TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161200.2.1
(845 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF074375.1|AF074375 Arabidopsis thaliana cellulase (DEC)... 226 1e-057
gb|U37702.1|ATU37702 Arabidopsis thaliana cellulase (OR16pe... 226 1e-057
emb|A83259.1| Sequence 1 from Patent WO9850568 226 1e-057
gb|AY037218.1| Arabidopsis thaliana AT5g49720/K2I5_8 mRNA, ... 226 1e-057
dbj|E64634.1| Method for modifying plant cell wall component 226 1e-057
gb|BT002221.1| Arabidopsis thaliana At5g49720/K2I5_8 mRNA, ... 226 1e-057
gb|AY086165.1| Arabidopsis thaliana clone 21922 mRNA, compl... 226 1e-057
dbj|AK222193.1| Arabidopsis thaliana mRNA for cellulase hom... 226 1e-057
ref|NM_124350.2| Arabidopsis thaliana KOR1 (KORRIGAN); hydr... 226 1e-057
gb|AF074092.1|AF074092 Arabidopsis thaliana cellulase (DEC)... 215 2e-054
gb|AF073875.1|AF073875 Arabidopsis thaliana endo-1,4-beta-D... 215 2e-054
dbj|E64635.1| Method for modifying plant cell wall component 215 2e-054
dbj|AB025613.1| Arabidopsis thaliana genomic DNA, chromosom... 215 2e-054
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 215 2e-054
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 215 2e-054
gb|CW800642.1|CW800642 WiscDsLox329F10 Arabidopsis thaliana... 113 2e-048
gb|AV782845.1|AV782845 AV782845 RAFL5 Arabidopsis thaliana ... 193 8e-048
gb|CK119494.1|CK119494 212c03.p1 AtM1 Arabidopsis thaliana ... 187 5e-046
ref|NM_118559.1| Arabidopsis thaliana hydrolase, hydrolyzin... 116 2e-044
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 116 2e-041
emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosom... 116 2e-041
gb|AC005861.4|AC005861 Arabidopsis thaliana clone F23B24, *... 116 2e-041
emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome ... 116 2e-041
gb|CW801060.1|CW801060 WiscDsLox293-296invH12 Arabidopsis t... 116 3e-041
gb|BH254251.1|BH254251 SALK_016250 Arabidopsis thaliana TDN... 116 3e-041
emb|AX651256.1| Sequence 40 from Patent WO03000898 159 1e-037
ref|NM_105234.2| Arabidopsis thaliana hydrolase, hydrolyzin... 159 1e-037
gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis ... 153 6e-036
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 153 6e-036
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 153 6e-036
gb|CK120241.1|CK120241 208b21.p1 AtM1 Arabidopsis thaliana ... 128 2e-028
ref|NM_179018.1| Arabidopsis thaliana hydrolase, hydrolyzin... 71 7e-025
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 116 9e-025
ref|NM_118487.2| Arabidopsis thaliana hydrolase, hydrolyzin... 70 1e-024
emb|BX816994.1|CNS0ADD7 Arabidopsis thaliana Full-length cD... 69 1e-024
emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosom... 67 8e-024
emb|AL049482.1|ATF17A8 Arabidopsis thaliana DNA chromosome ... 67 8e-024
emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosom... 66 1e-023
emb|AL035394.1|ATF9D16 Arabidopsis thaliana DNA chromosome ... 66 1e-023
gb|AC016162.5|AC016162 Arabidopsis thaliana chromosome 1 BA... 70 3e-023
gb|AC016163.6|AC016163 Arabidopsis thaliana chromosome 1 BA... 70 3e-023
gb|AY086043.1| Arabidopsis thaliana clone 20797 mRNA, compl... 70 3e-023
ref|NM_105807.1| Arabidopsis thaliana hydrolase, hydrolyzin... 70 3e-023
emb|BX816524.1|CNS0AAUM Arabidopsis thaliana Full-length cD... 70 3e-023
gb|AI993884.1|AI993884 701515303 A. thaliana, Ohio State cl... 66 3e-023
gb|T76139.1|T76139 10917 Lambda-PRL2 Arabidopsis thaliana c... 66 4e-023
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 65 9e-023
gb|AF000657.1|ATAF000657 Arabidopsis thaliana BAC F19G10, c... 65 1e-022
gb|AY075630.1| Arabidopsis thaliana At1g22880/F19G10_16 mRN... 65 1e-022
ref|NM_001036005.1| Arabidopsis thaliana hydrolase, hydroly... 65 1e-022
ref|NM_102134.2| Arabidopsis thaliana hydrolase, hydrolyzin... 65 1e-022
gb|BX840426.1|BX840426 BX840426 Arabidopsis thaliana Siliqu... 65 1e-022
gb|AV540005.1|AV540005 AV540005 Arabidopsis thaliana roots ... 65 1e-022
gb|U17888.1|ATU17888 Arabidopsis thaliana beta-glucanase mR... 70 3e-022
gb|BP562456.2|BP562456 BP562456 RAFL9 Arabidopsis thaliana ... 64 7e-022
gb|BX834607.1|BX834607 BX834607 Arabidopsis thaliana Hormon... 65 1e-021
ref|NM_130021.2| Arabidopsis thaliana hydrolase, hydrolyzin... 65 5e-021
gb|AY079162.1| Arabidopsis thaliana AT4g02290/T2H3_5 mRNA, ... 62 6e-021
ref|NM_116462.2| Arabidopsis thaliana hydrolase, hydrolyzin... 62 6e-021
gb|AY101518.1| Arabidopsis thaliana AT4g02290/T2H3_5 mRNA, ... 62 6e-021
emb|AX412624.1| Sequence 388 from Patent WO0222675 62 6e-021
emb|AX506659.1| Sequence 1354 from Patent WO0216655 62 6e-021
emb|CQ805928.1| Sequence 2339 from Patent WO2004035798 62 6e-021
gb|AV555816.1|AV555816 AV555816 Arabidopsis thaliana green ... 62 6e-021
ref|NM_100159.2| Arabidopsis thaliana ATCEL2; hydrolase, hy... 62 9e-021
gb|AF034573.1|AF034573 Arabidopsis thaliana endo-1,4-beta g... 62 9e-021
>gb|AF074375.1|AF074375 Arabidopsis thaliana cellulase (DEC) mRNA, complete cds
Length = 2179
Score = 226 bits (487), Expect = 1e-057
Identities = 91/141 (64%), Positives = 104/141 (73%)
Frame = -2 / +1
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P Y+ VL Q+DYI KNP KMSY VGF KYP+ HHRGASIP N V
