TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2418946.2.1
(690 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTH... 222 7e-057
gb|AV534683.1|AV534683 AV534683 Arabidopsis thaliana flower... 217 2e-055
gb|AV546514.1|AV546514 AV546514 Arabidopsis thaliana roots ... 210 5e-053
gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthas... 210 5e-053
emb|AX412747.1| Sequence 511 from Patent WO0222675 210 5e-053
emb|AX508002.1| Sequence 2697 from Patent WO0216655 210 5e-053
ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHA... 210 5e-053
emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome... 177 1e-052
gb|AV535768.1|AV535768 AV535768 Arabidopsis thaliana flower... 207 3e-052
dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for put... 207 3e-052
ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTH... 207 3e-052
emb|AX651854.1| Sequence 720 from Patent WO03000898 171 4e-050
gb|AI996136.1|AI996136 701550178 A. thaliana, Columbia Col-... 199 8e-050
gb|CW796846.1|CW796846 WiscDsLox468C6 Arabidopsis thaliana ... 177 1e-049
gb|AQ959103.1|AQ959103 LEREH30TRB LERE Arabidopsis thaliana... 166 1e-049
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 163 2e-048
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 163 2e-048
gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis tha... 163 2e-048
emb|AX441264.1| Sequence 18 from Patent EP1209228 163 3e-048
dbj|BD181338.1| A stress-responsive promoter 163 3e-048
gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D... 165 6e-048
emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cD... 192 1e-047
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 177 4e-043
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 177 4e-043
ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTH... 169 1e-040
gb|AQ959102.1|AQ959102 LEREH30TR LERE Arabidopsis thaliana ... 166 5e-040
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 165 1e-039
gb|AU228526.1|AU228526 AU228526 RAFL16 Arabidopsis thaliana... 135 1e-039
gb|AQ959101.1|AQ959101 LEREH30TFB LERE Arabidopsis thaliana... 132 3e-039
gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J... 164 3e-039
gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F... 164 3e-039
tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase ... 164 3e-039
gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, ... 164 3e-039
ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synth... 164 3e-039
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 163 4e-039
ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTH... 162 1e-038
gb|AQ957761.1|AQ957761 LERAR55TF LERA Arabidopsis thaliana ... 157 3e-037
gb|AI995793.1|AI995793 701548593 A. thaliana, Columbia Col-... 155 1e-036
gb|AV523506.1|AV523506 AV523506 Arabidopsis thaliana aboveg... 155 1e-036
gb|AY099734.1| Arabidopsis thaliana putative glucan synthas... 155 1e-036
gb|BT000346.1| Arabidopsis thaliana putative glucan synthas... 155 1e-036
dbj|AK221151.1| Arabidopsis thaliana mRNA for putative gluc... 155 1e-036
ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTH... 155 1e-036
emb|BX825904.1|CNS0A6G3 Arabidopsis thaliana Full-length cD... 153 7e-036
gb|AY085106.1| Arabidopsis thaliana clone 12977 mRNA, compl... 152 1e-035
gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis tha... 125 8e-035
ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTH... 145 1e-033
dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosom... 131 1e-033
ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTH... 140 3e-032
gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome II... 115 4e-032
gb|CL499023.1|CL499023 SAIL_662_E12.v2 SAIL Collection Arab... 137 3e-031
gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8... 133 6e-030
ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTH... 133 6e-030
emb|AL759226.1| Arabidopsis thaliana T-DNA flanking sequenc... 131 2e-029
gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 126 7e-028
emb|AX059538.1| Sequence 271 from Patent WO0055325 126 7e-028
gb|AY050990.1| Arabidopsis thaliana putative glucan synthas... 126 7e-028
gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis tha... 126 7e-028
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 126 7e-028
emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosom... 126 7e-028
ref|NM_116736.1| Arabidopsis thaliana ATGSL1 (GLUCAN SYNTHA... 126 7e-028
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 126 7e-028
gb|AV522143.1|AV522143 AV522143 Arabidopsis thaliana aboveg... 124 2e-027
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 119 8e-026
emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome... 119 8e-026
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 119 8e-026
gb|B27162.1|B27162 T2A17TR TAMU Arabidopsis thaliana genomi... 95 9e-026
gb|BH753021.1|BH753021 SALK_019658.55.75.x Arabidopsis thal... 115 2e-024
gb|AV548414.1|AV548414 AV548414 Arabidopsis thaliana roots ... 115 2e-024
gb|AV546456.1|AV546456 AV546456 Arabidopsis thaliana roots ... 110 6e-023
dbj|AB023038.1| Arabidopsis thaliana genomic DNA, chromosom... 109 1e-022
emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome... 82 1e-022
gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromoso... 82 1e-022
gb|AF071527.1| Arabidopsis thaliana BAC F9H3, from chromoso... 82 1e-022
ref|NM_116593.3| Arabidopsis thaliana ATGSL05 (GLUCAN SYNTH... 82 2e-022
emb|AX506240.1| Sequence 935 from Patent WO0216655 82 2e-022
gb|BX836766.1|BX836766 BX836766 Arabidopsis thaliana Flower... 67 2e-022
gb|AV543953.1|AV543953 AV543953 Arabidopsis thaliana roots ... 82 2e-022
emb|BX824879.1|CNS0A7RK Arabidopsis thaliana Full-length cD... 107 4e-022
>ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTHASE-LIKE 12);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT5G13000 (ATGSL12) mRNA, complete cds
Length = 6194
Score = 222 bits (480), Expect = 7e-057
Identities = 87/105 (82%), Positives = 98/105 (93%)
Frame = +1 / +3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
MT+ DI VCILAFMPTGWG+LLIAQA +PV+H+ G WGS++ LARGYEI+MGLLLFTP+A
Sbjct: 5730 MTIQDIIVCILAFMPTGWGMLLIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVA 5909
