TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161272.2.19
(1410 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_105241.3| Arabidopsis thaliana ATEXPB2 (ARABIDOPSIS ... 76 7e-048
gb|BT004056.1| Arabidopsis thaliana clone RAFL15-26-E06 (R2... 68 6e-043
ref|NM_130074.2| Arabidopsis thaliana ATEXPB4 (ARABIDOPSIS ... 68 6e-043
emb|BX821210.1|CNS0A89M Arabidopsis thaliana Full-length cD... 68 6e-043
gb|AY084478.1| Arabidopsis thaliana clone 109135 mRNA, comp... 56 1e-036
ref|NM_127640.1| Arabidopsis thaliana ATEXPB1 (ARABIDOPSIS ... 56 1e-036
gb|BT003932.1| Arabidopsis thaliana clone RAFL15-12-F16 (R2... 56 1e-036
gb|U95967.1|ATU95967 Arabidopsis thaliana beta-expansin mRN... 56 1e-036
gb|BT005024.1| Arabidopsis thaliana clone U20717 putative b... 56 1e-036
emb|AX589887.1| Sequence 69 from Patent WO02081695 56 1e-036
emb|AX652050.1| Sequence 948 from Patent WO03000898 56 1e-036
emb|CQ805662.1| Sequence 2073 from Patent WO2004035798 56 1e-036
ref|NM_118965.2| Arabidopsis thaliana ATEXPB3 (ARABIDOPSIS ... 59 5e-035
gb|AY087228.1| Arabidopsis thaliana clone 33023 mRNA, compl... 59 5e-035
gb|AY039986.1| Arabidopsis thaliana putative beta-expansin/... 59 5e-035
gb|AY133801.1| Arabidopsis thaliana clone U10238 putative b... 59 5e-035
gb|CF652567.1|CF652567 63-L020523-066-003-M15-SP6P MPIZ-ADI... 59 1e-031
ref|NM_115921.1| Arabidopsis thaliana ATEXPB5 (ARABIDOPSIS ... 48 1e-031
emb|BX827016.1|CNS0A45X Arabidopsis thaliana Full-length cD... 53 5e-031
gb|AY619565.1| Arabidopsis thaliana beta-expansin 6 (EXPB6)... 52 4e-030
gb|AC007234.3|AC007234 Genomic sequence for Arabidopsis tha... 56 8e-030
gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis ... 52 2e-029
gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II s... 52 8e-027
ref|NM_117807.2| Arabidopsis thaliana ATEXLB1 (ARABIDOPSIS ... 84 1e-025
gb|BT005867.1| Arabidopsis thaliana At4g17030 gene, complet... 84 1e-025
emb|CQ805416.1| Sequence 1827 from Patent WO2004035798 84 1e-025
ref|NM_120002.2| Arabidopsis thaliana ATEXLA2 (ARABIDOPSIS ... 61 4e-023
gb|AF378855.1|AF378855 Arabidopsis thaliana AT4g38400/F22I1... 61 4e-023
gb|CK120898.1|CK120898 205h02.p1 AtM1 Arabidopsis thaliana ... 61 4e-023
gb|AY050470.1| Arabidopsis thaliana AT4g38400/F22I13_170 mR... 61 4e-023
emb|AX507256.1| Sequence 1951 from Patent WO0216655 61 4e-023
gb|CK121050.1|CK121050 204n16.p1 AtM1 Arabidopsis thaliana ... 61 4e-023
gb|CB252136.1|CB252136 34-E015332-019-005-D09-T7R MPIZ-ADIS... 61 1e-022
gb|BU635450.1|BU635450 023C04 Infected Arabidopsis Leaf Ara... 81 1e-022
dbj|AK117110.1| Arabidopsis thaliana At3g45960 mRNA for unk... 59 2e-022
ref|NM_114465.2| Arabidopsis thaliana ATEXLA3 (ARABIDOPSIS ... 59 2e-022
ref|NM_001035738.1| Arabidopsis thaliana ATEXLA3 (ARABIDOPS... 59 2e-022
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 52 5e-022
emb|AL138646.2|ATT8B10 Arabidopsis thaliana DNA chromosome ... 50 6e-022
>ref|NM_105241.3| Arabidopsis thaliana ATEXPB2 (ARABIDOPSIS THALIANA EXPANSIN B2)
AT1G65680 (ATEXPB2) mRNA, complete cds
Length = 822
Score = 76.2 bits (160), Expect(5) = 7e-048
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -3 / +1
Query: 1141 PPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITD 1004
PP+S M + G +FK GKGCG+CY+V+C K CS NPVTV ITD
Sbjct: 229 PPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVITD 366
Score = 51.9 bits (107), Expect(5) = 7e-048
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -3 / +1
Query: 640 ESGKKVIAKDVIPANWRPDAVYTSNVQF 557
ESGK V+A +VIPANW+P A+Y SNV F
Sbjct: 736 ESGKTVVASNVIPANWQPGAIYKSNVNF 819
Score = 48.7 bits (100), Expect(5) = 7e-048
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3 / +1
Query: 739 SAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 620
S +W M SWGA+W++D + L+ P S+R+TS K +
Sbjct: 634 SDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTV 753
Score = 47.3 bits (97), Expect(5) = 7e-048
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = -3 / +1
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG AFG++A G + ++R+ G + + +++V C Y
Sbjct: 397 HFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNY 510
Score = 44.1 bits (90), Expect(5) = 7e-048
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = -3 / +1
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAE 731
G+ + F ++KG N N AVLV YV DG+I +E++ L ++
Sbjct: 514 GKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSD 639
>gb|BT004056.1| Arabidopsis thaliana clone RAFL15-26-E06 (R20474) putative
beta-expansin (At2g45110) mRNA, complete cds
Length = 977
Score = 68.0 bits (142), Expect(5) = 6e-043
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = -3 / +3
Query: 1141 PPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITD 1004
PP M + G +F +GKGCG+CY+V C P CSG+P+TV ITD
Sbjct: 261 PPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTITD 398
Score = 57.9 bits (120), Expect(5) = 6e-043
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = -3 / +3
Query: 982 PYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
P H DLSGKA G+LAKPG D++R G++ V ++R C Y
Sbjct: 429 PVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLY 548
Score = 41.8 bits (85), Expect(5) = 6e-043
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3 / +3
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
+ ES K ++A +VIPANW+PD Y S V F
Sbjct: 762 SGESHKVIVAYNVIPANWKPDESYRSIVNF 851
Score = 41.8 bits (85), Expect(5) = 6e-043
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = -3 / +3
Query: 703 AIWRMDTAKALKGPFSIRLTSESGKKVI 620
A+W++++ AL+GPF+IRLTS KVI
Sbjct: 702 AVWKVNSGSALRGPFNIRLTSGESHKVI 785
Score = 41.8 bits (85), Expect(5) = 6e-043
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -3 / +3
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQ 749
G IVF ++ G NP Y++ +V+Y DGD+ +EIQ
Sbjct: 552 GTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQ 659
>ref|NM_130074.2| Arabidopsis thaliana ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4)
AT2G45110 (ATEXPB4) mRNA, complete cds
Length = 956
Score = 68.0 bits (142), Expect(5) = 6e-043
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = -3 / +3
Query: 1141 PPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITD 1004
PP M + G +F +GKGCG+CY+V C P CSG+P+TV ITD
Sbjct: 261 PPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTITD 398
Score = 57.9 bits (120), Expect(5) = 6e-043
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = -3 / +3
Query: 982 PYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
P H DLSGKA G+LAKPG D++R G++ V ++R C Y
Sbjct: 429 PVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLY 548
Score = 41.8 bits (85), Expect(5) = 6e-043
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3 / +3