Sbjct: 1456 PGWYCGPNFYSTSVLRDFARSQIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKV 1635
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALI 473
KY CKGG+KWRD+KK NPN + GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+
Sbjct: 1636 KYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALV 1815
Query: 472 SISDIKTGRFGIDKNTIFSAI 410
++S + IDKNTIFSA+
Sbjct: 1816 ALSGEEEATGKIDKNTIFSAV 1878
>gb|U37702.1|ATU37702 Arabidopsis thaliana cellulase (OR16pep) mRNA, complete cds
Length = 2257
Score = 226 bits (487), Expect = 1e-057
Identities = 91/141 (64%), Positives = 104/141 (73%)
Frame = -2 / +2
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P Y+ VL Q+DYI KNP KMSY VGF KYP+ HHRGASIP N V
Sbjct: 1463 PGWYCGPNFYSTSVLRDFARSQIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKV 1642
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALI 473
KY CKGG+KWRD+KK NPN + GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+
Sbjct: 1643 KYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALV 1822
Query: 472 SISDIKTGRFGIDKNTIFSAI 410
++S + IDKNTIFSA+
Sbjct: 1823 ALSGEEEATGKIDKNTIFSAV 1885
>emb|A83259.1| Sequence 1 from Patent WO9850568
Length = 2257
Score = 226 bits (487), Expect = 1e-057
Identities = 91/141 (64%), Positives = 104/141 (73%)
Frame = -2 / +2
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P Y+ VL Q+DYI KNP KMSY VGF KYP+ HHRGASIP N V
Sbjct: 1463 PGWYCGPNFYSTSVLRDFARSQIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKV 1642
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALI 473
KY CKGG+KWRD+KK NPN + GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+
Sbjct: 1643 KYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALV 1822
Query: 472 SISDIKTGRFGIDKNTIFSAI 410
++S + IDKNTIFSA+
Sbjct: 1823 ALSGEEEATGKIDKNTIFSAV 1885
>gb|AY037218.1| Arabidopsis thaliana AT5g49720/K2I5_8 mRNA, complete cds
Length = 2307
Score = 226 bits (487), Expect = 1e-057
Identities = 91/141 (64%), Positives = 104/141 (73%)
Frame = -2 / +1
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P Y+ VL Q+DYI KNP KMSY VGF KYP+ HHRGASIP N V
Sbjct: 1513 PGWYCGPNFYSTSVLRDFARSQIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKV 1692
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALI 473
KY CKGG+KWRD+KK NPN + GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+
Sbjct: 1693 KYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALV 1872
Query: 472 SISDIKTGRFGIDKNTIFSAI 410
++S + IDKNTIFSA+
Sbjct: 1873 ALSGEEEATGKIDKNTIFSAV 1935
>dbj|E64634.1| Method for modifying plant cell wall component
Length = 2257
Score = 226 bits (487), Expect = 1e-057
Identities = 91/141 (64%), Positives = 104/141 (73%)
Frame = -2 / +2
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P Y+ VL Q+DYI KNP KMSY VGF KYP+ HHRGASIP N V
Sbjct: 1463 PGWYCGPNFYSTSVLRDFARSQIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKV 1642
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALI 473
KY CKGG+KWRD+KK NPN + GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+
Sbjct: 1643 KYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALV 1822
Query: 472 SISDIKTGRFGIDKNTIFSAI 410
++S + IDKNTIFSA+
Sbjct: 1823 ALSGEEEATGKIDKNTIFSAV 1885
>gb|BT002221.1| Arabidopsis thaliana At5g49720/K2I5_8 mRNA, complete cds
Length = 1866
Score = 226 bits (487), Expect = 1e-057
Identities = 91/141 (64%), Positives = 104/141 (73%)
Frame = -2 / +1
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P Y+ VL Q+DYI KNP KMSY VGF KYP+ HHRGASIP N V
Sbjct: 1393 PGWYCGPNFYSTSVLRDFARSQIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKV 1572
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALI 473
KY CKGG+KWRD+KK NPN + GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+
Sbjct: 1573 KYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALV 1752
Query: 472 SISDIKTGRFGIDKNTIFSAI 410
++S + IDKNTIFSA+
Sbjct: 1753 ALSGEEEATGKIDKNTIFSAV 1815
>gb|AY086165.1| Arabidopsis thaliana clone 21922 mRNA, complete sequence
Length = 2303
Score = 226 bits (487), Expect = 1e-057
Identities = 91/141 (64%), Positives = 104/141 (73%)
Frame = -2 / +1
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P Y+ VL Q+DYI KNP KMSY VGF KYP+ HHRGASIP N V
Sbjct: 1513 PGWYCGPNFYSTSVLRDFARSQIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKV 1692
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALI 473
KY CKGG+KWRD+KK NPN + GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+
Sbjct: 1693 KYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALV 1872
Query: 472 SISDIKTGRFGIDKNTIFSAI 410
++S + IDKNTIFSA+
Sbjct: 1873 ALSGEEEATGKIDKNTIFSAV 1935
>dbj|AK222193.1| Arabidopsis thaliana mRNA for cellulase homolog OR16pep precursor,
partial cds, clone: RAFL24-21-F09
Length = 1102
Score = 226 bits (487), Expect = 1e-057
Identities = 91/141 (64%), Positives = 104/141 (73%)
Frame = -2 / +2
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P Y+ VL Q+DYI KNP KMSY VGF KYP+ HHRGASIP N V
Sbjct: 299 PGWYCGPNFYSTSVLRDFARSQIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKV 478
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALI 473
KY CKGG+KWRD+KK NPN + GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+
Sbjct: 479 KYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALV 658
