TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2188214.2.1
         (880 letters)

Database: At_nucl_with_EST.fasta 
           1,013,581 sequences; 908,940,872 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AY070720.1|  Arabidopsis thaliana AT5g25560/T14C9_100 mRN...    88   8e-032
emb|BX831389.1|CNS0A1NP  Arabidopsis thaliana Full-length cD...    88   8e-032
ref|NM_122467.2|  Arabidopsis thaliana protein binding / ubi...    88   9e-032
gb|CF651317.1|CF651317  30-E021110-013-001-K07-T7R MPIZ-ADIS...    88   9e-032
gb|AV783078.1|AV783078  AV783078 RAFL5 Arabidopsis thaliana ...    88   9e-032
gb|AI996895.1|AI996895  701516501 A. thaliana, Columbia Col-...    87   1e-031
gb|AC006601.1|AC006601  Arabidopsis thaliana chromosome V ma...    70   2e-028
gb|CF651318.1|CF651318  30-E9213-013-001-K07-T7R MPIZ-ADIS-0...    88   2e-027
ref|NM_122198.2|  Arabidopsis thaliana ubiquitin-protein lig...    72   6e-026
gb|AY052362.1|  Arabidopsis thaliana AT5g22920/MRN17_15 mRNA...    72   6e-026
gb|AY088138.1|  Arabidopsis thaliana clone 41666 mRNA, compl...    72   6e-026
gb|BT002635.1|  Arabidopsis thaliana At5g22920/MRN17_15 gene...    72   6e-026
gb|DQ059131.1|  Arabidopsis thaliana RING finger family prot...    72   6e-026
dbj|AK220658.1|  Arabidopsis thaliana mRNA for PGPD14 protei...    72   6e-026
gb|C99815.1|C99815  C99815 YAC clone CIC8B11 region-specific...    72   2e-025
gb|AV537130.1|AV537130  AV537130 Arabidopsis thaliana liquid...    72   9e-023
gb|BP618227.1|BP618227  BP618227 RAFL16 Arabidopsis thaliana...    72   1e-022
gb|BP816757.1|BP816757  BP816757 RAFL19 Arabidopsis thaliana...    66   3e-021
>gb|AY070720.1| Arabidopsis thaliana AT5g25560/T14C9_100 mRNA sequence
          Length = 2903

 Score = 87.7 bits (185), Expect(2) = 8e-032
 Identities = 32/53 (60%), Positives = 37/53 (69%)
 Frame = -1 / +2

                                                                 
Query: 871  DXXNXVXXXPCXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
            +  N V   PC HTIH KCL+      Q+ACPLCSKSVCDMSK WE+ DME+A
Sbjct: 2285 ESRNDVTVLPCGHTIHQKCLEEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIA 2443

 Score = 72.1 bits (151), Expect(2) = 8e-032
 Identities = 24/49 (48%), Positives = 37/49 (75%)
 Frame = -1 / +2

                                                             
Query: 730  LDMELATLSDSCDHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
            +++    + +   ++MV+ILCNDCG  ++VQ+H++A KC NCKSYNTRQ
Sbjct: 2432 MEIAATPMPEPYQNRMVQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQ 2578
>emb|BX831389.1|CNS0A1NP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS85ZE03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2640

 Score = 87.7 bits (185), Expect(2) = 8e-032
 Identities = 32/53 (60%), Positives = 37/53 (69%)
 Frame = -1 / +3

                                                                 
Query: 871  DXXNXVXXXPCXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
            +  N V   PC HTIH KCL+      Q+ACPLCSKSVCDMSK WE+ DME+A
Sbjct: 2088 ESRNDVTVLPCGHTIHQKCLEEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIA 2246

 Score = 72.1 bits (151), Expect(2) = 8e-032
 Identities = 24/49 (48%), Positives = 37/49 (75%)
 Frame = -1 / +3

                                                             
Query: 730  LDMELATLSDSCDHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
            +++    + +   ++MV+ILCNDCG  ++VQ+H++A KC NCKSYNTRQ
Sbjct: 2235 MEIAATPMPEPYQNRMVQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQ 2381
>ref|NM_122467.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT5G25560 mRNA, complete cds
          Length = 1034

 Score = 87.7 bits (185), Expect(2) = 9e-032
 Identities = 32/53 (60%), Positives = 37/53 (69%)
 Frame = -1 / +3

                                                                
Query: 871 DXXNXVXXXPCXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
           +  N V   PC HTIH KCL+      Q+ACPLCSKSVCDMSK WE+ DME+A
Sbjct: 729 ESRNDVTVLPCGHTIHQKCLEEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIA 887

 Score = 72.1 bits (151), Expect(2) = 9e-032
 Identities = 24/49 (48%), Positives = 37/49 (75%)
 Frame = -1 / +3

