TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161072.2.3
(885 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY088956.1| Arabidopsis thaliana clone 110886 mRNA, comp... 150 6e-057
emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3... 150 8e-057
gb|L33678.1|ATHPAL2 Arabidopsis thaliana (strain Columbia) ... 150 9e-057
ref|NM_115186.3| Arabidopsis thaliana PAL2; phenylalanine a... 150 9e-057
gb|AY092957.1| Arabidopsis thaliana phenylalanine ammonia-l... 150 9e-057
gb|AF367308.1| Arabidopsis thaliana AT3g53260/T4D2_190 mRNA... 150 9e-057
gb|BT000035.1| Arabidopsis thaliana phenylalanine ammonia-l... 150 9e-057
gb|AY133595.1| Arabidopsis thaliana AT3g53260/T4D2_190 mRNA... 150 9e-057
emb|AX506118.1| Sequence 813 from Patent WO0216655 150 9e-057
emb|AX651478.1| Sequence 279 from Patent WO03000898 150 9e-057
emb|CQ805396.1| Sequence 1807 from Patent WO2004035798 150 9e-057
gb|AY303129.1| Arabidopsis thaliana phenylalanine ammonia l... 150 9e-057
gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8... 146 5e-055
gb|L33677.1|ATHPAL Arabidopsis thaliana (strain Landsberg e... 146 5e-055
ref|NM_129260.2| Arabidopsis thaliana PAL1; phenylalanine a... 146 5e-055
gb|AY045919.1| Arabidopsis thaliana putative phenylalanine ... 146 5e-055
gb|BT003330.1| Arabidopsis thaliana Unknown protein mRNA, c... 146 5e-055
gb|AY079363.1| Arabidopsis thaliana putative phenylalanine ... 146 5e-055
emb|AX412245.1| Sequence 9 from Patent WO0222675 146 5e-055
emb|AX412319.1| Sequence 83 from Patent WO0222675 146 5e-055
emb|AX412320.1| Sequence 84 from Patent WO0222675 146 5e-055
emb|AX507018.1| Sequence 1713 from Patent WO0216655 146 5e-055
emb|AX651263.1| Sequence 47 from Patent WO03000898 146 5e-055
emb|CQ804940.1| Sequence 1351 from Patent WO2004035798 146 5e-055
emb|CQ805130.1| Sequence 1541 from Patent WO2004035798 146 5e-055
gb|AY303128.1| Arabidopsis thaliana phenylalanine ammonia l... 146 5e-055
dbj|AK221928.1| Arabidopsis thaliana mRNA for phenylalanine... 146 5e-055
gb|AV782312.1|AV782312 AV782312 RAFL4 Arabidopsis thaliana ... 150 1e-054
gb|AV544960.1|AV544960 AV544960 Arabidopsis thaliana roots ... 150 1e-054
emb|BX823910.1|CNS0A7V1 Arabidopsis thaliana Full-length cD... 141 3e-054
gb|AV524210.1|AV524210 AV524210 Arabidopsis thaliana aboveg... 150 3e-053
emb|BX821358.1|CNS0AA3A Arabidopsis thaliana Full-length cD... 146 6e-051
gb|BX835465.1|BX835465 BX835465 Arabidopsis thaliana Adult ... 150 6e-050
gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome II... 139 2e-049
ref|NM_111869.3| Arabidopsis thaliana ammonia ligase/ ammon... 139 2e-049
gb|AY099657.1| Arabidopsis thaliana putative phenylalanine ... 139 2e-049
gb|BT000252.1| Arabidopsis thaliana putative phenylalanine ... 139 2e-049
gb|AY303130.1| Arabidopsis thaliana phenylalanine ammonia l... 139 2e-049
gb|AV783398.1|AV783398 AV783398 RAFL5 Arabidopsis thaliana ... 146 1e-044
gb|AV544717.1|AV544717 AV544717 Arabidopsis thaliana roots ... 150 4e-044
gb|AV558603.1|AV558603 AV558603 Arabidopsis thaliana green ... 150 4e-044
gb|AV542768.1|AV542768 AV542768 Arabidopsis thaliana roots ... 139 3e-043
gb|AV559270.1|AV559270 AV559270 Arabidopsis thaliana green ... 149 8e-040
gb|AI999678.1|AI999678 701557008 A. thaliana, Columbia Col-... 139 1e-039
gb|AI996802.1|AI996802 701668476 A. thaliana, Columbia Col-... 138 1e-038
gb|BX840680.1|BX840680 BX840680 Arabidopsis thaliana Siliqu... 61 2e-037
gb|AV547686.1|AV547686 AV547686 Arabidopsis thaliana roots ... 150 4e-036
gb|AV544709.1|AV544709 AV544709 Arabidopsis thaliana roots ... 150 4e-036
gb|BP606641.1|BP606641 BP606641 RAFL16 Arabidopsis thaliana... 139 2e-035
gb|BE662969.1|BE662969 EST00113 Arabidopsis Acute Ozone For... 150 6e-035
gb|AV544318.1|AV544318 AV544318 Arabidopsis thaliana roots ... 150 6e-035
gb|AV555308.1|AV555308 AV555308 Arabidopsis thaliana green ... 150 6e-035
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 150 6e-035
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 150 6e-035
gb|AI997452.1|AI997452 701554008 A. thaliana, Columbia Col-... 148 2e-034
gb|AV797345.1|AV797345 AV797345 RAFL9 Arabidopsis thaliana ... 147 6e-034
gb|AV564149.1|AV564149 AV564149 Arabidopsis thaliana green ... 147 6e-034
gb|AV565930.1|AV565930 AV565930 Arabidopsis thaliana green ... 147 6e-034
gb|AV547892.1|AV547892 AV547892 Arabidopsis thaliana roots ... 146 1e-033
dbj|AK221124.1| Arabidopsis thaliana mRNA for phenylalanine... 146 1e-033
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 146 1e-033
gb|AV558154.1|AV558154 AV558154 Arabidopsis thaliana green ... 144 5e-033
gb|AV560700.1|AV560700 AV560700 Arabidopsis thaliana green ... 139 7e-033
gb|BP786658.1|BP786658 BP786658 RAFL7 Arabidopsis thaliana ... 143 1e-032
gb|AV797794.1|AV797794 AV797794 RAFL9 Arabidopsis thaliana ... 140 7e-032
gb|BP608663.1|BP608663 BP608663 RAFL16 Arabidopsis thaliana... 139 1e-031
gb|AV539086.1|AV539086 AV539086 Arabidopsis thaliana roots ... 138 2e-031
gb|BP636326.1|BP636326 BP636326 RAFL18 Arabidopsis thaliana... 138 2e-031
emb|AL391716.1|ATF21E1 Arabidopsis thaliana DNA chromosome ... 129 7e-031
ref|NM_120505.3| Arabidopsis thaliana PAL3 (PHENYL ALANINE ... 129 8e-031
gb|AY528562.1| Arabidopsis thaliana phenylalanine ammonia-l... 129 8e-031
gb|AV557330.1|AV557330 AV557330 Arabidopsis thaliana green ... 136 1e-030
gb|AV782023.1|AV782023 AV782023 RAFL4 Arabidopsis thaliana ... 134 4e-030
gb|BP619543.1|BP619543 BP619543 RAFL16 Arabidopsis thaliana... 134 4e-030
gb|L33679.1|ATHPAL3 Arabidopsis thaliana (strain Columbia) ... 126 7e-030
gb|AV564792.1|AV564792 AV564792 Arabidopsis thaliana green ... 133 1e-029
gb|AV542315.1|AV542315 AV542315 Arabidopsis thaliana roots ... 132 1e-029
gb|AV547233.1|AV547233 AV547233 Arabidopsis thaliana roots ... 130 5e-029
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 129 1e-028
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 129 1e-028
gb|AV558919.1|AV558919 AV558919 Arabidopsis thaliana green ... 128 2e-028
gb|BP786338.1|BP786338 BP786338 RAFL7 Arabidopsis thaliana ... 128 2e-028
gb|BP814014.1|BP814014 BP814014 RAFL19 Arabidopsis thaliana... 90 6e-028
gb|AV545374.1|AV545374 AV545374 Arabidopsis thaliana roots ... 126 9e-028