Query: 472 SISDIKTGRFGIDKNTIFSAI 410
++S + IDKNTIFSA+
Sbjct: 659 ALSGEEEATGKIDKNTIFSAV 721
>ref|NM_124350.2| Arabidopsis thaliana KOR1 (KORRIGAN); hydrolase, hydrolyzing
O-glycosyl compounds AT5G49720 (KOR1) mRNA, complete cds
Length = 2360
Score = 226 bits (487), Expect = 1e-057
Identities = 91/141 (64%), Positives = 104/141 (73%)
Frame = -2 / +1
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P Y+ VL Q+DYI KNP KMSY VGF KYP+ HHRGASIP N V
Sbjct: 1513 PGWYCGPNFYSTSVLRDFARSQIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKV 1692
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALI 473
KY CKGG+KWRD+KK NPN + GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+
Sbjct: 1693 KYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALV 1872
Query: 472 SISDIKTGRFGIDKNTIFSAI 410
++S + IDKNTIFSA+
Sbjct: 1873 ALSGEEEATGKIDKNTIFSAV 1935
>gb|AF074092.1|AF074092 Arabidopsis thaliana cellulase (DEC) gene, complete cds
Length = 4033
Score = 215 bits (463), Expect = 2e-054
Identities = 85/120 (70%), Positives = 97/120 (80%)
Frame = -2 / +2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI KNP KMSY VGF KYP+ HHRGASIP N VKY CKGG+KWRD+KK NPN +
Sbjct: 2981 QIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTI 3160
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 410
GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+++S + IDKNTIFSA+
Sbjct: 3161 EGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALVALSGEEEATGKIDKNTIFSAV 3340
>gb|AF073875.1|AF073875 Arabidopsis thaliana endo-1,4-beta-D-glucanase KORRIGAN (KOR) gene,
KOR-1 allele, complete cds
Length = 2873
Score = 215 bits (463), Expect = 2e-054
Identities = 85/120 (70%), Positives = 97/120 (80%)
Frame = -2 / +3
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI KNP KMSY VGF KYP+ HHRGASIP N VKY CKGG+KWRD+KK NPN +
Sbjct: 2142 QIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTI 2321
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 410
GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+++S + IDKNTIFSA+
Sbjct: 2322 EGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALVALSGEEEATGKIDKNTIFSAV 2501
>dbj|E64635.1| Method for modifying plant cell wall component
Length = 12319
Score = 215 bits (463), Expect = 2e-054
Identities = 85/120 (70%), Positives = 97/120 (80%)
Frame = -2 / +1
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI KNP KMSY VGF KYP+ HHRGASIP N VKY CKGG+KWRD+KK NPN +
Sbjct: 5440 QIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTI 5619
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 410
GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+++S + IDKNTIFSA+
Sbjct: 5620 EGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALVALSGEEEATGKIDKNTIFSAV 5799
>dbj|AB025613.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2I5
Length = 71807
Score = 215 bits (463), Expect = 2e-054
Identities = 85/120 (70%), Positives = 97/120 (80%)
Frame = -2 / -1
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI KNP KMSY VGF KYP+ HHRGASIP N VKY CKGG+KWRD+KK NPN +
Sbjct: 35180 QIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTI 35001
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 410
GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+++S + IDKNTIFSA+
Sbjct: 35000 EGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALVALSGEEEATGKIDKNTIFSAV 34821
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 215 bits (463), Expect = 2e-054
Identities = 85/120 (70%), Positives = 97/120 (80%)
Frame = -2 / -3
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI KNP KMSY VGF KYP+ HHRGASIP N VKY CKGG+KWRD+KK NPN +
Sbjct: 18198302 QIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTI 18198123
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 410
GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+++S + IDKNTIFSA+
Sbjct: 18198122 EGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALVALSGEEEATGKIDKNTIFSAV 18197943
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 215 bits (463), Expect = 2e-054
Identities = 85/120 (70%), Positives = 97/120 (80%)
Frame = -2 / -1
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI KNP KMSY VGF KYP+ HHRGASIP N VKY CKGG+KWRD+KK NPN +
Sbjct: 20215401 QIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTI 20215222
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 410
GAMVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+++S + IDKNTIFSA+
Sbjct: 20215221 EGAMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALVALSGEEEATGKIDKNTIFSAV 20215042
>gb|CW800642.1|CW800642 WiscDsLox329F10 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 817
Score = 113 bits (241), Expect(2) = 2e-048
Identities = 42/58 (72%), Positives = 46/58 (79%)
Frame = -2 / +2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPN 596
Q+DYI KNP KMSY VGF KYP+ HHRGASIP N VKY CKGG+KWRD+KK NPN
Sbjct: 188 QIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPN 361
Score = 101 bits (216), Expect(2) = 2e-048
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = -2 / +3
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 410
V MVAGPD+RDGY+DVR NYNYTEPTLA NAGLVAAL+++S + IDKNTIFSA+
Sbjct: 369 VXTMVAGPDKRDGYRDVRMNYNYTEPTLAGNAGLVAALVALSGEEEAXGKIDKNTIFSAV 548