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
+ ES K ++A +VIPANW+PD Y S V F
Sbjct: 762 SGESHKVIVAYNVIPANWKPDESYRSIVNF 851
Score = 41.8 bits (85), Expect(5) = 6e-043
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = -3 / +3
Query: 703 AIWRMDTAKALKGPFSIRLTSESGKKVI 620
A+W++++ AL+GPF+IRLTS KVI
Sbjct: 702 AVWKVNSGSALRGPFNIRLTSGESHKVI 785
Score = 41.8 bits (85), Expect(5) = 6e-043
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -3 / +3
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQ 749
G IVF ++ G NP Y++ +V+Y DGD+ +EIQ
Sbjct: 552 GTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQ 659
>emb|BX821210.1|CNS0A89M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL25ZE08 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 923
Score = 68.0 bits (142), Expect(5) = 6e-043
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = -3 / +2
Query: 1141 PPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITD 1004
PP M + G +F +GKGCG+CY+V C P CSG+P+TV ITD
Sbjct: 230 PPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTITD 367
Score = 57.9 bits (120), Expect(5) = 6e-043
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = -3 / +2
Query: 982 PYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
P H DLSGKA G+LAKPG D++R G++ V ++R C Y
Sbjct: 398 PVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLY 517
Score = 41.8 bits (85), Expect(5) = 6e-043
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3 / +2
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
+ ES K ++A +VIPANW+PD Y S V F
Sbjct: 731 SGESHKVIVAYNVIPANWKPDESYRSIVNF 820
Score = 41.8 bits (85), Expect(5) = 6e-043
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = -3 / +2
Query: 703 AIWRMDTAKALKGPFSIRLTSESGKKVI 620
A+W++++ AL+GPF+IRLTS KVI
Sbjct: 671 AVWKVNSGSALRGPFNIRLTSGESHKVI 754
Score = 41.8 bits (85), Expect(5) = 6e-043
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -3 / +2
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQ 749
G IVF ++ G NP Y++ +V+Y DGD+ +EIQ
Sbjct: 521 GTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQ 628
>gb|AY084478.1| Arabidopsis thaliana clone 109135 mRNA, complete sequence
Length = 1137
Score = 56.1 bits (116), Expect(5) = 1e-036
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = -3 / +2
Query: 1150 VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
V++ P+ + +FK G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 263 VDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQS 415
Score = 55.6 bits (115), Expect(5) = 1e-036
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3 / +2
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG AFG +A PG N IR+ G++++ +RR CKY
Sbjct: 449 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 562
Score = 55.1 bits (114), Expect(5) = 1e-036
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -3 / +2
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 695
G+ I FH+ G +L++L++Y +GDI M I+ S EW MK WGA W
Sbjct: 566 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 727
Score = 39.1 bits (79), Expect(5) = 1e-036
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +2
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
T + K + A DVIP+NW P A YTS + F
Sbjct: 776 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 865
Score = 24.0 bits (46), Expect(5) = 1e-036
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3 / +2
Query: 1237 KWLTARATWY 1208
+WL A ATWY
Sbjct: 179 RWLPATATWY 208
>ref|NM_127640.1| Arabidopsis thaliana ATEXPB1 (ARABIDOPSIS THALIANA EXPANSIN B1)
AT2G20750 (ATEXPB1) mRNA, complete cds
Length = 1137
Score = 56.1 bits (116), Expect(5) = 1e-036
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = -3 / +2
Query: 1150 VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
V++ P+ + +FK G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 263 VDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQS 415
Score = 55.6 bits (115), Expect(5) = 1e-036
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3 / +2
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG AFG +A PG N IR+ G++++ +RR CKY
Sbjct: 449 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 562
Score = 55.1 bits (114), Expect(5) = 1e-036
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -3 / +2
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 695
G+ I FH+ G +L++L++Y +GDI M I+ S EW MK WGA W
Sbjct: 566 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 727
Score = 39.1 bits (79), Expect(5) = 1e-036
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +2
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
T + K + A DVIP+NW P A YTS + F
Sbjct: 776 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 865
Score = 24.0 bits (46), Expect(5) = 1e-036
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3 / +2
Query: 1237 KWLTARATWY 1208
+WL A ATWY
Sbjct: 179 RWLPATATWY 208
>gb|BT003932.1| Arabidopsis thaliana clone RAFL15-12-F16 (R20717) putative
beta-expansin pollen allergen protein (At2g20750) mRNA,
complete cds
Length = 1124
Score = 56.1 bits (116), Expect(5) = 1e-036
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = -3 / +3
Query: 1150 VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
V++ P+ + +FK G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 261 VDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQS 413
Score = 55.6 bits (115), Expect(5) = 1e-036
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3 / +3
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG AFG +A PG N IR+ G++++ +RR CKY
Sbjct: 447 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 560
Score = 55.1 bits (114), Expect(5) = 1e-036
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -3 / +3
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 695
G+ I FH+ G +L++L++Y +GDI M I+ S EW MK WGA W
Sbjct: 564 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 725
Score = 39.1 bits (79), Expect(5) = 1e-036
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +3
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
T + K + A DVIP+NW P A YTS + F
Sbjct: 774 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 863
Score = 24.0 bits (46), Expect(5) = 1e-036
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3 / +3
Query: 1237 KWLTARATWY 1208
+WL A ATWY
Sbjct: 177 RWLPATATWY 206
>gb|U95967.1|ATU95967 Arabidopsis thaliana beta-expansin mRNA, partial cds
Length = 1037
Score = 56.1 bits (116), Expect(5) = 1e-036
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = -3 / +3
Query: 1150 VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
V++ P+ + +FK G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 165 VDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQS 317