gb|AV553551.1|AV553551 AV553551 Arabidopsis thaliana roots ... 74 1e-027
gb|AV548841.1|AV548841 AV548841 Arabidopsis thaliana roots ... 125 2e-027
gb|BP597546.1|BP597546 BP597546 RAFL15 Arabidopsis thaliana... 125 2e-027
gb|AV790081.1|AV790081 AV790081 RAFL6 Arabidopsis thaliana ... 124 3e-027
gb|AV796886.1|AV796886 AV796886 RAFL9 Arabidopsis thaliana ... 124 3e-027
gb|AV797838.1|AV797838 AV797838 RAFL9 Arabidopsis thaliana ... 124 3e-027
gb|AV801904.1|AV801904 AV801904 RAFL9 Arabidopsis thaliana ... 124 3e-027
gb|AV813837.1|AV813837 AV813837 RAFL9 Arabidopsis thaliana ... 124 3e-027
gb|AV546412.1|AV546412 AV546412 Arabidopsis thaliana roots ... 124 3e-027
gb|AV559798.1|AV559798 AV559798 Arabidopsis thaliana green ... 124 3e-027
gb|AV814928.1|AV814928 AV814928 RAFL9 Arabidopsis thaliana ... 124 4e-027
gb|AV796746.1|AV796746 AV796746 RAFL9 Arabidopsis thaliana ... 122 1e-026
gb|AV820261.1|AV820261 AV820261 RAFL11 Arabidopsis thaliana... 122 1e-026
gb|AV821038.1|AV821038 AV821038 RAFL11 Arabidopsis thaliana... 122 1e-026
gb|AV810491.1|AV810491 AV810491 RAFL9 Arabidopsis thaliana ... 121 3e-026
gb|AW004366.1|AW004366 701956642 A. thaliana, mixed source ... 113 3e-026
gb|AV553022.1|AV553022 AV553022 Arabidopsis thaliana roots ... 74 4e-026
gb|AA713341.1|AA713341 32901 CD4-16 Arabidopsis thaliana cD... 121 4e-026
gb|AV797825.1|AV797825 AV797825 RAFL9 Arabidopsis thaliana ... 121 4e-026
gb|AV803304.1|AV803304 AV803304 RAFL9 Arabidopsis thaliana ... 121 4e-026
gb|AV814261.1|AV814261 AV814261 RAFL9 Arabidopsis thaliana ... 121 4e-026
gb|AV814576.1|AV814576 AV814576 RAFL9 Arabidopsis thaliana ... 121 4e-026
gb|BP588973.1|BP588973 BP588973 RAFL15 Arabidopsis thaliana... 121 4e-026
gb|BP598055.1|BP598055 BP598055 RAFL16 Arabidopsis thaliana... 121 4e-026
gb|BP794537.1|BP794537 BP794537 RAFL7 Arabidopsis thaliana ... 121 4e-026
gb|AV786039.1|AV786039 AV786039 RAFL6 Arabidopsis thaliana ... 120 6e-026
gb|AV806160.1|AV806160 AV806160 RAFL9 Arabidopsis thaliana ... 120 6e-026
gb|BP832067.1|BP832067 BP832067 RAFL19 Arabidopsis thaliana... 117 6e-026
gb|AV820059.1|AV820059 AV820059 RAFL11 Arabidopsis thaliana... 119 1e-025
gb|AV799437.1|AV799437 AV799437 RAFL9 Arabidopsis thaliana ... 118 2e-025
gb|AV799715.1|AV799715 AV799715 RAFL9 Arabidopsis thaliana ... 118 3e-025
gb|BP814512.1|BP814512 BP814512 RAFL19 Arabidopsis thaliana... 81 3e-025
gb|BP577255.1|BP577255 BP577255 RAFL14 Arabidopsis thaliana... 117 4e-025
gb|BP612213.1|BP612213 BP612213 RAFL16 Arabidopsis thaliana... 117 4e-025
gb|AV814676.1|AV814676 AV814676 RAFL9 Arabidopsis thaliana ... 117 5e-025
gb|AV548764.1|AV548764 AV548764 Arabidopsis thaliana roots ... 116 1e-024
gb|BP604246.1|BP604246 BP604246 RAFL16 Arabidopsis thaliana... 116 1e-024
gb|BP609384.1|BP609384 BP609384 RAFL16 Arabidopsis thaliana... 116 1e-024
gb|BP780672.1|BP780672 BP780672 RAFL7 Arabidopsis thaliana ... 115 3e-024
gb|BP589483.1|BP589483 BP589483 RAFL15 Arabidopsis thaliana... 71 7e-024
gb|BP637983.1|BP637983 BP637983 RAFL19 Arabidopsis thaliana... 105 7e-024
gb|BP634703.1|BP634703 BP634703 RAFL17 Arabidopsis thaliana... 111 2e-023
gb|BP573114.1|BP573114 BP573114 RAFL14 Arabidopsis thaliana... 111 4e-023
gb|BP795043.1|BP795043 BP795043 RAFL7 Arabidopsis thaliana ... 111 4e-023
emb|CR384143.1| Arabidopsis thaliana transposon insertion S... 111 4e-023
gb|BP606244.1|BP606244 BP606244 RAFL16 Arabidopsis thaliana... 76 6e-023
gb|AV547875.1|AV547875 AV547875 Arabidopsis thaliana roots ... 110 8e-023
gb|BP570190.1|BP570190 BP570190 RAFL14 Arabidopsis thaliana... 109 2e-022
gb|AV819960.1|AV819960 AV819960 RAFL11 Arabidopsis thaliana... 108 2e-022
gb|BP621312.1|BP621312 BP621312 RAFL16 Arabidopsis thaliana... 108 2e-022
gb|BP792140.1|BP792140 BP792140 RAFL7 Arabidopsis thaliana ... 108 2e-022
gb|AV796302.1|AV796302 AV796302 RAFL9 Arabidopsis thaliana ... 108 3e-022
gb|BP788013.1|BP788013 BP788013 RAFL7 Arabidopsis thaliana ... 106 8e-022
emb|CR384133.1| Arabidopsis thaliana transposon insertion S... 106 8e-022
gb|AV553183.1|AV553183 AV553183 Arabidopsis thaliana roots ... 74 1e-021
gb|BP653434.1|BP653434 BP653434 RAFL19 Arabidopsis thaliana... 81 1e-021
gb|AV519394.2|AV519394 AV519394 Arabidopsis thaliana aboveg... 106 1e-021
gb|AV800034.1|AV800034 AV800034 RAFL9 Arabidopsis thaliana ... 71 3e-021
emb|X84728.1|ATPALGEN A.thaliana PAL gene 75 3e-021
gb|BP604648.1|BP604648 BP604648 RAFL16 Arabidopsis thaliana... 104 4e-021
>gb|AY088956.1| Arabidopsis thaliana clone 110886 mRNA, complete sequence
Length = 2402
Score = 150 bits (323), Expect(3) = 6e-057
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / +2
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 1946 SIFQKIGAFEEELKAVLPKEVEAARAAYGSGTAPIPNRIKECRSYPLYRFVREELGTKLL 2125
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 2126 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 2251
Score = 73.9 bits (155), Expect(3) = 6e-057
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2 / +2
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 1715 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 1870
Score = 37.7 bits (76), Expect(3) = 6e-057
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 1871 LMQRLRQVIVDHALSNGETEK 1933
>emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3, BAC clone T4D2
Length = 92611
Score = 150 bits (322), Expect(3) = 8e-057
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / -1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 68635 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 68456
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 68455 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 68330
Score = 73.9 bits (155), Expect(3) = 8e-057
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2 / -1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 68866 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 68711
Score = 37.7 bits (76), Expect(3) = 8e-057
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / -1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 68710 LMQRLRQVIVDHALSNGETEK 68648
>gb|L33678.1|ATHPAL2 Arabidopsis thaliana (strain Columbia) phenylalanine ammonia-lyase
(PAL2) gene, complete cds
Length = 4507