>gb|AV782845.1|AV782845 AV782845 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-02-G06 3',
mRNA sequence
Length = 693
Score = 193 bits (415), Expect = 8e-048
Identities = 76/107 (71%), Positives = 87/107 (81%)
Frame = -2 / -1
Query: 730 SYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDG 551
SY VGF KYP+ HHRGASIP N VKY CKGG+KWRD+KK NPN + GAMVAGPD+RDG
Sbjct: 693 SYVVGFGTKYPRHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDG 514
Query: 550 YKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 410
Y+DVR NYNYTEPTLA NAGLVAAL+++S + IDKNTIFSA+
Sbjct: 513 YRDVRMNYNYTEPTLAGNAGLVAALVALSGEEEATGKIDKNTIFSAV 373
>gb|CK119494.1|CK119494 212c03.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011C03212
5-PRIME, mRNA sequence
Length = 772
Score = 187 bits (402), Expect = 5e-046
Identities = 73/112 (65%), Positives = 81/112 (72%)
Frame = -2 / +3
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P Y+ VL Q+DYI KNP KMSY VGF KYP+ HHRGASIP N V
Sbjct: 435 PGWYCGPNFYSTSVLRDFARSQIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKV 614
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAAN 497
KY CKGG+KWRD+KK NPN + GAMVAGPD+RDGY+DVR NYNYTE TLA N
Sbjct: 615 KYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDGYRDVRMNYNYTETTLAGN 770
>ref|NM_118559.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT4G24260 mRNA, complete cds
Length = 1863
Score = 116 bits (248), Expect(3) = 2e-044
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = -2 / +1
Query: 655 VKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
+K C GG+KW+ +KK NPN + GAMVAGPD+ DG+ D+RTNYNYTEPTLA NAGLVAAL
Sbjct: 1570 MKETCTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTEPTLAGNAGLVAAL 1749
Query: 475 ISISDIK 455
+++S K
Sbjct: 1750 VALSGEK 1770
Score = 78.0 bits (164), Expect(3) = 2e-044
Identities = 31/58 (53%), Positives = 35/58 (60%)
Frame = -2 / +1
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHN 659
P Y P YT L Q+DYI KNP KMSY VG+ +YPK+ HHRGASIP N
Sbjct: 1396 PGWYCGPNFYTTEFLRNFSRSQIDYILGKNPRKMSYVVGYGQRYPKQVHHRGASIPKN 1569
Score = 25.8 bits (50), Expect(3) = 2e-044
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +1
Query: 442 GIDKNTIFSAI 410
GIDKNT+FSA+
Sbjct: 1780 GIDKNTMFSAV 1812
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 116 bits (248), Expect(3) = 2e-041
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = -2 / -2
Query: 655 VKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
+K C GG+KW+ +KK NPN + GAMVAGPD+ DG+ D+RTNYNYTEPTLA NAGLVAAL
Sbjct: 8490936 MKETCTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTEPTLAGNAGLVAAL 8490757
Query: 475 ISISDIK 455
+++S K
Sbjct: 8490756 VALSGEK 8490736
Score = 67.5 bits (141), Expect(3) = 2e-041
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -2 / -2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHN 659
Q+DYI KNP KMSY VG+ +YPK+ HHRGASIP N
Sbjct: 8491047 QIDYILGKNPRKMSYVVGYGQRYPKQVHHRGASIPKN 8490937
Score = 67.0 bits (140), Expect(2) = 8e-024
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -2 / -1
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIP 665
Q+DYI NPLKMSY VGF KYP +PHHRG+S+P
Sbjct: 2055748 QVDYILGNNPLKMSYMVGFGTKYPTQPHHRGSSLP 2055644
Score = 66.1 bits (138), Expect(2) = 1e-023
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = -2 / -3
Query: 673 SIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANA 494
SI K C GGY + ++ NPN+ +GA+V GP+ D Y D +++Y++ EPT NA
Sbjct: 8206628 SIQSKPEKIDCNGGYSYYNSDTPNPNVHIGAIVGGPNSSDQYSDKKSDYSHAEPTTYINA 8206449
Query: 493 GLVAALISI 467
+ + ++
Sbjct: 8206448 AFIGPVAAL 8206422
Score = 66.1 bits (138), Expect(2) = 1e-023
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -2 / -3
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIP 665
Q+DYI NP+KMSY VGF KYP +PHHRG+S+P
Sbjct: 8206733 QVDYILGNNPMKMSYMVGFGTKYPTQPHHRGSSLP 8206629
Score = 65.7 bits (137), Expect(2) = 8e-024
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = -2 / -1
Query: 673 SIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANA 494
SI K C GG+ + + NPN+ GA+V GP+ D Y D RT+Y++ EPT NA
Sbjct: 2055643 SIQSKPEKIDCNGGFSYYNFDTPNPNVHTGAIVGGPNSSDQYSDKRTDYSHAEPTTYINA 2055464
Query: 493 GLVAALISI 467
+ ++ ++
Sbjct: 2055463 AFIGSVAAL 2055437
Score = 25.8 bits (50), Expect(3) = 2e-041
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -2
Query: 442 GIDKNTIFSAI 410
GIDKNT+FSA+
Sbjct: 8490726 GIDKNTMFSAV 8490694
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61
Length = 198402
Score = 116 bits (248), Expect(3) = 2e-041
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = -2 / -2
Query: 655 VKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
+K C GG+KW+ +KK NPN + GAMVAGPD+ DG+ D+RTNYNYTEPTLA NAGLVAAL
Sbjct: 45872 MKETCTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTEPTLAGNAGLVAAL 45693
Query: 475 ISISDIK 455
+++S K
Sbjct: 45692 VALSGEK 45672
Score = 67.5 bits (141), Expect(3) = 2e-041
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -2 / -2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHN 659
Q+DYI KNP KMSY VG+ +YPK+ HHRGASIP N
Sbjct: 45983 QIDYILGKNPRKMSYVVGYGQRYPKQVHHRGASIPKN 45873
Score = 25.8 bits (50), Expect(3) = 2e-041
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -2
Query: 442 GIDKNTIFSAI 410
GIDKNT+FSA+