Score = 55.6 bits (115), Expect(5) = 1e-036
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3 / +3
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG AFG +A PG N IR+ G++++ +RR CKY
Sbjct: 351 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 464
Score = 55.1 bits (114), Expect(5) = 1e-036
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -3 / +3
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 695
G+ I FH+ G +L++L++Y +GDI M I+ S EW MK WGA W
Sbjct: 468 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 629
Score = 39.1 bits (79), Expect(5) = 1e-036
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +3
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
T + K + A DVIP+NW P A YTS + F
Sbjct: 678 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 767
Score = 24.0 bits (46), Expect(5) = 1e-036
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3 / +3
Query: 1237 KWLTARATWY 1208
+WL A ATWY
Sbjct: 81 RWLPATATWY 110
>gb|BT005024.1| Arabidopsis thaliana clone U20717 putative beta-expansin pollen
allergen protein (At2g20750) mRNA, complete cds
Length = 847
Score = 56.1 bits (116), Expect(5) = 1e-036
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = -3 / +1
Query: 1150 VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
V++ P+ + +FK G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 199 VDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQS 351
Score = 55.6 bits (115), Expect(5) = 1e-036
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3 / +1
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG AFG +A PG N IR+ G++++ +RR CKY
Sbjct: 385 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 498
Score = 55.1 bits (114), Expect(5) = 1e-036
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -3 / +1
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 695
G+ I FH+ G +L++L++Y +GDI M I+ S EW MK WGA W
Sbjct: 502 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 663
Score = 39.1 bits (79), Expect(5) = 1e-036
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +1
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
T + K + A DVIP+NW P A YTS + F
Sbjct: 712 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 801
Score = 24.0 bits (46), Expect(5) = 1e-036
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3 / +1
Query: 1237 KWLTARATWY 1208
+WL A ATWY
Sbjct: 115 RWLPATATWY 144
>emb|AX589887.1| Sequence 69 from Patent WO02081695
Length = 816
Score = 56.1 bits (116), Expect(5) = 1e-036
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = -3 / +1
Query: 1150 VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
V++ P+ + +FK G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 199 VDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQS 351
Score = 55.6 bits (115), Expect(5) = 1e-036
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3 / +1
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG AFG +A PG N IR+ G++++ +RR CKY
Sbjct: 385 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 498
Score = 55.1 bits (114), Expect(5) = 1e-036
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -3 / +1
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 695
G+ I FH+ G +L++L++Y +GDI M I+ S EW MK WGA W
Sbjct: 502 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 663
Score = 39.1 bits (79), Expect(5) = 1e-036
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +1
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
T + K + A DVIP+NW P A YTS + F
Sbjct: 712 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 801
Score = 24.0 bits (46), Expect(5) = 1e-036
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3 / +1
Query: 1237 KWLTARATWY 1208
+WL A ATWY
Sbjct: 115 RWLPATATWY 144
>emb|AX652050.1| Sequence 948 from Patent WO03000898
Length = 816
Score = 56.1 bits (116), Expect(5) = 1e-036
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = -3 / +1
Query: 1150 VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
V++ P+ + +FK G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 199 VDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQS 351
Score = 55.6 bits (115), Expect(5) = 1e-036
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3 / +1
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG AFG +A PG N IR+ G++++ +RR CKY
Sbjct: 385 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 498
Score = 55.1 bits (114), Expect(5) = 1e-036
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -3 / +1
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 695
G+ I FH+ G +L++L++Y +GDI M I+ S EW MK WGA W
Sbjct: 502 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 663
Score = 39.1 bits (79), Expect(5) = 1e-036
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +1
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
T + K + A DVIP+NW P A YTS + F
Sbjct: 712 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 801
Score = 24.0 bits (46), Expect(5) = 1e-036
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3 / +1
Query: 1237 KWLTARATWY 1208
+WL A ATWY
Sbjct: 115 RWLPATATWY 144
>emb|CQ805662.1| Sequence 2073 from Patent WO2004035798
Length = 816
Score = 56.1 bits (116), Expect(5) = 1e-036
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = -3 / +1
Query: 1150 VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
V++ P+ + +FK G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 199 VDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQS 351
Score = 55.6 bits (115), Expect(5) = 1e-036
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3 / +1
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG AFG +A PG N IR+ G++++ +RR CKY
Sbjct: 385 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 498
Score = 55.1 bits (114), Expect(5) = 1e-036
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -3 / +1
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 695
G+ I FH+ G +L++L++Y +GDI M I+ S EW MK WGA W
Sbjct: 502 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 663
Score = 39.1 bits (79), Expect(5) = 1e-036
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3 / +1
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
T + K + A DVIP+NW P A YTS + F
Sbjct: 712 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 801
Score = 24.0 bits (46), Expect(5) = 1e-036
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3 / +1
Query: 1237 KWLTARATWY 1208
+WL A ATWY
Sbjct: 115 RWLPATATWY 144
>ref|NM_118965.2| Arabidopsis thaliana ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3)
AT4G28250 (ATEXPB3) mRNA, complete cds
Length = 1299
Score = 59.3 bits (123), Expect(5) = 5e-035
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = -3 / +1
Query: 1150 VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITD 1004