Score = 150 bits (322), Expect(3) = 9e-057
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / +2
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 3518 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 3697
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 3698 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 3823
Score = 73.9 bits (155), Expect(3) = 9e-057
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2 / +2
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 3287 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 3442
Score = 37.7 bits (76), Expect(3) = 9e-057
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 3443 LMQRLRQVIVDHALSNGETEK 3505
>ref|NM_115186.3| Arabidopsis thaliana PAL2; phenylalanine ammonia-lyase AT3G53260
(PAL2) mRNA, complete cds
Length = 2520
Score = 150 bits (322), Expect(3) = 9e-057
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / +3
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 2004 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 2183
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 2184 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 2309
Score = 73.9 bits (155), Expect(3) = 9e-057
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2 / +3
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 1773 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 1928
Score = 37.7 bits (76), Expect(3) = 9e-057
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 1929 LMQRLRQVIVDHALSNGETEK 1991
>gb|AY092957.1| Arabidopsis thaliana phenylalanine ammonia-lyase (At3g53260) mRNA,
complete cds
Length = 2414
Score = 150 bits (322), Expect(3) = 9e-057
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 1945 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 2124
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 2125 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 2250
Score = 73.9 bits (155), Expect(3) = 9e-057
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 1714 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 1869
Score = 37.7 bits (76), Expect(3) = 9e-057
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 1870 LMQRLRQVIVDHALSNGETEK 1932
>gb|AF367308.1| Arabidopsis thaliana AT3g53260/T4D2_190 mRNA, complete cds
Length = 2406
Score = 150 bits (322), Expect(3) = 9e-057
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / +3
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 1947 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 2126
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 2127 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 2252
Score = 73.9 bits (155), Expect(3) = 9e-057
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2 / +3
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 1716 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 1871
Score = 37.7 bits (76), Expect(3) = 9e-057
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 1872 LMQRLRQVIVDHALSNGETEK 1934
>gb|BT000035.1| Arabidopsis thaliana phenylalanine ammonia-lyase (At3g53260) mRNA,
complete cds
Length = 2260
Score = 150 bits (322), Expect(3) = 9e-057
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 1843 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 2022
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 2023 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 2148
Score = 73.9 bits (155), Expect(3) = 9e-057
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 1612 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 1767
Score = 37.7 bits (76), Expect(3) = 9e-057
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 1768 LMQRLRQVIVDHALSNGETEK 1830
>gb|AY133595.1| Arabidopsis thaliana AT3g53260/T4D2_190 mRNA, complete cds
Length = 2154
Score = 150 bits (322), Expect(3) = 9e-057
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 1843 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 2022
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 2023 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 2148
Score = 73.9 bits (155), Expect(3) = 9e-057
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 1612 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 1767
Score = 37.7 bits (76), Expect(3) = 9e-057
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 1768 LMQRLRQVIVDHALSNGETEK 1830
>emb|AX506118.1| Sequence 813 from Patent WO0216655
Length = 2154
Score = 150 bits (322), Expect(3) = 9e-057
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 1843 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 2022
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 2023 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 2148
Score = 73.9 bits (155), Expect(3) = 9e-057
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 1612 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 1767
Score = 37.7 bits (76), Expect(3) = 9e-057
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 1768 LMQRLRQVIVDHALSNGETEK 1830
>emb|AX651478.1| Sequence 279 from Patent WO03000898
Length = 2154
Score = 150 bits (322), Expect(3) = 9e-057
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 1843 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 2022
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 2023 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 2148
Score = 73.9 bits (155), Expect(3) = 9e-057
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 1612 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 1767
Score = 37.7 bits (76), Expect(3) = 9e-057
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 1768 LMQRLRQVIVDHALSNGETEK 1830
>emb|CQ805396.1| Sequence 1807 from Patent WO2004035798
Length = 2154
Score = 150 bits (322), Expect(3) = 9e-057
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 1843 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 2022
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 2023 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 2148
Score = 73.9 bits (155), Expect(3) = 9e-057
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 1612 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 1767
Score = 37.7 bits (76), Expect(3) = 9e-057
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 1768 LMQRLRQVIVDHALSNGETEK 1830