Sbjct: 45662 GIDKNTMFSAV 45630
>gb|AC005861.4|AC005861 Arabidopsis thaliana clone F23B24, *** SEQUENCING IN PROGRESS ***, 6
unordered pieces
Length = 112369
Score = 116 bits (248), Expect(3) = 2e-041
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = -2 / -1
Query: 655 VKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
+K C GG+KW+ +KK NPN + GAMVAGPD+ DG+ D+RTNYNYTEPTLA NAGLVAAL
Sbjct: 35329 MKETCTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTEPTLAGNAGLVAAL 35150
Query: 475 ISISDIK 455
+++S K
Sbjct: 35149 VALSGEK 35129
Score = 67.5 bits (141), Expect(3) = 2e-041
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -2 / -1
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHN 659
Q+DYI KNP KMSY VG+ +YPK+ HHRGASIP N
Sbjct: 35440 QIDYILGKNPRKMSYVVGYGQRYPKQVHHRGASIPKN 35330
Score = 25.8 bits (50), Expect(3) = 2e-041
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -1
Query: 442 GIDKNTIFSAI 410
GIDKNT+FSA+
Sbjct: 35119 GIDKNTMFSAV 35087
>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project)
Length = 108459
Score = 116 bits (248), Expect(3) = 2e-041
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = -2 / -3
Query: 655 VKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
+K C GG+KW+ +KK NPN + GAMVAGPD+ DG+ D+RTNYNYTEPTLA NAGLVAAL
Sbjct: 29215 MKETCTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTEPTLAGNAGLVAAL 29036
Query: 475 ISISDIK 455
+++S K
Sbjct: 29035 VALSGEK 29015
Score = 67.5 bits (141), Expect(3) = 2e-041
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -2 / -3
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHN 659
Q+DYI KNP KMSY VG+ +YPK+ HHRGASIP N
Sbjct: 29326 QIDYILGKNPRKMSYVVGYGQRYPKQVHHRGASIPKN 29216
Score = 25.8 bits (50), Expect(3) = 2e-041
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -3
Query: 442 GIDKNTIFSAI 410
GIDKNT+FSA+
Sbjct: 29005 GIDKNTMFSAV 28973
>gb|CW801060.1|CW801060 WiscDsLox293-296invH12 Arabidopsis thaliana T-DNA insertion
flanking sequences Arabidopsis thaliana genomic, DNA
sequence
Length = 761
Score = 116 bits (248), Expect(3) = 3e-041
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = -2 / -3
Query: 655 VKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
+K C GG+KW+ +KK NPN + GAMVAGPD+ DG+ D+RTNYNYTEPTLA NAGLVAAL
Sbjct: 471 MKETCTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTEPTLAGNAGLVAAL 292
Query: 475 ISISDIK 455
+++S K
Sbjct: 291 VALSGEK 271
Score = 67.5 bits (141), Expect(3) = 3e-041
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -2 / -3
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHN 659
Q+DYI KNP KMSY VG+ +YPK+ HHRGASIP N
Sbjct: 582 QIDYILGKNPRKMSYVVGYGQRYPKQVHHRGASIPKN 472
Score = 25.8 bits (50), Expect(3) = 3e-041
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -3
Query: 442 GIDKNTIFSAI 410
GIDKNT+FSA+
Sbjct: 261 GIDKNTMFSAV 229
>gb|BH254251.1|BH254251 SALK_016250 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_016250, DNA sequence
Length = 477
Score = 116 bits (248), Expect(3) = 3e-041
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = -2 / -3
Query: 655 VKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
+K C GG+KW+ +KK NPN + GAMVAGPD+ DG+ D+RTNYNYTEPTLA NAGLVAAL
Sbjct: 280 MKETCTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTEPTLAGNAGLVAAL 101
Query: 475 ISISDIK 455
+++S K
Sbjct: 100 VALSGEK 80
Score = 67.5 bits (141), Expect(3) = 3e-041
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -2 / -3
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHN 659
Q+DYI KNP KMSY VG+ +YPK+ HHRGASIP N
Sbjct: 391 QIDYILGKNPRKMSYVVGYGQRYPKQVHHRGASIPKN 281
Score = 25.8 bits (50), Expect(3) = 3e-041
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -3
Query: 442 GIDKNTIFSAI 410
GIDKNT+FSA+
Sbjct: 70 GIDKNTMFSAV 38
>emb|AX651256.1| Sequence 40 from Patent WO03000898
Length = 1872
Score = 159 bits (341), Expect = 1e-037
Identities = 64/123 (52%), Positives = 83/123 (67%)
Frame = -2 / +1
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P VL Q+DYI NPLKMSY VGF K+P+R HHRGA+IP++
Sbjct: 1405 PGWYCGPTFVENHVLKDFAQSQIDYILGDNPLKMSYVVGFGKKFPRRVHHRGATIPNDKK 1584
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALI 473
+ C+ G K+RDTK NPN + GAMV GP++ D + D+R NYN +EPTL+ NAGLVAAL+
Sbjct: 1585 RRSCREGLKYRDTKNPNPNNITGAMVGGPNKFDEFHDLRNNYNASEPTLSGNAGLVAALV 1764
Query: 472 SIS 464
S++
Sbjct: 1765 SLT 1773
>ref|NM_105234.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT1G65610 mRNA, complete cds
Length = 2115
Score = 159 bits (341), Expect = 1e-037
Identities = 64/123 (52%), Positives = 83/123 (67%)
Frame = -2 / +1
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P VL Q+DYI NPLKMSY VGF K+P+R HHRGA+IP++
Sbjct: 1504 PGWYCGPTFVENHVLKDFAQSQIDYILGDNPLKMSYVVGFGKKFPRRVHHRGATIPNDKK 1683
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALI 473
+ C+ G K+RDTK NPN + GAMV GP++ D + D+R NYN +EPTL+ NAGLVAAL+
Sbjct: 1684 RRSCREGLKYRDTKNPNPNNITGAMVGGPNKFDEFHDLRNNYNASEPTLSGNAGLVAALV 1863
Query: 472 SIS 464
S++
Sbjct: 1864 SLT 1872
>gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 109560
Score = 153 bits (329), Expect = 6e-036
Identities = 59/102 (57%), Positives = 78/102 (76%)
Frame = -2 / -2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI NPLKMSY VGF K+P+R HHRGA+IP++ + C+ G K+RDTK NPN +