V++ P N +FK+G+GCG+CY+VRC +K CS VTV ITD
Sbjct: 283 VDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITD 429
Score = 53.3 bits (110), Expect(5) = 5e-035
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = -3 / +1
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 695
G+ I FH+ +G +L++LV++ +GDI M I+ + EW MK WGA W
Sbjct: 577 GKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW 738
Score = 47.3 bits (97), Expect(5) = 5e-035
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -3 / +1
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG FG LA G + +R+ G++ V +RR CKY
Sbjct: 460 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKY 573
Score = 39.6 bits (80), Expect(5) = 5e-035
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3 / +1
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
T +GK + A DV+P NW P A Y+S + F
Sbjct: 787 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 876
Score = 24.4 bits (47), Expect(5) = 5e-035
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3 / +1
Query: 1243 NGKWLTARATWY 1208
N WL A ATWY
Sbjct: 193 NSHWLPAVATWY 228
>gb|AY087228.1| Arabidopsis thaliana clone 33023 mRNA, complete sequence
Length = 1257
Score = 59.3 bits (123), Expect(5) = 5e-035
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = -3 / +3
Query: 1150 VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITD 1004
V++ P N +FK+G+GCG+CY+VRC +K CS VTV ITD
Sbjct: 288 VDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITD 434
Score = 53.3 bits (110), Expect(5) = 5e-035
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = -3 / +3
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 695
G+ I FH+ +G +L++LV++ +GDI M I+ + EW MK WGA W
Sbjct: 582 GKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW 743
Score = 47.3 bits (97), Expect(5) = 5e-035
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -3 / +3
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG FG LA G + +R+ G++ V +RR CKY
Sbjct: 465 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKY 578
Score = 39.6 bits (80), Expect(5) = 5e-035
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3 / +3
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
T +GK + A DV+P NW P A Y+S + F
Sbjct: 792 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 881
Score = 24.4 bits (47), Expect(5) = 5e-035
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3 / +3
Query: 1243 NGKWLTARATWY 1208
N WL A ATWY
Sbjct: 198 NSHWLPAVATWY 233
>gb|AY039986.1| Arabidopsis thaliana putative beta-expansin/allergen protein
(At4g28250) mRNA, complete cds
Length = 1216
Score = 59.3 bits (123), Expect(5) = 5e-035
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = -3 / +1
Query: 1150 VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITD 1004
V++ P N +FK+G+GCG+CY+VRC +K CS VTV ITD
Sbjct: 283 VDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITD 429
Score = 53.3 bits (110), Expect(5) = 5e-035
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = -3 / +1
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 695
G+ I FH+ +G +L++LV++ +GDI M I+ + EW MK WGA W
Sbjct: 577 GKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW 738
Score = 47.3 bits (97), Expect(5) = 5e-035
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -3 / +1
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG FG LA G + +R+ G++ V +RR CKY
Sbjct: 460 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKY 573
Score = 39.6 bits (80), Expect(5) = 5e-035
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3 / +1
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
T +GK + A DV+P NW P A Y+S + F
Sbjct: 787 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 876
Score = 24.4 bits (47), Expect(5) = 5e-035
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3 / +1
Query: 1243 NGKWLTARATWY 1208
N WL A ATWY
Sbjct: 193 NSHWLPAVATWY 228
>gb|AY133801.1| Arabidopsis thaliana clone U10238 putative beta-expansin/allergen
protein (At4g28250) mRNA, complete cds
Length = 826
Score = 59.3 bits (123), Expect(5) = 5e-035
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = -3 / +1
Query: 1150 VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITD 1004
V++ P N +FK+G+GCG+CY+VRC +K CS VTV ITD
Sbjct: 187 VDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITD 333
Score = 53.3 bits (110), Expect(5) = 5e-035
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = -3 / +1
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 695
G+ I FH+ +G +L++LV++ +GDI M I+ + EW MK WGA W
Sbjct: 481 GKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW 642
Score = 47.3 bits (97), Expect(5) = 5e-035
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -3 / +1
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG FG LA G + +R+ G++ V +RR CKY
Sbjct: 364 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKY 477
Score = 39.6 bits (80), Expect(5) = 5e-035
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3 / +1
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
T +GK + A DV+P NW P A Y+S + F
Sbjct: 691 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 780
Score = 24.4 bits (47), Expect(5) = 5e-035
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3 / +1
Query: 1243 NGKWLTARATWY 1208
N WL A ATWY
Sbjct: 97 NSHWLPAVATWY 132
>gb|CF652567.1|CF652567 63-L020523-066-003-M15-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001M153Q 5-PRIME, mRNA sequence
Length = 816
Score = 59.3 bits (123), Expect(5) = 1e-031
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = -3 / +2
Query: 1150 VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITD 1004
V++ P N +FK+G+GCG+CY+VRC +K CS VTV ITD
Sbjct: 272 VDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITD 418
Score = 53.3 bits (110), Expect(5) = 1e-031
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = -3 / +2
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 695
G+ I FH+ +G +L++LV++ +GDI M I+ + EW MK WGA W
Sbjct: 566 GKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW 727
Score = 47.3 bits (97), Expect(5) = 1e-031
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -3 / +2
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG FG LA G + +R+ G++ V +RR CKY
Sbjct: 449 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKY 562
Score = 28.1 bits (55), Expect(5) = 1e-031
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 673 LKGPFSIRLTSESGKKVIA 617
LKGPFSI+LT+ S K ++
Sbjct: 746 LKGPFSIKLTTLSAGKTLS 802
Score = 24.4 bits (47), Expect(5) = 1e-031
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3 / +2
Query: 1243 NGKWLTARATWY 1208
N WL A ATWY
Sbjct: 182 NSHWLPAVATWY 217
>ref|NM_115921.1| Arabidopsis thaliana ATEXPB5 (ARABIDOPSIS THALIANA EXPANSIN B5)