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGH+KDR +RNKE*
Sbjct: 5910 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHRKDRSSRNKE* 6044
Score = 117 bits (251), Expect = 3e-025
Identities = 58/105 (55%), Positives = 64/105 (60%)
Frame = -2 / -2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLFR RS PPRIREI RPLL A L SI VWNSDTNGN A+ A GVN
Sbjct: 6043 HSLFREERSLR*PPRIREI*RPLLKA*LKSIRVWNSDTNGNHAKNATGVNSNSPITISYP 5864
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVM 48
L +PQ+P L TG A AI S P PVG+KAR+ T MS VM
Sbjct: 5863 RARVLTDPQNPAL*TTGLHACAIKSIPQPVGIKARIHTIMSCIVM 5729
>gb|AV534683.1|AV534683 AV534683 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB084c02F 3', mRNA sequence
Length = 455
Score = 217 bits (469), Expect = 2e-055
Identities = 85/101 (84%), Positives = 95/101 (94%)
Frame = +1 / -3
Query: 61 DIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAW 240
DI VCILAFMPTGWG+LLIAQA +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLAW
Sbjct: 453 DIIVCILAFMPTGWGMLLIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAW 274
Query: 241 FPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
FPFVSEFQTRMLFNQAFSRGLQISRILGGH+KDR +RNKE*
Sbjct: 273 FPFVSEFQTRMLFNQAFSRGLQISRILGGHRKDRSSRNKE* 151
Score = 114 bits (244), Expect = 3e-024
Identities = 56/101 (55%), Positives = 62/101 (61%)
Frame = -2 / +2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLFR RS PPRIREI RPLL A L SI VWNSDTNGN A+ A GVN
Sbjct: 152 HSLFREERSLR*PPRIREI*RPLLKA*LKSIRVWNSDTNGNHAKNATGVNSNSPITISYP 331
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMS 60
L +PQ+P L TG A AI S P PVG+KAR+ T MS
Sbjct: 332 RARVLTDPQNPAL*TTGLHACAIKSIPQPVGIKARIHTIMS 454
>gb|AV546514.1|AV546514 AV546514 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL15c03F 3', mRNA sequence
Length = 544
Score = 210 bits (452), Expect = 5e-053
Identities = 81/107 (75%), Positives = 98/107 (91%)
Frame = +1 / -1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P +T+ D+F+C+LAFMPTGWG+LLIAQA +P+I + G+W S++ LARGYEI+MGLLLFTP
Sbjct: 448 PLITIKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTP 269
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR ++NKE*
Sbjct: 268 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 128
Score = 132 bits (283), Expect = 1e-029
Identities = 61/107 (57%), Positives = 66/107 (61%)
Frame = -2 / +3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREICRPLL AWL SILVWNSDT GNQA+ A GVN
Sbjct: 129 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 308
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
L + P WI G A A+ S PHPVGMKA MQ N S V+ G
Sbjct: 309 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQMNKSLIVIRG 449
>gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthase 1 catalytic subunit (CalS1)
mRNA, complete cds
Length = 6007
Score = 210 bits (452), Expect = 5e-053
Identities = 81/107 (75%), Positives = 98/107 (91%)
Frame = +1 / +1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P +T+ D+F+C+LAFMPTGWG+LLIAQA +P+I + G+W S++ LARGYEI+MGLLLFTP
Sbjct: 5542 PLITIKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTP 5721
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR ++NKE*
Sbjct: 5722 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5862
Score = 132 bits (283), Expect = 1e-029
Identities = 61/107 (57%), Positives = 66/107 (61%)
Frame = -2 / -3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREICRPLL AWL SILVWNSDT GNQA+ A GVN
Sbjct: 5861 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 5682
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
L + P WI G A A+ S PHPVGMKA MQ N S V+ G
Sbjct: 5681 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQMNKSLIVIRG 5541
>emb|AX412747.1| Sequence 511 from Patent WO0222675
Length = 5577
Score = 210 bits (452), Expect = 5e-053
Identities = 81/107 (75%), Positives = 98/107 (91%)
Frame = +1 / +1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P +T+ D+F+C+LAFMPTGWG+LLIAQA +P+I + G+W S++ LARGYEI+MGLLLFTP
Sbjct: 5257 PLITIKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTP 5436
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR ++NKE*
Sbjct: 5437 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5577
Score = 132 bits (283), Expect = 1e-029
Identities = 61/107 (57%), Positives = 66/107 (61%)
Frame = -2 / -2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREICRPLL AWL SILVWNSDT GNQA+ A GVN
Sbjct: 5576 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 5397
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
L + P WI G A A+ S PHPVGMKA MQ N S V+ G
Sbjct: 5396 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQMNKSLIVIRG 5256
>emb|AX508002.1| Sequence 2697 from Patent WO0216655
Length = 5577
Score = 210 bits (452), Expect = 5e-053
Identities = 81/107 (75%), Positives = 98/107 (91%)
Frame = +1 / +1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P +T+ D+F+C+LAFMPTGWG+LLIAQA +P+I + G+W S++ LARGYEI+MGLLLFTP
Sbjct: 5257 PLITIKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTP 5436
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR ++NKE*
Sbjct: 5437 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5577
Score = 132 bits (283), Expect = 1e-029
Identities = 61/107 (57%), Positives = 66/107 (61%)
Frame = -2 / -2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREICRPLL AWL SILVWNSDT GNQA+ A GVN
Sbjct: 5576 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 5397
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
L + P WI G A A+ S PHPVGMKA MQ N S V+ G
Sbjct: 5396 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQMNKSLIVIRG 5256
>ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHASE 1); transferase,
transferring glycosyl groups AT1G05570 (CALS1) mRNA,
complete cds
Length = 6022
Score = 210 bits (452), Expect = 5e-053
Identities = 81/107 (75%), Positives = 98/107 (91%)
Frame = +1 / +1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P +T+ D+F+C+LAFMPTGWG+LLIAQA +P+I + G+W S++ LARGYEI+MGLLLFTP
Sbjct: 5542 PLITIKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTP 5721
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR ++NKE*
Sbjct: 5722 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5862