Sbjct: 71297 QIDYILGDNPLKMSYVVGFGKKFPRRVHHRGATIPNDKKRRSCREGLKYRDTKNPNPNNI 71118
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISIS 464
GAMV GP++ D + D+R NYN +EPTL+ NAGLVAAL+S++
Sbjct: 71117 TGAMVGGPNKFDEFHDLRNNYNASEPTLSGNAGLVAALVSLT 70992
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 153 bits (329), Expect = 6e-036
Identities = 59/102 (57%), Positives = 78/102 (76%)
Frame = -2 / -2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI NPLKMSY VGF K+P+R HHRGA+IP++ + C+ G K+RDTK NPN +
Sbjct: 8633542 QIDYILGDNPLKMSYVVGFGKKFPRRVHHRGATIPNDKKRRSCREGLKYRDTKNPNPNNI 8633363
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISIS 464
GAMV GP++ D + D+R NYN +EPTL+ NAGLVAAL+S++
Sbjct: 8633362 TGAMVGGPNKFDEFHDLRNNYNASEPTLSGNAGLVAALVSLT 8633237
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = -2 / -1
Query: 646 GCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
GC GG++ T+ NPNIL GA+V GP++ DGY D R +Y++ EP NA V L
Sbjct: 11141504 GCNGGFQSFYTQNPNPNILTGAIVGGPNQNDGYPDQRDDYSHAEPATYINAAFVGPL 11141334
Score = 61.1 bits (127), Expect(2) = 3e-023
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = -2 / -1
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVK 650
Q+DYI NP+KMSY VGF + +PKR HHR +S+P + ++
Sbjct: 11141636 QVDYILGDNPIKMSYMVGFSSNFPKRIHHRASSLPSHALR 11141517
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 153 bits (329), Expect = 6e-036
Identities = 59/102 (57%), Positives = 78/102 (76%)
Frame = -2 / -2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI NPLKMSY VGF K+P+R HHRGA+IP++ + C+ G K+RDTK NPN +
Sbjct: 24395890 QIDYILGDNPLKMSYVVGFGKKFPRRVHHRGATIPNDKKRRSCREGLKYRDTKNPNPNNI 24395711
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISIS 464
GAMV GP++ D + D+R NYN +EPTL+ NAGLVAAL+S++
Sbjct: 24395710 TGAMVGGPNKFDEFHDLRNNYNASEPTLSGNAGLVAALVSLT 24395585
>gb|CK120241.1|CK120241 208b21.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B21208
5-PRIME, mRNA sequence
Length = 758
Score = 128 bits (274), Expect = 2e-028
Identities = 50/84 (59%), Positives = 56/84 (66%)
Frame = -2 / +3
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P Y+ VL Q+DYI KNP KMSY VGF KYP+ HHRGASIP N V
Sbjct: 507 PGWYCGPNFYSTSVLRDFARSQIDYILGKNPRKMSYVVGFGTKYPRHVHHRGASIPKNKV 686
Query: 652 KYGCKGGYKWRDTKKANPNILVGA 581
KY CKGG+KWRD+KK NPN + GA
Sbjct: 687 KYNCKGGWKWRDSKKPNPNTIEGA 758
>ref|NM_179018.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT4G09740 mRNA, complete cds
Length = 1437
Score = 70.7 bits (148), Expect(2) = 7e-025
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = -2 / +1
Query: 805 YTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIP 665
+T+ + Q+DYI NPLKMSY VGF KYP +PHHRG+S+P
Sbjct: 1075 FTVSQIRNFAKSQVDYILGNNPLKMSYMVGFGTKYPTQPHHRGSSLP 1215
Score = 65.7 bits (137), Expect(2) = 7e-025
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = -2 / +1
Query: 673 SIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANA 494
SI K C GG+ + + NPN+ GA+V GP+ D Y D RT+Y++ EPT NA
Sbjct: 1216 SIQSKPEKIDCNGGFSYYNFDTPNPNVHTGAIVGGPNSSDQYSDKRTDYSHAEPTTYINA 1395
Query: 493 GLVAALISI 467
+ ++ ++
Sbjct: 1396 AFIGSVAAL 1422
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 116 bits (248), Expect = 9e-025
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = -2 / -2
Query: 655 VKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
+K C GG+KW+ +KK NPN + GAMVAGPD+ DG+ D+RTNYNYTEPTLA NAGLVAAL
Sbjct: 12578174 MKETCTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTEPTLAGNAGLVAAL 12577995
Query: 475 ISISDIK 455
+++S K
Sbjct: 12577994 VALSGEK 12577974
>ref|NM_118487.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT4G23560 mRNA, complete cds
Length = 1741
Score = 69.8 bits (146), Expect(2) = 1e-024
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = -2 / +1
Query: 805 YTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIP 665
+T+ + Q+DYI NP+KMSY VGF KYP +PHHRG+S+P
Sbjct: 1075 FTVSQIRNFAKSQVDYILGNNPMKMSYMVGFGTKYPTQPHHRGSSLP 1215
Score = 66.1 bits (138), Expect(2) = 1e-024
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = -2 / +1
Query: 673 SIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANA 494
SI K C GGY + ++ NPN+ +GA+V GP+ D Y D +++Y++ EPT NA
Sbjct: 1216 SIQSKPEKIDCNGGYSYYNSDTPNPNVHIGAIVGGPNSSDQYSDKKSDYSHAEPTTYINA 1395
Query: 493 GLVAALISI 467
+ + ++
Sbjct: 1396 AFIGPVAAL 1422
>emb|BX816994.1|CNS0ADD7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH7ZF09 of Hormone Treated Callus of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1585
Score = 69.3 bits (145), Expect(2) = 1e-024
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = -2 / +2
Query: 646 GCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
GC GG++ T+ NPNIL GA+V GP++ DGY D R +Y++ EP NA V L
Sbjct: 1250 GCNGGFQSF*TQNPNPNILTGAIVGGPNQNDGYPDQRDDYSHAEPATYINAAFVGPL 1420
Score = 66.1 bits (138), Expect(2) = 1e-024
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = -2 / +2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVK 650
Q+DYI NP+KMSY VGF + +PKR HHR +S+P NG++
Sbjct: 1118 QVDYILGDNPIKMSYMVGFSSNFPKRIHHRASSLPSNGLR 1237
>emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 27
Length = 197394
Score = 67.0 bits (140), Expect(2) = 8e-024