AT3G60570 (ATEXPB5) mRNA, complete cds
Length = 759
Score = 48.3 bits (99), Expect(5) = 1e-031
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -3 / +1
Query: 1138 PYSGMTACGNVPIFKDGKGCGSCYEVRC 1055
PY M + G +FKDGKGCG+CY ++C
Sbjct: 193 PYRCMVSAGGPSLFKDGKGCGACYRLKC 276
Score = 44.6 bits (91), Expect(5) = 1e-031
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -3 / +1
Query: 637 SGKKVIAKDVIPANWRPDAVYTSNVQF 557
SGKK+IAK VIP W P A+Y S V F
Sbjct: 655 SGKKIIAKGVIPEKWSPGAIYHSKVNF 735
Score = 44.6 bits (91), Expect(5) = 1e-031
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -3 / +1
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCG 902
HFDLSGKAFG+LAK G D++R+ G
Sbjct: 355 HFDLSGKAFGALAKRGKGDQLRNLG 429
Score = 37.7 bits (76), Expect(5) = 1e-031
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3 / +1
Query: 847 IVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQ 749
I H++ G NP Y++ VK+ DG+ +E+Q
Sbjct: 445 IAIHVDAGANPYYMSFAVKFANGDGNFACIEVQ 543
Score = 37.3 bits (75), Expect(5) = 1e-031
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3 / +1
Query: 733 EWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 620
++ M+ A+WR+ LKGPF+IRLTS K I
Sbjct: 556 QYMKMEEMRSAVWRLSPGVPLKGPFNIRLTSAVSGKKI 669
>emb|BX827016.1|CNS0A45X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB87ZG06 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1257
Score = 53.3 bits (110), Expect(6) = 5e-031
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = -3 / +2
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 695
G+ I FH+ +G +L++LV++ +GDI M I+ + EW MK WGA W
Sbjct: 566 GKNIAFHVNEGSTDFWLSMLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW 727
Score = 47.3 bits (97), Expect(6) = 5e-031
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -3 / +2
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
HFDLSG FG LA G + +R+ G++ V +RR CKY
Sbjct: 449 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKY 562
Score = 39.6 bits (80), Expect(6) = 5e-031
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3 / +2
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
T +GK + A DV+P NW P A Y+S + F
Sbjct: 776 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 865
Score = 36.8 bits (74), Expect(6) = 5e-031
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -3 / +2
Query: 1075 SCYEVRCKEKPECSGNPVTVYITD 1004
+CY+VRC +K CS VTV ITD
Sbjct: 347 TCYKVRCLDKSICSRRAVTVIITD 418
Score = 25.4 bits (49), Expect(6) = 5e-031
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3 / +3
Query: 1150 VNLPPYSGMTACGNVPIFKDGKGCG 1076
V++ P N +FK+G+GCG
Sbjct: 273 VDVKPLHARVGAVNPILFKNGEGCG 347
Score = 24.4 bits (47), Expect(6) = 5e-031
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3 / +2
Query: 1243 NGKWLTARATWY 1208
N WL A ATWY
Sbjct: 182 NSHWLPAVATWY 217
>gb|AY619565.1| Arabidopsis thaliana beta-expansin 6 (EXPB6) gene, complete cds
Length = 2504
Score = 51.9 bits (107), Expect(6) = 4e-030
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = -3 / +2
Query: 982 PYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
P HFDLSGKA G+LA+PG D++R G++ V + R Y
Sbjct: 1865 PAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYIRYLYTY 1984
Score = 39.1 bits (79), Expect(6) = 4e-030
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -3 / +1
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
++ES V+A +VIPANW+P+ Y S V F
Sbjct: 2407 SAESHNVVVAYNVIPANWKPNETYRSVVNF 2496
Score = 39.1 bits (79), Expect(6) = 4e-030
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3 / +2
Query: 1141 PPYSGMTACGNVPIFKDGKGCGSCYEV 1061
PP GM + G +F +G GCG+C++V
Sbjct: 1319 PPLYGMVSAGGPSVFNNGIGCGTCFQV 1399
Score = 38.6 bits (78), Expect(6) = 4e-030
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3 / +1
Query: 724 PMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 620
PM+ A+W++++ L GPF+IRLTS V+
Sbjct: 2326 PMQEMRSAVWKVNSGSPLTGPFNIRLTSAESHNVV 2430
Score = 38.6 bits (78), Expect(6) = 4e-030
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3 / +1
Query: 847 IVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQ 749
I F ++ G NP Y++ +V+Y DGD+ EIQ
Sbjct: 2206 IAFRMDPGANPYYISFVVEYENGDGDLAYTEIQ 2304
Score = 32.7 bits (65), Expect(6) = 4e-030
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3 / +2
Query: 1069 YEVRCKEKPECSGNPVTVYITD 1004
Y++ C P CS P+TV ITD
Sbjct: 1769 YQILCNGHPACSRRPITVTITD 1834
>gb|AC007234.3|AC007234 Genomic sequence for Arabidopsis thaliana BAC F1E22, complete sequence
Length = 92356
Score = 55.6 bits (115), Expect(6) = 2e-025
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = -3 / +2
Query: 982 PYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKY 863
P HFDLSGKA G+LA+PG D++R G++ V +RR Y
Sbjct: 27551 PAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYRRYLYTY 27670
Score = 51.9 bits (107), Expect(6) = 8e-030
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -3 / +3
Query: 640 ESGKKVIAKDVIPANWRPDAVYTSNVQF 557
ESGK V+A +VIPANW+P A+Y SNV F
Sbjct: 25830 ESGKTVVASNVIPANWQPGAIYKSNVNF 25913
Score = 48.7 bits (100), Expect(6) = 8e-030
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3 / +3
Query: 739 SAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 620
S +W M SWGA+W++D + L+ P S+R+TS K +
Sbjct: 25728 SDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTV 25847
Score = 46.9 bits (96), Expect(6) = 8e-030
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -3 / +3
Query: 1141 PPYSGMTACGNVPIFKDGKGCGSCYEV 1061
PP+S M + G +FK GKGCG+CY+V
Sbjct: 25122 PPFSKMVSAGGPSLFKSGKGCGACYQV 25202
Score = 44.1 bits (90), Expect(6) = 8e-030
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = -3 / +3
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAE 731
G+ + F ++KG N N AVLV YV DG+I +E++ L ++
Sbjct: 25608 GKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSD 25733
Score = 41.8 bits (85), Expect(6) = 2e-025
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -3 / +3
Query: 733 EWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 620
E+ PM+ A+W++ + L GPF+IRLTS KV+
Sbjct: 28002 EFIPMQEMRSAVWKISSGSPLTGPFNIRLTSAESHKVV 28115
Score = 40.9 bits (83), Expect(6) = 2e-025
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = -3 / +3
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
++ES K V+A +VIPANW+P+ Y S V F
Sbjct: 28092 SAESHKVVLAYNVIPANWKPNETYRSVVNF 28181
Score = 39.6 bits (80), Expect(6) = 2e-025
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -3 / +3
Query: 847 IVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQ 749
I F ++ G NP Y++ +V+Y DGD+ +EIQ
Sbjct: 27891 IAFRMDPGANPYYISFVVEYENGDGDLAYIEIQ 27989
Score = 39.1 bits (79), Expect(6) = 2e-025
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 1141 PPYSGMTACGNVPIFKDGKGCGSCYEV 1061
