TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804904.2.2
(798 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV781844.1|AV781844 AV781844 RAFL4 Arabidopsis thaliana ... 260 4e-068
gb|AV784036.1|AV784036 AV784036 RAFL5 Arabidopsis thaliana ... 260 4e-068
gb|CF651604.1|CF651604 12-L020135w-066-001-G03-SP6P MPIZ-AD... 260 4e-068
gb|CK118127.1|CK118127 218a16.p1 AtM1 Arabidopsis thaliana ... 260 4e-068
gb|CK119040.1|CK119040 214l04.p1 AtM1 Arabidopsis thaliana ... 260 4e-068
gb|AF378869.1|AF378869 Arabidopsis thaliana AT4g27090/T24A1... 260 4e-068
ref|NM_118843.2| Arabidopsis thaliana structural constituen... 260 4e-068
gb|CB264616.1|CB264616 49-E015024-035-004-B14-T7R MPIZ-ADIS... 259 6e-068
gb|AY065368.1| Arabidopsis thaliana putative 60S ribosomal ... 259 1e-067
gb|AY085447.1| Arabidopsis thaliana clone 15198 mRNA, compl... 259 1e-067
emb|BX820403.1|CNS0A7WW Arabidopsis thaliana Full-length cD... 259 1e-067
ref|NM_127604.2| Arabidopsis thaliana structural constituen... 259 1e-067
gb|BE038422.1|BE038422 AA17C08 AA Arabidopsis thaliana cDNA... 258 1e-067
gb|AV824370.1|AV824370 AV824370 RAFL6 Arabidopsis thaliana ... 257 4e-067
gb|AY050473.1| Arabidopsis thaliana AT4g27090/T24A18_40 mRN... 257 4e-067
gb|CB253512.1|CB253512 95-E018427-019-008-M23-T7R MPIZ-ADIS... 256 5e-067
gb|AY096618.1| Arabidopsis thaliana putative 60S ribosomal ... 256 7e-067
emb|AX506868.1| Sequence 1563 from Patent WO0216655 255 1e-066
gb|AV821405.1|AV821405 AV821405 RAFL4 Arabidopsis thaliana ... 247 4e-064
gb|BP560955.2|BP560955 BP560955 RAFL5 Arabidopsis thaliana ... 247 4e-064
gb|CB254828.1|CB254828 58-E018361-019-007-C16-T7R MPIZ-ADIS... 245 1e-063
gb|CK118237.1|CK118237 217i19.p1 AtM1 Arabidopsis thaliana ... 244 3e-063
gb|AV534837.1|AV534837 AV534837 Arabidopsis thaliana flower... 243 7e-063
gb|CF651603.1|CF651603 12-L020135-066-001-G03-SP6P MPIZ-ADI... 230 4e-059
emb|BX826370.1|CNS0A41L Arabidopsis thaliana Full-length cD... 139 1e-058
gb|BP816684.1|BP816684 BP816684 RAFL19 Arabidopsis thaliana... 225 2e-057
gb|BP866196.1|BP866196 BP866196 RAFL21 Arabidopsis thaliana... 122 7e-057
gb|BP853658.1|BP853658 BP853658 RAFL21 Arabidopsis thaliana... 222 9e-057
gb|BP842465.1|BP842465 BP842465 RAFL21 Arabidopsis thaliana... 217 4e-055
gb|BP845987.1|BP845987 BP845987 RAFL21 Arabidopsis thaliana... 216 7e-055
gb|BP800136.1|BP800136 BP800136 RAFL14 Arabidopsis thaliana... 204 1e-053
gb|BP843574.1|BP843574 BP843574 RAFL21 Arabidopsis thaliana... 211 2e-053
emb|BX818834.1|CNS0A8VC Arabidopsis thaliana Full-length cD... 211 2e-053
gb|BP863509.1|BP863509 BP863509 RAFL21 Arabidopsis thaliana... 122 9e-053
gb|BP860997.1|BP860997 BP860997 RAFL21 Arabidopsis thaliana... 206 8e-052
gb|BP845942.1|BP845942 BP845942 RAFL21 Arabidopsis thaliana... 138 2e-051
gb|BP843110.1|BP843110 BP843110 RAFL21 Arabidopsis thaliana... 204 4e-051
gb|BP847862.1|BP847862 BP847862 RAFL21 Arabidopsis thaliana... 180 6e-051
gb|BP864372.1|BP864372 BP864372 RAFL21 Arabidopsis thaliana... 114 8e-051
gb|BP827263.1|BP827263 BP827263 RAFL19 Arabidopsis thaliana... 201 3e-050
gb|AV531951.1|AV531951 AV531951 Arabidopsis thaliana flower... 198 2e-049
gb|BP586511.1|BP586511 BP586511 RAFL15 Arabidopsis thaliana... 198 2e-049
gb|BP864490.1|BP864490 BP864490 RAFL21 Arabidopsis thaliana... 198 2e-049
gb|BP856452.1|BP856452 BP856452 RAFL21 Arabidopsis thaliana... 138 4e-049
gb|BP586216.1|BP586216 BP586216 RAFL15 Arabidopsis thaliana... 194 3e-048
gb|T22860.1|T22860 4868 Lambda-PRL2 Arabidopsis thaliana cD... 193 4e-048
gb|BP575470.1|BP575470 BP575470 RAFL14 Arabidopsis thaliana... 193 4e-048
gb|BP635805.1|BP635805 BP635805 RAFL18 Arabidopsis thaliana... 193 4e-048
gb|BP856130.1|BP856130 BP856130 RAFL21 Arabidopsis thaliana... 124 1e-047
gb|BP849678.1|BP849678 BP849678 RAFL21 Arabidopsis thaliana... 134 3e-047
emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome... 87 8e-047
gb|AC007109.7| Arabidopsis thaliana chromosome 2 clone T13C... 88 9e-047
gb|BP860765.1|BP860765 BP860765 RAFL21 Arabidopsis thaliana... 114 3e-046
gb|BP867797.1|BP867797 BP867797 RAFL21 Arabidopsis thaliana... 184 2e-045
gb|BP821710.1|BP821710 BP821710 RAFL19 Arabidopsis thaliana... 161 4e-045
emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosom... 87 6e-045
gb|AI997481.1|AI997481 701554127 A. thaliana, Columbia Col-... 121 1e-044
gb|BP799467.1|BP799467 BP799467 RAFL14 Arabidopsis thaliana... 116 2e-044
gb|BP585750.1|BP585750 BP585750 RAFL15 Arabidopsis thaliana... 180 4e-044
gb|BP784666.1|BP784666 BP784666 RAFL7 Arabidopsis thaliana ... 178 2e-043
gb|BP578366.1|BP578366 BP578366 RAFL14 Arabidopsis thaliana... 154 5e-043
gb|BP857725.1|BP857725 BP857725 RAFL21 Arabidopsis thaliana... 131 5e-043
gb|BP580988.1|BP580988 BP580988 RAFL14 Arabidopsis thaliana... 174 3e-042
gb|BP616173.1|BP616173 BP616173 RAFL16 Arabidopsis thaliana... 164 3e-042
gb|BP868284.1|BP868284 BP868284 RAFL21 Arabidopsis thaliana... 115 4e-042
gb|BP597426.1|BP597426 BP597426 RAFL15 Arabidopsis thaliana... 170 5e-041
gb|BE523677.1|BE523677 M40D11STM Arabidopsis developing see... 170 6e-041
gb|BP594946.1|BP594946 BP594946 RAFL15 Arabidopsis thaliana... 169 9e-041
gb|AV564782.1|AV564782 AV564782 Arabidopsis thaliana green ... 168 2e-040
gb|BP577085.1|BP577085 BP577085 RAFL14 Arabidopsis thaliana... 167 3e-040
gb|BP806298.1|BP806298 BP806298 RAFL16 Arabidopsis thaliana... 114 5e-040
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 87 1e-039
gb|AV789575.1|AV789575 AV789575 RAFL6 Arabidopsis thaliana ... 165 2e-039
gb|AV820668.1|AV820668 AV820668 RAFL11 Arabidopsis thaliana... 165 2e-039
gb|BP575262.1|BP575262 BP575262 RAFL14 Arabidopsis thaliana... 165 2e-039
gb|BP854616.1|BP854616 BP854616 RAFL21 Arabidopsis thaliana... 105 4e-039
gb|AV789152.1|AV789152 AV789152 RAFL6 Arabidopsis thaliana ... 161 2e-038
gb|BP626679.1|BP626679 BP626679 RAFL17 Arabidopsis thaliana... 161 3e-038
gb|BP849718.1|BP849718 BP849718 RAFL21 Arabidopsis thaliana... 94 3e-037
gb|BP641343.1|BP641343 BP641343 RAFL19 Arabidopsis thaliana... 157 3e-037
gb|AV790235.1|AV790235 AV790235 RAFL6 Arabidopsis thaliana ... 156 6e-037
gb|AV785709.1|AV785709 AV785709 RAFL6 Arabidopsis thaliana ... 155 1e-036
gb|BP610096.1|BP610096 BP610096 RAFL16 Arabidopsis thaliana... 155 1e-036
gb|BP625359.1|BP625359 BP625359 RAFL17 Arabidopsis thaliana... 129 2e-036
gb|BP860007.1|BP860007 BP860007 RAFL21 Arabidopsis thaliana... 110 2e-036
gb|BP593704.1|BP593704 BP593704 RAFL15 Arabidopsis thaliana... 114 3e-036
gb|BP634478.1|BP634478 BP634478 RAFL17 Arabidopsis thaliana... 152 1e-035
gb|BP861626.1|BP861626 BP861626 RAFL21 Arabidopsis thaliana... 151 2e-035
gb|BP594218.1|BP594218 BP594218 RAFL15 Arabidopsis thaliana... 150 4e-035
gb|BP862318.1|BP862318 BP862318 RAFL21 Arabidopsis thaliana... 119 8e-035
gb|BP589850.1|BP589850 BP589850 RAFL15 Arabidopsis thaliana... 103 4e-034
gb|BP799123.1|BP799123 BP799123 RAFL14 Arabidopsis thaliana... 57 5e-034
gb|BP567540.1|BP567540 BP567540 RAFL14 Arabidopsis thaliana... 146 7e-034
gb|BP844124.1|BP844124 BP844124 RAFL21 Arabidopsis thaliana... 71 7e-034
gb|AA585838.1|AA585838 28487 Lambda-PRL2 Arabidopsis thalia... 145 2e-033
gb|BP575360.1|BP575360 BP575360 RAFL14 Arabidopsis thaliana... 142 2e-032
gb|BP643814.1|BP643814 BP643814 RAFL19 Arabidopsis thaliana... 137 2e-032
gb|BP837234.1|BP837234 BP837234 RAFL19 Arabidopsis thaliana... 135 1e-031
gb|BP613409.1|BP613409 BP613409 RAFL16 Arabidopsis thaliana... 119 2e-031
gb|BP587944.1|BP587944 BP587944 RAFL15 Arabidopsis thaliana... 137 4e-031
gb|BP627452.1|BP627452 BP627452 RAFL17 Arabidopsis thaliana... 134 3e-030
gb|BP628325.1|BP628325 BP628325 RAFL17 Arabidopsis thaliana... 134 4e-030
gb|BP629494.1|BP629494 BP629494 RAFL17 Arabidopsis thaliana... 133 9e-030
gb|AV785880.1|AV785880 AV785880 RAFL6 Arabidopsis thaliana ... 132 1e-029
gb|BP659935.1|BP659935 BP659935 RAFL19 Arabidopsis thaliana... 78 4e-028
gb|BP578758.1|BP578758 BP578758 RAFL14 Arabidopsis thaliana... 90 1e-027
gb|BP648411.1|BP648411 BP648411 RAFL19 Arabidopsis thaliana... 124 3e-027
gb|BP660581.1|BP660581 BP660581 RAFL21 Arabidopsis thaliana... 76 4e-025
gb|BP826835.1|BP826835 BP826835 RAFL19 Arabidopsis thaliana... 100 2e-024
gb|BP627571.1|BP627571 BP627571 RAFL17 Arabidopsis thaliana... 113 6e-024
gb|BP664156.1|BP664156 BP664156 RAFL21 Arabidopsis thaliana... 67 6e-024
gb|AV808368.1|AV808368 AV808368 RAFL9 Arabidopsis thaliana ... 111 2e-023
gb|AV555106.1|AV555106 AV555106 Arabidopsis thaliana green ... 107 4e-022
gb|BP662569.1|BP662569 BP662569 RAFL21 Arabidopsis thaliana... 62 2e-021
>gb|AV781844.1|AV781844 AV781844 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-M12 3',
mRNA sequence
Length = 640
Score = 260 bits (562), Expect = 4e-068
Identities = 113/150 (75%), Positives = 127/150 (84%)
Frame = +3 / -1
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R
Sbjct: 601 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMER 422
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDF 395
Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDF
Sbjct: 421 IQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDF 242
Query: 396 DRFKVMLAKIKRGGAIRQELAKLKKASTA* 485
DRFK+MLAKIK+ G +RQELAKLKK TA*
Sbjct: 241 DRFKIMLAKIKKAGVVRQELAKLKKEITA* 152
Score = 182 bits (391), Expect = 2e-044
Identities = 87/136 (63%), Positives = 95/136 (69%)
Frame = -3 / +3
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 156 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 335
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW P*S P*FT
Sbjct: 336 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 515
Query: 121 RATRPISTNLLNGILA 74
AT PIST LL I A
Sbjct: 516 SATLPISTYLLKPIFA 563
Score = 108 bits (231), Expect(2) = 1e-029
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -2 / +2
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 317 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 496
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 497 IFSVVHKCYSPDLNVPLETHFR 562
Score = 107 bits (228), Expect(2) = 8e-030
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +2 / -3
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 560 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYC 381
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 380 H*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 279
Score = 45.5 bits (93), Expect(2) = 8e-030
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / -3
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SF 520
L**VQ H G+D E WC QARA + EG H L + C SF