Score = 132 bits (283), Expect = 1e-029
Identities = 61/107 (57%), Positives = 66/107 (61%)
Frame = -2 / -3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREICRPLL AWL SILVWNSDT GNQA+ A GVN
Sbjct: 5861 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 5682
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
L + P WI G A A+ S PHPVGMKA MQ N S V+ G
Sbjct: 5681 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQMNKSLIVIRG 5541
>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project)
Length = 90020
Score = 177 bits (380), Expect(2) = 1e-052
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +1 / -1
Query: 109 LLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 288
L IAQA +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQA
Sbjct: 62516 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 62337
Query: 289 FSRGLQISRILGGHKKDRGTRNKE* 363
FSRGLQISRILGGH+KDR +RNKE*
Sbjct: 62336 FSRGLQISRILGGHRKDRSSRNKE* 62262
Score = 90.9 bits (192), Expect(2) = 5e-021
Identities = 45/83 (54%), Positives = 49/83 (59%)
Frame = -2 / +1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLFR RS PPRIREI RPLL A L SI VWNSDTNGN A+ A GVN
Sbjct: 62263 HSLFREERSLR*PPRIREI*RPLLKA*LKSIRVWNSDTNGNHAKNATGVNSNSPITISYP 62442
Query: 182 XXXALIEPQSPVLWITGRIAWAI 114
L +PQ+P L TG A AI
Sbjct: 62443 RARVLTDPQNPAL*TTGLHACAI 62511
Score = 51.9 bits (107), Expect(2) = 1e-052
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +1 / -1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQ 123
MT+ DI VCILAFMPTGWG+LL+++
Sbjct: 62675 MTIQDIIVCILAFMPTGWGMLLVSK 62601
Score = 32.2 bits (64), Expect(2) = 5e-021
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1 / +3
Query: 114 QQQTPSSGHESKDANKYVQHRH 49
Q+ P+ GH+ KD + YV +RH
Sbjct: 62610 QEHPPTCGHKGKDTHNYVLYRH 62675
>gb|AV535768.1|AV535768 AV535768 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB101h07F 3', mRNA sequence
Length = 533
Score = 207 bits (447), Expect = 3e-052
Identities = 82/105 (78%), Positives = 95/105 (90%)
Frame = +1 / -3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+T DIF+C+LAFMPTGWG+LLIAQA +P+I + G W S++ LARGYEILMGLLLFTP+A
Sbjct: 435 LTPKDIFLCMLAFMPTGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVA 256
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR ++NKE*
Sbjct: 255 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 121
Score = 119 bits (254), Expect = 1e-025
Identities = 58/101 (57%), Positives = 64/101 (63%)
Frame = -2 / +2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREIC PLLNAWL SILV NSDTNGNQAR A GVN
Sbjct: 122 HSLFLEERSFL*PPRIREICNPLLNAWLKSILV*NSDTNGNQARNATGVNKSKPMRIS*P 301
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMS 60
L + Q+P I G A A+S+ P PVGMKA +Q MS
Sbjct: 302 RASVLTDDQNPSR*IRGLHACAMSNIPQPVGMKASIQRKMS 424
>dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for putative glucan synthase,
complete cds, clone: RAFL16-92-B13
Length = 2390
Score = 207 bits (447), Expect = 3e-052
Identities = 82/105 (78%), Positives = 95/105 (90%)
Frame = +1 / +3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+T DIF+C+LAFMPTGWG+LLIAQA +P+I + G W S++ LARGYEILMGLLLFTP+A
Sbjct: 1956 LTPKDIFLCMLAFMPTGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVA 2135
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR ++NKE*
Sbjct: 2136 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 2270
Score = 119 bits (254), Expect = 1e-025
Identities = 58/101 (57%), Positives = 64/101 (63%)
Frame = -2 / -2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREIC PLLNAWL SILV NSDTNGNQAR A GVN
Sbjct: 2269 HSLFLEERSFL*PPRIREICNPLLNAWLKSILV*NSDTNGNQARNATGVNKSKPMRIS*P 2090
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMS 60
L + Q+P I G A A+S+ P PVGMKA +Q MS
Sbjct: 2089 RASVLTDDQNPSR*IRGLHACAMSNIPQPVGMKASIQRKMS 1967
>ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTHASE-LIKE 3);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G31960 (ATGSL03) mRNA, complete cds
Length = 5880
Score = 207 bits (447), Expect = 3e-052
Identities = 82/105 (78%), Positives = 95/105 (90%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+T DIF+C+LAFMPTGWG+LLIAQA +P+I + G W S++ LARGYEILMGLLLFTP+A
Sbjct: 5566 LTPKDIFLCMLAFMPTGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVA 5745
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR ++NKE*
Sbjct: 5746 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5880
Score = 119 bits (254), Expect = 1e-025
Identities = 58/101 (57%), Positives = 64/101 (63%)
Frame = -2 / -2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREIC PLLNAWL SILV NSDTNGNQAR A GVN
Sbjct: 5879 HSLFLEERSFL*PPRIREICNPLLNAWLKSILV*NSDTNGNQARNATGVNKSKPMRIS*P 5700
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMS 60
L + Q+P I G A A+S+ P PVGMKA +Q MS
Sbjct: 5699 RASVLTDDQNPSR*IRGLHACAMSNIPQPVGMKASIQRKMS 5577
>emb|AX651854.1| Sequence 720 from Patent WO03000898
Length = 5892
Score = 171 bits (367), Expect(2) = 4e-050
Identities = 67/82 (81%), Positives = 76/82 (92%)
Frame = +1 / +1
Query: 118 AQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSR 297
A A +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFSR
Sbjct: 5647 ALACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSR 5826
Query: 298 GLQISRILGGHKKDRGTRNKE* 363
GLQISRILGGH+KDR +RNKE*
Sbjct: 5827 GLQISRILGGHRKDRSSRNKE* 5892
Score = 49.6 bits (102), Expect(2) = 4e-050
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLL 114
MT+ DI VCILAFMPTGWG+LL
Sbjct: 5588 MTIQDIIVCILAFMPTGWGMLL 5653
>gb|AI996136.1|AI996136 701550178 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701550178, mRNA sequence
Length = 626
Score = 199 bits (429), Expect = 8e-050
Identities = 78/107 (72%), Positives = 96/107 (89%)
Frame = +1 / -3
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTP 222
P +T+ D+F+C++AFMPTG +LLIAQA +P+I + G+W S++ LARGYEI+MGLLLFTP
Sbjct: 495 PLITIKDLFICMVAFMPTGXXMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTP 316
Query: 223 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
+AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG +KDR ++NKE*
Sbjct: 315 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 175
Score = 129 bits (276), Expect = 1e-028