PP GM + G +F +G GCG+C++V
Sbjct: 27007 PPLYGMVSAGGPSVFNNGIGCGTCFQV 27087
Score = 38.2 bits (77), Expect(6) = 8e-030
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = -3 / +3
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRR 878
HFDLSG AFG++A G + ++R+ G + + +++
Sbjct: 25374 HFDLSGTAFGAMAISGQDSQLRNVGELQILYKK 25472
Score = 35.0 bits (70), Expect(6) = 8e-030
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -3 / +3
Query: 1066 EVRCKEKPECSGNPVTVYITD 1004
+V+C K CS NPVTV ITD
Sbjct: 25281 QVKCTSKSACSKNPVTVVITD 25343
Score = 32.7 bits (65), Expect(6) = 2e-025
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3 / +2
Query: 1069 YEVRCKEKPECSGNPVTVYITD 1004
Y++ C P CS P+TV ITD
Sbjct: 27455 YQILCNGHPACSRRPITVTITD 27520
>gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 109560
Score = 51.9 bits (107), Expect(6) = 2e-029
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -3 / +1
Query: 640 ESGKKVIAKDVIPANWRPDAVYTSNVQF 557
ESGK V+A +VIPANW+P A+Y SNV F
Sbjct: 107383 ESGKTVVASNVIPANWQPGAIYKSNVNF 107466
Score = 48.7 bits (100), Expect(6) = 2e-029
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3 / +1
Query: 739 SAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 620
S +W M SWGA+W++D + L+ P S+R+TS K +
Sbjct: 107281 SDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTV 107400
Score = 46.9 bits (96), Expect(6) = 2e-029
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -3 / +1
Query: 1141 PPYSGMTACGNVPIFKDGKGCGSCYEV 1061
PP+S M + G +FK GKGCG+CY+V
Sbjct: 106675 PPFSKMVSAGGPSLFKSGKGCGACYQV 106755
Score = 44.1 bits (90), Expect(6) = 2e-029
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = -3 / +1
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAE 731
G+ + F ++KG N N AVLV YV DG+I +E++ L ++
Sbjct: 107161 GKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSD 107286
Score = 38.2 bits (77), Expect(6) = 2e-029
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = -3 / +1
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRR 878
HFDLSG AFG++A G + ++R+ G + + +++
Sbjct: 106927 HFDLSGTAFGAMAISGQDSQLRNVGELQILYKK 107025
Score = 35.0 bits (70), Expect(6) = 2e-029
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -3 / +1
Query: 1066 EVRCKEKPECSGNPVTVYITD 1004
+V+C K CS NPVTV ITD
Sbjct: 106834 QVKCTSKSACSKNPVTVVITD 106896
>gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II section 241 of 255 of the complete
sequence. Sequence from clones T13E15, T14P1
Length = 87885
Score = 51.9 bits (107), Expect(6) = 8e-027
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -3 / +3
Query: 982 PYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRR 878
P H DLSGKA G+LAKPG D++R G++ V ++R
Sbjct: 66078 PVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKR 66182
Score = 43.7 bits (89), Expect(6) = 8e-027
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3 / +2
Query: 1141 PPYSGMTACGNVPIFKDGKGCGSCYEVR 1058
PP M + G +F +GKGCG+CY+VR
Sbjct: 65507 PPLYAMVSAGGPSLFNNGKGCGTCYQVR 65590
Score = 41.8 bits (85), Expect(6) = 8e-027
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3 / +2
Query: 646 TSESGKKVIAKDVIPANWRPDAVYTSNVQF 557
+ ES K ++A +VIPANW+PD Y S V F
Sbjct: 66773 SGESHKVIVAYNVIPANWKPDESYRSIVNF 66862
Score = 41.8 bits (85), Expect(6) = 8e-027
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = -3 / +2
Query: 703 AIWRMDTAKALKGPFSIRLTSESGKKVI 620
A+W++++ AL+GPF+IRLTS KVI
Sbjct: 66713 AVWKVNSGSALRGPFNIRLTSGESHKVI 66796
Score = 41.8 bits (85), Expect(6) = 8e-027
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -3 / +2
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQ 749
G IVF ++ G NP Y++ +V+Y DGD+ +EIQ
Sbjct: 66563 GTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQ 66670
Score = 32.7 bits (65), Expect(6) = 8e-027
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3 / +3
Query: 1069 YEVRCKEKPECSGNPVTVYITD 1004
Y V C P CSG+P+TV ITD
Sbjct: 65982 Y*VVCIGHPACSGSPITVTITD 66047
>ref|NM_117807.2| Arabidopsis thaliana ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE
B1) AT4G17030 (ATEXLB1) mRNA, complete cds
Length = 1093
Score = 84.5 bits (178), Expect(3) = 1e-025
Identities = 34/92 (36%), Positives = 58/92 (63%)
Frame = -3 / +2
Query: 973 FDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLV 794
F LS KA+G +A+PG +++ G+++VE++R+ C+Y + EK NP+YLA+LV
Sbjct: 437 FILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILV 616
Query: 793 KYVADDGDIVLMEIQDKLSAEWKPMKLSWGAI 698
YV DI+ +E+ + EW+ M+ +GA+
Sbjct: 617 LYVGGVNDILAVEVWQEDCKEWRRMRRVFGAV 712
Score = 48.3 bits (99), Expect(3) = 1e-025
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -3 / +2
Query: 1102 IFKDGKGCGSCYEVRCKEKPECSGNPVTVYITD 1004
++ +G GCG+CY+VRCK P CS V V TD
Sbjct: 314 LWNNGTGCGACYQVRCKIPPHCSEEGVYVVATD 412
Score = 24.9 bits (48), Expect(3) = 1e-025
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3 / +2
Query: 613 DVIPANWRPDAVYTSNV 563
+ IPA+W A Y SN+
Sbjct: 800 NAIPADWTAGATYDSNI 850
>gb|BT005867.1| Arabidopsis thaliana At4g17030 gene, complete cds
Length = 753
Score = 84.5 bits (178), Expect(3) = 1e-025
Identities = 34/92 (36%), Positives = 58/92 (63%)
Frame = -3 / +1
Query: 973 FDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLV 794
F LS KA+G +A+PG +++ G+++VE++R+ C+Y + EK NP+YLA+LV
Sbjct: 328 FILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILV 507
Query: 793 KYVADDGDIVLMEIQDKLSAEWKPMKLSWGAI 698
YV DI+ +E+ + EW+ M+ +GA+
Sbjct: 508 LYVGGVNDILAVEVWQEDCKEWRRMRRVFGAV 603
Score = 48.3 bits (99), Expect(3) = 1e-025
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -3 / +1
Query: 1102 IFKDGKGCGSCYEVRCKEKPECSGNPVTVYITD 1004
++ +G GCG+CY+VRCK P CS V V TD
Sbjct: 205 LWNNGTGCGACYQVRCKIPPHCSEEGVYVVATD 303
Score = 24.9 bits (48), Expect(3) = 1e-025
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3 / +1
Query: 613 DVIPANWRPDAVYTSNV 563
+ IPA+W A Y SN+
Sbjct: 691 NAIPADWTAGATYDSNI 741
>emb|CQ805416.1| Sequence 1827 from Patent WO2004035798
Length = 753
Score = 84.5 bits (178), Expect(3) = 1e-025
Identities = 34/92 (36%), Positives = 58/92 (63%)
Frame = -3 / +1
Query: 973 FDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLV 794
F LS KA+G +A+PG +++ G+++VE++R+ C+Y + EK NP+YLA+LV
Sbjct: 328 FILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILV 507
Query: 793 KYVADDGDIVLMEIQDKLSAEWKPMKLSWGAI 698
YV DI+ +E+ + EW+ M+ +GA+
Sbjct: 508 LYVGGVNDILAVEVWQEDCKEWRRMRRVFGAV 603
Score = 48.3 bits (99), Expect(3) = 1e-025
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -3 / +1
Query: 1102 IFKDGKGCGSCYEVRCKEKPECSGNPVTVYITD 1004
++ +G GCG+CY+VRCK P CS V V TD
Sbjct: 205 LWNNGTGCGACYQVRCKIPPHCSEEGVYVVATD 303
Score = 24.9 bits (48), Expect(3) = 1e-025
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3 / +1
Query: 613 DVIPANWRPDAVYTSNV 563
