TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161272.2.15
(797 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_105241.3| Arabidopsis thaliana ATEXPB2 (ARABIDOPSIS ... 57 3e-042
gb|BT004056.1| Arabidopsis thaliana clone RAFL15-26-E06 (R2... 59 5e-039
ref|NM_130074.2| Arabidopsis thaliana ATEXPB4 (ARABIDOPSIS ... 59 5e-039
emb|BX821210.1|CNS0A89M Arabidopsis thaliana Full-length cD... 59 5e-039
gb|AY084478.1| Arabidopsis thaliana clone 109135 mRNA, comp... 55 1e-031
ref|NM_127640.1| Arabidopsis thaliana ATEXPB1 (ARABIDOPSIS ... 55 1e-031
gb|BT003932.1| Arabidopsis thaliana clone RAFL15-12-F16 (R2... 55 1e-031
gb|U95967.1|ATU95967 Arabidopsis thaliana beta-expansin mRN... 55 1e-031
gb|BT005024.1| Arabidopsis thaliana clone U20717 putative b... 55 1e-031
emb|AX589887.1| Sequence 69 from Patent WO02081695 55 1e-031
emb|AX652050.1| Sequence 948 from Patent WO03000898 55 1e-031
emb|CQ805662.1| Sequence 2073 from Patent WO2004035798 55 1e-031
ref|NM_118965.2| Arabidopsis thaliana ATEXPB3 (ARABIDOPSIS ... 55 5e-031
gb|AY087228.1| Arabidopsis thaliana clone 33023 mRNA, compl... 55 5e-031
gb|AY039986.1| Arabidopsis thaliana putative beta-expansin/... 55 5e-031
gb|AY133801.1| Arabidopsis thaliana clone U10238 putative b... 55 5e-031
gb|CF652567.1|CF652567 63-L020523-066-003-M15-SP6P MPIZ-ADI... 55 9e-028
ref|NM_115921.1| Arabidopsis thaliana ATEXPB5 (ARABIDOPSIS ... 46 2e-027
emb|BX827016.1|CNS0A45X Arabidopsis thaliana Full-length cD... 55 3e-027
gb|AY619565.1| Arabidopsis thaliana beta-expansin 6 (EXPB6)... 53 1e-026
gb|AC007234.3|AC007234 Genomic sequence for Arabidopsis tha... 57 9e-026
gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis ... 51 2e-025
ref|NM_117807.2| Arabidopsis thaliana ATEXLB1 (ARABIDOPSIS ... 84 5e-025
gb|BT005867.1| Arabidopsis thaliana At4g17030 gene, complet... 84 5e-025
emb|CQ805416.1| Sequence 1827 from Patent WO2004035798 84 5e-025
gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II s... 53 3e-024
gb|BU635450.1|BU635450 023C04 Infected Arabidopsis Leaf Ara... 80 5e-022
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 51 1e-021
>ref|NM_105241.3| Arabidopsis thaliana ATEXPB2 (ARABIDOPSIS THALIANA EXPANSIN B2)
AT1G65680 (ATEXPB2) mRNA, complete cds
Length = 822
Score = 57.4 bits (119), Expect(5) = 3e-042
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITD 88
GKGCG+CY+V+C K CS NPVTV ITD
Sbjct: 280 GKGCGACYQVKCTSKSACSKNPVTVVITD 366
Score = 51.5 bits (106), Expect(5) = 3e-042
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +2 / +1
Query: 452 ESGKKVIAKDIIPANWRPDAVYTSNVQF 535
ESGK V+A ++IPANW+P A+Y SNV F
Sbjct: 736 ESGKTVVASNVIPANWQPGAIYKSNVNF 819
Score = 48.7 bits (100), Expect(5) = 3e-042
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2 / +1
Query: 353 SAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 472
S +W M SWGA+W++D + L+ P S+R+TS K +
Sbjct: 634 SDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTV 753
Score = 48.3 bits (99), Expect(5) = 3e-042
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +2 / +1
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG AFG++A G + +LR+ G + + +++V C Y
Sbjct: 397 HFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNY 510
Score = 42.3 bits (86), Expect(5) = 3e-042
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAE 361
G+ + F ++KG N N AVLV +V DG+I +E++ L ++
Sbjct: 514 GKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSD 639
>gb|BT004056.1| Arabidopsis thaliana clone RAFL15-26-E06 (R20474) putative
beta-expansin (At2g45110) mRNA, complete cds
Length = 977
Score = 58.8 bits (122), Expect(5) = 5e-039
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +2 / +3
Query: 110 PYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
P H DLSGKA G+LAKPG D+LR G++ V ++R C Y
Sbjct: 429 PVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLY 548
Score = 54.7 bits (113), Expect(5) = 5e-039
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITD 88
GKGCG+CY+V C P CSG+P+TV ITD
Sbjct: 312 GKGCGTCYQVVCIGHPACSGSPITVTITD 398
Score = 41.8 bits (85), Expect(5) = 5e-039
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +2 / +3
Query: 389 AIWRMDTAKALKGPFSIRLTSESGKKVI 472
A+W++++ AL+GPF+IRLTS KVI
Sbjct: 702 AVWKVNSGSALRGPFNIRLTSGESHKVI 785