Identities = 60/107 (56%), Positives = 65/107 (60%)
Frame = -2 / +2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREICRPLL AWL SILVWNSDT GNQA+ A GVN
Sbjct: 176 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 355
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVMPG 42
L + P WI G A A+ S HPVGMKA MQ N S V+ G
Sbjct: 356 RASVLTDDHIPSCWIRGLHACAMRSXXHPVGMKATMQMNKSLIVIRG 496
>gb|CW796846.1|CW796846 WiscDsLox468C6 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 751
Score = 177 bits (380), Expect(2) = 1e-049
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +1 / -2
Query: 109 LLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 288
L IAQA +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQA
Sbjct: 279 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 100
Query: 289 FSRGLQISRILGGHKKDRGTRNKE* 363
FSRGLQISRILGGH+KDR +RNKE*
Sbjct: 99 FSRGLQISRILGGHRKDRSSRNKE* 25
Score = 42.3 bits (86), Expect(2) = 1e-049
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1 / -2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQ 123
MT+ DI ILAFMP GWG+LL+++
Sbjct: 438 MTIQDIIXXILAFMPXGWGMLLVSK 364
>gb|AQ959103.1|AQ959103 LEREH30TRB LERE Arabidopsis thaliana genomic clone LEREH30, DNA
sequence
Length = 538
Score = 166 bits (358), Expect(2) = 1e-049
Identities = 65/80 (81%), Positives = 74/80 (92%)
Frame = +1 / -3
Query: 109 LLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 288
L IAQA +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQA
Sbjct: 248 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 69
Query: 289 FSRGLQISRILGGHKKDRGT 348
FSRGLQISRILGGH+KDR +
Sbjct: 68 FSRGLQISRILGGHRKDRSS 9
Score = 51.9 bits (107), Expect(2) = 1e-049
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +1 / -3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQ 123
MT+ DI VCILAFMPTGWG+LL+++
Sbjct: 407 MTIQDIIVCILAFMPTGWGMLLVSK 333
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 163 bits (351), Expect(2) = 2e-048
Identities = 65/83 (78%), Positives = 76/83 (91%)
Frame = +1 / -2
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQA +P+I + G+W S++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 1648004 IAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 1647825
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGG +KDR ++NKE*
Sbjct: 1647824 RGLQISRILGGQRKDRSSKNKE* 1647756
Score = 125 bits (267), Expect(2) = 8e-035
Identities = 54/87 (62%), Positives = 62/87 (71%)
Frame = +1 / +1
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
+L I QA+R V G W S+K L R YE +MGL++FTPIA L+WFPFVSEFQTR+LFNQ
Sbjct: 1988638 VLKIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFNQ 1988817
Query: 286 AFSRGLQISRILGGHKKDRGTRNKE*G 366
AFSRGLQIS IL G K K *G
Sbjct: 1988818 AFSRGLQISMILAGKKDKETPSTK**G 1988898
Score = 102 bits (217), Expect(2) = 3e-025
Identities = 47/83 (56%), Positives = 50/83 (60%)
Frame = -2 / +1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREICRPLL AWL SILVWNSDT GNQA+ A GVN
Sbjct: 1647757 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 1647936
Query: 182 XXXALIEPQSPVLWITGRIAWAI 114
L + P WI G A AI
Sbjct: 1647937 RASVLTDDHIPSCWIRGLHACAI 1648005
Score = 51.0 bits (105), Expect(2) = 2e-048
Identities = 16/26 (61%), Positives = 24/26 (92%)
Frame = +1 / -3
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIA 120
P +T+ D+F+C+LAFMPTGWG+LL++
Sbjct: 1648174 PLITIKDLFICMLAFMPTGWGMLLVS 1648097
Score = 44.1 bits (90), Expect(2) = 8e-035
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +1 / +1
Query: 46 GMTVLDIFVCILAFMPTGWGLLLIA 120
G+T+ D+F ILAF+PTGW +LL++
Sbjct: 1988488 GLTISDLFASILAFLPTGWAILLVS 1988562
Score = 35.0 bits (70), Expect(2) = 3e-025
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / +3
Query: 110 SKPHPVGMKARMQTNMSSTVMPG 42
S PHPVGMKA MQ N S V+ G
Sbjct: 1648107 SIPHPVGMKASMQMNKSLIVIRG 1648175
>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete
sequence
Length = 103223
Score = 163 bits (351), Expect(2) = 2e-048
Identities = 65/83 (78%), Positives = 76/83 (91%)
Frame = +1 / -3
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQA +P+I + G+W S++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 29652 IAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 29473
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGG +KDR ++NKE*
Sbjct: 29472 RGLQISRILGGQRKDRSSKNKE* 29404
Score = 102 bits (217), Expect(2) = 3e-025
Identities = 47/83 (56%), Positives = 50/83 (60%)
Frame = -2 / +2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREICRPLL AWL SILVWNSDT GNQA+ A GVN
Sbjct: 29405 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 29584
Query: 182 XXXALIEPQSPVLWITGRIAWAI 114
L + P WI G A AI
Sbjct: 29585 RASVLTDDHIPSCWIRGLHACAI 29653
Score = 51.0 bits (105), Expect(2) = 2e-048
Identities = 16/26 (61%), Positives = 24/26 (92%)
Frame = +1 / -1
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIA 120
P +T+ D+F+C+LAFMPTGWG+LL++
Sbjct: 29822 PLITIKDLFICMLAFMPTGWGMLLVS 29745
Score = 35.0 bits (70), Expect(2) = 3e-025
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / +1
Query: 110 SKPHPVGMKARMQTNMSSTVMPG 42
S PHPVGMKA MQ N S V+ G
Sbjct: 29755 SIPHPVGMKASMQMNKSLIVIRG 29823
>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I,
complete sequence
Length = 84203
Score = 163 bits (351), Expect(2) = 2e-048
Identities = 65/83 (78%), Positives = 76/83 (91%)
Frame = +1 / -1
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQA +P+I + G+W S++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 80201 IAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 80022
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGG +KDR ++NKE*
Sbjct: 80021 RGLQISRILGGQRKDRSSKNKE* 79953
Score = 102 bits (217), Expect(2) = 3e-025
Identities = 47/83 (56%), Positives = 50/83 (60%)
Frame = -2 / +1
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREICRPLL AWL SILVWNSDT GNQA+ A GVN
Sbjct: 79954 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 80133
Query: 182 XXXALIEPQSPVLWITGRIAWAI 114
L + P WI G A AI
Sbjct: 80134 RASVLTDDHIPSCWIRGLHACAI 80202
Score = 51.0 bits (105), Expect(2) = 2e-048
Identities = 16/26 (61%), Positives = 24/26 (92%)
Frame = +1 / -2
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIA 120