>gb|AY303129.1| Arabidopsis thaliana phenylalanine ammonia lyase (PAL2) mRNA,
complete cds
Length = 2154
Score = 150 bits (322), Expect(3) = 9e-057
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 1843 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 2022
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 2023 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 2148
Score = 73.9 bits (155), Expect(3) = 9e-057
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 1612 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 1767
Score = 37.7 bits (76), Expect(3) = 9e-057
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 1768 LMQRLRQVIVDHALSNGETEK 1830
>gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map g6825, complete sequence
Length = 134151
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / -3
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 119092 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 118913
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 118912 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 118787
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / -3
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 119323 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 119168
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / -3
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 119167 LIQKLRQVIVDHALINGESEK 119105
>gb|L33677.1|ATHPAL Arabidopsis thaliana (strain Landsberg erecta) phenylalanine
ammonia-lyase (PAL) gene, complete cds
Length = 4921
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +2
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 4265 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 4444
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 4445 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 4570
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / +2
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 4034 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 4189
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 4190 LIQKLRQVIVDHALVNGESEK 4252
>ref|NM_129260.2| Arabidopsis thaliana PAL1; phenylalanine ammonia-lyase AT2G37040
(PAL1) mRNA, complete cds
Length = 2530
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 1993 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 2172
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 2173 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 2298
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 1762 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 1917
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 1918 LIQKLRQVIVDHALINGESEK 1980
>gb|AY045919.1| Arabidopsis thaliana putative phenylalanine ammonia lyase PAL1
(At2g37040) mRNA, complete cds
Length = 2527
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 1993 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 2172
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 2173 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 2298
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 1762 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 1917
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 1918 LIQKLRQVIVDHALINGESEK 1980
>gb|BT003330.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
Length = 2484
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 1993 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 2172
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 2173 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 2298
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 1762 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 1917
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 1918 LIQKLRQVIVDHALINGESEK 1980
>gb|AY079363.1| Arabidopsis thaliana putative phenylalanine ammonia lyase PAL1
(At2g37040) mRNA, complete cds
Length = 2209
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 1867 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 2046
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 2047 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 2172
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 1636 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 1791
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 1792 LIQKLRQVIVDHALINGESEK 1854
>emb|AX412245.1| Sequence 9 from Patent WO0222675
Length = 2178
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 1867 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 2046
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 2047 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 2172
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 1636 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 1791
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 1792 LIQKLRQVIVDHALINGESEK 1854
>emb|AX412319.1| Sequence 83 from Patent WO0222675
Length = 2178
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 1867 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 2046
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 2047 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 2172
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 1636 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 1791
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 1792 LIQKLRQVIVDHALINGESEK 1854
>emb|AX412320.1| Sequence 84 from Patent WO0222675
Length = 2178
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 1867 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 2046
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 2047 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 2172
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 1636 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 1791
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 1792 LIQKLRQVIVDHALINGESEK 1854
>emb|AX507018.1| Sequence 1713 from Patent WO0216655
Length = 2178
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 1867 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 2046
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 2047 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 2172