Score = 41.4 bits (84), Expect(5) = 5e-039
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2 / +3
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
+ ES K ++A ++IPANW+PD Y S V F
Sbjct: 762 SGESHKVIVAYNVIPANWKPDESYRSIVNF 851
Score = 40.0 bits (81), Expect(5) = 5e-039
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQ 343
G IVF ++ G NP Y++ +V++ DGD+ +EIQ
Sbjct: 552 GTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQ 659
>ref|NM_130074.2| Arabidopsis thaliana ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4)
AT2G45110 (ATEXPB4) mRNA, complete cds
Length = 956
Score = 58.8 bits (122), Expect(5) = 5e-039
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +2 / +3
Query: 110 PYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
P H DLSGKA G+LAKPG D+LR G++ V ++R C Y
Sbjct: 429 PVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLY 548
Score = 54.7 bits (113), Expect(5) = 5e-039
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITD 88
GKGCG+CY+V C P CSG+P+TV ITD
Sbjct: 312 GKGCGTCYQVVCIGHPACSGSPITVTITD 398
Score = 41.8 bits (85), Expect(5) = 5e-039
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +2 / +3
Query: 389 AIWRMDTAKALKGPFSIRLTSESGKKVI 472
A+W++++ AL+GPF+IRLTS KVI
Sbjct: 702 AVWKVNSGSALRGPFNIRLTSGESHKVI 785
Score = 41.4 bits (84), Expect(5) = 5e-039
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2 / +3
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
+ ES K ++A ++IPANW+PD Y S V F
Sbjct: 762 SGESHKVIVAYNVIPANWKPDESYRSIVNF 851
Score = 40.0 bits (81), Expect(5) = 5e-039
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQ 343
G IVF ++ G NP Y++ +V++ DGD+ +EIQ
Sbjct: 552 GTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQ 659
>emb|BX821210.1|CNS0A89M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL25ZE08 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 923
Score = 58.8 bits (122), Expect(5) = 5e-039
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +2 / +2
Query: 110 PYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
P H DLSGKA G+LAKPG D+LR G++ V ++R C Y
Sbjct: 398 PVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLY 517
Score = 54.7 bits (113), Expect(5) = 5e-039
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITD 88
GKGCG+CY+V C P CSG+P+TV ITD
Sbjct: 281 GKGCGTCYQVVCIGHPACSGSPITVTITD 367
Score = 41.8 bits (85), Expect(5) = 5e-039
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +2 / +2
Query: 389 AIWRMDTAKALKGPFSIRLTSESGKKVI 472
A+W++++ AL+GPF+IRLTS KVI
Sbjct: 671 AVWKVNSGSALRGPFNIRLTSGESHKVI 754
Score = 41.4 bits (84), Expect(5) = 5e-039
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2 / +2
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
+ ES K ++A ++IPANW+PD Y S V F
Sbjct: 731 SGESHKVIVAYNVIPANWKPDESYRSIVNF 820
Score = 40.0 bits (81), Expect(5) = 5e-039
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQ 343
G IVF ++ G NP Y++ +V++ DGD+ +EIQ
Sbjct: 521 GTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQ 628
>gb|AY084478.1| Arabidopsis thaliana clone 109135 mRNA, complete sequence
Length = 1137
Score = 54.7 bits (113), Expect(4) = 1e-031
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2 / +2
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG AFG +A PG N +R+ G++++ +RR CKY
Sbjct: 449 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 562
Score = 53.3 bits (110), Expect(4) = 1e-031
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 397
G+ I FH+ G +L++L+++ +GDI M I+ S EW MK WGA W
Sbjct: 566 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 727
Score = 47.8 bits (98), Expect(4) = 1e-031
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMN 94
G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 323 GEGCGACYKVRCLDKTICSKRAVTIIATDQS 415
Score = 38.6 bits (78), Expect(4) = 1e-031
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
T + K + A D+IP+NW P A YTS + F
Sbjct: 776 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 865
>ref|NM_127640.1| Arabidopsis thaliana ATEXPB1 (ARABIDOPSIS THALIANA EXPANSIN B1)
AT2G20750 (ATEXPB1) mRNA, complete cds
Length = 1137
Score = 54.7 bits (113), Expect(4) = 1e-031
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2 / +2
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG AFG +A PG N +R+ G++++ +RR CKY