Sbjct: 245 L**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFCCLSF 117
Score = 43.7 bits (89), Expect(2) = 1e-029
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -1 / +1
Query: 489 LLKLWTPS*AWRALA**HHPS*SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
L++ +PS* +ALA* H S*S P * *TYQS * S + AS PMS SPT
Sbjct: 148 LIRQ*SPS*VLQALA*QHQLS*SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 309
>gb|AV784036.1|AV784036 AV784036 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-15-J03 3',
mRNA sequence
Length = 599
Score = 260 bits (562), Expect = 4e-068
Identities = 113/150 (75%), Positives = 127/150 (84%)
Frame = +3 / -3
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R
Sbjct: 579 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMER 400
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDF 395
Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDF
Sbjct: 399 IQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDF 220
Query: 396 DRFKVMLAKIKRGGAIRQELAKLKKASTA* 485
DRFK+MLAKIK+ G +RQELAKLKK TA*
Sbjct: 219 DRFKIMLAKIKKAGVVRQELAKLKKEITA* 130
Score = 182 bits (391), Expect = 2e-044
Identities = 87/136 (63%), Positives = 95/136 (69%)
Frame = -3 / +2
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 134 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 313
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW P*S P*FT
Sbjct: 314 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 493
Query: 121 RATRPISTNLLNGILA 74
AT PIST LL I A
Sbjct: 494 SATLPISTYLLKPIFA 541
Score = 108 bits (231), Expect(2) = 1e-029
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -2 / +1
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 295 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 474
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 475 IFSVVHKCYSPDLNVPLETHFR 540
Score = 107 bits (228), Expect(2) = 8e-030
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +2 / -2
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 538 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYC 359
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 358 H*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 257
Score = 45.5 bits (93), Expect(2) = 8e-030
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / -2
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SF 520
L**VQ H G+D E WC QARA + EG H L + C SF
Sbjct: 223 L**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFCCLSF 95
Score = 43.7 bits (89), Expect(2) = 1e-029
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -1 / +3
Query: 489 LLKLWTPS*AWRALA**HHPS*SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
L++ +PS* +ALA* H S*S P * *TYQS * S + AS PMS SPT
Sbjct: 126 LIRQ*SPS*VLQALA*QHQLS*SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 287
>gb|CF651604.1|CF651604 12-L020135w-066-001-G03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana
cDNA clone MPIZp2001G031Q 5-PRIME, mRNA sequence
Length = 705
Score = 260 bits (562), Expect = 4e-068
Identities = 113/150 (75%), Positives = 127/150 (84%)
Frame = +3 / +1
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R
Sbjct: 7 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMER 186
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDF 395
Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDF
Sbjct: 187 IQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDF 366
Query: 396 DRFKVMLAKIKRGGAIRQELAKLKKASTA* 485
DRFK+MLAKIK+ G +RQELAKLKK TA*
Sbjct: 367 DRFKIMLAKIKKAGVVRQELAKLKKEITA* 456
Score = 182 bits (391), Expect = 2e-044
Identities = 87/136 (63%), Positives = 95/136 (69%)
Frame = -3 / -2
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 452 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 273
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW P*S P*FT
Sbjct: 272 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 93
Query: 121 RATRPISTNLLNGILA 74
AT PIST LL I A
Sbjct: 92 SATLPISTYLLKPIFA 45
Score = 108 bits (231), Expect(2) = 1e-029
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -2 / -1
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 291 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 112
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 111 IFSVVHKCYSPDLNVPLETHFR 46
Score = 107 bits (228), Expect(2) = 8e-030
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +2 / +3
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 48 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYC 227
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 228 H*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 329
Score = 45.5 bits (93), Expect(2) = 8e-030
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SF 520
L**VQ H G+D E WC QARA + EG H L + C SF
Sbjct: 363 L**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFCCLSF 491
Score = 43.7 bits (89), Expect(2) = 1e-029
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -1 / -3
Query: 489 LLKLWTPS*AWRALA**HHPS*SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
L++ +PS* +ALA* H S*S P * *TYQS * S + AS PMS SPT
Sbjct: 460 LIRQ*SPS*VLQALA*QHQLS*SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 299
>gb|CK118127.1|CK118127 218a16.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011A16218
5-PRIME, mRNA sequence
Length = 630
Score = 260 bits (562), Expect = 4e-068
Identities = 113/150 (75%), Positives = 127/150 (84%)
Frame = +3 / +2
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R
Sbjct: 23 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMER 202
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDF 395
Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDF
Sbjct: 203 IQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDF 382
Query: 396 DRFKVMLAKIKRGGAIRQELAKLKKASTA* 485
DRFK+MLAKIK+ G +RQELAKLKK TA*
Sbjct: 383 DRFKIMLAKIKKAGVVRQELAKLKKEITA* 472
Score = 182 bits (391), Expect = 2e-044
Identities = 87/136 (63%), Positives = 95/136 (69%)
Frame = -3 / -1
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 468 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 289
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW P*S P*FT
Sbjct: 288 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 109
Query: 121 RATRPISTNLLNGILA 74
AT PIST LL I A
Sbjct: 108 SATLPISTYLLKPIFA 61
Score = 108 bits (231), Expect(2) = 1e-029
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -2 / -3
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 307 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 128
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 127 IFSVVHKCYSPDLNVPLETHFR 62
Score = 107 bits (228), Expect(2) = 8e-030
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +2 / +1
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 64 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYC 243
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 244 H*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 345
Score = 45.5 bits (93), Expect(2) = 8e-030
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SF 520
L**VQ H G+D E WC QARA + EG H L + C SF
Sbjct: 379 L**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFCCLSF 507
Score = 43.7 bits (89), Expect(2) = 1e-029
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -1 / -2
Query: 489 LLKLWTPS*AWRALA**HHPS*SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
L++ +PS* +ALA* H S*S P * *TYQS * S + AS PMS SPT
Sbjct: 476 LIRQ*SPS*VLQALA*QHQLS*SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 315
>gb|CK119040.1|CK119040 214l04.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011L04214
5-PRIME, mRNA sequence
Length = 604
Score = 260 bits (562), Expect = 4e-068
Identities = 113/150 (75%), Positives = 127/150 (84%)
Frame = +3 / +2
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R
Sbjct: 11 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMER 190
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDF 395
Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDF
Sbjct: 191 IQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDF 370
Query: 396 DRFKVMLAKIKRGGAIRQELAKLKKASTA* 485
DRFK+MLAKIK+ G +RQELAKLKK TA*
Sbjct: 371 DRFKIMLAKIKKAGVVRQELAKLKKEITA* 460
Score = 182 bits (391), Expect = 2e-044
Identities = 87/136 (63%), Positives = 95/136 (69%)
Frame = -3 / -2
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 456 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 277
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW P*S P*FT
Sbjct: 276 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 97
Query: 121 RATRPISTNLLNGILA 74
AT PIST LL I A
Sbjct: 96 SATLPISTYLLKPIFA 49
Score = 108 bits (231), Expect(2) = 1e-029
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -2 / -1
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 295 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 116
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 115 IFSVVHKCYSPDLNVPLETHFR 50
Score = 107 bits (228), Expect(2) = 8e-030
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +2 / +1
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 52 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYC 231
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 232 H*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 333
Score = 45.5 bits (93), Expect(2) = 8e-030
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SF 520
L**VQ H G+D E WC QARA + EG H L + C SF
Sbjct: 367 L**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFCCLSF 495
Score = 43.7 bits (89), Expect(2) = 1e-029
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -1 / -3
Query: 489 LLKLWTPS*AWRALA**HHPS*SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
L++ +PS* +ALA* H S*S P * *TYQS * S + AS PMS SPT
Sbjct: 464 LIRQ*SPS*VLQALA*QHQLS*SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 303
>gb|AF378869.1|AF378869 Arabidopsis thaliana AT4g27090/T24A18_40 mRNA, complete cds
Length = 619
Score = 260 bits (562), Expect = 4e-068
Identities = 113/150 (75%), Positives = 127/150 (84%)
Frame = +3 / +1
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R
Sbjct: 19 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMER 198
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDF 395
Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDF
Sbjct: 199 IQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDF 378
Query: 396 DRFKVMLAKIKRGGAIRQELAKLKKASTA* 485
DRFK+MLAKIK+ G +RQELAKLKK TA*
Sbjct: 379 DRFKIMLAKIKKAGVVRQELAKLKKEITA* 468
Score = 182 bits (391), Expect = 2e-044
Identities = 87/136 (63%), Positives = 95/136 (69%)