                                                             
Query: 730  LDMELATLSDSCDHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
            +++    + +   ++MV+ILCNDCG  ++VQ+H++A KC NCKSYNTRQ
Sbjct: 876  MEIAATPMPEPYQNRMVQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQ 1022
>gb|CF651317.1|CF651317 30-E021110-013-001-K07-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
           clone MPIZp770K071Q 5-PRIME, mRNA sequence
          Length = 716

 Score = 87.7 bits (185), Expect(2) = 9e-032
 Identities = 32/53 (60%), Positives = 37/53 (69%)
 Frame = -1 / +3

                                                                
Query: 871 DXXNXVXXXPCXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
           +  N V   PC HTIH KCL+      Q+ACPLCSKSVCDMSK WE+ DME+A
Sbjct: 132 ESRNDVTVLPCGHTIHQKCLEEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIA 290

 Score = 72.1 bits (151), Expect(2) = 9e-032
 Identities = 24/49 (48%), Positives = 37/49 (75%)
 Frame = -1 / +3

                                                            
Query: 730 LDMELATLSDSCDHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
           +++    + +   ++MV+ILCNDCG  ++VQ+H++A KC NCKSYNTRQ
Sbjct: 279 MEIAATPMPEPYQNRMVQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQ 425
>gb|AV783078.1|AV783078 AV783078 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-05-C04 3',
           mRNA sequence
          Length = 706

 Score = 87.7 bits (185), Expect(2) = 9e-032
 Identities = 32/53 (60%), Positives = 37/53 (69%)
 Frame = -1 / -1

                                                                
Query: 871 DXXNXVXXXPCXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
           +  N V   PC HTIH KCL+      Q+ACPLCSKSVCDMSK WE+ DME+A
Sbjct: 619 ESRNDVTVLPCGHTIHQKCLEEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIA 461

 Score = 72.1 bits (151), Expect(2) = 9e-032
 Identities = 24/49 (48%), Positives = 37/49 (75%)
 Frame = -1 / -1

                                                            
Query: 730 LDMELATLSDSCDHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
           +++    + +   ++MV+ILCNDCG  ++VQ+H++A KC NCKSYNTRQ
Sbjct: 472 MEIAATPMPEPYQNRMVQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQ 326
>gb|AI996895.1|AI996895 701516501 A. thaliana, Columbia Col-0, root-2 Arabidopsis thaliana
           cDNA clone 701516501, mRNA sequence
          Length = 510

 Score = 87.2 bits (184), Expect(2) = 1e-031
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = -1 / -1

                                                             
Query: 862 NXVXXXPCXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
           N V   PC HTIH KCL+      Q+ACPLCSKSVCDMSK WE+ DME+A
Sbjct: 510 NDVTVLPCGHTIHQKCLEEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIA 361

 Score = 72.1 bits (151), Expect(2) = 1e-031
 Identities = 24/49 (48%), Positives = 37/49 (75%)
 Frame = -1 / -1

                                                            
Query: 730 LDMELATLSDSCDHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
           +++    + +   ++MV+ILCNDCG  ++VQ+H++A KC NCKSYNTRQ
Sbjct: 372 MEIAATPMPEPYQNRMVQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQ 226
>gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V map near 60.5 cM, complete sequence
          Length = 110684

 Score = 69.8 bits (146), Expect(3) = 2e-028
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = -1 / +1

                                                
Query: 688   KMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
             K V+ILCNDCG  ++VQ+H++A KC NCKSYNTRQ
Sbjct: 59065 KQVQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQ 59169

 Score = 63.4 bits (132), Expect(3) = 2e-028
 Identities = 21/27 (77%), Positives = 25/27 (92%)
 Frame = -1 / +2

                                        
Query: 793   CQFACPLCSKSVCDMSKAWERLDMELA 713
             C++ACPLCSKSVCDMSK WE+ DME+A
Sbjct: 58871 CRYACPLCSKSVCDMSKVWEKFDMEIA 58951

 Score = 32.7 bits (65), Expect(3) = 2e-028
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1 / +1

                                  
Query: 871   DXXNXVXXXPCXHTIHVKCLK 809
             +  N V   PC HTIH KCL+
Sbjct: 58705 ESRNDVTVLPCGHTIHQKCLE 58767
>gb|CF651318.1|CF651318 30-E9213-013-001-K07-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
           clone MPIZp770K071Q 5-PRIME, mRNA sequence
          Length = 477

 Score = 87.7 bits (185), Expect(2) = 2e-027
 Identities = 32/53 (60%), Positives = 37/53 (69%)
 Frame = -1 / +1

                                                                
Query: 871 DXXNXVXXXPCXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
           +  N V   PC HTIH KCL+      Q+ACPLCSKSVCDMSK WE+ DME+A
Sbjct: 130 ESRNDVTVLPCGHTIHQKCLEEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIA 288