P +T+ D+F+C+LAFMPTGWG+LL++
Sbjct: 80371 PLITIKDLFICMLAFMPTGWGMLLVS 80294
Score = 35.0 bits (70), Expect(2) = 3e-025
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / +3
Query: 110 SKPHPVGMKARMQTNMSSTVMPG 42
S PHPVGMKA MQ N S V+ G
Sbjct: 80304 SIPHPVGMKASMQMNKSLIVIRG 80372
>emb|AX441264.1| Sequence 18 from Patent EP1209228
Length = 2000
Score = 163 bits (351), Expect(2) = 3e-048
Identities = 65/83 (78%), Positives = 76/83 (91%)
Frame = +1 / +2
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQA +P+I + G+W S++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 1106 IAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 1285
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGG +KDR ++NKE*
Sbjct: 1286 RGLQISRILGGQRKDRSSKNKE* 1354
Score = 102 bits (217), Expect(2) = 3e-025
Identities = 47/83 (56%), Positives = 50/83 (60%)
Frame = -2 / -3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREICRPLL AWL SILVWNSDT GNQA+ A GVN
Sbjct: 1353 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 1174
Query: 182 XXXALIEPQSPVLWITGRIAWAI 114
L + P WI G A AI
Sbjct: 1173 RASVLTDDHIPSCWIRGLHACAI 1105
Score = 51.0 bits (105), Expect(2) = 3e-048
Identities = 16/26 (61%), Positives = 24/26 (92%)
Frame = +1 / +3
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIA 120
P +T+ D+F+C+LAFMPTGWG+LL++
Sbjct: 936 PLITIKDLFICMLAFMPTGWGMLLVS 1013
Score = 35.0 bits (70), Expect(2) = 3e-025
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 110 SKPHPVGMKARMQTNMSSTVMPG 42
S PHPVGMKA MQ N S V+ G
Sbjct: 1003 SIPHPVGMKASMQMNKSLIVIRG 935
>dbj|BD181338.1| A stress-responsive promoter
Length = 2000
Score = 163 bits (351), Expect(2) = 3e-048
Identities = 65/83 (78%), Positives = 76/83 (91%)
Frame = +1 / +2
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQA +P+I + G+W S++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 1106 IAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 1285
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGG +KDR ++NKE*
Sbjct: 1286 RGLQISRILGGQRKDRSSKNKE* 1354
Score = 102 bits (217), Expect(2) = 3e-025
Identities = 47/83 (56%), Positives = 50/83 (60%)
Frame = -2 / -3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREICRPLL AWL SILVWNSDT GNQA+ A GVN
Sbjct: 1353 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 1174
Query: 182 XXXALIEPQSPVLWITGRIAWAI 114
L + P WI G A AI
Sbjct: 1173 RASVLTDDHIPSCWIRGLHACAI 1105
Score = 51.0 bits (105), Expect(2) = 3e-048
Identities = 16/26 (61%), Positives = 24/26 (92%)
Frame = +1 / +3
Query: 43 PGMTVLDIFVCILAFMPTGWGLLLIA 120
P +T+ D+F+C+LAFMPTGWG+LL++
Sbjct: 936 PLITIKDLFICMLAFMPTGWGMLLVS 1013
Score = 35.0 bits (70), Expect(2) = 3e-025
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 110 SKPHPVGMKARMQTNMSSTVMPG 42
S PHPVGMKA MQ N S V+ G
Sbjct: 1003 SIPHPVGMKASMQMNKSLIVIRG 935
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete
sequence
Length = 103194
Score = 165 bits (355), Expect(2) = 6e-048
Identities = 67/86 (77%), Positives = 76/86 (88%)
Frame = +1 / -1
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
L IAQA +P+I + G W S++ LARGYEILMGLLLFTP+AFLAWFPFVSEFQTRMLFNQ
Sbjct: 89601 LFKIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWFPFVSEFQTRMLFNQ 89422
Query: 286 AFSRGLQISRILGGHKKDRGTRNKE* 363
AFSRGLQISRILGG +KDR ++NKE*
Sbjct: 89421 AFSRGLQISRILGGQRKDRSSKNKE* 89344
Score = 96.4 bits (204), Expect(2) = 3e-021
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = -2 / +2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIREIC PLLNAWL SILV NSDTNGNQAR A GVN
Sbjct: 89345 HSLFLEERSFL*PPRIREICNPLLNAWLKSILV*NSDTNGNQARNATGVNKSKPMRIS*P 89524
Query: 182 XXXALIEPQSPVLWITGRIAWAI 114
L + Q+P I G A AI
Sbjct: 89525 RASVLTDDQNPSR*IRGLHACAI 89593
Score = 47.8 bits (98), Expect(2) = 6e-048
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = +1 / -2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIA 120
+T DIF+C+LAFMPTGWG+LL++
Sbjct: 89777 LTPKDIFLCMLAFMPTGWGMLLVS 89706
Score = 27.2 bits (53), Expect(2) = 3e-021
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / +1
Query: 113 SSKPHPVGMKARMQTNMS 60
S+ P PVGMKA +Q MS
Sbjct: 89713 SNIPQPVGMKASIQRKMS 89766
>emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB52ZD04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1385
Score = 192 bits (413), Expect = 1e-047
Identities = 77/105 (73%), Positives = 90/105 (85%)
Frame = +1 / +3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+T +IF+C LAFMPTGWG+ LI QA +P+I + G W S++ LARGYEILMGLLLFTP+A
Sbjct: 1002 LTPKNIFLCRLAFMPTGWGM*LIEQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVA 1181
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
LAWFPFVSEFQTRMLFNQAFSRGLQ SRILGG +KDR ++NKE*
Sbjct: 1182 SLAWFPFVSEFQTRMLFNQAFSRGLQFSRILGGQRKDRSSKNKE* 1316
Score = 111 bits (237), Expect = 2e-023
Identities = 55/100 (55%), Positives = 61/100 (61%)
Frame = -2 / -2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLF RSFL PPRIRE C PLLNAWL SILV NSDTNGNQAR A GVN
Sbjct: 1315 HSLFLEERSFL*PPRIRENCNPLLNAWLKSILV*NSDTNGNQARDATGVNKSKPMRIS*P 1136
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNM 63
L + Q+P I G A ++S P PVGMKA +Q M
Sbjct: 1135 RASVLTDDQNPSR*IRGLHACSMSYIPQPVGMKASLQRKM 1016
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 177 bits (380), Expect = 4e-043
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +1 / -3
Query: 109 LLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 288
L IAQA +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQA
Sbjct: 3923675 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 3923496
Query: 289 FSRGLQISRILGGHKKDRGTRNKE* 363
FSRGLQISRILGGH+KDR +RNKE*
Sbjct: 3923495 FSRGLQISRILGGHRKDRSSRNKE* 3923421
Score = 131 bits (281), Expect = 2e-029
Identities = 52/83 (62%), Positives = 67/83 (80%)
Frame = +1 / +3
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQ+ +P+I + G+W + LA Y+++MG LLF PIAF+AWFPF+SEFQTRMLFNQAFS
Sbjct: 13467057 IAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFS 13467236
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGL ISRIL G +K R ++NK+*
Sbjct: 13467237 RGLHISRILSGQRKHRSSKNKD* 13467305
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 177 bits (380), Expect = 4e-043