Frame = -3 / -3
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 464 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 285
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW P*S P*FT
Sbjct: 284 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 105
Query: 121 RATRPISTNLLNGILA 74
AT PIST LL I A
Sbjct: 104 SATLPISTYLLKPIFA 57
Score = 108 bits (231), Expect(2) = 1e-029
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -2 / -2
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 303 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 124
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 123 IFSVVHKCYSPDLNVPLETHFR 58
Score = 107 bits (228), Expect(2) = 8e-030
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +2 / +3
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 60 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYC 239
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 240 H*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 341
Score = 45.5 bits (93), Expect(2) = 8e-030
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SF 520
L**VQ H G+D E WC QARA + EG H L + C SF
Sbjct: 375 L**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFCCLSF 503
Score = 43.7 bits (89), Expect(2) = 1e-029
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -1 / -1
Query: 489 LLKLWTPS*AWRALA**HHPS*SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
L++ +PS* +ALA* H S*S P * *TYQS * S + AS PMS SPT
Sbjct: 472 LIRQ*SPS*VLQALA*QHQLS*SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 311
>ref|NM_118843.2| Arabidopsis thaliana structural constituent of ribosome AT4G27090
mRNA, complete cds
Length = 668
Score = 260 bits (562), Expect = 4e-068
Identities = 113/150 (75%), Positives = 127/150 (84%)
Frame = +3 / +2
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R
Sbjct: 20 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMER 199
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDF 395
Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDF
Sbjct: 200 IQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDF 379
Query: 396 DRFKVMLAKIKRGGAIRQELAKLKKASTA* 485
DRFK+MLAKIK+ G +RQELAKLKK TA*
Sbjct: 380 DRFKIMLAKIKKAGVVRQELAKLKKEITA* 469
Score = 182 bits (391), Expect = 2e-044
Identities = 87/136 (63%), Positives = 95/136 (69%)
Frame = -3 / -3
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 465 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 286
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW P*S P*FT
Sbjct: 285 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 106
Query: 121 RATRPISTNLLNGILA 74
AT PIST LL I A
Sbjct: 105 SATLPISTYLLKPIFA 58
Score = 108 bits (231), Expect(2) = 1e-029
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -2 / -2
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 304 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 125
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 124 IFSVVHKCYSPDLNVPLETHFR 59
Score = 107 bits (228), Expect(2) = 8e-030
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +2 / +1
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 61 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYC 240
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 241 H*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 342
Score = 45.5 bits (93), Expect(2) = 8e-030
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SF 520
L**VQ H G+D E WC QARA + EG H L + C SF
Sbjct: 376 L**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFCCLSF 504
Score = 43.7 bits (89), Expect(2) = 1e-029
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -1 / -1
Query: 489 LLKLWTPS*AWRALA**HHPS*SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
L++ +PS* +ALA* H S*S P * *TYQS * S + AS PMS SPT
Sbjct: 473 LIRQ*SPS*VLQALA*QHQLS*SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 312
>gb|CB264616.1|CB264616 49-E015024-035-004-B14-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000B144Q 5-PRIME, mRNA sequence
Length = 596
Score = 259 bits (561), Expect = 6e-068
Identities = 111/137 (81%), Positives = 124/137 (90%)
Frame = +3 / +3
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTDI
Sbjct: 39 AKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDI 218
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+
Sbjct: 219 VIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKA 398
Query: 435 GAIRQELAKLKKASTA* 485
G +RQELAKLKK TA*
Sbjct: 399 GVVRQELAKLKKEITA* 449
Score = 182 bits (391), Expect = 2e-044
Identities = 87/136 (63%), Positives = 95/136 (69%)
Frame = -3 / -2
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 445 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 266
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW P*S P*FT
Sbjct: 265 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 86
Query: 121 RATRPISTNLLNGILA 74
AT PIST LL I A
Sbjct: 85 SATLPISTYLLKPIFA 38
Score = 108 bits (231), Expect(2) = 1e-029
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -2 / -1
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 284 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 105
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 104 IFSVVHKCYSPDLNVPLETHFR 39
Score = 107 bits (228), Expect(2) = 8e-030
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +2 / +2
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 41 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYC 220
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 221 H*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 322
Score = 45.5 bits (93), Expect(2) = 8e-030
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / +2
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SF 520
L**VQ H G+D E WC QARA + EG H L + C SF
Sbjct: 356 L**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFCCLSF 484
Score = 43.7 bits (89), Expect(2) = 1e-029
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -1 / -3
Query: 489 LLKLWTPS*AWRALA**HHPS*SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
L++ +PS* +ALA* H S*S P * *TYQS * S + AS PMS SPT
Sbjct: 453 LIRQ*SPS*VLQALA*QHQLS*SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 292
>gb|AY065368.1| Arabidopsis thaliana putative 60S ribosomal protein L14 (At2g20450)
mRNA, complete cds
Length = 672
Score = 259 bits (559), Expect = 1e-067
Identities = 111/141 (78%), Positives = 125/141 (88%)
Frame = +3 / +1
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A+M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 52 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 231
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIKR
Sbjct: 232 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 411
Query: 435 GAIRQELAKLKKASTA*GVSF 497
G +RQELAKLK+ A* +++
Sbjct: 412 GIVRQELAKLKREIAA*FLNY 474
Score = 182 bits (392), Expect = 1e-044
Identities = 87/136 (63%), Positives = 96/136 (70%)
Frame = -3 / -2
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A + SLASSCL P LLI A+M LNLSKSL ALLF TISFLPHELFSHL FTSA SI
Sbjct: 458 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 279
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ FLGT L+S+ MSV ++ KF W L++SGASTSALFW P*S P* T
Sbjct: 278 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 99
Query: 121 RATRPISTNLLNGILA 74
AT PISTNLL ILA
Sbjct: 98 SATLPISTNLLKPILA 51
Score = 148 bits (318), Expect = 2e-034
Identities = 67/133 (50%), Positives = 87/133 (65%)
Frame = +2 / +3
Query: 92 EVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQT 271
E+RGD G LR GLW +R +RRC RP+QGTCGCP*+G+ P E + ++Y*H+ *+Q
Sbjct: 69 EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQ 248
Query: 272 CPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWCYQAR 451
QE+ D G+G *CE+QVGE+ MG E C EE+S Q* * VQ H G++ EGW +A
Sbjct: 249 SSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQDHVGQNQEGWYCEAG 428
Query: 452 ARQA*EGVHSLRS 490
A A +G L S
Sbjct: 429 AC*AKKGDRCLIS 467
Score = 121 bits (258), Expect(2) = 6e-035
Identities = 47/80 (58%), Positives = 64/80 (80%)
Frame = -2 / -1
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS LH L+Q LLG++ D+N DVSK +PL++HL H+RGIHKCPVLVD+IDD+ E +I
Sbjct: 297 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 118
Query: 140 VLPVVHQGHAPDLHEPLERH 81
+L VV++ H+P+LHE L+ H
Sbjct: 117 ILAVVNERHSPNLHESLKTH 58
Score = 49.2 bits (101), Expect(2) = 6e-035
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2 / -1
Query: 461 LGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQ 357
L +LLP +T+PL+ QHD EP+K+IE S LL N+
Sbjct: 438 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 334
>gb|AY085447.1| Arabidopsis thaliana clone 15198 mRNA, complete sequence
Length = 628
Score = 259 bits (559), Expect = 1e-067
Identities = 111/141 (78%), Positives = 125/141 (88%)
Frame = +3 / +1
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A+M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 52 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 231
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIKR
Sbjct: 232 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 411
Query: 435 GAIRQELAKLKKASTA*GVSF 497
G +RQELAKLK+ A* +++
Sbjct: 412 GIVRQELAKLKREIAA*FLNY 474
Score = 182 bits (392), Expect = 1e-044
Identities = 87/136 (63%), Positives = 96/136 (70%)
Frame = -3 / -3
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A + SLASSCL P LLI A+M LNLSKSL ALLF TISFLPHELFSHL FTSA SI
Sbjct: 458 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 279
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ FLGT L+S+ MSV ++ KF W L++SGASTSALFW P*S P* T
Sbjct: 278 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 99
Query: 121 RATRPISTNLLNGILA 74
AT PISTNLL ILA
Sbjct: 98 SATLPISTNLLKPILA 51
Score = 148 bits (318), Expect = 2e-034
Identities = 67/133 (50%), Positives = 87/133 (65%)
Frame = +2 / +3
Query: 92 EVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQT 271
E+RGD G LR GLW +R +RRC RP+QGTCGCP*+G+ P E + ++Y*H+ *+Q
Sbjct: 69 EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQ 248
Query: 272 CPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWCYQAR 451
QE+ D G+G *CE+QVGE+ MG E C EE+S Q* * VQ H G++ EGW +A
Sbjct: 249 SSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQDHVGQNQEGWYCEAG 428
Query: 452 ARQA*EGVHSLRS 490
A A +G L S
Sbjct: 429 AC*AKKGDRCLIS 467
Score = 121 bits (258), Expect(2) = 6e-035
Identities = 47/80 (58%), Positives = 64/80 (80%)
Frame = -2 / -2
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS LH L+Q LLG++ D+N DVSK +PL++HL H+RGIHKCPVLVD+IDD+ E +I