Sbjct: 449 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 562
Score = 53.3 bits (110), Expect(4) = 1e-031
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 397
G+ I FH+ G +L++L+++ +GDI M I+ S EW MK WGA W
Sbjct: 566 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 727
Score = 47.8 bits (98), Expect(4) = 1e-031
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMN 94
G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 323 GEGCGACYKVRCLDKTICSKRAVTIIATDQS 415
Score = 38.6 bits (78), Expect(4) = 1e-031
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
T + K + A D+IP+NW P A YTS + F
Sbjct: 776 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 865
>gb|BT003932.1| Arabidopsis thaliana clone RAFL15-12-F16 (R20717) putative
beta-expansin pollen allergen protein (At2g20750) mRNA,
complete cds
Length = 1124
Score = 54.7 bits (113), Expect(4) = 1e-031
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2 / +3
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG AFG +A PG N +R+ G++++ +RR CKY
Sbjct: 447 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 560
Score = 53.3 bits (110), Expect(4) = 1e-031
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 397
G+ I FH+ G +L++L+++ +GDI M I+ S EW MK WGA W
Sbjct: 564 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 725
Score = 47.8 bits (98), Expect(4) = 1e-031
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMN 94
G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 321 GEGCGACYKVRCLDKTICSKRAVTIIATDQS 413
Score = 38.6 bits (78), Expect(4) = 1e-031
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / +3
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
T + K + A D+IP+NW P A YTS + F
Sbjct: 774 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 863
>gb|U95967.1|ATU95967 Arabidopsis thaliana beta-expansin mRNA, partial cds
Length = 1037
Score = 54.7 bits (113), Expect(4) = 1e-031
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2 / +3
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG AFG +A PG N +R+ G++++ +RR CKY
Sbjct: 351 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 464
Score = 53.3 bits (110), Expect(4) = 1e-031
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 397
G+ I FH+ G +L++L+++ +GDI M I+ S EW MK WGA W
Sbjct: 468 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 629
Score = 47.8 bits (98), Expect(4) = 1e-031
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMN 94
G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 225 GEGCGACYKVRCLDKTICSKRAVTIIATDQS 317
Score = 38.6 bits (78), Expect(4) = 1e-031
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / +3
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
T + K + A D+IP+NW P A YTS + F
Sbjct: 678 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 767
>gb|BT005024.1| Arabidopsis thaliana clone U20717 putative beta-expansin pollen
allergen protein (At2g20750) mRNA, complete cds
Length = 847
Score = 54.7 bits (113), Expect(4) = 1e-031
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2 / +1
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG AFG +A PG N +R+ G++++ +RR CKY
Sbjct: 385 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 498
Score = 53.3 bits (110), Expect(4) = 1e-031
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 397
G+ I FH+ G +L++L+++ +GDI M I+ S EW MK WGA W
Sbjct: 502 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 663
Score = 47.8 bits (98), Expect(4) = 1e-031
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMN 94
G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 259 GEGCGACYKVRCLDKTICSKRAVTIIATDQS 351
Score = 38.6 bits (78), Expect(4) = 1e-031
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
T + K + A D+IP+NW P A YTS + F
Sbjct: 712 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 801
>emb|AX589887.1| Sequence 69 from Patent WO02081695
Length = 816
Score = 54.7 bits (113), Expect(4) = 1e-031
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2 / +1
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG AFG +A PG N +R+ G++++ +RR CKY
Sbjct: 385 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 498
Score = 53.3 bits (110), Expect(4) = 1e-031