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +1 / -1
Query: 109 LLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 288
L IAQA +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQA
Sbjct: 4110702 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 4110523
Query: 289 FSRGLQISRILGGHKKDRGTRNKE* 363
FSRGLQISRILGGH+KDR +RNKE*
Sbjct: 4110522 FSRGLQISRILGGHRKDRSSRNKE* 4110448
Score = 131 bits (281), Expect = 2e-029
Identities = 52/83 (62%), Positives = 67/83 (80%)
Frame = +1 / +3
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQ+ +P+I + G+W + LA Y+++MG LLF PIAF+AWFPF+SEFQTRMLFNQAFS
Sbjct: 14550912 IAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFS 14551091
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGL ISRIL G +K R ++NK+*
Sbjct: 14551092 RGLHISRILSGQRKHRSSKNKD* 14551160
>ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTHASE-LIKE 9);
1,3-beta-glucan synthase AT5G36870 (ATGSL09) mRNA,
complete cds
Length = 5589
Score = 169 bits (363), Expect = 1e-040
Identities = 65/101 (64%), Positives = 84/101 (83%)
Frame = +1 / +1
Query: 61 DIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAW 240
D+F+C+LA +PTGWGLLLIAQ+ +P+I + G+W + LA Y+++MG LLF PIAF+AW
Sbjct: 5287 DVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAW 5466
Query: 241 FPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
FPF+SEFQTRMLFNQAFSRGL ISRIL G +K R ++NK+*
Sbjct: 5467 FPFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD* 5589
Score = 107 bits (229), Expect = 3e-022
Identities = 52/100 (52%), Positives = 57/100 (57%)
Frame = -2 / -2
Query: 359 SLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXXX 180
SLF R FL P RIREICRPLL AWL SILVWNSD NGNQA A+G+N
Sbjct: 5585 SLFLEERCFL*PLRIREICRPLLKAWLKSILVWNSDMNGNQAINAIGINKREPITRS*TQ 5406
Query: 179 XXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMS 60
+ + P I G AISS PHPVG+ A MQ S
Sbjct: 5405 ANVITQDHIPGC*IRGLQDCAISSNPHPVGINASMQRKTS 5286
>gb|AQ959102.1|AQ959102 LEREH30TR LERE Arabidopsis thaliana genomic clone LEREH30, DNA
sequence
Length = 382
Score = 166 bits (358), Expect = 5e-040
Identities = 65/80 (81%), Positives = 74/80 (92%)
Frame = +1 / -3
Query: 109 LLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 288
L IAQA +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQA
Sbjct: 248 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 69
Query: 289 FSRGLQISRILGGHKKDRGT 348
FSRGLQISRILGGH+KDR +
Sbjct: 68 FSRGLQISRILGGHRKDRSS 9
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 165 bits (355), Expect = 1e-039
Identities = 67/86 (77%), Positives = 76/86 (88%)
Frame = +1 / +2
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
L IAQA +P+I + G W S++ LARGYEILMGLLLFTP+AFLAWFPFVSEFQTRMLFNQ
Sbjct: 13606886 LFKIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWFPFVSEFQTRMLFNQ 13607065
Query: 286 AFSRGLQISRILGGHKKDRGTRNKE* 363
AFSRGLQISRILGG +KDR ++NKE*
Sbjct: 13607066 AFSRGLQISRILGGQRKDRSSKNKE* 13607143
Score = 164 bits (352), Expect = 3e-039
Identities = 64/98 (65%), Positives = 79/98 (80%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+TV DI +LAF+PTGW LL I+Q RP++ G+WGS+KALARGYE +MG+++F P+
Sbjct: 5712920 LTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVT 5713099
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 342
LAWFPFVSEFQTR+LFNQAFSRGLQI RIL G KK +
Sbjct: 5713100 VLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKQK 5713213
Score = 133 bits (285), Expect = 6e-030
Identities = 49/95 (51%), Positives = 72/95 (75%)
Frame = +1 / -3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+++ D+F C+L F+PTGW LL +A + V+ GLW +++ R Y+ MG+L+F+PIA
Sbjct: 15462316 LSIPDMFACVLGFIPTGWALLSLAITWKQVLRVLGLWETVREFGRIYDAAMGMLIFSPIA 15462137
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
L+WFPF+S FQ+R+LFNQAFSRGL+IS IL G++
Sbjct: 15462136 LLSWFPFISTFQSRLLFNQAFSRGLEISIILAGNR 15462032
>gb|AU228526.1|AU228526 AU228526 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-26-N18 3',
mRNA sequence
Length = 423
Score = 135 bits (290), Expect(2) = 1e-039
Identities = 55/63 (87%), Positives = 61/63 (96%)
Frame = +1 / -3
Query: 175 LARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRN 354
LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFSRG+QISRILGG +KDR ++N
Sbjct: 316 LARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGVQISRILGGQRKDRSSKN 137
Query: 355 KE* 363
KE*
Sbjct: 136 KE* 128
Score = 91.8 bits (194), Expect(2) = 1e-021
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = -2 / +3
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVN 213
+SLF RSFL PPRIREIC PLL AWL SILVWNSDT GNQA+ A GVN
Sbjct: 129 HSLFFEDRSFL*PPRIREICTPLLKAWLKSILVWNSDTKGNQAKNATGVN 278
Score = 49.6 bits (102), Expect(2) = 1e-039
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +1 / -2
Query: 67 FVCILAFMPTGWGLLLIAQAI 129
F+C+LAFMPTGWG+LLIAQA+
Sbjct: 422 FICMLAFMPTGWGMLLIAQAL 360
Score = 33.6 bits (67), Expect(2) = 1e-021
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -2 / +1
Query: 125 AWAISSKPHPVGMKARMQTN 66
A A+ S PHPVGMKA MQ N
Sbjct: 364 ACAMRSIPHPVGMKASMQMN 423
>gb|AQ959101.1|AQ959101 LEREH30TFB LERE Arabidopsis thaliana genomic clone LEREH30, DNA
sequence
Length = 711
Score = 132 bits (283), Expect(2) = 3e-039
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +1 / +2
Query: 109 LLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 288
L IAQA +PV+H+ G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQA
Sbjct: 521 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 700
Query: 289 FSR 297
FSR
Sbjct: 701 FSR 709
Score = 51.9 bits (107), Expect(2) = 3e-039
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQ 123
MT+ DI VCILAFMPTGWG+LL+++
Sbjct: 362 MTIQDIIVCILAFMPTGWGMLLVSK 436
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete
sequence
Length = 104009
Score = 164 bits (352), Expect = 3e-039
Identities = 64/98 (65%), Positives = 79/98 (80%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+TV DI +LAF+PTGW LL I+Q RP++ G+WGS+KALARGYE +MG+++F P+
Sbjct: 14063 LTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVT 14242
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 342
LAWFPFVSEFQTR+LFNQAFSRGLQI RIL G KK +
