct: 96025 QYGIVYQLNLTKESRMGKQHSII 96093
>gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, complete cds
Length = 5950
Score = 202 bits (436), Expect(2) = 1e-052
Identities = 84/156 (53%), Positives = 112/156 (71%)
Frame = +3 / +1
Query: 72 SVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPG 251
S++VY SW+VI +++V+K VS+GR++FSA+FQL+FRL+K +FI IV +L
Sbjct: 5449 SIIVYGLSWLVIVAVMIVLKIVSMGRKKFSADFQLMFRLLKLFLFIGSVVIVGMLFHFLK 5628
Query: 252 MTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 431
+TV DI +LAF+PTGW L RP++ G+WGS+KALARGYE +MG+++F P+
Sbjct: 5629 LTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVT 5808
Query: 432 FLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKK 539
LA FVSEFQTR+LFNQAFS GLQI RI G KK
Sbjct: 5809 VLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKK 5916
Score = 26.7 bits (52), Expect(2) = 1e-052
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITKKITKDNQSVLV 83
+YG+VY LN+TK+ Q ++
Sbjct: 5389 QYGIVYQLNLTKESRMGKQHSII 5457
>tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase (LAP1) mRNA, complete cds
Length = 5772
Score = 202 bits (436), Expect(2) = 1e-052
Identities = 84/156 (53%), Positives = 112/156 (71%)
Frame = +3 / +1
Query: 72 SVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPG 251
S++VY SW+VI +++V+K VS+GR++FSA+FQL+FRL+K +FI IV +L
Sbjct: 5296 SIIVYGLSWLVIVAVMIVLKIVSMGRKKFSADFQLMFRLLKLFLFIGSVVIVGMLFHFLK 5475
Query: 252 MTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 431
+TV DI +LAF+PTGW L RP++ G+WGS+KALARGYE +MG+++F P+
Sbjct: 5476 LTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVT 5655
Query: 432 FLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKK 539
LA FVSEFQTR+LFNQAFS GLQI RI G KK
Sbjct: 5656 VLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKK 5763
Score = 26.7 bits (52), Expect(2) = 1e-052
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITKKITKDNQSVLV 83
+YG+VY LN+TK+ Q ++
Sbjct: 5236 QYGIVYQLNLTKESRMGKQHSII 5304
>ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synthase AT2G13680 mRNA,
complete cds
Length = 5772
Score = 202 bits (436), Expect(2) = 1e-052
Identities = 84/156 (53%), Positives = 112/156 (71%)
Frame = +3 / +1
Query: 72 SVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPG 251
S++VY SW+VI +++V+K VS+GR++FSA+FQL+FRL+K +FI IV +L
Sbjct: 5296 SIIVYGLSWLVIVAVMIVLKIVSMGRKKFSADFQLMFRLLKLFLFIGSVVIVGMLFHFLK 5475
Query: 252 MTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 431
+TV DI +LAF+PTGW L RP++ G+WGS+KALARGYE +MG+++F P+
Sbjct: 5476 LTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVT 5655
Query: 432 FLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKK 539
LA FVSEFQTR+LFNQAFS GLQI RI G KK
Sbjct: 5656 VLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKK 5763
Score = 26.7 bits (52), Expect(2) = 1e-052
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITKKITKDNQSVLV 83
+YG+VY LN+TK+ Q ++
Sbjct: 5236 QYGIVYQLNLTKESRMGKQHSII 5304
>gb|AI996136.1|AI996136 701550178 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701550178, mRNA sequence
Length = 626
Score = 207 bits (446), Expect = 4e-052
Identities = 83/142 (58%), Positives = 110/142 (77%)
Frame = +3 / -3
Query: 141 VGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXX 320
VG+ + EFQL+FR+IKGL+ +TF AI++ +A+P +T+ D+F+C++AFMPTG +
Sbjct: 600 VGKAKIQNEFQLLFRIIKGLVXLTFVAILITFLALPLITIKDLFICMVAFMPTGXXMLLI 421