 Score = 57.4 bits (119), Expect(2) = 2e-027
 Identities = 18/43 (41%), Positives = 31/43 (72%)
 Frame = -1 / +1

                                                      
Query: 730 LDMELATLSDSCDHKMVRILCNDCGAISDVQFHLIAHKCQNCK 602
           +++    + +   ++MV+ILCNDCG  ++VQ+H++A KC NCK
Sbjct: 277 MEIAATPMPEPYQNRMVQILCNDCGKKAEVQYHVVAQKCPNCK 405
>ref|NM_122198.2| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding
           AT5G22920 mRNA, complete cds
          Length = 1262

 Score = 72.1 bits (151), Expect(2) = 6e-026
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -1 / +3

                                                
Query: 694 DHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
           ++KMV ILCNDCG+ ++V+FHLIAHKC +C SYNTRQ
Sbjct: 849 ENKMVWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQ 959

 Score = 68.0 bits (142), Expect(2) = 6e-026
 Identities = 22/53 (41%), Positives = 33/53 (62%)
 Frame = -1 / +3

                                                                
Query: 871 DXXNXVXXXPCXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
           D    +    C HT+H++C K      ++ CP+CSKS+CDMS  W++LD E+A
Sbjct: 666 DSTRDITVLRCGHTMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVA 824
>gb|AY052362.1| Arabidopsis thaliana AT5g22920/MRN17_15 mRNA, complete cds
          Length = 1183

 Score = 72.1 bits (151), Expect(2) = 6e-026
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -1 / +2

                                                
Query: 694 DHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
           ++KMV ILCNDCG+ ++V+FHLIAHKC +C SYNTRQ
Sbjct: 848 ENKMVWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQ 958

 Score = 68.0 bits (142), Expect(2) = 6e-026
 Identities = 22/53 (41%), Positives = 33/53 (62%)
 Frame = -1 / +2

                                                                
Query: 871 DXXNXVXXXPCXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
           D    +    C HT+H++C K      ++ CP+CSKS+CDMS  W++LD E+A
Sbjct: 665 DSTRDITVLRCGHTMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVA 823
>gb|AY088138.1| Arabidopsis thaliana clone 41666 mRNA, complete sequence
          Length = 1145

 Score = 72.1 bits (151), Expect(2) = 6e-026
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -1 / +2

                                                
Query: 694 DHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
           ++KMV ILCNDCG+ ++V+FHLIAHKC +C SYNTRQ
Sbjct: 848 ENKMVWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQ 958

 Score = 68.0 bits (142), Expect(2) = 6e-026
 Identities = 22/53 (41%), Positives = 33/53 (62%)
 Frame = -1 / +2

                                                                
Query: 871 DXXNXVXXXPCXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
           D    +    C HT+H++C K      ++ CP+CSKS+CDMS  W++LD E+A
Sbjct: 665 DSTRDITVLRCGHTMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVA 823
>gb|BT002635.1| Arabidopsis thaliana At5g22920/MRN17_15 gene, complete cds
          Length = 876

 Score = 72.1 bits (151), Expect(2) = 6e-026
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -1 / +1

                                                
Query: 694 DHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
           ++KMV ILCNDCG+ ++V+FHLIAHKC +C SYNTRQ
Sbjct: 697 ENKMVWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQ 807

 Score = 68.0 bits (142), Expect(2) = 6e-026
 Identities = 22/53 (41%), Positives = 33/53 (62%)
 Frame = -1 / +1

                                                                
Query: 871 DXXNXVXXXPCXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
           D    +    C HT+H++C K      ++ CP+CSKS+CDMS  W++LD E+A
Sbjct: 514 DSTRDITVLRCGHTMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVA 672
>gb|DQ059131.1| Arabidopsis thaliana RING finger family protein (At5g22920) mRNA,
           complete cds
          Length = 876

 Score = 72.1 bits (151), Expect(2) = 6e-026
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -1 / +1

                                                
Query: 694 DHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
           ++KMV ILCNDCG+ ++V+FHLIAHKC +C SYNTRQ
Sbjct: 697 ENKMVWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQ 807

 Score = 68.0 bits (142), Expect(2) = 6e-026
 Identities = 22/53 (41%), Positives = 33/53 (62%)
 Frame = -1 / +1

                                                                
Query: 871 DXXNXVXXXPCXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
           D    +    C HT+H++C K      ++ CP+CSKS+CDMS  W++LD E+A
Sbjct: 514 DSTRDITVLRCGHTMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVA 672
>dbj|AK220658.1| Arabidopsis thaliana mRNA for PGPD14 protein, complete cds, clone:
           RAFL21-69-N21
          Length = 493