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 1636 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 1791
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 1792 LIQKLRQVIVDHALINGESEK 1854
>emb|AX651263.1| Sequence 47 from Patent WO03000898
Length = 2178
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 1867 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 2046
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 2047 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 2172
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 1636 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 1791
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 1792 LIQKLRQVIVDHALINGESEK 1854
>emb|CQ804940.1| Sequence 1351 from Patent WO2004035798
Length = 2178
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 1867 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 2046
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 2047 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 2172
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 1636 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 1791
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 1792 LIQKLRQVIVDHALINGESEK 1854
>emb|CQ805130.1| Sequence 1541 from Patent WO2004035798
Length = 2178
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 1867 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 2046
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 2047 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 2172
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 1636 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 1791
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 1792 LIQKLRQVIVDHALINGESEK 1854
>gb|AY303128.1| Arabidopsis thaliana phenylalanine ammonia lyase (PAL1) mRNA,
complete cds
Length = 2178
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 1867 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 2046
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 2047 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 2172
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 1636 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 1791
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 1792 LIQKLRQVIVDHALINGESEK 1854
>dbj|AK221928.1| Arabidopsis thaliana mRNA for phenylalanine ammonia lyase, partial
cds, clone: RAFL22-40-C04
Length = 1167
Score = 146 bits (313), Expect(3) = 5e-055
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +2
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 764 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 943
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 944 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 1069
Score = 74.8 bits (157), Expect(3) = 5e-055
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2 / +2
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 533 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 688
Score = 35.0 bits (70), Expect(3) = 5e-055
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 689 LIQKLRQVIVDHALINGESEK 751
>gb|AV782312.1|AV782312 AV782312 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-16-D08 3',
mRNA sequence
Length = 694
Score = 150 bits (322), Expect(3) = 1e-054
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / -3
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 470 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 291
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 290 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 165
Score = 66.6 bits (139), Expect(3) = 1e-054
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +2 / -3
Query: 11 VTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
V+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 692 VSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 546
Score = 37.7 bits (76), Expect(3) = 1e-054
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / -3
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 545 LMQRLRQVIVDHALSNGETEK 483
>gb|AV544960.1|AV544960 AV544960 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ65f09F 3', mRNA sequence
Length = 651
Score = 150 bits (322), Expect(3) = 1e-054
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / -2
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 428 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 249
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 248 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 123
Score = 66.6 bits (139), Expect(3) = 1e-054
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +2 / -2
Query: 11 VTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
V+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 650 VSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 504
Score = 37.7 bits (76), Expect(3) = 1e-054
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / -2
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 503 LMQRLRQVIVDHALSNGETEK 441
>emb|BX823910.1|CNS0A7V1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS91ZB06 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2403
Score = 141 bits (303), Expect(3) = 3e-054
Identities = 55/102 (53%), Positives = 73/102 (71%)
Frame = +3 / +3
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+ +I EEEL+AVLP+ GTAP+ NRI + RS+P YRFVR+ELG L
Sbjct: 1998 SISQKIGALEEELKAVLPKEAEAARAAYGNGTAPIPNRIKECRSYPSYRFVREELGTKLL 2177
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 2178 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 2303
Score = 73.9 bits (155), Expect(3) = 3e-054
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2 / +3
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KNTV+QVAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 1767 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 1922
Score = 37.7 bits (76), Expect(3) = 3e-054
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 1923 LMQRLRQVIVDHALSNGETEK 1985
>gb|AV524210.1|AV524210 AV524210 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL57f08F 3', mRNA
sequence
Length = 639
Score = 150 bits (322), Expect(3) = 3e-053
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / -3
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 424 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 245