Query: 321 XXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSX 500
A +P+I + G+W S++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS
Sbjct: 420 AQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSR 241
Query: 501 GLQISRIXXGHKKDXXTXNKE* 566
GLQISRI G +KD + NKE*
Sbjct: 240 GLQISRILGGQRKDRSSKNKE* 175
Score = 134 bits (287), Expect = 3e-030
Identities = 66/142 (46%), Positives = 75/142 (52%)
Frame = -2 / +2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IREICRPLL AWL SILVWNSDT QA+ A GVN
Sbjct: 176 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 355
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
L + P WI G A + HPVGMKA MQ N S V+ G A ++ +A NV
Sbjct: 356 RASVLTDDHIPSCWIRGLHACAMRSXXHPVGMKATMQMNKSLIVIRGSARKVMRIATNVR 535
Query: 205 NIRPLINRNTSWNSALNLLLPT 140
RP + N SWNS PT
Sbjct: 536 XTRPFMILNRSWNSF*IFAFPT 601
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 202 bits (436), Expect = 9e-051
Identities = 84/156 (53%), Positives = 112/156 (71%)
Frame = +3 / +2
Query: 72 SVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPG 251
S++VY SW+VI +++V+K VS+GR++FSA+FQL+FRL+K +FI IV +L
Sbjct: 5712740 SIIVYGLSWLVIVAVMIVLKIVSMGRKKFSADFQLMFRLLKLFLFIGSVVIVGMLFHFLK 5712919
Query: 252 MTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 431
+TV DI +LAF+PTGW L RP++ G+WGS+KALARGYE +MG+++F P+
Sbjct: 5712920 LTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVT 5713099
Query: 432 FLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKK 539
LA FVSEFQTR+LFNQAFS GLQI RI G KK
Sbjct: 5713100 VLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKK 5713207
Score = 138 bits (297), Expect = 1e-031
Identities = 55/133 (41%), Positives = 86/133 (64%)
Frame = +3 / -3
Query: 153 RFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAI 332
R S+ L R ++G+ ITF A++V+ IA+ +++ D+F C+L F+PTGW L
Sbjct: 15462415 RKSSNILLALRFLQGVASITFIALIVVAIAMTDLSIPDMFACVLGFIPTGWALLSLAITW 15462236
Query: 333 RPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQI 512
+ V+ GLW +++ R Y+ MG+L+F+PIA L+ F+S FQ+R+LFNQAFS GL+I
Sbjct: 15462235 KQVLRVLGLWETVREFGRIYDAAMGMLIFSPIALLSWFPFISTFQSRLLFNQAFSRGLEI 15462056
Query: 513 SRIXXGHKKDXXT 551
S I G++ + T
Sbjct: 15462055 SIILAGNRANVET 15462017
Score = 133 bits (284), Expect = 8e-030
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = +3 / +2
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+I + G W S++ LARGYEILMGLLLFTP+AFLA FVSEFQTRMLFNQAFS GL
Sbjct: 13606904 ACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 13607083
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI G +KD + NKE*
Sbjct: 13607084 QISRILGGQRKDRSSKNKE* 13607143
>ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTHASE-LIKE 11);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G59100 (ATGSL11) mRNA, complete cds
Length = 5805
Score = 193 bits (417), Expect(2) = 4e-049
Identities = 80/169 (47%), Positives = 113/169 (66%)
Frame = +3 / +1
Query: 54 ITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVI 233
I++ ++S LVY SWVV+ LLV+K VS+GRRRF +FQL+FR++K L+F+ F +++ I
Sbjct: 5296 ISQRSKSFLVYGLSWVVLLTSLLVLKMVSMGRRRFGTDFQLMFRILKALLFLGFLSVMTI 5475
Query: 234 LIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLL 413
L + +T+ D+ +LAF+PTGW + +R I G+W S+K L R YE +MGL+
Sbjct: 5476 LFVVFKLTLTDLSASVLAFLPTGWAILLIGQVLRSPIKALGVWDSVKELGRAYENIMGLV 5655