Sbjct: 297 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 118
Query: 140 VLPVVHQGHAPDLHEPLERH 81
+L VV++ H+P+LHE L+ H
Sbjct: 117 ILAVVNERHSPNLHESLKTH 58
Score = 49.2 bits (101), Expect(2) = 6e-035
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2 / -2
Query: 461 LGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQ 357
L +LLP +T+PL+ QHD EP+K+IE S LL N+
Sbjct: 438 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 334
>emb|BX820403.1|CNS0A7WW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH2ZA05 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 580
Score = 259 bits (559), Expect = 1e-067
Identities = 111/141 (78%), Positives = 125/141 (88%)
Frame = +3 / +2
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A+M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 26 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 205
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIKR
Sbjct: 206 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 385
Query: 435 GAIRQELAKLKKASTA*GVSF 497
G +RQELAKLK+ A* +++
Sbjct: 386 GIVRQELAKLKREIAA*FLNY 448
Score = 182 bits (392), Expect = 1e-044
Identities = 87/136 (63%), Positives = 96/136 (70%)
Frame = -3 / -2
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A + SLASSCL P LLI A+M LNLSKSL ALLF TISFLPHELFSHL FTSA SI
Sbjct: 432 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 253
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ FLGT L+S+ MSV ++ KF W L++SGASTSALFW P*S P* T
Sbjct: 252 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 73
Query: 121 RATRPISTNLLNGILA 74
AT PISTNLL ILA
Sbjct: 72 SATLPISTNLLKPILA 25
Score = 148 bits (318), Expect = 2e-034
Identities = 67/133 (50%), Positives = 87/133 (65%)
Frame = +2 / +1
Query: 92 EVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQT 271
E+RGD G LR GLW +R +RRC RP+QGTCGCP*+G+ P E + ++Y*H+ *+Q
Sbjct: 43 EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQ 222
Query: 272 CPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWCYQAR 451
QE+ D G+G *CE+QVGE+ MG E C EE+S Q* * VQ H G++ EGW +A
Sbjct: 223 SSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQDHVGQNQEGWYCEAG 402
Query: 452 ARQA*EGVHSLRS 490
A A +G L S
Sbjct: 403 AC*AKKGDRCLIS 441
Score = 121 bits (258), Expect(2) = 6e-035
Identities = 47/80 (58%), Positives = 64/80 (80%)
Frame = -2 / -1
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS LH L+Q LLG++ D+N DVSK +PL++HL H+RGIHKCPVLVD+IDD+ E +I
Sbjct: 271 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 92
Query: 140 VLPVVHQGHAPDLHEPLERH 81
+L VV++ H+P+LHE L+ H
Sbjct: 91 ILAVVNERHSPNLHESLKTH 32
Score = 49.2 bits (101), Expect(2) = 6e-035
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2 / -1
Query: 461 LGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQ 357
L +LLP +T+PL+ QHD EP+K+IE S LL N+
Sbjct: 412 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 308
>ref|NM_127604.2| Arabidopsis thaliana structural constituent of ribosome AT2G20450
mRNA, complete cds
Length = 642
Score = 259 bits (559), Expect = 1e-067
Identities = 111/141 (78%), Positives = 125/141 (88%)
Frame = +3 / +1
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A+M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 52 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 231
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIKR
Sbjct: 232 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 411
Query: 435 GAIRQELAKLKKASTA*GVSF 497
G +RQELAKLK+ A* +++
Sbjct: 412 GIVRQELAKLKREIAA*FLNY 474
Score = 182 bits (392), Expect = 1e-044
Identities = 87/136 (63%), Positives = 96/136 (70%)
Frame = -3 / -2
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A + SLASSCL P LLI A+M LNLSKSL ALLF TISFLPHELFSHL FTSA SI
Sbjct: 458 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 279
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ FLGT L+S+ MSV ++ KF W L++SGASTSALFW P*S P* T
Sbjct: 278 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 99
Query: 121 RATRPISTNLLNGILA 74
AT PISTNLL ILA
Sbjct: 98 SATLPISTNLLKPILA 51
Score = 148 bits (318), Expect = 2e-034
Identities = 67/133 (50%), Positives = 87/133 (65%)
Frame = +2 / +3
Query: 92 EVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQT 271
E+RGD G LR GLW +R +RRC RP+QGTCGCP*+G+ P E + ++Y*H+ *+Q
Sbjct: 69 EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQ 248
Query: 272 CPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWCYQAR 451
QE+ D G+G *CE+QVGE+ MG E C EE+S Q* * VQ H G++ EGW +A
Sbjct: 249 SSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQDHVGQNQEGWYCEAG 428
Query: 452 ARQA*EGVHSLRS 490
A A +G L S
Sbjct: 429 AC*AKKGDRCLIS 467
Score = 121 bits (258), Expect(2) = 6e-035
Identities = 47/80 (58%), Positives = 64/80 (80%)
Frame = -2 / -1
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS LH L+Q LLG++ D+N DVSK +PL++HL H+RGIHKCPVLVD+IDD+ E +I
Sbjct: 297 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 118
Query: 140 VLPVVHQGHAPDLHEPLERH 81
+L VV++ H+P+LHE L+ H
Sbjct: 117 ILAVVNERHSPNLHESLKTH 58
Score = 49.2 bits (101), Expect(2) = 6e-035
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2 / -1
Query: 461 LGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQ 357
L +LLP +T+PL+ QHD EP+K+IE S LL N+
Sbjct: 438 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 334
>gb|BE038422.1|BE038422 AA17C08 AA Arabidopsis thaliana cDNA 5' similar to ribosomal
protein l14, mRNA sequence
Length = 647
Score = 258 bits (558), Expect = 1e-067
Identities = 111/137 (81%), Positives = 123/137 (89%)
Frame = +3 / -1
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTDI
Sbjct: 620 AXMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDI 441
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+
Sbjct: 440 VIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKA 261
Query: 435 GAIRQELAKLKKASTA* 485
G +RQELAKLKK TA*
Sbjct: 260 GVVRQELAKLKKEITA* 210
Score = 181 bits (390), Expect = 2e-044
Identities = 87/136 (63%), Positives = 95/136 (69%)
Frame = -3 / +1
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 214 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 393
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW P*S P*FT
Sbjct: 394 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 573
Query: 121 RATRPISTNLLNGILA 74
AT PIST LL I A
Sbjct: 574 SATLPISTYLLKPIXA 621
Score = 109 bits (233), Expect(2) = 6e-030
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -2 / +3
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 375 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 554
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 555 IFSVVHKCYSPDLNVPLETHXR 620
Score = 105 bits (223), Expect(2) = 4e-029
Identities = 48/93 (51%), Positives = 61/93 (65%)
Frame = +2 / -3
Query: 80 DAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD 259
+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 615 NGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYCH 436
Query: 260 *HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 435 *HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 337
Score = 45.5 bits (93), Expect(2) = 4e-029
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / -3
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SF 520
L**VQ H G+D E WC QARA + EG H L + C SF
Sbjct: 303 L**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFCCLSF 175
Score = 43.7 bits (89), Expect(2) = 6e-030
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -1 / +2
Query: 489 LLKLWTPS*AWRALA**HHPS*SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
L++ +PS* +ALA* H S*S P * *TYQS * S + AS PMS SPT
Sbjct: 206 LIRQ*SPS*VLQALA*QHQLS*SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 367
>gb|AV824370.1|AV824370 AV824370 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-68-M06 5',
mRNA sequence
Length = 648
Score = 257 bits (555), Expect = 4e-067
Identities = 110/141 (78%), Positives = 124/141 (87%)
Frame = +3 / +2
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A+M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 53 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 232
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+ML KIKR
Sbjct: 233 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLXKIKRA 412
Query: 435 GAIRQELAKLKKASTA*GVSF 497
G +RQELAKLK+ A* +++
Sbjct: 413 GIVRQELAKLKREIAA*FLNY 475
Score = 180 bits (388), Expect = 4e-044
Identities = 86/136 (63%), Positives = 95/136 (69%)
Frame = -3 / -1
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A + SLASSCL P LLI +M LNLSKSL ALLF TISFLPHELFSHL FTSA SI
Sbjct: 459 AAISLFSLASSCLTIPALLILXNMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 280
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ FLGT L+S+ MSV ++ KF W L++SGASTSALFW P*S P* T
Sbjct: 279 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 100
Query: 121 RATRPISTNLLNGILA 74
AT PISTNLL ILA
Sbjct: 99 SATLPISTNLLKPILA 52
Score = 148 bits (318), Expect = 2e-034
Identities = 67/133 (50%), Positives = 87/133 (65%)
Frame = +2 / +1
Query: 92 EVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQT 271
E+RGD G LR GLW +R +RRC RP+QGTCGCP*+G+ P E + ++Y*H+ *+Q
Sbjct: 70 EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQ 249
Query: 272 CPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWCYQAR 451
QE+ D G+G *CE+QVGE+ MG E C EE+S Q* * VQ H G++ EGW +A
Sbjct: 250 SSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQDHVGQNQEGWYCEAG 429
Query: 452 ARQA*EGVHSLRS 490
A A +G L S
Sbjct: 430 AC*AKKGDRCLIS 468
Score = 121 bits (258), Expect(2) = 4e-035
Identities = 47/80 (58%), Positives = 64/80 (80%)
Frame = -2 / -3
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS LH L+Q LLG++ D+N DVSK +PL++HL H+RGIHKCPVLVD+IDD+ E +I
Sbjct: 298 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 119
Query: 140 VLPVVHQGHAPDLHEPLERH 81
+L VV++ H+P+LHE L+ H
Sbjct: 118 ILAVVNERHSPNLHESLKTH 59
Score = 49.6 bits (102), Expect(2) = 4e-035
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2 / -3
Query: 461 LGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQ 357
L +LLP +T+PL+ QHD EP+K+IE S LL N+
Sbjct: 439 LSKLLPHNTSPLDFXQHDLEPVKIIEGSSSLLHNK 335
>gb|AY050473.1| Arabidopsis thaliana AT4g27090/T24A18_40 mRNA, complete cds
Length = 405
Score = 257 bits (555), Expect = 4e-067
Identities = 110/135 (81%), Positives = 122/135 (90%)
Frame = +3 / +1
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTDI I
Sbjct: 1 MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 180
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+ G
Sbjct: 181 DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 360