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -2 / -2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIP 665
Q+DYI NPLKMSY VGF KYP +PHHRG+S+P
Sbjct: 160649 QVDYILGNNPLKMSYMVGFGTKYPTQPHHRGSSLP 160545
Score = 65.7 bits (137), Expect(2) = 8e-024
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = -2 / -2
Query: 673 SIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANA 494
SI K C GG+ + + NPN+ GA+V GP+ D Y D RT+Y++ EPT NA
Sbjct: 160544 SIQSKPEKIDCNGGFSYYNFDTPNPNVHTGAIVGGPNSSDQYSDKRTDYSHAEPTTYINA 160365
Query: 493 GLVAALISI 467
+ ++ ++
Sbjct: 160364 AFIGSVAAL 160338
>emb|AL049482.1|ATF17A8 Arabidopsis thaliana DNA chromosome 4, BAC clone F17A8 (ESSA project)
Length = 128071
Score = 67.0 bits (140), Expect(2) = 8e-024
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -2 / -3
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIP 665
Q+DYI NPLKMSY VGF KYP +PHHRG+S+P
Sbjct: 41348 QVDYILGNNPLKMSYMVGFGTKYPTQPHHRGSSLP 41244
Score = 65.7 bits (137), Expect(2) = 8e-024
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = -2 / -3
Query: 673 SIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANA 494
SI K C GG+ + + NPN+ GA+V GP+ D Y D RT+Y++ EPT NA
Sbjct: 41243 SIQSKPEKIDCNGGFSYYNFDTPNPNVHTGAIVGGPNSSDQYSDKRTDYSHAEPTTYINA 41064
Query: 493 GLVAALISI 467
+ ++ ++
Sbjct: 41063 AFIGSVAAL 41037
>emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 59
Length = 199199
Score = 66.1 bits (138), Expect(2) = 1e-023
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = -2 / -1
Query: 673 SIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANA 494
SI K C GGY + ++ NPN+ +GA+V GP+ D Y D +++Y++ EPT NA
Sbjct: 147440 SIQSKPEKIDCNGGYSYYNSDTPNPNVHIGAIVGGPNSSDQYSDKKSDYSHAEPTTYINA 147261
Query: 493 GLVAALISI 467
+ + ++
Sbjct: 147260 AFIGPVAAL 147234
Score = 66.1 bits (138), Expect(2) = 1e-023
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -2 / -1
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIP 665
Q+DYI NP+KMSY VGF KYP +PHHRG+S+P
Sbjct: 147545 QVDYILGNNPMKMSYMVGFGTKYPTQPHHRGSSLP 147441
>emb|AL035394.1|ATF9D16 Arabidopsis thaliana DNA chromosome 4, BAC clone F9D16 (ESSAII
project)
Length = 119430
Score = 66.1 bits (138), Expect(2) = 1e-023
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = -2 / -3
Query: 673 SIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANA 494
SI K C GGY + ++ NPN+ +GA+V GP+ D Y D +++Y++ EPT NA
Sbjct: 11650 SIQSKPEKIDCNGGYSYYNSDTPNPNVHIGAIVGGPNSSDQYSDKKSDYSHAEPTTYINA 11471
Query: 493 GLVAALISI 467
+ + ++
Sbjct: 11470 AFIGPVAAL 11444
Score = 66.1 bits (138), Expect(2) = 1e-023
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -2 / -3
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIP 665
Q+DYI NP+KMSY VGF KYP +PHHRG+S+P
Sbjct: 11755 QVDYILGNNPMKMSYMVGFGTKYPTQPHHRGSSLP 11651
>gb|AC016162.5|AC016162 Arabidopsis thaliana chromosome 1 BAC F3I17 genomic sequence, complete
sequence
Length = 107579
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = -2 / +3
Query: 646 GCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
GC GG++ T+ NPNIL GA+V GP++ DGY D R +Y++ EP NA V L
Sbjct: 42675 GCNGGFQSFYTQNPNPNILTGAIVGGPNQNDGYPDQRDDYSHAEPATYINAAFVGPL 42845
Score = 61.1 bits (127), Expect(2) = 3e-023
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = -2 / +3
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVK 650
Q+DYI NP+KMSY VGF + +PKR HHR +S+P + ++
Sbjct: 42543 QVDYILGDNPIKMSYMVGFSSNFPKRIHHRASSLPSHALR 42662
>gb|AC016163.6|AC016163 Arabidopsis thaliana chromosome 1 BAC F26A9 genomic sequence, complete
sequence
Length = 89653
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = -2 / +2
Query: 646 GCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
GC GG++ T+ NPNIL GA+V GP++ DGY D R +Y++ EP NA V L
Sbjct: 75884 GCNGGFQSFYTQNPNPNILTGAIVGGPNQNDGYPDQRDDYSHAEPATYINAAFVGPL 76054
Score = 61.1 bits (127), Expect(2) = 3e-023
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = -2 / +2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVK 650
Q+DYI NP+KMSY VGF + +PKR HHR +S+P + ++
Sbjct: 75752 QVDYILGDNPIKMSYMVGFSSNFPKRIHHRASSLPSHALR 75871
>gb|AY086043.1| Arabidopsis thaliana clone 20797 mRNA, complete sequence
Length = 1700
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = -2 / +2
Query: 646 GCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
GC GG++ T+ NPNIL GA+V GP++ DGY D R +Y++ EP NA V L
Sbjct: 1295 GCNGGFQSFYTQNPNPNILTGAIVGGPNQNDGYPDQRDDYSHAEPATYINAAFVGPL 1465
Score = 61.1 bits (127), Expect(2) = 3e-023
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = -2 / +2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVK 650
Q+DYI NP+KMSY VGF + +PKR HHR +S+P + ++
Sbjct: 1163 QVDYILGDNPIKMSYMVGFSSNFPKRIHHRASSLPSHALR 1282
>ref|NM_105807.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT1G71380 mRNA, complete cds
Length = 1700
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = -2 / +2
Query: 646 GCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
GC GG++ T+ NPNIL GA+V GP++ DGY D R +Y++ EP NA V L
Sbjct: 1295 GCNGGFQSFYTQNPNPNILTGAIVGGPNQNDGYPDQRDDYSHAEPATYINAAFVGPL 1465
Score = 61.1 bits (127), Expect(2) = 3e-023
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = -2 / +2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVK 650