Query: 414 LFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNK 560
+F PIA L+ VSEFQ R+LFNQAFS GLQIS I G K + +K
Sbjct: 5656 IFAPIAVLSWFPIVSEFQARLLFNQAFSRGLQISMILAGRKDKATSSHK 5802
Score = 23.5 bits (45), Expect(2) = 4e-049
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITKK 53
+YG+VY LNI+++
Sbjct: 5269 QYGIVYQLNISQR 5307
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete
sequence
Length = 103194
Score = 133 bits (284), Expect(2) = 4e-048
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = +3 / -1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P+I + G W S++ LARGYEILMGLLLFTP+AFLA FVSEFQTRMLFNQAFS GL
Sbjct: 89583 ACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGL 89404
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI G +KD + NKE*
Sbjct: 89403 QISRILGGQRKDRSSKNKE* 89344
Score = 90.4 bits (191), Expect(2) = 4e-048
Identities = 32/59 (54%), Positives = 47/59 (79%)
Frame = +3 / -2
Query: 135 VSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGL 311
+ VGR+RFS FQL+FR+IKG +F+TF +++ +A+ +T DIF+C+LAFMPTGWG+
Sbjct: 89894 LGVGRQRFSTNFQLLFRIIKGFVFLTFLGLLITFLALRFLTPKDIFLCMLAFMPTGWGM 89718
>gb|AV535768.1|AV535768 AV535768 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB101h07F 3', mRNA sequence
Length = 533
Score = 170 bits (366), Expect(2) = 5e-048
Identities = 70/105 (66%), Positives = 82/105 (78%)
Frame = +3 / -3
Query: 252 MTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 431
+T DIF+C+LAFMPTGWG+ A +P+I + G W S++ LARGYEILMGLLLFTP+A
Sbjct: 435 LTPKDIFLCMLAFMPTGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVA 256
Query: 432 FLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
FLA FVSEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 255 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 121
Score = 99.1 bits (210), Expect(2) = 3e-023
Identities = 51/101 (50%), Positives = 56/101 (55%)
Frame = -2 / +2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+SLF SFL P IREIC PLLNAWL SILV NSDTN QAR A GVN
Sbjct: 122 HSLFLEERSFL*PPRIREICNPLLNAWLKSILV*NSDTNGNQARNATGVNKSKPMRIS*P 301
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMS 263
L + Q+P I G A + P PVGMKA +Q MS
Sbjct: 302 RASVLTDDQNPSR*IRGLHACAMSNIPQPVGMKASIQRKMS 424
Score = 43.2 bits (88), Expect(2) = 5e-048
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +3 / -2
Query: 156 FSAEFQLVFRLIKGLIFITFTAIVVILIAI 245
FS FQL+FR+IKG +F+TF +++ +A+
Sbjct: 532 FSTNFQLLFRIIKGFVFLTFLGLLITFLAL 443
Score = 31.8 bits (63), Expect(2) = 3e-023
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1 / +2
Query: 215 KCYKYQTLDQPEH*LELCTE 156
KC +++TLD PE LE+C E
Sbjct: 473 KCEEHKTLDDPEEKLEVCAE 532
>ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTHASE-LIKE 9);
1,3-beta-glucan synthase AT5G36870 (ATGSL09) mRNA,
complete cds
Length = 5589
Score = 185 bits (399), Expect = 1e-045
Identities = 77/165 (46%), Positives = 110/165 (66%)
Frame = +3 / +1
Query: 72 SVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPG 251
S+ V+ SW++I ++LL + + RRR EFQL+FR+IK +F+ F AI + L+
Sbjct: 5095 SLWVFGASWLLILILLLTVTVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRL 5274
Query: 252 MTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 431
+ D+F+C+LA +PTGWGL + +P+I + G+W + LA Y+++MG LLF PIA
Sbjct: 5275 ILPQDVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIA 5454
Query: 432 FLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