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 397
G+ I FH+ G +L++L+++ +GDI M I+ S EW MK WGA W
Sbjct: 502 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 663
Score = 47.8 bits (98), Expect(4) = 1e-031
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMN 94
G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 259 GEGCGACYKVRCLDKTICSKRAVTIIATDQS 351
Score = 38.6 bits (78), Expect(4) = 1e-031
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
T + K + A D+IP+NW P A YTS + F
Sbjct: 712 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 801
>emb|AX652050.1| Sequence 948 from Patent WO03000898
Length = 816
Score = 54.7 bits (113), Expect(4) = 1e-031
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2 / +1
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG AFG +A PG N +R+ G++++ +RR CKY
Sbjct: 385 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 498
Score = 53.3 bits (110), Expect(4) = 1e-031
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 397
G+ I FH+ G +L++L+++ +GDI M I+ S EW MK WGA W
Sbjct: 502 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 663
Score = 47.8 bits (98), Expect(4) = 1e-031
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMN 94
G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 259 GEGCGACYKVRCLDKTICSKRAVTIIATDQS 351
Score = 38.6 bits (78), Expect(4) = 1e-031
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
T + K + A D+IP+NW P A YTS + F
Sbjct: 712 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 801
>emb|CQ805662.1| Sequence 2073 from Patent WO2004035798
Length = 816
Score = 54.7 bits (113), Expect(4) = 1e-031
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2 / +1
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG AFG +A PG N +R+ G++++ +RR CKY
Sbjct: 385 HFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKY 498
Score = 53.3 bits (110), Expect(4) = 1e-031
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 397
G+ I FH+ G +L++L+++ +GDI M I+ S EW MK WGA W
Sbjct: 502 GKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 663
Score = 47.8 bits (98), Expect(4) = 1e-031
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMN 94
G+GCG+CY+VRC +K CS VT+ TD +
Sbjct: 259 GEGCGACYKVRCLDKTICSKRAVTIIATDQS 351
Score = 38.6 bits (78), Expect(4) = 1e-031
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
T + K + A D+IP+NW P A YTS + F
Sbjct: 712 TLSNNKTLSATDVIPSNWVPKATYTSRLNF 801
>ref|NM_118965.2| Arabidopsis thaliana ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3)
AT4G28250 (ATEXPB3) mRNA, complete cds
Length = 1299
Score = 54.7 bits (113), Expect(4) = 5e-031
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 397
G+ I FH+ +G +L++LV+F +GDI M I+ + EW MK WGA W
Sbjct: 577 GKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW 738
Score = 50.1 bits (103), Expect(4) = 5e-031
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITD 88
G+GCG+CY+VRC +K CS VTV ITD
Sbjct: 343 GEGCGACYKVRCLDKSICSRRAVTVIITD 429
Score = 48.3 bits (99), Expect(4) = 5e-031
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +2 / +1
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG FG LA G + LR+ G++ V +RR CKY
Sbjct: 460 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKY 573
Score = 39.1 bits (79), Expect(4) = 5e-031
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
T +GK + A D++P NW P A Y+S + F
Sbjct: 787 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 876
>gb|AY087228.1| Arabidopsis thaliana clone 33023 mRNA, complete sequence
Length = 1257
Score = 54.7 bits (113), Expect(4) = 5e-031
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 397
G+ I FH+ +G +L++LV+F +GDI M I+ + EW MK WGA W
Sbjct: 582 GKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW 743
Score = 50.1 bits (103), Expect(4) = 5e-031
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITD 88
G+GCG+CY+VRC +K CS VTV ITD
Sbjct: 348 GEGCGACYKVRCLDKSICSRRAVTVIITD 434
Score = 48.3 bits (99), Expect(4) = 5e-031
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +2 / +3
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG FG LA G + LR+ G++ V +RR CKY
Sbjct: 465 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKY 578
Score = 39.1 bits (79), Expect(4) = 5e-031
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2 / +3