+ IPA+W A Y SN+
Sbjct: 691 NAIPADWTAGATYDSNI 741
>ref|NM_120002.2| Arabidopsis thaliana ATEXLA2 (ARABIDOPSIS THALIANA EXPANSIN-LIKE
A2) AT4G38400 (ATEXLA2) mRNA, complete cds
Length = 1101
Score = 60.6 bits (126), Expect(3) = 4e-023
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = -3 / +3
Query: 904 GIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWK 725
GI+D+E+RRV C Y + V E NPNYLA+ + Y ++V + I S+ W
Sbjct: 465 GIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWS 644
Query: 724 PMKLSWGAIWRMD 686
M S GA+W D
Sbjct: 645 YMTRSHGAVWVTD 683
Score = 59.7 bits (124), Expect(3) = 4e-023
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = -3 / +3
Query: 1135 YSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
++G A I+KDG GCG+C++VRCK CS TV +TD+N
Sbjct: 234 FAGHIAAALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLN 371
Score = 28.6 bits (56), Expect(3) = 4e-023
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3 / +3
Query: 634 GKKVIAKDVIPANWRPDAVYTSNVQ 560
GK V ++ V+PANW Y + VQ
Sbjct: 738 GKMVWSQRVLPANWEAGKSYDAGVQ 812
>gb|AF378855.1|AF378855 Arabidopsis thaliana AT4g38400/F22I13_170 mRNA, complete cds
Length = 1060
Score = 60.6 bits (126), Expect(3) = 4e-023
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = -3 / +3
Query: 904 GIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWK 725
GI+D+E+RRV C Y + V E NPNYLA+ + Y ++V + I S+ W
Sbjct: 465 GIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWS 644
Query: 724 PMKLSWGAIWRMD 686
M S GA+W D
Sbjct: 645 YMTRSHGAVWVTD 683
Score = 59.7 bits (124), Expect(3) = 4e-023
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = -3 / +3
Query: 1135 YSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
++G A I+KDG GCG+C++VRCK CS TV +TD+N
Sbjct: 234 FAGHIAAALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLN 371
Score = 28.6 bits (56), Expect(3) = 4e-023
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3 / +3
Query: 634 GKKVIAKDVIPANWRPDAVYTSNVQ 560
GK V ++ V+PANW Y + VQ
Sbjct: 738 GKMVWSQRVLPANWEAGKSYDAGVQ 812
>gb|CK120898.1|CK120898 205h02.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H02205
5-PRIME, mRNA sequence
Length = 816
Score = 60.6 bits (126), Expect(3) = 4e-023
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = -3 / +3
Query: 904 GIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWK 725
GI+D+E+RRV C Y + V E NPNYLA+ + Y ++V + I S+ W
Sbjct: 282 GIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWS 461
Query: 724 PMKLSWGAIWRMD 686
M S GA+W D
Sbjct: 462 YMTRSHGAVWVTD 500
Score = 59.7 bits (124), Expect(3) = 4e-023
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = -3 / +3
Query: 1135 YSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
++G A I+KDG GCG+C++VRCK CS TV +TD+N
Sbjct: 51 FAGHIAAALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLN 188
Score = 28.6 bits (56), Expect(3) = 4e-023
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3 / +3
Query: 634 GKKVIAKDVIPANWRPDAVYTSNVQ 560
GK V ++ V+PANW Y + VQ
Sbjct: 555 GKMVWSQRVLPANWEAGKSYDAGVQ 629
>gb|AY050470.1| Arabidopsis thaliana AT4g38400/F22I13_170 mRNA, complete cds
Length = 798
Score = 60.6 bits (126), Expect(3) = 4e-023
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = -3 / +1
Query: 904 GIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWK 725
GI+D+E+RRV C Y + V E NPNYLA+ + Y ++V + I S+ W
Sbjct: 394 GIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWS 573
Query: 724 PMKLSWGAIWRMD 686
M S GA+W D
Sbjct: 574 YMTRSHGAVWVTD 612
Score = 59.7 bits (124), Expect(3) = 4e-023
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = -3 / +1
Query: 1135 YSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
++G A I+KDG GCG+C++VRCK CS TV +TD+N
Sbjct: 163 FAGHIAAALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLN 300
Score = 28.6 bits (56), Expect(3) = 4e-023
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3 / +1
Query: 634 GKKVIAKDVIPANWRPDAVYTSNVQ 560
GK V ++ V+PANW Y + VQ
Sbjct: 667 GKMVWSQRVLPANWEAGKSYDAGVQ 741
>emb|AX507256.1| Sequence 1951 from Patent WO0216655
Length = 798
Score = 60.6 bits (126), Expect(3) = 4e-023
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = -3 / +1
Query: 904 GIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWK 725
GI+D+E+RRV C Y + V E NPNYLA+ + Y ++V + I S+ W
Sbjct: 394 GIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWS 573
Query: 724 PMKLSWGAIWRMD 686
M S GA+W D
Sbjct: 574 YMTRSHGAVWVTD 612
Score = 59.7 bits (124), Expect(3) = 4e-023
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = -3 / +1
Query: 1135 YSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
++G A I+KDG GCG+C++VRCK CS TV +TD+N
Sbjct: 163 FAGHIAAALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLN 300
Score = 28.6 bits (56), Expect(3) = 4e-023
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3 / +1
Query: 634 GKKVIAKDVIPANWRPDAVYTSNVQ 560
GK V ++ V+PANW Y + VQ
Sbjct: 667 GKMVWSQRVLPANWEAGKSYDAGVQ 741
>gb|CK121050.1|CK121050 204n16.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011N16204
5-PRIME, mRNA sequence
Length = 790
Score = 60.6 bits (126), Expect(3) = 4e-023
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = -3 / +3
Query: 904 GIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWK 725
GI+D+E+RRV C Y + V E NPNYLA+ + Y ++V + I S+ W
Sbjct: 282 GIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWS 461
Query: 724 PMKLSWGAIWRMD 686
M S GA+W D
Sbjct: 462 YMTRSHGAVWVTD 500
Score = 59.7 bits (124), Expect(3) = 4e-023
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = -3 / +3
Query: 1135 YSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
++G A I+KDG GCG+C++VRCK CS TV +TD+N
Sbjct: 51 FAGHIAAALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLN 188
Score = 28.6 bits (56), Expect(3) = 4e-023
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3 / +3
Query: 634 GKKVIAKDVIPANWRPDAVYTSNVQ 560
GK V ++ V+PANW Y + VQ
Sbjct: 555 GKMVWSQRVLPANWEAGKSYDAGVQ 629
>gb|CB252136.1|CB252136 34-E015332-019-005-D09-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768D095Q 5-PRIME, mRNA sequence
Length = 704
Score = 60.6 bits (126), Expect(3) = 1e-022
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = -3 / +2
Query: 904 GIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWK 725
GI+D+E+RRV C Y + V E NPNYLA+ + Y ++V + I S+ W
Sbjct: 227 GIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWS 406
Query: 724 PMKLSWGAIWRMD 686
M S GA+W D
Sbjct: 407 YMTRSHGAVWVTD 445
Score = 57.9 bits (120), Expect(3) = 1e-022
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = -3 / +2
Query: 1129 GMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
G A I+KDG GCG+C++VRCK CS TV +TD+N