F+A F+SEFQTRMLFNQAFS GL ISRI G +K + NK+*
Sbjct: 5455 FMAWFPFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD* 5589
Score = 117 bits (251), Expect = 3e-025
Identities = 64/164 (39%), Positives = 77/164 (46%)
Frame = -2 / -2
Query: 562 SLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXXX 383
SLF FL P IREICRPLL AWL SILVWNSD N QA A+G+N
Sbjct: 5585 SLFLEERCFL*PLRIREICRPLLKAWLKSILVWNSDMNGNQAINAIGINKREPITRS*TQ 5406
Query: 382 XXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVIN 203
+ + P I G I PHPVG+ A MQ S + +R+ +A+N N
Sbjct: 5405 ANVITQDHIPGC*IRGLQDCAISSNPHPVGINASMQRKTSWGSIRRQVMRVMNIAINARN 5226
Query: 202 IRPLINRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTL 71
L+ N SWNS + L SK KI+ HE T L
Sbjct: 5225 KETLMILNKSWNSVPSRRLA*SKTVTVSKRIKISNHEAPKTHKL 5094
>gb|AV534683.1|AV534683 AV534683 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB084c02F 3', mRNA sequence
Length = 455
Score = 179 bits (385), Expect = 9e-044
Identities = 72/101 (71%), Positives = 82/101 (81%)
Frame = +3 / -3
Query: 264 DIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAX 443
DI VCILAFMPTGWG+ A +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLA
Sbjct: 453 DIIVCILAFMPTGWGMLLIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAW 274
Query: 444 XXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
FVSEFQTRMLFNQAFS GLQISRI GH+KD + NKE*
Sbjct: 273 FPFVSEFQTRMLFNQAFSRGLQISRILGGHRKDRSSRNKE* 151
>ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTHASE-LIKE 4);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G14570 (ATGSL04) mRNA, complete cds
Length = 5922
Score = 171 bits (367), Expect(2) = 2e-043
Identities = 73/163 (44%), Positives = 99/163 (60%)
Frame = +3 / +1
Query: 54 ITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVI 233
IT+ N +++VY SWVVI +K V +GR+ FS LVFR K +F++ I++
Sbjct: 5428 ITQSNTNIIVYALSWVVILATFFTVKAVDLGRQLFSTRKHLVFRFFKVFVFVSILTIIIT 5607
Query: 234 LIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLL 413
L I ++V D+ V LAF+PTGWGL A+RP I T LW + LAR Y+ MG++
Sbjct: 5608 LANICHLSVKDLLVSCLAFLPTGWGLILIAQAVRPKIEGTSLWEFTQVLARAYDYGMGVV 5787
Query: 414 LFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKD 542
LF P+A LA +S FQTR LFN+AF+ LQI I G KK+
Sbjct: 5788 LFAPMAILAWLPIISAFQTRFLFNEAFNRRLQIQPILAGKKKN 5916
Score = 27.6 bits (54), Expect(2) = 2e-043
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITKKIT 59
+YGLVYHL+IT+ T
Sbjct: 5401 QYGLVYHLDITQSNT 5445
>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I,
complete sequence
Length = 93724
Score = 102 bits (217), Expect(2) = 3e-040
Identities = 46/81 (56%), Positives = 53/81 (65%)
Frame = +3 / -1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A+R V G W S+K L R YE +MGL++FTPIA L+ FVSEFQTR+LFNQAFS GL
Sbjct: 65200 ALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFNQAFSRGL 65021
Query: 507 QISRIXXGHKKDXXTXNKE*G 569
QIS I G K K *G
Sbjct: 65020 QISMILAGKKDKETPSTK**G 64958
Score = 85.4 bits (180), Expect(2) = 3e-040
Identities = 28/65 (43%), Positives = 50/65 (76%)
Frame = +3 / -1
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L++ + VS+GRR+F +FQ++FR++K L+F+ F +++ +L + G+T+ D+F ILAF+P
Sbjct: 65500 LII*QMVSMGRRKFGTDFQVMFRILKALLFLGFLSVMTVLFVVCGLTISDLFASILAFLP 65321
Query: 297 TGWGL 311
TGW +
Sbjct: 65320 TGWAI 65306
>gb|AV523506.1|AV523506 AV523506 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL30a04F 3', mRNA