Sbjct: 14243 VLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKQK 14356
>gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F5 map PR1, complete
sequence
Length = 102585
Score = 164 bits (352), Expect = 3e-039
Identities = 64/98 (65%), Positives = 79/98 (80%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+TV DI +LAF+PTGW LL I+Q RP++ G+WGS+KALARGYE +MG+++F P+
Sbjct: 96265 LTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVT 96444
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 342
LAWFPFVSEFQTR+LFNQAFSRGLQI RIL G KK +
Sbjct: 96445 VLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKQK 96558
>tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase (LAP1) mRNA, complete cds
Length = 5772
Score = 164 bits (352), Expect = 3e-039
Identities = 64/98 (65%), Positives = 79/98 (80%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+TV DI +LAF+PTGW LL I+Q RP++ G+WGS+KALARGYE +MG+++F P+
Sbjct: 5476 LTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVT 5655
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 342
LAWFPFVSEFQTR+LFNQAFSRGLQI RIL G KK +
Sbjct: 5656 VLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKQK 5769
>gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, complete cds
Length = 5950
Score = 164 bits (352), Expect = 3e-039
Identities = 64/98 (65%), Positives = 79/98 (80%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+TV DI +LAF+PTGW LL I+Q RP++ G+WGS+KALARGYE +MG+++F P+
Sbjct: 5629 LTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVT 5808
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 342
LAWFPFVSEFQTR+LFNQAFSRGLQI RIL G KK +
Sbjct: 5809 VLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKQK 5922
>ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synthase AT2G13680 mRNA,
complete cds
Length = 5772
Score = 164 bits (352), Expect = 3e-039
Identities = 64/98 (65%), Positives = 79/98 (80%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+TV DI +LAF+PTGW LL I+Q RP++ G+WGS+KALARGYE +MG+++F P+
Sbjct: 5476 LTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVT 5655
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 342
LAWFPFVSEFQTR+LFNQAFSRGLQI RIL G KK +
Sbjct: 5656 VLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKQK 5769
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 163 bits (351), Expect = 4e-039
Identities = 65/83 (78%), Positives = 76/83 (91%)
Frame = +1 / -1
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQA +P+I + G+W S++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 1648127 IAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 1647948
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGLQISRILGG +KDR ++NKE*
Sbjct: 1647947 RGLQISRILGGQRKDRSSKNKE* 1647879
Score = 125 bits (267), Expect = 2e-027
Identities = 54/87 (62%), Positives = 62/87 (71%)
Frame = +1 / +1
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
+L I QA+R V G W S+K L R YE +MGL++FTPIA L+WFPFVSEFQTR+LFNQ
Sbjct: 1988791 VLKIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFNQ 1988970
Query: 286 AFSRGLQISRILGGHKKDRGTRNKE*G 366
AFSRGLQIS IL G K K *G
Sbjct: 1988971 AFSRGLQISMILAGKKDKETPSTK**G 1989051
>ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTHASE-LIKE 7);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT1G06490 (ATGSL07) mRNA, complete cds
Length = 5802
Score = 162 bits (348), Expect = 1e-038
Identities = 64/96 (66%), Positives = 76/96 (79%)
Frame = +1 / +1
Query: 46 GMTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPI 225
G+T+ D+F ILAF+PTGW +LLI QA+R V G W S+K L R YE +MGL++FTPI
Sbjct: 5488 GLTISDLFASILAFLPTGWAILLIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPI 5667
Query: 226 AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
A L+WFPFVSEFQTR+LFNQAFSRGLQIS IL G K
Sbjct: 5668 AVLSWFPFVSEFQTRLLFNQAFSRGLQISMILAGKK 5775
>gb|AQ957761.1|AQ957761 LERAR55TF LERA Arabidopsis thaliana genomic clone LERAR55, DNA
sequence
Length = 668
Score = 157 bits (338), Expect = 3e-037
Identities = 60/89 (67%), Positives = 74/89 (83%)
Frame = +1 / +3
Query: 76 ILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVS 255
+LAF+PTGW LL I+Q RP++ G+WGS+KALARGYE +MG+++F P+ LAWFPFVS
Sbjct: 15 LLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWFPFVS 194
Query: 256 EFQTRMLFNQAFSRGLQISRILGGHKKDR 342
EFQTR+LFNQAFSRGLQI RIL G KK +
Sbjct: 195 EFQTRLLFNQAFSRGLQIQRILAGGKKQK 281
>gb|AI995793.1|AI995793 701548593 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701548593, mRNA sequence
Length = 618
Score = 155 bits (333), Expect = 1e-036
Identities = 60/99 (60%), Positives = 79/99 (79%)
Frame = +1 / -3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V DIF C+LAF+PTGWG+L IA A +PV+ + G+W SI++LAR Y+ LMG+L+F P+A
Sbjct: 475 LSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVA 296
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPFVS FQTRM+FNQAFSRGL+IS IL G + G
Sbjct: 295 LCSWFPFVSTFQTRMMFNQAFSRGLEISLILAGDNPNSG 179
>gb|AV523506.1|AV523506 AV523506 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL30a04F 3', mRNA
sequence
Length = 626
Score = 155 bits (333), Expect = 1e-036
Identities = 60/99 (60%), Positives = 79/99 (79%)
Frame = +1 / -3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V DIF C+LAF+PTGWG+L IA A +PV+ + G+W SI++LAR Y+ LMG+L+F P+A
Sbjct: 471 LSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVA 292
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPFVS FQTRM+FNQAFSRGL+IS IL G + G
Sbjct: 291 LCSWFPFVSTFQTRMMFNQAFSRGLEISLILAGDNPNSG 175
>gb|AY099734.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1780
Score = 155 bits (333), Expect = 1e-036
Identities = 60/99 (60%), Positives = 79/99 (79%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V DIF C+LAF+PTGWG+L IA A +PV+ + G+W SI++LAR Y+ LMG+L+F P+A
Sbjct: 1280 LSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVA 1459
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPFVS FQTRM+FNQAFSRGL+IS IL G + G
Sbjct: 1460 LCSWFPFVSTFQTRMMFNQAFSRGLEISLILAGDNPNSG 1576
>gb|BT000346.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1404
Score = 155 bits (333), Expect = 1e-036
Identities = 60/99 (60%), Positives = 79/99 (79%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V DIF C+LAF+PTGWG+L IA A +PV+ + G+W SI++LAR Y+ LMG+L+F P+A