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 244 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 119
Score = 62.0 bits (129), Expect(3) = 3e-053
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2 / -3
Query: 20 VAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
VAKKVLT +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 637 VAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 500
Score = 37.7 bits (76), Expect(3) = 3e-053
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / -3
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 499 LMQRLRQVIVDHALSNGETEK 437
>emb|BX821358.1|CNS0AA3A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL35ZG05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 714
Score = 146 bits (313), Expect(3) = 6e-051
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / +3
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 213 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 392
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 393 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 518
Score = 61.1 bits (127), Expect(3) = 6e-051
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +2 / +3
Query: 23 AKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
AKKVLT +G+L +RF EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 3 AKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 137
Score = 35.0 bits (70), Expect(3) = 6e-051
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 138 LIQKLRQVIVDHALINGESEK 200
>gb|BX835465.1|BX835465 BX835465 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS12ZG08 3PRIM, mRNA
sequence
Length = 1006
Score = 150 bits (322), Expect(3) = 6e-050
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / -2
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 441 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 262
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 261 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 136
Score = 51.0 bits (105), Expect(3) = 6e-050
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2 / -2
Query: 17 QVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
++ +K + +G+L +RF EK+L+ +DRE VFTY +D SA+ P
Sbjct: 657 KLLRKC*PLESNGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 517
Score = 37.7 bits (76), Expect(3) = 6e-050
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / -2
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 516 LMQRLRQVIVDHALSNGETEK 454
>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence,
complete sequence
Length = 87937
Score = 139 bits (299), Expect(3) = 2e-049
Identities = 58/108 (53%), Positives = 74/108 (68%)
Frame = +3 / -2
Query: 210 DAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQE 389
+A SVF +I FE EL+ +LP+ GT+ +ANRI + RS+PLYRFVR E
Sbjct: 23286 EANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVRDE 23107
Query: 390 LGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
L LTGE ++SPGEE +KVFL IS GKL+DP+LECLKEW+G P+ I
Sbjct: 23106 LNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSI 22963
Score = 65.2 bits (136), Expect(3) = 2e-049
Identities = 24/52 (46%), Positives = 40/52 (76%)
Frame = +2 / -2
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
K+ V+QVAK+VLT+ +G+L +RF+E++++ +DRE VF+YA+D S + P
Sbjct: 23499 KSAVSQVAKRVLTVGANGELHPSRFTERDVLQVVDREYVFSYADDPCSLTYP 23344
Score = 32.2 bits (64), Expect(3) = 2e-049
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / -2
Query: 159 LMQKLRAVLVDHALSSGDAE 218
LMQKLR +LVDHAL+ + E
Sbjct: 23343 LMQKLRHILVDHALADPERE 23284
>ref|NM_111869.3| Arabidopsis thaliana ammonia ligase/ ammonia-lyase AT3G10340 mRNA,
complete cds
Length = 2584
Score = 139 bits (299), Expect(3) = 2e-049
Identities = 58/108 (53%), Positives = 74/108 (68%)
Frame = +3 / +2
Query: 210 DAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQE 389
+A SVF +I FE EL+ +LP+ GT+ +ANRI + RS+PLYRFVR E
Sbjct: 2042 EANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVRDE 2221
Query: 390 LGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
L LTGE ++SPGEE +KVFL IS GKL+DP+LECLKEW+G P+ I
Sbjct: 2222 LNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSI 2365
Score = 65.2 bits (136), Expect(3) = 2e-049
Identities = 24/52 (46%), Positives = 40/52 (76%)
Frame = +2 / +2
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
K+ V+QVAK+VLT+ +G+L +RF+E++++ +DRE VF+YA+D S + P
Sbjct: 1829 KSAVSQVAKRVLTVGANGELHPSRFTERDVLQVVDREYVFSYADDPCSLTYP 1984
Score = 32.2 bits (64), Expect(3) = 2e-049
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 159 LMQKLRAVLVDHALSSGDAE 218
LMQKLR +LVDHAL+ + E
Sbjct: 1985 LMQKLRHILVDHALADPERE 2044
>gb|AY099657.1| Arabidopsis thaliana putative phenylalanine ammonia-lyase (At3g10340)
mRNA, complete cds
Length = 2536
Score = 139 bits (299), Expect(3) = 2e-049
Identities = 58/108 (53%), Positives = 74/108 (68%)
Frame = +3 / +3
Query: 210 DAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQE 389
+A SVF +I FE EL+ +LP+ GT+ +ANRI + RS+PLYRFVR E
Sbjct: 2043 EANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVRDE 2222
Query: 390 LGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
L LTGE ++SPGEE +KVFL IS GKL+DP+LECLKEW+G P+ I
Sbjct: 2223 LNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSI 2366
Score = 65.2 bits (136), Expect(3) = 2e-049
Identities = 24/52 (46%), Positives = 40/52 (76%)
Frame = +2 / +3
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
K+ V+QVAK+VLT+ +G+L +RF+E++++ +DRE VF+YA+D S + P
Sbjct: 1830 KSAVSQVAKRVLTVGANGELHPSRFTERDVLQVVDREYVFSYADDPCSLTYP 1985
Score = 32.2 bits (64), Expect(3) = 2e-049
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 159 LMQKLRAVLVDHALSSGDAE 218
LMQKLR +LVDHAL+ + E
Sbjct: 1986 LMQKLRHILVDHALADPERE 2045
>gb|BT000252.1| Arabidopsis thaliana putative phenylalanine ammonia-lyase (At3g10340)
mRNA, complete cds
Length = 2229
Score = 139 bits (299), Expect(3) = 2e-049
Identities = 58/108 (53%), Positives = 74/108 (68%)
Frame = +3 / +1
Query: 210 DAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQE 389
+A SVF +I FE EL+ +LP+ GT+ +ANRI + RS+PLYRFVR E
Sbjct: 1795 EANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVRDE 1974