sequence
Length = 626
Score = 159 bits (341), Expect = 1e-037
Identities = 64/143 (44%), Positives = 96/143 (67%)
Frame = +3 / -3
Query: 102 VIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCI 281
V F +++V+ V ++ S FQL+ R I+GL + A +++ + + ++V DIF C+
Sbjct: 621 VAFAMIIVLFKVFTFSQKISVNFQLLLRFIQGLSLLMALAGIIVAVVLTPLSVTDIFACV 442
Query: 282 LAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSE 461
LAF+PTGWG+ A +PV+ + G+W SI++LAR Y+ LMG+L+F P+A + FVS
Sbjct: 441 LAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVST 262
Query: 462 FQTRMLFNQAFSXGLQISRIXXG 530
FQTRM+FNQAFS GL+IS I G
Sbjct: 261 FQTRMMFNQAFSRGLEISLILAG 193
>gb|AY099734.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1780
Score = 159 bits (341), Expect = 1e-037
Identities = 64/143 (44%), Positives = 96/143 (67%)
Frame = +3 / +2
Query: 102 VIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCI 281
V F +++V+ V ++ S FQL+ R I+GL + A +++ + + ++V DIF C+
Sbjct: 1130 VAFAMIIVLFKVFTFSQKISVNFQLLLRFIQGLSLLMALAGIIVAVVLTPLSVTDIFACV 1309
Query: 282 LAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSE 461
LAF+PTGWG+ A +PV+ + G+W SI++LAR Y+ LMG+L+F P+A + FVS
Sbjct: 1310 LAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVST 1489
Query: 462 FQTRMLFNQAFSXGLQISRIXXG 530
FQTRM+FNQAFS GL+IS I G
Sbjct: 1490 FQTRMMFNQAFSRGLEISLILAG 1558
>gb|BT000346.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1404
Score = 159 bits (341), Expect = 1e-037
Identities = 64/143 (44%), Positives = 96/143 (67%)
Frame = +3 / +1
Query: 102 VIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCI 281
V F +++V+ V ++ S FQL+ R I+GL + A +++ + + ++V DIF C+
Sbjct: 859 VAFAMIIVLFKVFTFSQKISVNFQLLLRFIQGLSLLMALAGIIVAVVLTPLSVTDIFACV 1038
Query: 282 LAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSE 461
LAF+PTGWG+ A +PV+ + G+W SI++LAR Y+ LMG+L+F P+A + FVS
Sbjct: 1039 LAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVST 1218
Query: 462 FQTRMLFNQAFSXGLQISRIXXG 530
FQTRM+FNQAFS GL+IS I G
Sbjct: 1219 FQTRMMFNQAFSRGLEISLILAG 1287
>dbj|AK221151.1| Arabidopsis thaliana mRNA for putative glucan synthase, complete
cds, clone: RAFL22-94-A16
Length = 1088
Score = 159 bits (341), Expect = 1e-037
Identities = 64/143 (44%), Positives = 96/143 (67%)
Frame = +3 / +3
Query: 102 VIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCI 281
V F +++V+ V ++ S FQL+ R I+GL + A +++ + + ++V DIF C+
Sbjct: 474 VAFAMIIVLFKVFTFSQKISVNFQLLLRFIQGLSLLMALAGIIVAVVLTPLSVTDIFACV 653
Query: 282 LAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSE 461
LAF+PTGWG+ A +PV+ + G+W SI++LAR Y+ LMG+L+F P+A + FVS
Sbjct: 654 LAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVST 833
Query: 462 FQTRMLFNQAFSXGLQISRIXXG 530
FQTRM+FNQAFS GL+IS I G
Sbjct: 834 FQTRMMFNQAFSRGLEISLILAG 902
>ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTHASE-LIKE 10);
1,3-beta-glucan synthase AT3G07160 (ATGSL10) mRNA,
complete cds
Length = 5981
Score = 159 bits (341), Expect = 1e-037
Identities = 64/143 (44%), Positives = 96/143 (67%)
Frame = +3 / +1
Query: 102 VIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCI 281
V F +++V+ V ++ S FQL+ R I+GL + A +++ + + ++V DIF C+
Sbjct: 5344 VAFAMIIVLFKVFTFSQKISVNFQLLLRFIQGLSLLMALAGIIVAVVLTPLSVTDIFACV 5523
Query: 282 LAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSE 461