Query: 441 IRQELAKLKKASTA* 485
+RQELAKLKK TA*
Sbjct: 361 VRQELAKLKKEITA* 405
Score = 179 bits (385), Expect = 1e-043
Identities = 85/131 (64%), Positives = 93/131 (70%)
Frame = -3 / -2
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 401 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 222
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW P*S P*FT
Sbjct: 221 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 42
Query: 121 RATRPISTNLL 89
AT PIST LL
Sbjct: 41 SATLPISTYLL 9
Score = 108 bits (230), Expect(2) = 3e-029
Identities = 44/80 (55%), Positives = 59/80 (73%)
Frame = -2 / -1
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 240 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 61
Query: 140 VLPVVHQGHAPDLHEPLERH 81
+ VVH+ ++PDL+ PLE H
Sbjct: 60 IFSVVHKCYSPDLNVPLETH 1
Score = 105 bits (223), Expect(2) = 3e-028
Identities = 48/90 (53%), Positives = 60/90 (66%)
Frame = +2 / +3
Query: 89 QEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQ 268
QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y + *HQ
Sbjct: 9 QEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYCH*HQ 188
Query: 269 TCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 189 PCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 278
Score = 42.8 bits (87), Expect(2) = 3e-028
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2 / +3
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSL 484
L**VQ H G+D E WC QARA + EG H L
Sbjct: 312 L**VQDHVGQDQESWCCQARACKTQEGDHCL 404
Score = 42.8 bits (87), Expect(2) = 3e-029
Identities = 28/49 (57%), Positives = 31/49 (63%)
Frame = -1 / -3
Query: 474 TPS*AWRALA**HHPS*SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
+PS* +ALA* H S*S P * *TYQS * S + AS PMS SPT
Sbjct: 394 SPS*VLQALA*QHQLS*SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 248
>gb|CB253512.1|CB253512 95-E018427-019-008-M23-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768M238Q 5-PRIME, mRNA sequence
Length = 611
Score = 256 bits (554), Expect = 5e-067
Identities = 110/141 (78%), Positives = 125/141 (88%)
Frame = +3 / +1
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A+M FKRFVEIGRVALVNYG+DYG+LVVIV+VVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 1 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVNVVDQNRALVDAPDMERIQMNLKRLSLTDI 180
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIKR
Sbjct: 181 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRA 360
Query: 435 GAIRQELAKLKKASTA*GVSF 497
G +RQELAKLK+ A* +++
Sbjct: 361 GIVRQELAKLKREIAA*FLNY 423
Score = 180 bits (387), Expect = 6e-044
Identities = 86/135 (63%), Positives = 95/135 (70%)
Frame = -3 / -1
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A + SLASSCL P LLI A+M LNLSKSL ALLF TISFLPHELFSHL FTSA SI
Sbjct: 407 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 228
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ FLGT L+S+ MSV ++ KF W L++SGASTSALFW P*S P* T
Sbjct: 227 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTLTITTSFP*SSP*LT 48
Query: 121 RATRPISTNLLNGIL 77
AT PISTNLL IL
Sbjct: 47 SATLPISTNLLKPIL 3
Score = 144 bits (310), Expect = 2e-033
Identities = 65/133 (48%), Positives = 87/133 (65%)
Frame = +2 / +3
Query: 92 EVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQT 271
E+RGD G LR GLW +R +R+C RP+QGTCGCP*+G+ P E + ++Y*H+ *+Q
Sbjct: 18 EIRGDWESGAR*LRRGLWKARGYRQCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQ 197
Query: 272 CPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWCYQAR 451
QE+ D G+G *CE+QVGE+ MG E C +E+S Q* * VQ H G++ EGW +A
Sbjct: 198 SSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAKEKSCPQ*F*QVQDHVGQNQEGWYCEAG 377
Query: 452 ARQA*EGVHSLRS 490
A A +G L S
Sbjct: 378 AC*AKKGDRCLIS 416
Score = 121 bits (258), Expect(2) = 6e-035
Identities = 47/80 (58%), Positives = 64/80 (80%)
Frame = -2 / -3
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS LH L+Q LLG++ D+N DVSK +PL++HL H+RGIHKCPVLVD+IDD+ E +I
Sbjct: 246 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 67
Query: 140 VLPVVHQGHAPDLHEPLERH 81
+L VV++ H+P+LHE L+ H
Sbjct: 66 ILAVVNERHSPNLHESLKTH 7
Score = 49.2 bits (101), Expect(2) = 6e-035
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2 / -3
Query: 461 LGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQ 357
L +LLP +T+PL+ QHD EP+K+IE S LL N+
Sbjct: 387 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 283
>gb|AY096618.1| Arabidopsis thaliana putative 60S ribosomal protein L14 (At2g20450)
mRNA, complete cds
Length = 436
Score = 256 bits (553), Expect = 7e-067
Identities = 110/139 (79%), Positives = 123/139 (88%)
Frame = +3 / +1
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI I
Sbjct: 1 MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 180
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIKR G
Sbjct: 181 DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 360
Query: 441 IRQELAKLKKASTA*GVSF 497
+RQELAKLK+ A* +++
Sbjct: 361 VRQELAKLKREIAA*FLNY 417
Score = 177 bits (382), Expect = 3e-043
Identities = 84/131 (64%), Positives = 93/131 (70%)
Frame = -3 / -3
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A + SLASSCL P LLI A+M LNLSKSL ALLF TISFLPHELFSHL FTSA SI
Sbjct: 401 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 222
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ FLGT L+S+ MSV ++ KF W L++SGASTSALFW P*S P* T
Sbjct: 221 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 42
Query: 121 RATRPISTNLL 89
AT PISTNLL
Sbjct: 41 SATLPISTNLL 9
Score = 148 bits (318), Expect = 2e-034
Identities = 67/133 (50%), Positives = 87/133 (65%)
Frame = +2 / +3
Query: 92 EVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQT 271
E+RGD G LR GLW +R +RRC RP+QGTCGCP*+G+ P E + ++Y*H+ *+Q
Sbjct: 12 EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQ 191
Query: 272 CPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWCYQAR 451
QE+ D G+G *CE+QVGE+ MG E C EE+S Q* * VQ H G++ EGW +A
Sbjct: 192 SSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQDHVGQNQEGWYCEAG 371
Query: 452 ARQA*EGVHSLRS 490
A A +G L S
Sbjct: 372 AC*AKKGDRCLIS 410
Score = 121 bits (258), Expect(2) = 6e-035
Identities = 47/80 (58%), Positives = 64/80 (80%)
Frame = -2 / -2
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS LH L+Q LLG++ D+N DVSK +PL++HL H+RGIHKCPVLVD+IDD+ E +I
Sbjct: 240 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 61
Query: 140 VLPVVHQGHAPDLHEPLERH 81
+L VV++ H+P+LHE L+ H
Sbjct: 60 ILAVVNERHSPNLHESLKTH 1
Score = 49.2 bits (101), Expect(2) = 6e-035
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2 / -2
Query: 461 LGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQ 357
L +LLP +T+PL+ QHD EP+K+IE S LL N+
Sbjct: 381 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 277
>emb|AX506868.1| Sequence 1563 from Patent WO0216655
Length = 405
Score = 255 bits (551), Expect = 1e-066
Identities = 110/135 (81%), Positives = 120/135 (88%)
Frame = +3 / +1
Query: 81 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKI 260
M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI I
Sbjct: 1 MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 180
Query: 261 DIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 440
DI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIKR G
Sbjct: 181 DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 360
Query: 441 IRQELAKLKKASTA* 485
+RQELAKLK+ A*
Sbjct: 361 VRQELAKLKREIAA* 405
Score = 177 bits (382), Expect = 3e-043
Identities = 84/131 (64%), Positives = 93/131 (70%)
Frame = -3 / -2
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A + SLASSCL P LLI A+M LNLSKSL ALLF TISFLPHELFSHL FTSA SI
Sbjct: 401 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 222
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ FLGT L+S+ MSV ++ KF W L++SGASTSALFW P*S P* T
Sbjct: 221 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 42
Query: 121 RATRPISTNLL 89
AT PISTNLL
Sbjct: 41 SATLPISTNLL 9
Score = 148 bits (317), Expect = 3e-034
Identities = 63/121 (52%), Positives = 82/121 (67%)
Frame = +2 / +3
Query: 92 EVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQT 271
E+RGD G LR GLW +R +RRC RP+QGTCGCP*+G+ P E + ++Y*H+ *+Q
Sbjct: 12 EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQ 191
Query: 272 CPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWCYQAR 451
QE+ D G+G *CE+QVGE+ MG E C EE+S Q* * VQ H G++ EGW +A
Sbjct: 192 SSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQDHVGQNQEGWYCEAG 371
Query: 452 A 454
A
Sbjct: 372 A 374
Score = 121 bits (258), Expect(2) = 6e-035
Identities = 47/80 (58%), Positives = 64/80 (80%)
Frame = -2 / -1
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS LH L+Q LLG++ D+N DVSK +PL++HL H+RGIHKCPVLVD+IDD+ E +I
Sbjct: 240 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 61
Query: 140 VLPVVHQGHAPDLHEPLERH 81
+L VV++ H+P+LHE L+ H
Sbjct: 60 ILAVVNERHSPNLHESLKTH 1
Score = 49.2 bits (101), Expect(2) = 6e-035
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2 / -1
Query: 461 LGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQ 357
L +LLP +T+PL+ QHD EP+K+IE S LL N+
Sbjct: 381 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 277
>gb|AV821405.1|AV821405 AV821405 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-M12 5',
mRNA sequence
Length = 677
Score = 247 bits (533), Expect = 4e-064
Identities = 106/129 (82%), Positives = 117/129 (90%)
Frame = +3 / +1
Query: 99 VEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKIDIKRVP 278
VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTDI IDI RVP
Sbjct: 85 VEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVP 264
Query: 279 KKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELA 458
KK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+ G +RQELA
Sbjct: 265 KKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELA 444
Query: 459 KLKKASTA* 485
KLKK TA*
Sbjct: 445 KLKKEITA* 471
Score = 176 bits (379), Expect = 7e-043
Identities = 83/128 (64%), Positives = 91/128 (71%)
Frame = -3 / -1
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 467 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 288
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW P*S P*FT
Sbjct: 287 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 108
Query: 121 RATRPIST 98
AT PIST
Sbjct: 107 SATLPIST 84
Score = 99.6 bits (211), Expect(2) = 2e-027
Identities = 46/98 (46%), Positives = 61/98 (62%)
Frame = +2 / +3
Query: 65 HRHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALT 244
+R + + R DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++