Q+DYI NP+KMSY VGF + +PKR HHR +S+P + ++
Sbjct: 1163 QVDYILGDNPIKMSYMVGFSSNFPKRIHHRASSLPSHALR 1282
>emb|BX816524.1|CNS0AAUM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH53ZG08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1593
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = -2 / +1
Query: 646 GCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
GC GG++ T+ NPNIL GA+V GP++ DGY D R +Y++ EP NA V L
Sbjct: 1264 GCNGGFQSFYTQNPNPNILTGAIVGGPNQNDGYPDQRDDYSHAEPATYINAAFVGPL 1434
Score = 61.1 bits (127), Expect(2) = 3e-023
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = -2 / +1
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVK 650
Q+DYI NP+KMSY VGF + +PKR HHR +S+P + ++
Sbjct: 1132 QVDYILGDNPIKMSYMVGFSSNFPKRIHHRASSLPSHALR 1251
>gb|AI993884.1|AI993884 701515303 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701515303, mRNA sequence
Length = 597
Score = 66.1 bits (138), Expect(2) = 3e-023
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = -2 / +1
Query: 673 SIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANA 494
SI K C GGY + ++ NPN+ +GA+V GP+ D Y D +++Y++ EPT NA
Sbjct: 112 SIQSKPEKIDCNGGYSYYNSDTPNPNVHIGAIVGGPNSSDQYSDKKSDYSHAEPTTYINA 291
Query: 493 GLVAALISI 467
+ + ++
Sbjct: 292 AFIGPVAAL 318
Score = 64.8 bits (135), Expect(2) = 3e-023
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = -2 / +1
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIP 665
++DYI NP+KMSY VGF KYP +PHHRG+S+P
Sbjct: 7 EVDYILGNNPMKMSYMVGFGTKYPTQPHHRGSSLP 111
>gb|T76139.1|T76139 10917 Lambda-PRL2 Arabidopsis thaliana cDNA clone 145P7T7, mRNA
sequence
Length = 486
Score = 66.1 bits (138), Expect(2) = 4e-023
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -2 / +1
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIP 665
Q+DYI NP+KMSY VGF KYP +PHHRG+S+P
Sbjct: 7 QVDYILGNNPMKMSYMVGFGTKYPTQPHHRGSSLP 111
Score = 64.3 bits (134), Expect(2) = 4e-023
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = -2 / +1
Query: 673 SIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANA 494
SI K C GGY + ++ NPN+ +GA+V GP+ D Y D +++Y++ EPT N
Sbjct: 112 SIQSKPEKIDCNGGYSYYNSDTPNPNVHIGAIVGGPNSSDQYSDKKSDYSHAEPTTYING 291
Query: 493 GLVAALISIS 464
+ + +++
Sbjct: 292 XFIGPVAALN 321
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 64.8 bits (135), Expect(2) = 9e-023
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = -2 / +3
Query: 646 GCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
GC GG++ T+ NPNIL GA+V GP++ D Y D R +Y +EP NA V L
Sbjct: 8097093 GCNGGFQSFRTQNPNPNILTGAIVGGPNQNDEYPDQRDDYTRSEPATYINAAFVGPL 8097263
Score = 64.3 bits (134), Expect(2) = 9e-023
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = -2 / +3
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKG 635
Q+DY+ NP+KMSY VGF + +PKR HHRG+S+P V+ G
Sbjct: 8096961 QVDYVLGVNPMKMSYMVGFSSNFPKRIHHRGSSLPSRAVRSNSLG 8097095
>gb|AF000657.1|ATAF000657 Arabidopsis thaliana BAC F19G10, complete sequence
Length = 92948
Score = 64.8 bits (135), Expect(2) = 1e-022
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = -2 / -2
Query: 646 GCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
GC GG++ T+ NPNIL GA+V GP++ D Y D R +Y +EP NA V L
Sbjct: 73702 GCNGGFQSFRTQNPNPNILTGAIVGGPNQNDEYPDQRDDYTRSEPATYINAAFVGPL 73532
Score = 64.3 bits (134), Expect(2) = 1e-022
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = -2 / -2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKG 635
Q+DY+ NP+KMSY VGF + +PKR HHRG+S+P V+ G
Sbjct: 73834 QVDYVLGVNPMKMSYMVGFSSNFPKRIHHRGSSLPSRAVRSNSLG 73700
>gb|AY075630.1| Arabidopsis thaliana At1g22880/F19G10_16 mRNA sequence
Length = 2059
Score = 64.8 bits (135), Expect(2) = 1e-022
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = -2 / +2
Query: 646 GCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
GC GG++ T+ NPNIL GA+V GP++ D Y D R +Y +EP NA V L
Sbjct: 1838 GCNGGFQSFRTQNPNPNILTGAIVGGPNQNDEYPDQRDDYTRSEPATYINAAFVGPL 2008
Score = 64.3 bits (134), Expect(2) = 1e-022
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = -2 / +2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKG 635
Q+DY+ NP+KMSY VGF + +PKR HHRG+S+P V+ G
Sbjct: 1706 QVDYVLGVNPMKMSYMVGFSSNFPKRIHHRGSSLPSRAVRSNSLG 1840
>ref|NM_001036005.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT1G22880 transcript variant AT1G22880.2 mRNA, complete
cds
Length = 1974
Score = 64.8 bits (135), Expect(2) = 1e-022
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = -2 / +2
Query: 646 GCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
GC GG++ T+ NPNIL GA+V GP++ D Y D R +Y +EP NA V L
Sbjct: 1604 GCNGGFQSFRTQNPNPNILTGAIVGGPNQNDEYPDQRDDYTRSEPATYINAAFVGPL 1774
Score = 64.3 bits (134), Expect(2) = 1e-022
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = -2 / +2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKG 635
Q+DY+ NP+KMSY VGF + +PKR HHRG+S+P V+ G
Sbjct: 1472 QVDYVLGVNPMKMSYMVGFSSNFPKRIHHRGSSLPSRAVRSNSLG 1606
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,498,411,239
Number of Sequences: 1013581
Number of extensions: 19325740
Number of successful extensions: 127328
Number of sequences better than 1.0e-020: 80
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 55399444650
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)