Query: 390 LGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
L LTGE ++SPGEE +KVFL IS GKL+DP+LECLKEW+G P+ I
Sbjct: 1975 LNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSI 2118
Score = 65.2 bits (136), Expect(3) = 2e-049
Identities = 24/52 (46%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
K+ V+QVAK+VLT+ +G+L +RF+E++++ +DRE VF+YA+D S + P
Sbjct: 1582 KSAVSQVAKRVLTVGANGELHPSRFTERDVLQVVDREYVFSYADDPCSLTYP 1737
Score = 32.2 bits (64), Expect(3) = 2e-049
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAE 218
LMQKLR +LVDHAL+ + E
Sbjct: 1738 LMQKLRHILVDHALADPERE 1797
>gb|AY303130.1| Arabidopsis thaliana phenylalanine ammonia lyase (PAL4) mRNA,
complete cds
Length = 2124
Score = 139 bits (299), Expect(3) = 2e-049
Identities = 58/108 (53%), Positives = 74/108 (68%)
Frame = +3 / +1
Query: 210 DAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQE 389
+A SVF +I FE EL+ +LP+ GT+ +ANRI + RS+PLYRFVR E
Sbjct: 1795 EANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVRDE 1974
Query: 390 LGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
L LTGE ++SPGEE +KVFL IS GKL+DP+LECLKEW+G P+ I
Sbjct: 1975 LNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSI 2118
Score = 65.2 bits (136), Expect(3) = 2e-049
Identities = 24/52 (46%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
K+ V+QVAK+VLT+ +G+L +RF+E++++ +DRE VF+YA+D S + P
Sbjct: 1582 KSAVSQVAKRVLTVGANGELHPSRFTERDVLQVVDREYVFSYADDPCSLTYP 1737
Score = 32.2 bits (64), Expect(3) = 2e-049
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAE 218
LMQKLR +LVDHAL+ + E
Sbjct: 1738 LMQKLRHILVDHALADPERE 1797
>gb|AV783398.1|AV783398 AV783398 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-09-D14 3',
mRNA sequence
Length = 663
Score = 146 bits (313), Expect(3) = 1e-044
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3 / -1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + NRI + RS+PLYRFVR+ELG L
Sbjct: 507 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELL 328
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 327 TGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 202
Score = 40.0 bits (81), Expect(3) = 1e-044
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2 / -1
Query: 80 EKELISAIDREAVFTYAEDAASASLP 157
EK+L+ +DRE V+TYA+D SA+ P
Sbjct: 660 EKDLLKVVDREQVYTYADDPCSATYP 583
Score = 35.0 bits (70), Expect(3) = 1e-044
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / -1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 582 LIQKLRQVIVDHALINGESEK 520
>gb|AV544717.1|AV544717 AV544717 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ56a09F 3', mRNA sequence
Length = 650
Score = 150 bits (322), Expect(3) = 4e-044
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / -2
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 514 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 335
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 334 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 209
Score = 37.7 bits (76), Expect(3) = 4e-044
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / -2
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 589 LMQRLRQVIVDHALSNGETEK 527
Score = 31.3 bits (62), Expect(3) = 4e-044
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 101 IDREAVFTYAEDAASASLP 157
+DRE VFTY +D SA+ P
Sbjct: 646 VDREQVFTYVDDPCSATYP 590
>gb|AV558603.1|AV558603 AV558603 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ102g03F 3', mRNA sequence
Length = 589
Score = 150 bits (322), Expect(3) = 4e-044
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / -1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 457 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 278
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 277 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 152
Score = 37.7 bits (76), Expect(3) = 4e-044
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / -1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 532 LMQRLRQVIVDHALSNGETEK 470
Score = 31.3 bits (62), Expect(3) = 4e-044
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 101 IDREAVFTYAEDAASASLP 157
+DRE VFTY +D SA+ P
Sbjct: 589 VDREQVFTYVDDPCSATYP 533
>gb|AV542768.1|AV542768 AV542768 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ19a05F 3', mRNA sequence
Length = 592
Score = 139 bits (299), Expect(3) = 3e-043
Identities = 58/108 (53%), Positives = 74/108 (68%)
Frame = +3 / -3
Query: 210 DAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQE 389
+A SVF +I FE EL+ +LP+ GT+ +ANRI + RS+PLYRFVR E
Sbjct: 428 EANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVRDE 249
Query: 390 LGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
L LTGE ++SPGEE +KVFL IS GKL+DP+LECLKEW+G P+ I
Sbjct: 248 LNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSI 105
Score = 44.6 bits (91), Expect(3) = 3e-043
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +2 / -3
Query: 53 GDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
G+L +RF+E++++ +DRE VF+YA+D S + P
Sbjct: 590 GELHPSRFTERDVLQVVDREYVFSYADDPCSLTYP 486
Score = 32.2 bits (64), Expect(3) = 3e-043
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / -3
Query: 159 LMQKLRAVLVDHALSSGDAE 218
LMQKLR +LVDHAL+ + E
Sbjct: 485 LMQKLRHILVDHALADPERE 426
>gb|AV559270.1|AV559270 AV559270 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ114c08F 3', mRNA sequence
Length = 576
Score = 149 bits (319), Expect(2) = 8e-040
Identities = 57/102 (55%), Positives = 76/102 (74%)
Frame = +3 / -3
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 457 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 278
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TG+K+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 277 TGQKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 152
Score = 37.7 bits (76), Expect(2) = 8e-040
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / -3
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 532 LMQRLRQVIVDHALSNGETEK 470
>gb|AI999678.1|AI999678 701557008 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701557008, mRNA sequence
Length = 531
Score = 139 bits (299), Expect(3) = 1e-039
Identities = 58/108 (53%), Positives = 74/108 (68%)
Frame = +3 / -3
Query: 210 DAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQE 389