LAF+PTGWG+ A +PV+ + G+W SI++LAR Y+ LMG+L+F P+A + FVS
Sbjct: 5524 LAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVST 5703
Query: 462 FQTRMLFNQAFSXGLQISRIXXG 530
FQTRM+FNQAFS GL+IS I G
Sbjct: 5704 FQTRMMFNQAFSRGLEISLILAG 5772
>emb|BX825904.1|CNS0A6G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL71ZB05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1053
Score = 158 bits (340), Expect = 2e-037
Identities = 64/143 (44%), Positives = 95/143 (66%)
Frame = +3 / +3
Query: 102 VIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCI 281
V F +++V+ V ++ S FQL+ R I+GL + A +++ + + ++V DIF C+
Sbjct: 432 VAFAMIIVLFKVFTFSQKISVNFQLLLRFIQGLSLLMALAGIIVAVVLTPLSVTDIFACV 611
Query: 282 LAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSE 461
LAF+PTGWG+ A +PV+ + G+W SI+ LAR Y+ LMG+L+F P+A + FVS
Sbjct: 612 LAFIPTGWGILSIACAWKPVLKRMGMWKSIRCLARLYDALMGMLIFLPVALCSWFPFVST 791
Query: 462 FQTRMLFNQAFSXGLQISRIXXG 530
FQTRM+FNQAFS GL+IS I G
Sbjct: 792 FQTRMMFNQAFSRGLEISLILAG 860
>gb|AY085106.1| Arabidopsis thaliana clone 12977 mRNA, complete sequence
Length = 1267
Score = 155 bits (334), Expect = 1e-036
Identities = 63/143 (44%), Positives = 95/143 (66%)
Frame = +3 / +3
Query: 102 VIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCI 281
V F +++V+ V ++ S FQL+ R I+GL + A +++ + + ++V DIF C+
Sbjct: 630 VAFAMIIVLFKVFTFSQKISVNFQLLLRFIQGLSLLMALAGIIVAVVLTPLSVTDIFACV 809
Query: 282 LAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSE 461
LAF+PTGWG+ A +PV+ + G+W SI++LAR Y+ LMG+L+F P+A + FVS
Sbjct: 810 LAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVST 989
Query: 462 FQTRMLFNQAFSXGLQISRIXXG 530
FQTRM+ NQAFS GL+IS I G
Sbjct: 990 FQTRMMXNQAFSRGLEISLILAG 1058
>gb|AI995793.1|AI995793 701548593 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701548593, mRNA sequence
Length = 618
Score = 148 bits (318), Expect = 2e-034
Identities = 59/127 (46%), Positives = 87/127 (68%)
Frame = +3 / -3
Query: 150 RRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXA 329
++ S QL+ R I+GL + A +++ + + ++V DIF C+LAF+PTGWG+ A
Sbjct: 577 QKISVNSQLLLRFIQGLSLLMALAGIIVAVVLXPLSVTDIFACVLAFIPTGWGILSIACA 398
Query: 330 IRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQ 509
+PV+ + G+W SI++LAR Y+ LMG+L+F P+A + FVS FQTRM+FNQAFS GL+
Sbjct: 397 WKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVSTFQTRMMFNQAFSRGLE 218
Query: 510 ISRIXXG 530
IS I G
Sbjct: 217 ISLILAG 197
>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8
Length = 70098
Score = 103 bits (219), Expect(2) = 2e-033
Identities = 43/78 (55%), Positives = 56/78 (71%)
Frame = +3 / +3
Query: 333 RPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQI 512
+P+I + G+W + LA Y+++MG LLF PIAF+A F+SEFQTRMLFNQAFS GL I
Sbjct: 63513 KPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHI 63692
Query: 513 SRIXXGHKKDXXTXNKE* 566
SRI G +K + NK+*
Sbjct: 63693 SRILSGQRKHRSSKNKD* 63746
Score = 70.3 bits (147), Expect(2) = 2e-033
Identities = 28/69 (40%), Positives = 43/69 (62%)
Frame = +3 / +2
Query: 105 IFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCIL 284
I + + + + RRR EFQL+FR+IK +F+ F AI + L+ + D+F+C+L
Sbjct: 63125 ILFSMQLSQVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRLILPQDVFLCML 63304
Query: 285 AFMPTGWGL 311
A +PTGWGL
Sbjct: 63305 ALIPTGWGL 63331
>gb|B27162.1|B27162 T2A17TR TAMU Arabidopsis thaliana genomic clone T2A17, DNA sequence
Length = 573