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
T +GK + A D++P NW P A Y+S + F
Sbjct: 792 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 881
>gb|AY039986.1| Arabidopsis thaliana putative beta-expansin/allergen protein
(At4g28250) mRNA, complete cds
Length = 1216
Score = 54.7 bits (113), Expect(4) = 5e-031
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 397
G+ I FH+ +G +L++LV+F +GDI M I+ + EW MK WGA W
Sbjct: 577 GKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW 738
Score = 50.1 bits (103), Expect(4) = 5e-031
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITD 88
G+GCG+CY+VRC +K CS VTV ITD
Sbjct: 343 GEGCGACYKVRCLDKSICSRRAVTVIITD 429
Score = 48.3 bits (99), Expect(4) = 5e-031
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +2 / +1
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG FG LA G + LR+ G++ V +RR CKY
Sbjct: 460 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKY 573
Score = 39.1 bits (79), Expect(4) = 5e-031
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
T +GK + A D++P NW P A Y+S + F
Sbjct: 787 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 876
>gb|AY133801.1| Arabidopsis thaliana clone U10238 putative beta-expansin/allergen
protein (At4g28250) mRNA, complete cds
Length = 826
Score = 54.7 bits (113), Expect(4) = 5e-031
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 397
G+ I FH+ +G +L++LV+F +GDI M I+ + EW MK WGA W
Sbjct: 481 GKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW 642
Score = 50.1 bits (103), Expect(4) = 5e-031
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITD 88
G+GCG+CY+VRC +K CS VTV ITD
Sbjct: 247 GEGCGACYKVRCLDKSICSRRAVTVIITD 333
Score = 48.3 bits (99), Expect(4) = 5e-031
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +2 / +1
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG FG LA G + LR+ G++ V +RR CKY
Sbjct: 364 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKY 477
Score = 39.1 bits (79), Expect(4) = 5e-031
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
T +GK + A D++P NW P A Y+S + F
Sbjct: 691 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 780
>gb|CF652567.1|CF652567 63-L020523-066-003-M15-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001M153Q 5-PRIME, mRNA sequence
Length = 816
Score = 54.7 bits (113), Expect(4) = 9e-028
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 397
G+ I FH+ +G +L++LV+F +GDI M I+ + EW MK WGA W
Sbjct: 566 GKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW 727
Score = 50.1 bits (103), Expect(4) = 9e-028
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITD 88
G+GCG+CY+VRC +K CS VTV ITD
Sbjct: 332 GEGCGACYKVRCLDKSICSRRAVTVIITD 418
Score = 48.3 bits (99), Expect(4) = 9e-028
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +2 / +2
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG FG LA G + LR+ G++ V +RR CKY
Sbjct: 449 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKY 562
Score = 28.1 bits (55), Expect(4) = 9e-028
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2 / +2
Query: 419 LKGPFSIRLTSESGKKVIA 475
LKGPFSI+LT+ S K ++
Sbjct: 746 LKGPFSIKLTTLSAGKTLS 802
>ref|NM_115921.1| Arabidopsis thaliana ATEXPB5 (ARABIDOPSIS THALIANA EXPANSIN B5)
AT3G60570 (ATEXPB5) mRNA, complete cds
Length = 759
Score = 45.5 bits (93), Expect(5) = 2e-027
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +2 / +1
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCG 190
HFDLSGKAFG+LAK G D+LR+ G
Sbjct: 355 HFDLSGKAFGALAKRGKGDQLRNLG 429
Score = 44.1 bits (90), Expect(5) = 2e-027
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2 / +1
Query: 455 SGKKVIAKDIIPANWRPDAVYTSNVQF 535
SGKK+IAK +IP W P A+Y S V F
Sbjct: 655 SGKKIIAKGVIPEKWSPGAIYHSKVNF 735
Score = 39.1 bits (79), Expect(5) = 2e-027
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2 / +1
Query: 245 IVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQ 343
I H++ G NP Y++ VKF DG+ +E+Q
Sbjct: 445 IAIHVDAGANPYYMSFAVKFANGDGNFACIEVQ 543
Score = 37.3 bits (75), Expect(5) = 2e-027
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2 / +1
Query: 359 EWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 472
++ M+ A+WR+ LKGPF+IRLTS K I
Sbjct: 556 QYMKMEEMRSAVWRLSPGVPLKGPFNIRLTSAVSGKKI 669
Score = 30.9 bits (61), Expect(5) = 2e-027