Sbjct: 2 GHIAAALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLN 133
Score = 28.6 bits (56), Expect(3) = 1e-022
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3 / +2
Query: 634 GKKVIAKDVIPANWRPDAVYTSNVQ 560
GK V ++ V+PANW Y + VQ
Sbjct: 500 GKMVWSQRVLPANWEAGKSYDAGVQ 574
>gb|BU635450.1|BU635450 023C04 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 752
Score = 81.3 bits (171), Expect(2) = 1e-022
Identities = 33/86 (38%), Positives = 54/86 (62%)
Frame = -3 / +1
Query: 973 FDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLV 794
F LS KA+G +A+PG +++ G+++VE++R+ C+Y + EK NP+YLA+LV
Sbjct: 406 FILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILV 585
Query: 793 KYVADDGDIVLMEIQDKLSAEWKPMK 716
YV DI+ +E+ + EW+ MK
Sbjct: 586 LYVGGVNDILAVEVWQEDCKEWRRMK 663
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -3 / +1
Query: 1102 IFKDGKGCGSCYEVRCKEKPECSGNPVTVYITD 1004
++ +G GCG+CY+VRCK P CS V V TD
Sbjct: 283 LWNNGTGCGACYQVRCKIAPHCSEERVYVVATD 381
>dbj|AK117110.1| Arabidopsis thaliana At3g45960 mRNA for unknown protein, complete
cds, clone: RAFL16-65-B10
Length = 1072
Score = 58.8 bits (122), Expect(3) = 2e-022
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = -3 / +3
Query: 931 GLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEI 752
G++ + GI+DVE++RV C Y V E PNYLA+ + Y ++V ++I
Sbjct: 522 GVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDI 701
Query: 751 QDKLSAEWKPMKLSWGAIWRMD 686
S++W M S GA+W D
Sbjct: 702 APVGSSQWSYMSRSHGAVWATD 767
Score = 55.1 bits (114), Expect(3) = 2e-022
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3 / +3
Query: 1135 YSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
++G A I+KDG GCG+C++VRCK C+ V +TD+N
Sbjct: 318 FAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLN 455
Score = 32.7 bits (65), Expect(3) = 2e-022
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3 / +3
Query: 634 GKKVIAKDVIPANWRPDAVYTSNVQ 560
GK V +K V+PANW +Y + VQ
Sbjct: 822 GKTVWSKRVLPANWNSGRIYDAGVQ 896
>ref|NM_114465.2| Arabidopsis thaliana ATEXLA3 (ARABIDOPSIS THALIANA EXPANSIN-LIKE
A3) AT3G45960 (ATEXLA3) transcript variant AT3G45960.1
mRNA, complete cds
Length = 1057
Score = 58.8 bits (122), Expect(3) = 2e-022
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = -3 / +3
Query: 931 GLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEI 752
G++ + GI+DVE++RV C Y V E PNYLA+ + Y ++V ++I
Sbjct: 522 GVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDI 701
Query: 751 QDKLSAEWKPMKLSWGAIWRMD 686
S++W M S GA+W D
Sbjct: 702 APVGSSQWSYMSRSHGAVWATD 767
Score = 55.1 bits (114), Expect(3) = 2e-022
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3 / +3
Query: 1135 YSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
++G A I+KDG GCG+C++VRCK C+ V +TD+N
Sbjct: 318 FAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLN 455
Score = 32.7 bits (65), Expect(3) = 2e-022
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3 / +3
Query: 634 GKKVIAKDVIPANWRPDAVYTSNVQ 560
GK V +K V+PANW +Y + VQ
Sbjct: 822 GKTVWSKRVLPANWNSGRIYDAGVQ 896
>ref|NM_001035738.1| Arabidopsis thaliana ATEXLA3 (ARABIDOPSIS THALIANA EXPANSIN-LIKE
A3) AT3G45960 (ATEXLA3) transcript variant AT3G45960.2
mRNA, complete cds
Length = 972
Score = 58.8 bits (122), Expect(3) = 2e-022
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = -3 / +2
Query: 931 GLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEI 752
G++ + GI+DVE++RV C Y V E PNYLA+ + Y ++V ++I
Sbjct: 434 GVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDI 613
Query: 751 QDKLSAEWKPMKLSWGAIWRMD 686
S++W M S GA+W D
Sbjct: 614 APVGSSQWSYMSRSHGAVWATD 679
Score = 55.1 bits (114), Expect(3) = 2e-022
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3 / +2
Query: 1135 YSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 998
++G A I+KDG GCG+C++VRCK C+ V +TD+N
Sbjct: 230 FAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLN 367
Score = 32.7 bits (65), Expect(3) = 2e-022
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3 / +2
Query: 634 GKKVIAKDVIPANWRPDAVYTSNVQ 560
GK V +K V+PANW +Y + VQ
Sbjct: 734 GKTVWSKRVLPANWNSGRIYDAGVQ 808
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 51.9 bits (107), Expect(3) = 5e-022
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -3 / +2
Query: 640 ESGKKVIAKDVIPANWRPDAVYTSNVQF 557
ESGK V+A +VIPANW+P A+Y SNV F
Sbjct: 8669627 ESGKTVVASNVIPANWQPGAIYKSNVNF 8669710
Score = 48.7 bits (100), Expect(3) = 5e-022
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3 / +2
Query: 739 SAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 620
S +W M SWGA+W++D + L+ P S+R+TS K +
Sbjct: 8669525 SDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTV 8669644
Score = 44.1 bits (90), Expect(3) = 5e-022
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = -3 / +2
Query: 856 GQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAE 731
G+ + F ++KG N N AVLV YV DG+I +E++ L ++
Sbjct: 8669405 GKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSD 8669530
>emb|AL138646.2|ATT8B10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8B10
Length = 103787
Score = 50.1 bits (103), Expect(5) = 6e-022
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = -3 / +2
Query: 976 HFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRR 878
HFDLSGKAFG+LAK G D++R+ G + V ++R
Sbjct: 93335 HFDLSGKAFGALAKRGKGDQLRNLGELKVSYKR 93433
Score = 44.6 bits (91), Expect(5) = 6e-022
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -3 / +3
Query: 637 SGKKVIAKDVIPANWRPDAVYTSNVQF 557
SGKK+IAK VIP W P A+Y S V F
Sbjct: 93906 SGKKIIAKGVIPEKWSPGAIYHSKVNF 93986
Score = 44.6 bits (91), Expect(5) = 6e-022
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -3 / +2
Query: 1138 PYSGMTACGNVPIFKDGKGCGSCYEV 1061
PY M + G +FKDGKGCG+CY V
Sbjct: 93086 PYRCMVSAGGPSLFKDGKGCGACYRV 93163
Score = 37.7 bits (76), Expect(5) = 6e-022
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3 / +3
Query: 847 IVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQ 749
I H++ G NP Y++ VK+ DG+ +E+Q
Sbjct: 93696 IAIHVDAGANPYYMSFAVKFANGDGNFACIEVQ 93794
Score = 37.3 bits (75), Expect(5) = 6e-022
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3 / +3
Query: 733 EWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 620
++ M+ A+WR+ LKGPF+IRLTS K I
Sbjct: 93807 QYMKMEEMRSAVWRLSPGVPLKGPFNIRLTSAVSGKKI 93920
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,692,565,094
Number of Sequences: 1013581
Number of extensions: 38911553
Number of successful extensions: 205878
Number of sequences better than 1.0e-020: 41
length of database: 302,980,290
effective HSP length: 58
effective length of database: 244,192,592
effective search space used: 100363155312
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)