+A SVF +I FE EL+ +LP+ GT+ +ANRI + RS+PLYRFVR E
Sbjct: 385 EANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVRDE 206
Query: 390 LGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
L LTGE ++SPGEE +KVFL IS GKL+DP+LECLKEW+G P+ I
Sbjct: 205 LNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSI 62
Score = 35.0 bits (70), Expect(3) = 1e-039
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2 / -2
Query: 71 RFSEKELISAIDREAVFTYAEDAASASLPADAET 172
RF+E++++ +DRE VF + LPA+ ET
Sbjct: 530 RFTERDVLQVVDREYVFFLXRRSLQPHLPANXET 429
Score = 29.5 bits (58), Expect(3) = 1e-039
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3 / -3
Query: 159 LMQKLRAVLVDHALSSGDAE 218
LM KLR +LVDHAL+ + E
Sbjct: 442 LMXKLRHILVDHALADPERE 383
>gb|AI996802.1|AI996802 701668476 A. thaliana, Columbia Col-0, root-1 Arabidopsis thaliana
cDNA clone 701668476, mRNA sequence
Length = 613
Score = 138 bits (296), Expect(3) = 1e-038
Identities = 54/102 (52%), Positives = 71/102 (69%)
Frame = +3 / -1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GT+ + N I + R +PLYRFVR+ELG L
Sbjct: 487 SIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNXIKECRXYPLYRFVREELGXELL 308
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGE +KVF I +GK++DPM+ECL EW+G P+PI
Sbjct: 307 TGEKVTSPGEXFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 182
Score = 35.4 bits (71), Expect(3) = 1e-038
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3 / -1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
L+QKLR V+VDHAL +G++E+
Sbjct: 562 LIQKLRXVIVDHALINGESEK 500
Score = 27.2 bits (53), Expect(3) = 1e-038
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2 / -3
Query: 110 EAVFTYAEDAASASLPADAE 169
E +TYA+D S ++P D+E
Sbjct: 611 EQXYTYADDPCSRNVPVDSE 552
>gb|BX840680.1|BX840680 BX840680 Arabidopsis thaliana Silique Col-0 Arabidopsis thaliana
cDNA clone GSLTSIL87ZB11 5PRIM, mRNA sequence
Length = 1077
Score = 61.1 bits (127), Expect(5) = 2e-037
Identities = 28/67 (41%), Positives = 36/67 (53%)
Frame = +3 / +2
Query: 234 FSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFLTG 413
F R+ + LR + TAP+ NRI + RS+PLYRFVR+ELG LTG
Sbjct: 686 FKRLELLKRSLRLCFQRKLKRLERLMGMRTAPIPNRIKECRSYPLYRFVREELGTKCLTG 865
Query: 414 EKLKSPG 434
EK+ G
Sbjct: 866 EKVVFSG 886
Score = 56.1 bits (116), Expect(5) = 2e-037
Identities = 20/40 (50%), Positives = 32/40 (80%)
Frame = +3 / +3
Query: 414 EKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
++L SPGEE +KVF + +GKL+DP+++ LK+ +G P+PI
Sbjct: 867 KRLCSPGEEFDKVFTAMCEGKLIDPLMDFLKDGNGAPIPI 986
Score = 49.2 bits (101), Expect(5) = 2e-037
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2 / +1
Query: 35 LTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
+T +G+L +RF EK+L+ +DR+ VFTY +D SA+ P
Sbjct: 481 VTTGINGELHPSRFCEKDLLKVVDRQQVFTYVDDPCSATYP 603
Score = 37.7 bits (76), Expect(5) = 2e-037
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQ+LR V+VDHALS+G+ E+
Sbjct: 604 LMQRLRQVIVDHALSNGETEK 666
Score = 27.2 bits (53), Expect(5) = 2e-037
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2 / +2
Query: 2 KNTVTQVAKKVLTM 43
KNTV+QVAKKVL +
Sbjct: 449 KNTVSQVAKKVLPL 490
>gb|AV547686.1|AV547686 AV547686 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL37f03F 3', mRNA sequence
Length = 505
Score = 150 bits (322), Expect(2) = 4e-036
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / -1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 457 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 278
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 277 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 152
Score = 24.0 bits (46), Expect(2) = 4e-036
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3 / -1
Query: 186 VDHALSSGDAER 221
VDHALS+G+ E+
Sbjct: 505 VDHALSNGETEK 470
>gb|AV544709.1|AV544709 AV544709 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ55g04F 3', mRNA sequence
Length = 392
Score = 150 bits (322), Expect(2) = 4e-036
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / -1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 344 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 165
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 164 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 39
Score = 24.0 bits (46), Expect(2) = 4e-036
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3 / -1
Query: 186 VDHALSSGDAER 221
VDHALS+G+ E+
Sbjct: 392 VDHALSNGETEK 357
>gb|BP606641.1|BP606641 BP606641 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-71-K24 3',
mRNA sequence
Length = 432
Score = 139 bits (299), Expect(2) = 2e-035
Identities = 58/108 (53%), Positives = 74/108 (68%)
Frame = +3 / -2
Query: 210 DAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQE 389
+A SVF +I FE EL+ +LP+ GT+ +ANRI + RS+PLYRFVR E
Sbjct: 368 EANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVRDE 189
Query: 390 LGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
L LTGE ++SPGEE +KVFL IS GKL+DP+LECLKEW+G P+ I
Sbjct: 188 LNTELLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSI 45
Score = 32.2 bits (64), Expect(2) = 2e-035
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / -2
Query: 159 LMQKLRAVLVDHALSSGDAE 218
LMQKLR +LVDHAL+ + E
Sbjct: 425 LMQKLRHILVDHALADPERE 366
>gb|BE662969.1|BE662969 EST00113 Arabidopsis Acute Ozone Forward-Subtracted Library
Arabidopsis thaliana cDNA clone AtAOzF26 similar to
phenylalanine ammonia lyase PAL2, mRNA sequence
Length = 529
Score = 150 bits (322), Expect = 6e-035
Identities = 58/102 (56%), Positives = 76/102 (74%)
Frame = +3 / +1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
S+F +I FEEEL+AVLP+ GTAP+ NRI + RS+PLYRFVR+ELG L
Sbjct: 67 SIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLL 246
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
TGEK+ SPGEE +KVF + +GKL+DP+++CLKEW+G P+PI
Sbjct: 247 TGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 372
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,188,309,985
Number of Sequences: 1013581
Number of extensions: 14436776
Number of successful extensions: 122806
Number of sequences better than 1.0e-020: 155
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 58600301452
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)