Sbjct: 51 YRRLKMGFKRYR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVS 230
Query: 245 Y*HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
Y + *HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 231 YRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 344
Score = 98.7 bits (209), Expect(2) = 1e-026
Identities = 40/74 (54%), Positives = 55/74 (74%)
Frame = -2 / -3
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 306 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 127
Query: 140 VLPVVHQGHAPDLH 99
+ VVH+ ++PDL+
Sbjct: 126 IFSVVHKCYSPDLN 85
Score = 45.5 bits (93), Expect(2) = 2e-027
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SF 520
L**VQ H G+D E WC QARA + EG H L + C SF
Sbjct: 378 L**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFCCLSF 506
Score = 43.7 bits (89), Expect(2) = 1e-026
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -1 / -2
Query: 489 LLKLWTPS*AWRALA**HHPS*SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
L++ +PS* +ALA* H S*S P * *TYQS * S + AS PMS SPT
Sbjct: 475 LIRQ*SPS*VLQALA*QHQLS*SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 314
>gb|BP560955.2|BP560955 BP560955 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-15-J03 5',
mRNA sequence
Length = 617
Score = 247 bits (533), Expect = 4e-064
Identities = 106/129 (82%), Positives = 117/129 (90%)
Frame = +3 / +3
Query: 99 VEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKIDIKRVP 278
VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTDI IDI RVP
Sbjct: 81 VEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVP 260
Query: 279 KKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELA 458
KK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+ G +RQELA
Sbjct: 261 KKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELA 440
Query: 459 KLKKASTA* 485
KLKK TA*
Sbjct: 441 KLKKEITA* 467
Score = 176 bits (379), Expect = 7e-043
Identities = 83/128 (64%), Positives = 91/128 (71%)
Frame = -3 / -2
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 463 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 284
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW P*S P*FT
Sbjct: 283 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 104
Query: 121 RATRPIST 98
AT PIST
Sbjct: 103 SATLPIST 80
Score = 98.7 bits (209), Expect(2) = 2e-026
Identities = 40/74 (54%), Positives = 55/74 (74%)
Frame = -2 / -1
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 302 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 123
Query: 140 VLPVVHQGHAPDLH 99
+ VVH+ ++PDL+
Sbjct: 122 IFSVVHKCYSPDLN 81
Score = 98.7 bits (209), Expect(2) = 2e-026
Identities = 45/87 (51%), Positives = 57/87 (65%)
Frame = +2 / +2
Query: 98 RGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQTCP 277
R DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y + *HQ C
Sbjct: 80 R*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYCH*HQPCA 259
Query: 278 QEDNPDQGDGGS*CEDQVGEQLMGQEA 358
+E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 260 KEEGFDRGNGKG*CEEQVGEKLMG*EA 340
Score = 43.2 bits (88), Expect(2) = 2e-026
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2 / +2
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSL 493
L**VQ H G+D E WC QARA + EG H L +
Sbjct: 374 L**VQDHVGQDQESWCCQARACKTQEGDHCLTQI 475
Score = 42.8 bits (87), Expect(2) = 2e-026
Identities = 28/49 (57%), Positives = 31/49 (63%)
Frame = -1 / -3
Query: 474 TPS*AWRALA**HHPS*SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
+PS* +ALA* H S*S P * *TYQS * S + AS PMS SPT
Sbjct: 456 SPS*VLQALA*QHQLS*SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 310
>gb|CB254828.1|CB254828 58-E018361-019-007-C16-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768C167Q 5-PRIME, mRNA sequence
Length = 541
Score = 245 bits (530), Expect = 1e-063
Identities = 105/137 (76%), Positives = 119/137 (86%)
Frame = +3 / +3
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A M FKR+VEIGRVALVNYG+D+G+LV IV++VD NRALVDAPDM R Q+NFKRLSLTDI
Sbjct: 51 ANMGFKRYVEIGRVALVNYGEDHGKLVAIVNIVDHNRALVDAPDMERIQMNFKRLSLTDI 230
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
IDI RVPKK LI AME+ADVK KWE SSWG+KLI+QKRRA+LN FDRFK+MLAKIK+
Sbjct: 231 VIDINRVPKKKALIDAMEKADVKNKWEKSSWGRKLIMQKRRANLNYFDRFKIMLAKIKKA 410
Query: 435 GAIRQELAKLKKASTA* 485
G +RQELAKLKK TA*
Sbjct: 411 GVVRQELAKLKKEITA* 461
Score = 170 bits (366), Expect = 5e-041
Identities = 83/136 (61%), Positives = 92/136 (67%)
Frame = -3 / -1
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSK L AL F ISFLPHELFSHL FTSA SI
Sbjct: 457 AVISFLSFASSCLTTPAFLILANMILNLSK*LRLALRFCMISFLPHELFSHLFFTSAFSI 278
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST AL W P*S P*FT
Sbjct: 277 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALLWSTMLTIATSFP*SSP*FT 98
Query: 121 RATRPISTNLLNGILA 74
AT PIST LL + A
Sbjct: 97 SATLPISTYLLKPMFA 50
Score = 104 bits (221), Expect(2) = 2e-027
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = -2 / -3
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H +DQ LL DVN ++ K +PLEVHL P HIRGIH+ V+V+++DD DE ++
Sbjct: 296 HISLFHCVDQSLLLWHAVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVVVNNVDDSDELSM 117
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 116 IFSVVHKCYSPDLNVPLETHVR 51
Score = 94.1 bits (199), Expect(2) = 1e-024
Identities = 45/94 (47%), Positives = 59/94 (62%)
Frame = +2 / +2
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E QEVR DR ELR W +RR+R+ P+Q GCP*YG+ P ELQ ++Y +
Sbjct: 53 EHGFQEVR*DRESSTCELRRRSWKARRYRQHC*PQQSFGGCP*YGEDPDELQEVVSYRYC 232
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ +E+ D+ +G *CE+QVGE+LMG EA
Sbjct: 233 H*HQPRAKEEGFDRRNGKG*CEEQVGEKLMG*EA 334
Score = 41.4 bits (84), Expect(2) = 1e-024
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +2 / +2
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SFWL 526
L**VQ H G+D E W QARA + EG H L + C SF +
Sbjct: 368 L**VQDHVGQDQESWSCQARACKTQEGDHCLIKYYLRFCCLSFMI 502
Score = 40.5 bits (82), Expect(2) = 2e-027
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = -2 / -3
Query: 470 LLKLGELLPDSTTPLNLRQHDFEPIKVIE 384
LL+ +LLPD+++ L+L QHD EPIKV++
Sbjct: 446 LLEFCKLLPDNSSFLDLGQHDLEPIKVVK 360
>gb|CK118237.1|CK118237 217i19.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011I19217
5-PRIME, mRNA sequence
Length = 441
Score = 244 bits (527), Expect = 3e-063
Identities = 105/134 (78%), Positives = 118/134 (88%)
Frame = +3 / +3
Query: 96 FVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKIDIKRV 275
FVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI IDI RV
Sbjct: 3 FVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDINRV 182
Query: 276 PKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQEL 455
PKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LND DRFK+MLAKIKR G +RQEL
Sbjct: 183 PKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDXDRFKIMLAKIKRAGIVRQEL 362
Query: 456 AKLKKASTA*GVSF 497
AKLK+ A* +++
Sbjct: 363 AKLKREIAA*FLNY 404
Score = 171 bits (368), Expect = 2e-041
Identities = 81/129 (62%), Positives = 90/129 (69%)
Frame = -3 / -3
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A + SLASSCL P LLI A+M LNLS SL ALLF TISFLPHELFSHL FTSA SI
Sbjct: 388 AAISLFSLASSCLTIPALLILANMILNLSXSLRAALLFCTISFLPHELFSHLFFTSAFSI 209
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ FLGT L+S+ MSV ++ KF W L++SGASTSALFW P*S P* T
Sbjct: 208 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LT 29
Query: 121 RATRPISTN 95
AT PISTN
Sbjct: 28 SATLPISTN 2
Score = 145 bits (312), Expect = 1e-033
Identities = 66/132 (50%), Positives = 86/132 (65%)
Frame = +2 / +2
Query: 95 VRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQTC 274
+RGD G LR GLW +R +RRC RP+QGTCGCP*+G+ P E + ++Y*H+ *+Q
Sbjct: 2 IRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQS 181
Query: 275 PQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWCYQARA 454
QE+ D G+G *CE+QVGE+ MG E C EE+S Q* * VQ H G++ EGW +A A
Sbjct: 182 SQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*X*QVQDHVGQNQEGWYCEAGA 361
Query: 455 RQA*EGVHSLRS 490
A +G L S
Sbjct: 362 C*AKKGDRCLIS 397
Score = 116 bits (247), Expect(2) = 1e-032
Identities = 45/75 (60%), Positives = 61/75 (81%)
Frame = -2 / -2
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS LH L+Q LLG++ D+N DVSK +PL++HL H+RGIHKCPVLVD+IDD+ E +I
Sbjct: 227 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 48
Query: 140 VLPVVHQGHAPDLHE 96
+L VV++ H+P+LHE
Sbjct: 47 ILAVVNERHSPNLHE 3
Score = 46.4 bits (95), Expect(2) = 1e-032
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -2 / -2
Query: 461 LGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQ 357
L +LLP +T+PL+ QHD EP+ +IE S LL N+
Sbjct: 368 LSKLLPHNTSPLDFGQHDLEPVXIIEGSSSLLHNK 264
>gb|AV534837.1|AV534837 AV534837 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB086g02F 3', mRNA sequence
Length = 512
Score = 243 bits (524), Expect = 7e-063
Identities = 104/127 (81%), Positives = 115/127 (90%)
Frame = +3 / -2
Query: 105 IGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKIDIKRVPKK 284
IGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R Q+NFKRLSLTDI IDI RVPKK
Sbjct: 511 IGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKK 332
Query: 285 TTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKL 464
LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+ G +RQELAKL
Sbjct: 331 KALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKL 152
Query: 465 KKASTA* 485
KK TA*
Sbjct: 151 KKEITA* 131
Score = 172 bits (370), Expect = 1e-041
Identities = 81/126 (64%), Positives = 89/126 (70%)
Frame = -3 / +3
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 135 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 314
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW P*S P*FT
Sbjct: 315 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FT 494
Query: 121 RATRPI 104
AT PI
Sbjct: 495 SATLPI 512
Score = 98.2 bits (208), Expect(2) = 5e-027
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +2 / -1
Query: 104 DRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQTCPQE 283
DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y + *HQ C +E
Sbjct: 512 DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYCH*HQPCAKE 333
Query: 284 DNPDQGDGGS*CEDQVGEQLMGQEA 358
+ D+G+G *CE+QVGE+LMG EA
Sbjct: 332 EGFDRGNGKG*CEEQVGEKLMG*EA 258
Score = 96.4 bits (204), Expect(2) = 6e-026
Identities = 39/72 (54%), Positives = 53/72 (73%)
Frame = -2 / +2
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 296 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 475
Query: 140 VLPVVHQGHAPD 105