 Score = 72.1 bits (151), Expect(2) = 6e-026
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -1 / +1

                                                
Query: 694 DHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
           ++KMV ILCNDCG+ ++V+FHLIAHKC +C SYNTRQ
Sbjct: 187 ENKMVWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQ 297

 Score = 68.0 bits (142), Expect(2) = 6e-026
 Identities = 22/53 (41%), Positives = 33/53 (62%)
 Frame = -1 / +1

                                                                
Query: 871 DXXNXVXXXPCXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
           D    +    C HT+H++C K      ++ CP+CSKS+CDMS  W++LD E+A
Sbjct: 4   DSTRDITVLRCGHTMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVA 162
>gb|C99815.1|C99815 C99815 YAC clone CIC8B11 region-specific cDNA Arabidopsis thaliana
           cDNA clone 8B11-40, mRNA sequence
          Length = 480

 Score = 72.1 bits (151), Expect(2) = 2e-025
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -1 / +1

                                                
Query: 694 DHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
           ++KMV ILCNDCG+ ++V+FHLIAHKC +C SYNTRQ
Sbjct: 166 ENKMVWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQ 276

 Score = 66.1 bits (138), Expect(2) = 2e-025
 Identities = 21/43 (48%), Positives = 31/43 (72%)
 Frame = -1 / +1

                                                      
Query: 841 CXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
           C HT+H++C K      ++ CP+CSKS+CDMS  W++LD E+A
Sbjct: 13  CGHTMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVA 141
>gb|AV537130.1|AV537130 AV537130 Arabidopsis thaliana liquid-cultured seedlings Columbia
           Arabidopsis thaliana cDNA clone pAZNII0935R 5', mRNA
           sequence
          Length = 322

 Score = 72.1 bits (151), Expect(2) = 9e-023
 Identities = 24/49 (48%), Positives = 37/49 (75%)
 Frame = -1 / +2

                                                            
Query: 730 LDMELATLSDSCDHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
           +++    + +   ++MV+ILCNDCG  ++VQ+H++A KC NCKSYNTRQ
Sbjct: 62  MEIAATPMPEPYQNRMVQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQ 208

 Score = 57.4 bits (119), Expect(2) = 9e-023
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = -1 / +2

                                   
Query: 784 ACPLCSKSVCDMSKAWERLDMELA 713
           ACPLCSKSVCDMSK WE+ DME+A
Sbjct: 2   ACPLCSKSVCDMSKVWEKFDMEIA 73
>gb|BP618227.1|BP618227 BP618227 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-27-G13 3',
           mRNA sequence
          Length = 460

 Score = 72.1 bits (151), Expect(2) = 1e-022
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -1 / -3

                                                
Query: 694 DHKMVRILCNDCGAISDVQFHLIAHKCQNCKSYNTRQ 584
           ++KMV ILCNDCG+ ++V+FHLIAHKC +C SYNTRQ
Sbjct: 314 ENKMVWILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQ 204

 Score = 57.0 bits (118), Expect(2) = 1e-022
 Identities = 19/47 (40%), Positives = 31/47 (65%)
 Frame = -1 / -2

                                                          
Query: 832 TIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELATLSDSCD 692
           T+H++C K      ++ CP+CSKS+CDMS  W++LD E   + ++ D
Sbjct: 459 TMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEGCCIPNAKD 319
>gb|BP816757.1|BP816757 BP816757 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-42-P13 5',
           mRNA sequence
          Length = 406

 Score = 66.1 bits (138), Expect(3) = 3e-021
 Identities = 21/43 (48%), Positives = 31/43 (72%)
 Frame = -1 / +3

                                                      
Query: 841 CXHTIHVKCLKXXXXXCQFACPLCSKSVCDMSKAWERLDMELA 713
           C HT+H++C K      ++ CP+CSKS+CDMS  W++LD E+A
Sbjct: 54  CGHTMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVA 182

 Score = 46.4 bits (95), Expect(3) = 3e-021
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = -1 / +1

                                 
Query: 649 SDVQFHLIAHKCQNCKSYNTRQ 584
           ++V+FHLIAHKC +C SYNTRQ
Sbjct: 253 TNVRFHLIAHKCSSCGSYNTRQ 318

 Score = 29.5 bits (58), Expect(3) = 3e-021
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -1 / +3

                        
Query: 694 DHKMVRILCNDCG 656
           ++KMV ILCNDCG
Sbjct: 207 ENKMVWILCNDCG 245
  Database: At_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:09 PM
  Number of letters in database: 908,940,872
  Number of sequences in database:  1,013,581
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 1,748,644,107
Number of Sequences: 1013581
Number of extensions: 26237190
Number of successful extensions: 186973
Number of sequences better than 1.0e-020: 20
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 58107861944
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)