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRC 37
GKGCG+CY ++C
Sbjct: 241 GKGCGACYRLKC 276
>emb|BX827016.1|CNS0A45X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB87ZG06 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1257
Score = 54.7 bits (113), Expect(4) = 3e-027
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 397
G+ I FH+ +G +L++LV+F +GDI M I+ + EW MK WGA W
Sbjct: 566 GKNIAFHVNEGSTDFWLSMLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW 727
Score = 48.3 bits (99), Expect(4) = 3e-027
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +2 / +2
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
HFDLSG FG LA G + LR+ G++ V +RR CKY
Sbjct: 449 HFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKY 562
Score = 39.1 bits (79), Expect(4) = 3e-027
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
T +GK + A D++P NW P A Y+S + F
Sbjct: 776 TLSAGKTLSATDVVPRNWAPKATYSSRLNF 865
Score = 37.3 bits (75), Expect(4) = 3e-027
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2 / +2
Query: 17 SCYEVRCKEKPECSGNPVTVFITD 88
+CY+VRC +K CS VTV ITD
Sbjct: 347 TCYKVRCLDKSICSRRAVTVIITD 418
>gb|AY619565.1| Arabidopsis thaliana beta-expansin 6 (EXPB6) gene, complete cds
Length = 2504
Score = 52.8 bits (109), Expect(6) = 1e-026
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2 / +2
Query: 110 PYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
P HFDLSGKA G+LA+PG D+LR G++ V + R Y
Sbjct: 1865 PAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYIRYLYTY 1984
Score = 38.6 bits (78), Expect(6) = 1e-026
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2 / +1
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
++ES V+A ++IPANW+P+ Y S V F
Sbjct: 2407 SAESHNVVVAYNVIPANWKPNETYRSVVNF 2496
Score = 38.6 bits (78), Expect(6) = 1e-026
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2 / +1
Query: 368 PMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 472
PM+ A+W++++ L GPF+IRLTS V+
Sbjct: 2326 PMQEMRSAVWKVNSGSPLTGPFNIRLTSAESHNVV 2430
Score = 36.8 bits (74), Expect(6) = 1e-026
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2 / +1
Query: 245 IVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQ 343
I F ++ G NP Y++ +V++ DGD+ EIQ
Sbjct: 2206 IAFRMDPGANPYYISFVVEYENGDGDLAYTEIQ 2304
Score = 32.7 bits (65), Expect(6) = 1e-026
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2 / +2
Query: 23 YEVRCKEKPECSGNPVTVFITD 88
Y++ C P CS P+TV ITD
Sbjct: 1769 YQILCNGHPACSRRPITVTITD 1834
Score = 22.6 bits (43), Expect(6) = 1e-026
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 2 GKGCGSCYEV 31
G GCG+C++V
Sbjct: 1370 GIGCGTCFQV 1399
>gb|AC007234.3|AC007234 Genomic sequence for Arabidopsis thaliana BAC F1E22, complete sequence
Length = 92356
Score = 56.5 bits (117), Expect(5) = 7e-023
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +2 / +2
Query: 110 PYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKY 229
P HFDLSGKA G+LA+PG D+LR G++ V +RR Y
Sbjct: 27551 PAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYRRYLYTY 27670
Score = 51.5 bits (106), Expect(6) = 9e-026
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +2 / +3
Query: 452 ESGKKVIAKDIIPANWRPDAVYTSNVQF 535
ESGK V+A ++IPANW+P A+Y SNV F
Sbjct: 25830 ESGKTVVASNVIPANWQPGAIYKSNVNF 25913
Score = 48.7 bits (100), Expect(6) = 9e-026
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2 / +3
Query: 353 SAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 472
S +W M SWGA+W++D + L+ P S+R+TS K +
Sbjct: 25728 SDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTV 25847
Score = 43.2 bits (88), Expect(5) = 7e-023
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2 / +3
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQFY*TLNC 553
++ES K V+A ++IPANW+P+ Y S V F *+ C
Sbjct: 28092 SAESHKVVLAYNVIPANWKPNETYRSVVNFK*SFLC 28199
Score = 42.3 bits (86), Expect(6) = 9e-026
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAE 361
G+ + F ++KG N N AVLV +V DG+I +E++ L ++
Sbjct: 25608 GKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSD 25733
Score = 41.8 bits (85), Expect(5) = 7e-023
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2 / +3
Query: 359 EWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 472
E+ PM+ A+W++ + L GPF+IRLTS KV+