+ VVH+ ++PD
Sbjct: 476 IFSVVHKCYSPD 511
Score = 45.5 bits (93), Expect(2) = 5e-027
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / -1
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SF 520
L**VQ H G+D E WC QARA + EG H L + C SF
Sbjct: 224 L**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFCCLSF 96
Score = 43.7 bits (89), Expect(2) = 6e-026
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -1 / +1
Query: 489 LLKLWTPS*AWRALA**HHPS*SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
L++ +PS* +ALA* H S*S P * *TYQS * S + AS PMS SPT
Sbjct: 127 LIRQ*SPS*VLQALA*QHQLS*SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 288
>gb|CF651603.1|CF651603 12-L020135-066-001-G03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001G031Q 5-PRIME, mRNA sequence
Length = 397
Score = 230 bits (497), Expect = 4e-059
Identities = 99/130 (76%), Positives = 111/130 (85%)
Frame = +3 / +1
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R
Sbjct: 7 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMER 186
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDF 395
Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDF
Sbjct: 187 IQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDF 366
Query: 396 DRFKVMLAKI 425
DRFK+MLAKI
Sbjct: 367 DRFKIMLAKI 396
Score = 157 bits (337), Expect = 5e-037
Identities = 75/117 (64%), Positives = 82/117 (70%)
Frame = -3 / -3
Query: 424 IFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMSV 245
I A+M LNLSKSL AL F TISFLPHELFSHL FTSA SIA I+ F GTRLMS+ +SV
Sbjct: 395 ILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISV 216
Query: 244 SESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLNGILA 74
++ LKF W L+ISGAST ALFW P*S P*FT AT PIST LL I A
Sbjct: 215 RDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFA 45
Score = 108 bits (231), Expect(2) = 3e-025
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -2 / -2
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 291 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 112
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 111 IFSVVHKCYSPDLNVPLETHFR 46
Score = 107 bits (228), Expect = 5e-022
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +2 / +3
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 48 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYC 227
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 228 H*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 329
Score = 29.0 bits (57), Expect(2) = 3e-025
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = -1 / -1
Query: 426 *SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
*S P * *TYQS * S + AS PMS SPT
Sbjct: 397 *SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 299
>emb|BX826370.1|CNS0A41L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB1ZE11 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 583
Score = 139 bits (299), Expect(2) = 1e-058
Identities = 62/88 (70%), Positives = 70/88 (79%)
Frame = +3 / +1
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVD NRALVDAPDM R
Sbjct: 16 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDHNRALVDAPDMER 195
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIK 299
Q+NFKRLSLTDI IDI RVPKK LI+
Sbjct: 196 IQMNFKRLSLTDIVIDINRVPKKKALIE 279
Score = 109 bits (233), Expect(2) = 1e-058
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +3 / +3
Query: 318 VKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKASTA* 485
VK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+ G +RQELAKLKK TA*
Sbjct: 303 VKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKLKKEITA* 470
Score = 98.2 bits (208), Expect(2) = 2e-040
Identities = 40/75 (53%), Positives = 56/75 (74%)
Frame = -2 / -2
Query: 299 LDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVVHQ 120
LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ V+V+++DD+DE +++ VVH+
Sbjct: 279 LDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVMVNNVDDNDELSMIFSVVHK 100
Query: 119 GHAPDLHEPLERHPR 75
++PDL+ PLE H R
Sbjct: 99 CYSPDLNVPLETHFR 55
Score = 90.4 bits (191), Expect(2) = 2e-040
Identities = 42/58 (72%), Positives = 45/58 (77%)
Frame = -3 / -1
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSAS 308
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA+
Sbjct: 466 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAA 293
Score = 89.0 bits (188), Expect(2) = 8e-024
Identities = 42/81 (51%), Positives = 50/81 (61%)
Frame = -3 / -3
Query: 316 SASSIALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*S 137
S ++ I+ F GTRLMS+ +SV ++ LKF W L+ISGAST AL W P*S
Sbjct: 296 SLFALRSIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALLWSTTSTITTSFP*S 117
Query: 136 FP*FTRATRPISTNLLNGILA 74
P*FT AT PIST LL I A
Sbjct: 116 SP*FTSATLPISTYLLKPIFA 54
Score = 71.6 bits (150), Expect(2) = 1e-022
Identities = 34/74 (45%), Positives = 44/74 (59%)
Frame = +2 / +3
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR P Q GCP*YG+ P ELQ ++Y +
Sbjct: 57 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*P*QSFGGCP*YGEDPDELQEVVSYRYC 236
Query: 257 D*HQTCPQEDNPDQ 298
*HQ C +E+ D+
Sbjct: 237 H*HQPCAKEEGFDR 278
Score = 57.0 bits (118), Expect(2) = 1e-022
Identities = 31/60 (51%), Positives = 35/60 (58%)
Frame = +1 / +1
Query: 319 *RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLKESLS 498
*R SGR AHG S R TLIGS+SCW R R +VLSGKS + RRR + LS
Sbjct: 304 *RTSGRKAHGVGSLSCRNVGLTLTTLIGSRSCWPRSRKLVLSGKSLQNSRRRSLPDQILS 483
Score = 43.7 bits (89), Expect(2) = 8e-024
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -1 / -2
Query: 489 LLKLWTPS*AWRALA**HHPS*SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
L++ +PS* +ALA* H S*S P * *TYQS * S + AS PMS SPT
Sbjct: 474 LIRQ*SPS*VLQALA*QHQLS*SWPT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 313
>gb|BP816684.1|BP816684 BP816684 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-42-L13 5',
mRNA sequence
Length = 407
Score = 225 bits (485), Expect = 2e-057
Identities = 97/130 (74%), Positives = 109/130 (83%)
Frame = +3 / +2
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R
Sbjct: 17 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMER 196
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDF 395
Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LND
Sbjct: 197 IQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDL 376
Query: 396 DRFKVMLAKI 425
DRFK+M AKI
Sbjct: 377 DRFKIMSAKI 406
Score = 156 bits (336), Expect = 6e-037
Identities = 75/117 (64%), Positives = 81/117 (69%)
Frame = -3 / -3
Query: 424 IFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMSV 245
I A M LNLSKSL AL F TISFLPHELFSHL FTSA SIA I+ F GTRLMS+ +SV
Sbjct: 405 ILADMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISV 226
Query: 244 SESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLNGILA 74
++ LKF W L+ISGAST ALFW P*S P*FT AT PIST LL I A
Sbjct: 225 RDNLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFA 55
Score = 108 bits (231), Expect(2) = 2e-024
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -2 / -2
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 301 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 122
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 121 IFSVVHKCYSPDLNVPLETHFR 56
Score = 107 bits (228), Expect = 5e-022
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +2 / +1
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 58 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYC 237
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 238 H*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 339
Score = 26.3 bits (51), Expect(2) = 2e-024
Identities = 18/33 (54%), Positives = 19/33 (57%)
Frame = -1 / -1
Query: 426 *SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
*S P * *TY S * S + AS PMS SPT
Sbjct: 407 *SWPT*S*TYPSR*G*PYVSAR*ASYPMSFSPT 309
>gb|BP866196.1|BP866196 BP866196 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-76-N21 5',
mRNA sequence
Length = 386
Score = 122 bits (260), Expect(2) = 7e-057
Identities = 49/63 (77%), Positives = 55/63 (87%)
Frame = +3 / +3
Query: 258 IDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGG 437
IDI RVPKK LI+AME+ADVK KWE SSWG+K IVQKRRA+LNDFDRFK+MLAKIKR G
Sbjct: 198 IDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKFIVQKRRAALNDFDRFKIMLAKIKRAG 377
Query: 438 AIR 446
+R
Sbjct: 378 IVR 386
Score = 121 bits (259), Expect(2) = 7e-057
Identities = 52/60 (86%), Positives = 56/60 (93%)
Frame = +3 / +2
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A+M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 14 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 193
Score = 94.1 bits (199), Expect(2) = 4e-040
Identities = 44/63 (69%), Positives = 49/63 (77%)
Frame = -3 / -2
Query: 445 LIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRL 266
L P LLI A+M LNLSKSL ALLF TI+FLPHELFSHL FTSA SIA I+ FLGT L
Sbjct: 385 LTIPALLILANMILNLSKSLRAALLFCTINFLPHELFSHLFFTSAFSIASIKTFFLGTLL 206
Query: 265 MSI 257
+S+
Sbjct: 205 ISM 197
Score = 93.6 bits (198), Expect(2) = 4e-040
Identities = 35/58 (60%), Positives = 48/58 (82%)
Frame = -2 / -2
Query: 254 DVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVVHQGHAPDLHEPLERH 81
DVSK +PL++HL H+RGIHKCPVLVD+IDD+ E +I+L VV++ H+P+LHE L+ H
Sbjct: 193 DVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSIILAVVNERHSPNLHESLKTH 20
Score = 81.7 bits (172), Expect(2) = 1e-028
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = +2 / +1
Query: 92 EVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+RGD G LR GLW +R +RRC RP+QGTCGCP*+G+ P E + ++Y*H+
Sbjct: 31 EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HR 195
Score = 76.2 bits (160), Expect(3) = 3e-024
Identities = 35/60 (58%), Positives = 39/60 (65%)
Frame = -3 / -3
Query: 253 MSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLNGILA 74
MSV ++ KF W L++SGASTSALFW P*S P* T AT PISTNLL ILA
Sbjct: 192 MSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLPISTNLLKPILA 13
Score = 67.5 bits (141), Expect(2) = 1e-028
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = +2 / +2
Query: 260 *HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGW 436
*+Q QE+ D G+G *CE+QVGE+ MG E C EE+S Q* * VQ H G++ EGW
Sbjct: 200 *YQQSSQEEGFD*GNGEG*CEEQVGEEFMG*EIYCAEEKSCPQ*F*QVQDHVGQNQEGW 376
Score = 43.2 bits (88), Expect(3) = 3e-024
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = -2 / -1
Query: 446 PDSTTPLNLRQHDFEPIKVIERCSPLLDNQ 357
P +T+PL+ QHD EP+K+IE S LL N+
Sbjct: 386 PHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 297
Score = 32.2 bits (64), Expect(3) = 3e-024