Sbjct: 1009 LSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVA 1188
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPFVS FQTRM+FNQAFSRGL+IS IL G + G
Sbjct: 1189 LCSWFPFVSTFQTRMMFNQAFSRGLEISLILAGDNPNSG 1305
>dbj|AK221151.1| Arabidopsis thaliana mRNA for putative glucan synthase, complete
cds, clone: RAFL22-94-A16
Length = 1088
Score = 155 bits (333), Expect = 1e-036
Identities = 60/99 (60%), Positives = 79/99 (79%)
Frame = +1 / +3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V DIF C+LAF+PTGWG+L IA A +PV+ + G+W SI++LAR Y+ LMG+L+F P+A
Sbjct: 624 LSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVA 803
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPFVS FQTRM+FNQAFSRGL+IS IL G + G
Sbjct: 804 LCSWFPFVSTFQTRMMFNQAFSRGLEISLILAGDNPNSG 920
>ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTHASE-LIKE 10);
1,3-beta-glucan synthase AT3G07160 (ATGSL10) mRNA,
complete cds
Length = 5981
Score = 155 bits (333), Expect = 1e-036
Identities = 60/99 (60%), Positives = 79/99 (79%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V DIF C+LAF+PTGWG+L IA A +PV+ + G+W SI++LAR Y+ LMG+L+F P+A
Sbjct: 5494 LSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVA 5673
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPFVS FQTRM+FNQAFSRGL+IS IL G + G
Sbjct: 5674 LCSWFPFVSTFQTRMMFNQAFSRGLEISLILAGDNPNSG 5790
>emb|BX825904.1|CNS0A6G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL71ZB05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1053
Score = 153 bits (328), Expect = 7e-036
Identities = 59/93 (63%), Positives = 76/93 (81%)
Frame = +1 / +3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V DIF C+LAF+PTGWG+L IA A +PV+ + G+W SI+ LAR Y+ LMG+L+F P+A
Sbjct: 582 LSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRCLARLYDALMGMLIFLPVA 761
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG 327
+WFPFVS FQTRM+FNQAFSRGL+IS IL G
Sbjct: 762 LCSWFPFVSTFQTRMMFNQAFSRGLEISLILAG 860
>gb|AY085106.1| Arabidopsis thaliana clone 12977 mRNA, complete sequence
Length = 1267
Score = 152 bits (326), Expect = 1e-035
Identities = 59/99 (59%), Positives = 78/99 (78%)
Frame = +1 / +3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V DIF C+LAF+PTGWG+L IA A +PV+ + G+W SI++LAR Y+ LMG+L+F P+A
Sbjct: 780 LSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVA 959
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPFVS FQTRM+ NQAFSRGL+IS IL G + G
Sbjct: 960 LCSWFPFVSTFQTRMMXNQAFSRGLEISLILAGDNPNSG 1076
>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I,
complete sequence
Length = 93724
Score = 125 bits (267), Expect(2) = 8e-035
Identities = 54/87 (62%), Positives = 62/87 (71%)
Frame = +1 / -1
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
+L I QA+R V G W S+K L R YE +MGL++FTPIA L+WFPFVSEFQTR+LFNQ
Sbjct: 65218 VLKIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFNQ 65039
Query: 286 AFSRGLQISRILGGHKKDRGTRNKE*G 366
AFSRGLQIS IL G K K *G
Sbjct: 65038 AFSRGLQISMILAGKKDKETPSTK**G 64958
Score = 44.1 bits (90), Expect(2) = 8e-035
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +1 / -1
Query: 46 GMTVLDIFVCILAFMPTGWGLLLIA 120
G+T+ D+F ILAF+PTGW +LL++
Sbjct: 65368 GLTISDLFASILAFLPTGWAILLVS 65294
>ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTHASE-LIKE 11);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G59100 (ATGSL11) mRNA, complete cds
Length = 5805
Score = 145 bits (312), Expect = 1e-033
Identities = 58/103 (56%), Positives = 74/103 (71%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+T+ D+ +LAF+PTGW +LLI Q +R I G+W S+K L R YE +MGL++F PIA
Sbjct: 5494 LTLTDLSASVLAFLPTGWAILLIGQVLRSPIKALGVWDSVKELGRAYENIMGLVIFAPIA 5673
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNK 357
L+WFP VSEFQ R+LFNQAFSRGLQIS IL G K + +K
Sbjct: 5674 VLSWFPIVSEFQARLLFNQAFSRGLQISMILAGRKDKATSSHK 5802
>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8
Length = 70098
Score = 131 bits (281), Expect(2) = 1e-033
Identities = 52/83 (62%), Positives = 67/83 (80%)
Frame = +1 / +3
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IAQ+ +P+I + G+W + LA Y+++MG LLF PIAF+AWFPF+SEFQTRMLFNQAFS
Sbjct: 63498 IAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFS 63677
Query: 295 RGLQISRILGGHKKDRGTRNKE* 363
RGL ISRIL G +K R ++NK+*
Sbjct: 63678 RGLHISRILSGQRKHRSSKNKD* 63746
Score = 42.3 bits (86), Expect(2) = 1e-033
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = +1 / +2
Query: 61 DIFVCILAFMPTGWGLLLIA 120
D+F+C+LA +PTGWGLLL++
Sbjct: 63284 DVFLCMLALIPTGWGLLLVS 63343
>ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTHASE-LIKE 4);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G14570 (ATGSL04) mRNA, complete cds
Length = 5922
Score = 140 bits (301), Expect = 3e-032
Identities = 57/98 (58%), Positives = 72/98 (73%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
++V D+ V LAF+PTGWGL+LIAQA+RP I T LW + LAR Y+ MG++LF P+A
Sbjct: 5626 LSVKDLLVSCLAFLPTGWGLILIAQAVRPKIEGTSLWEFTQVLARAYDYGMGVVLFAPMA 5805
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 342
LAW P +S FQTR LFN+AF+R LQI IL G KK+R
Sbjct: 5806 ILAWLPIISAFQTRFLFNEAFNRRLQIQPILAGKKKNR 5919
>gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome III BAC T1B9 genomic sequence, complete
sequence
Length = 99128
Score = 115 bits (245), Expect(2) = 4e-032
Identities = 46/77 (59%), Positives = 60/77 (77%)
Frame = +1 / +3
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
IA A +PV+ + G+W SI++LAR Y+ LMG+L+F P+A +WFPFVS FQTRM+FNQAFS
Sbjct: 69405 IACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVSTFQTRMMFNQAFS 69584
Query: 295 RGLQISRILGGHKKDRG 345
RGL+IS IL G + G
Sbjct: 69585 RGLEISLILAGDNPNSG 69635
Score = 45.1 bits (92), Expect(2) = 4e-032
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIA 120
++V DIF C+LAF+PTGWG+L ++
Sbjct: 69242 LSVTDIFACVLAFIPTGWGILSVS 69313
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,325,828,579
Number of Sequences: 1013581
Number of extensions: 17647874
Number of successful extensions: 128355
Number of sequences better than 1.0e-020: 94
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 43018600290
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)