Sbjct: 28002 EFIPMQEMRSAVWKISSGSPLTGPFNIRLTSAESHKVV 28115
Score = 39.1 bits (79), Expect(6) = 9e-026
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +2 / +3
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRR 214
HFDLSG AFG++A G + +LR+ G + + +++
Sbjct: 25374 HFDLSGTAFGAMAISGQDSQLRNVGELQILYKK 25472
Score = 37.7 bits (76), Expect(5) = 7e-023
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2 / +3
Query: 245 IVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQ 343
I F ++ G NP Y++ +V++ DGD+ +EIQ
Sbjct: 27891 IAFRMDPGANPYYISFVVEYENGDGDLAYIEIQ 27989
Score = 35.0 bits (70), Expect(6) = 9e-026
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 26 EVRCKEKPECSGNPVTVFITD 88
+V+C K CS NPVTV ITD
Sbjct: 25281 QVKCTSKSACSKNPVTVVITD 25343
Score = 32.7 bits (65), Expect(5) = 7e-023
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2 / +2
Query: 23 YEVRCKEKPECSGNPVTVFITD 88
Y++ C P CS P+TV ITD
Sbjct: 27455 YQILCNGHPACSRRPITVTITD 27520
Score = 28.1 bits (55), Expect(6) = 9e-026
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +3
Query: 2 GKGCGSCYEV 31
GKGCG+CY+V
Sbjct: 25173 GKGCGACYQV 25202
>gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 109560
Score = 51.5 bits (106), Expect(6) = 2e-025
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +2 / +1
Query: 452 ESGKKVIAKDIIPANWRPDAVYTSNVQF 535
ESGK V+A ++IPANW+P A+Y SNV F
Sbjct: 107383 ESGKTVVASNVIPANWQPGAIYKSNVNF 107466
Score = 48.7 bits (100), Expect(6) = 2e-025
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2 / +1
Query: 353 SAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 472
S +W M SWGA+W++D + L+ P S+R+TS K +
Sbjct: 107281 SDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTV 107400
Score = 42.3 bits (86), Expect(6) = 2e-025
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAE 361
G+ + F ++KG N N AVLV +V DG+I +E++ L ++
Sbjct: 107161 GKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSD 107286
Score = 39.1 bits (79), Expect(6) = 2e-025
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +2 / +1
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRR 214
HFDLSG AFG++A G + +LR+ G + + +++
Sbjct: 106927 HFDLSGTAFGAMAISGQDSQLRNVGELQILYKK 107025
Score = 35.0 bits (70), Expect(6) = 2e-025
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 26 EVRCKEKPECSGNPVTVFITD 88
+V+C K CS NPVTV ITD
Sbjct: 106834 QVKCTSKSACSKNPVTVVITD 106896
Score = 28.1 bits (55), Expect(6) = 2e-025
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 2 GKGCGSCYEV 31
GKGCG+CY+V
Sbjct: 106726 GKGCGACYQV 106755
>ref|NM_117807.2| Arabidopsis thaliana ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE
B1) AT4G17030 (ATEXLB1) mRNA, complete cds
Length = 1093
Score = 83.5 bits (176), Expect(3) = 5e-025
Identities = 34/92 (36%), Positives = 58/92 (63%)
Frame = +2 / +2
Query: 119 FDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLV 298
F LS KA+G +A+PG ++L G+++VE++R+ C+Y + EK NP+YLA+LV
Sbjct: 437 FILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILV 616
Query: 299 KFVADDGDIVLMEIQDKLSAEWKPMKLSWGAI 394
+V DI+ +E+ + EW+ M+ +GA+
Sbjct: 617 LYVGGVNDILAVEVWQEDCKEWRRMRRVFGAV 712
Score = 46.4 bits (95), Expect(3) = 5e-025
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITD 88
G GCG+CY+VRCK P CS V V TD
Sbjct: 326 GTGCGACYQVRCKIPPHCSEEGVYVVATD 412
Score = 24.4 bits (47), Expect(3) = 5e-025
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2 / +2
Query: 485 IPANWRPDAVYTSNV 529
IPA+W A Y SN+
Sbjct: 806 IPADWTAGATYDSNI 850
>gb|BT005867.1| Arabidopsis thaliana At4g17030 gene, complete cds
Length = 753
Score = 83.5 bits (176), Expect(3) = 5e-025
Identities = 34/92 (36%), Positives = 58/92 (63%)
Frame = +2 / +1
Query: 119 FDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLV 298
F LS KA+G +A+PG ++L G+++VE++R+ C+Y + EK NP+YLA+LV
Sbjct: 328 FILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILV 507
Query: 299 KFVADDGDIVLMEIQDKLSAEWKPMKLSWGAI 394
+V DI+ +E+ + EW+ M+ +GA+
Sbjct: 508 LYVGGVNDILAVEVWQEDCKEWRRMRRVFGAV 603
Score = 46.4 bits (95), Expect(3) = 5e-025
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITD 88
G GCG+CY+VRCK P CS V V TD
Sbjct: 217 GTGCGACYQVRCKIPPHCSEEGVYVVATD 303
Score = 24.4 bits (47), Expect(3) = 5e-025
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2 / +1