Score = 85.4 bits (180), Expect(2) = 2e-032
Identities = 28/65 (43%), Positives = 50/65 (76%)
Frame = +3 / +1
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L++ + VS+GRR+F +FQ++FR++K L+F+ F +++ +L + G+T+ D+F ILAF+P
Sbjct: 115 LII*QMVSMGRRKFGTDFQVMFRILKALLFLGFLSVMTVLFVVCGLTISDLFASILAFLP 294
Query: 297 TGWGL 311
TGW +
Sbjct: 295 TGWAI 309
Score = 76.2 bits (160), Expect(2) = 2e-032
Identities = 31/53 (58%), Positives = 38/53 (71%)
Frame = +3 / +1
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFN 485
A+R V G W S+K L R YE +MGL++FTPIA L+ FVSEFQTR+LFN
Sbjct: 415 ALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFN 573
>ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTHASE-LIKE 8);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G36850 (ATGSL08) mRNA, complete cds
Length = 5281
Score = 135 bits (289), Expect(2) = 6e-032
Identities = 53/122 (43%), Positives = 81/122 (66%)
Frame = +3 / +1
Query: 186 LIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWG 365
L KG+ ITF A++V+ IA+ +++ D+F C+L F+PTGW L + V+ GLW
Sbjct: 4675 LFKGVASITFIALIVVAIAMTDLSIPDMFACVLGFIPTGWALLSLAITWKQVLRVLGLWE 4854
Query: 366 SIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDX 545
+++ R Y+ MG+L+F+PIA L+ F+S FQ+R+LFNQAFS GL+IS I G++ +
Sbjct: 4855 TVREFGRIYDAAMGMLIFSPIALLSWFPFISTFQSRLLFNQAFSRGLEISIILAGNRANV 5034
Query: 546 XT 551
T
Sbjct: 5035 ET 5040
Score = 24.4 bits (47), Expect(2) = 6e-032
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITKKIT 59
+YG+VY L++T+K T
Sbjct: 4579 QYGIVYKLDLTRKNT 4623
>gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4
Length = 80196
Score = 138 bits (297), Expect = 1e-031
Identities = 56/162 (34%), Positives = 97/162 (59%)
Frame = +3 / +1
Query: 51 KITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVV 230
+I ++ S+ VY SW I I+ + T ++R+S + + +R I+ L+ + +VV
Sbjct: 12430 RIAENRTSIGVYLISWGCIIGIVAIYITTIYAQKRYSVKEHIKYRFIQFLVILLTVLVVV 12609
Query: 231 ILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGL 410
+++ +TV+D+ + +LAF+PTGWGL ++P + T +W ++ ++AR Y++ GL
Sbjct: 12610 MMLQFTKLTVVDLLISLLAFVPTGWGLISIAQVLKPFLLSTVVWDTVISVARFYDLFFGL 12789
Query: 411 LLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
++ P+A L+ QTR+LFN+AFS GLQIS I G K
Sbjct: 12790 IVMAPVALLSWLPGFQNMQTRILFNEAFSRGLQISIILAGKK 12915
>emb|AX059538.1| Sequence 271 from Patent WO0055325
Length = 47489
Score = 138 bits (297), Expect = 1e-031
Identities = 56/162 (34%), Positives = 97/162 (59%)
Frame = +3 / +2
Query: 51 KITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVV 230
+I ++ S+ VY SW I I+ + T ++R+S + + +R I+ L+ + +VV
Sbjct: 2933 RIAENRTSIGVYLISWGCIIGIVAIYITTIYAQKRYSVKEHIKYRFIQFLVILLTVLVVV 3112
Query: 231 ILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGL 410
+++ +TV+D+ + +LAF+PTGWGL ++P + T +W ++ ++AR Y++ GL
Sbjct: 3113 MMLQFTKLTVVDLLISLLAFVPTGWGLISIAQVLKPFLLSTVVWDTVISVARFYDLFFGL 3292
Query: 411 LLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
++ P+A L+ QTR+LFN+AFS GLQIS I G K
Sbjct: 3293 IVMAPVALLSWLPGFQNMQTRILFNEAFSRGLQISIILAGKK 3418
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,045,121,979
Number of Sequences: 1013581
Number of extensions: 12451690
Number of successful extensions: 88882
Number of sequences better than 1.0e-020: 84
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 44319555720
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)