Query: 485 IPANWRPDAVYTSNV 529
IPA+W A Y SN+
Sbjct: 697 IPADWTAGATYDSNI 741
>emb|CQ805416.1| Sequence 1827 from Patent WO2004035798
Length = 753
Score = 83.5 bits (176), Expect(3) = 5e-025
Identities = 34/92 (36%), Positives = 58/92 (63%)
Frame = +2 / +1
Query: 119 FDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLV 298
F LS KA+G +A+PG ++L G+++VE++R+ C+Y + EK NP+YLA+LV
Sbjct: 328 FILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILV 507
Query: 299 KFVADDGDIVLMEIQDKLSAEWKPMKLSWGAI 394
+V DI+ +E+ + EW+ M+ +GA+
Sbjct: 508 LYVGGVNDILAVEVWQEDCKEWRRMRRVFGAV 603
Score = 46.4 bits (95), Expect(3) = 5e-025
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITD 88
G GCG+CY+VRCK P CS V V TD
Sbjct: 217 GTGCGACYQVRCKIPPHCSEEGVYVVATD 303
Score = 24.4 bits (47), Expect(3) = 5e-025
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2 / +1
Query: 485 IPANWRPDAVYTSNV 529
IPA+W A Y SN+
Sbjct: 697 IPADWTAGATYDSNI 741
>gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II section 241 of 255 of the complete
sequence. Sequence from clones T13E15, T14P1
Length = 87885
Score = 52.8 bits (109), Expect(6) = 3e-024
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +2 / +3
Query: 110 PYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRR 214
P H DLSGKA G+LAKPG D+LR G++ V ++R
Sbjct: 66078 PVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKR 66182
Score = 41.8 bits (85), Expect(6) = 3e-024
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +2 / +2
Query: 389 AIWRMDTAKALKGPFSIRLTSESGKKVI 472
A+W++++ AL+GPF+IRLTS KVI
Sbjct: 66713 AVWKVNSGSALRGPFNIRLTSGESHKVI 66796
Score = 41.4 bits (84), Expect(6) = 3e-024
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2 / +2
Query: 446 TSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
+ ES K ++A ++IPANW+PD Y S V F
Sbjct: 66773 SGESHKVIVAYNVIPANWKPDESYRSIVNF 66862
Score = 40.0 bits (81), Expect(6) = 3e-024
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQ 343
G IVF ++ G NP Y++ +V++ DGD+ +EIQ
Sbjct: 66563 GTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQ 66670
Score = 32.7 bits (65), Expect(6) = 3e-024
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 23 YEVRCKEKPECSGNPVTVFITD 88
Y V C P CSG+P+TV ITD
Sbjct: 65982 Y*VVCIGHPACSGSPITVTITD 66047
Score = 30.4 bits (60), Expect(6) = 3e-024
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVR 34
GKGCG+CY+VR
Sbjct: 65558 GKGCGTCYQVR 65590
>gb|BU635450.1|BU635450 023C04 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 752
Score = 80.3 bits (169), Expect(2) = 5e-022
Identities = 33/86 (38%), Positives = 54/86 (62%)
Frame = +2 / +1
Query: 119 FDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLV 298
F LS KA+G +A+PG ++L G+++VE++R+ C+Y + EK NP+YLA+LV
Sbjct: 406 FILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILV 585
Query: 299 KFVADDGDIVLMEIQDKLSAEWKPMK 376
+V DI+ +E+ + EW+ MK
Sbjct: 586 LYVGGVNDILAVEVWQEDCKEWRRMK 663
Score = 46.4 bits (95), Expect(2) = 5e-022
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITD 88
G GCG+CY+VRCK P CS V V TD
Sbjct: 295 GTGCGACYQVRCKIAPHCSEERVYVVATD 381
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 51.5 bits (106), Expect(3) = 1e-021
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +2 / +2
Query: 452 ESGKKVIAKDIIPANWRPDAVYTSNVQF 535
ESGK V+A ++IPANW+P A+Y SNV F
Sbjct: 8669627 ESGKTVVASNVIPANWQPGAIYKSNVNF 8669710
Score = 48.7 bits (100), Expect(3) = 1e-021
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2 / +2
Query: 353 SAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVI 472
S +W M SWGA+W++D + L+ P S+R+TS K +
Sbjct: 8669525 SDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTV 8669644
Score = 42.3 bits (86), Expect(3) = 1e-021
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAE 361
G+ + F ++KG N N AVLV +V DG+I +E++ L ++
Sbjct: 8669405 GKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSD 8669530
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,650,795,904
Number of Sequences: 1013581
Number of extensions: 23041710
Number of successful extensions: 167966
Number of sequences better than 1.0e-020: 29
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 51459928586
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)