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2 / -1
Query: 320 HISFLHRLDQGCLLGDTFDVN 258
HIS LH L+Q LLG++ D+N
Sbjct: 260 HISLLHCLNQNLLLGNSVDIN 198
>gb|BP853658.1|BP853658 BP853658 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-59-A08 5',
mRNA sequence
Length = 397
Score = 222 bits (480), Expect = 9e-057
Identities = 95/126 (75%), Positives = 107/126 (84%)
Frame = +3 / +3
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R
Sbjct: 15 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMER 194
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDF 395
Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDF
Sbjct: 195 IQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDF 374
Query: 396 DRFKVM 413
DRFK+M
Sbjct: 375 DRFKIM 392
Score = 154 bits (331), Expect = 3e-036
Identities = 74/115 (64%), Positives = 80/115 (69%)
Frame = -3 / -1
Query: 418 ASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMSVSE 239
A M LNLSKSL AL F TISFLPHELFSHL FTSA SIA I+ F GTRLMS+ +SV +
Sbjct: 397 AHMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISVRD 218
Query: 238 SRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLNGILA 74
+ LKF W L+ISGAST ALFW P*S P*FT AT PIST LL I A
Sbjct: 217 NLLKFIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFA 53
Score = 108 bits (231), Expect(2) = 5e-025
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -2 / -3
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 299 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 120
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 119 IFSVVHKCYSPDLNVPLETHFR 54
Score = 107 bits (228), Expect = 5e-022
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +2 / +2
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 56 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYC 235
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 236 H*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 337
Score = 28.1 bits (55), Expect(2) = 5e-025
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = -1 / -2
Query: 417 PA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
P * *TYQS * S + AS PMS SPT
Sbjct: 396 PT*S*TYQSR*G*PYVSAR*ASYPMSFSPT 307
>gb|BP842465.1|BP842465 BP842465 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-54-O16 5',
mRNA sequence
Length = 387
Score = 217 bits (468), Expect = 4e-055
Identities = 92/110 (83%), Positives = 100/110 (90%)
Frame = +3 / +2
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A+M FKRFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 56 AKMGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 235
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRF 404
IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRF
Sbjct: 236 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRF 385
Score = 155 bits (332), Expect = 2e-036
Identities = 73/111 (65%), Positives = 80/111 (72%)
Frame = -3 / -1
Query: 406 LNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMSVSESRLK 227
LNLSKSL ALLF TISFLPHELFSHL FTSA SIA I+ FLGT L+S+ MSV ++ K
Sbjct: 387 LNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSIASIKTFFLGTLLISMTMSVRDNLFK 208
Query: 226 FTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLNGILA 74
F W L++SGASTSALFW P*S P* T AT PISTNLL ILA
Sbjct: 207 FIWILSMSGASTSALFWSTTSTITTSFP*SSP*LTSATLPISTNLLKPILA 55
Score = 130 bits (278), Expect = 6e-029
Identities = 56/105 (53%), Positives = 72/105 (68%)
Frame = +2 / +1
Query: 92 EVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQT 271
E+RGD G LR GLW +R +RRC RP+QGTCGCP*+G+ P E + ++Y*H+ *+Q
Sbjct: 73 EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQ 252
Query: 272 CPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQ 406
QE+ D G+G *CE+QVGE+ MG E C EE+S Q* * VQ
Sbjct: 253 SSQEEGFD*GNGEG*CEEQVGEEFMG*ETYCAEEKSCPQ*F*QVQ 387
Score = 121 bits (258), Expect(2) = 2e-029
Identities = 47/80 (58%), Positives = 64/80 (80%)
Frame = -2 / -3
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS LH L+Q LLG++ D+N DVSK +PL++HL H+RGIHKCPVLVD+IDD+ E +I
Sbjct: 301 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 122
Query: 140 VLPVVHQGHAPDLHEPLERH 81
+L VV++ H+P+LHE L+ H
Sbjct: 121 ILAVVNERHSPNLHESLKTH 62
Score = 30.4 bits (60), Expect(2) = 2e-029
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -1 / -2
Query: 405 *TYQSH*AMLSSSGQSASCPMSCSPT 328
*T Q+H* L SS Q S PM+ SPT
Sbjct: 386 *TCQNH*GQLFSSAQ*VSYPMNSSPT 309
>gb|BP845987.1|BP845987 BP845987 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-95-G23 5',
mRNA sequence
Length = 404
Score = 216 bits (466), Expect = 7e-055
Identities = 94/130 (72%), Positives = 105/130 (80%)
Frame = +3 / +3
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRA VDAPDM R
Sbjct: 15 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMER 194
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDF 395
Q+NFKRLSLTDI IDI RVPKK I+AME+ADVK KWE SSWG+KLIVQKRRA LND
Sbjct: 195 IQMNFKRLSLTDIVIDINRVPKKKAWIEAMEKADVKNKWEKSSWGRKLIVQKRRAKLNDL 374
Query: 396 DRFKVMLAKI 425
DRFK+M KI
Sbjct: 375 DRFKIMWDKI 404
Score = 156 bits (336), Expect = 6e-037
Identities = 75/117 (64%), Positives = 82/117 (70%)
Frame = -3 / -2
Query: 424 IFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMSV 245
I + M LNLSKSLS AL F TISFLPHELFSHL FTSA SIA I+ F GTRLMS+ +SV
Sbjct: 403 ILSHMILNLSKSLSLALRFCTISFLPHELFSHLFFTSAFSIASIQAFFFGTRLMSMTISV 224
Query: 244 SESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLNGILA 74
++ LKF W L+ISGAST ALFW P*S P*FT AT PIST LL I A
Sbjct: 223 RDNLLKFIWILSISGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFA 53
Score = 108 bits (230), Expect = 3e-022
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +2 / +2
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 56 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSLGGCP*YGEDPDELQEVVSYRYC 235
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 236 H*HQPCAKEEGLDRGNGKG*CEEQVGEKLMG*EA 337
Score = 105 bits (223), Expect(2) = 2e-023
Identities = 44/82 (53%), Positives = 58/82 (70%)
Frame = -2 / -1
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LD LL T DVN ++ K +PLEVHL P HIRGIH VLV+++DD+DE ++
Sbjct: 299 HISLFHCLDPSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHPSSVLVNNVDDNDELSM 120
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 119 IFSVVHKCYSPDLNVPLETHFR 54
Score = 26.7 bits (52), Expect(2) = 2e-023
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = -1 / -3
Query: 423 SSPA*L*TYQSH*AMLSSSGQSASCPMSCSPT 328
S P * *TY S * S + AS PMS SPT
Sbjct: 402 SCPT*S*TYPSR*V*PYVSAR*ASYPMSFSPT 307
>gb|BP800136.1|BP800136 BP800136 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-14-A17 5',
mRNA sequence
Length = 408
Score = 204 bits (441), Expect(2) = 1e-053
Identities = 86/108 (79%), Positives = 97/108 (89%)
Frame = +3 / +1
Query: 108 GRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKIDIKRVPKKT 287
G +ALVNYG+ +G+LVVIVDVVDQ RALVDAPDM R Q+NFKRLSLTDI IDI RVPKK
Sbjct: 85 GELALVNYGEHHGKLVVIVDVVDQKRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKK 264
Query: 288 TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 431
LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+
Sbjct: 265 ALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 408
Score = 144 bits (308), Expect(2) = 3e-033
Identities = 67/107 (62%), Positives = 75/107 (70%)
Frame = -3 / -2
Query: 427 LIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMS 248
LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SIA I+ F GTRLMS+ +S
Sbjct: 404 LILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTIS 225
Query: 247 VSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRP 107
V ++ LKF W L+ISGAST ALFW P* P*FT A+ P
Sbjct: 224 VRDNLLKFIWILSISGASTKALFWSTTSTITTSFP*CSP*FTSASSP 84
Score = 27.6 bits (54), Expect(2) = 1e-053
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3 / +3
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVA 119
H L + A+M FKR+VEIGR +
Sbjct: 12 HLHSELRPSNLPAAKMGFKRYVEIGRAS 95
Score = 21.7 bits (41), Expect(2) = 3e-033
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / -2
Query: 113 APDLHEPLERHPR 75
+PDL+ PLE H R
Sbjct: 89 SPDLNVPLETHFR 51
>gb|BP843574.1|BP843574 BP843574 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-87-E19 5',
mRNA sequence
Length = 385
Score = 211 bits (455), Expect = 2e-053
Identities = 91/122 (74%), Positives = 102/122 (83%)
Frame = +3 / +3
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R
Sbjct: 15 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMER 194
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDF 395
Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LND
Sbjct: 195 IQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDL 374
Query: 396 DR 401
DR
Sbjct: 375 DR 380
Score = 149 bits (319), Expect = 1e-034
Identities = 71/111 (63%), Positives = 78/111 (70%)
Frame = -3 / -1
Query: 406 LNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMSVSESRLK 227
L+LSKSL AL F TISFLPHELFSHL FTSA SIA I+ F GTRLMS+ +SV ++ LK
Sbjct: 385 LDLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISVRDNLLK 206
Query: 226 FTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLNGILA 74
F W L+ISGAST ALFW P*S P*FT AT PIST LL I A
Sbjct: 205 FIWILSISGASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFA 53
Score = 108 bits (231), Expect(2) = 3e-023
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -2 / -3
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+++DD+DE ++
Sbjct: 299 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNNVDDNDELSM 120
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 119 IFSVVHKCYSPDLNVPLETHFR 54
Score = 107 bits (228), Expect = 5e-022
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +2 / +2
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 56 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPDELQEVVSYRYC 235
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 236 H*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 337
Score = 22.1 bits (42), Expect(2) = 3e-023
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1 / -2
Query: 402 TYQSH*AMLSSSGQSASCPMSCSPT 328
TY S * S + AS PMS SPT
Sbjct: 381 TYPSR*G*PYVSAR*ASYPMSFSPT 307
>emb|BX818834.1|CNS0A8VC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB17ZH01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 586
Score = 211 bits (455), Expect = 2e-053
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = +3 / +2
Query: 87 FKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKIDI 266
FKRFV IG VALVNYG+DYG+LVVIVDVVDQNRALVDAP M + Q+NFKR LTDI I I
Sbjct: 5 FKRFVGIGGVALVNYGEDYGKLVVIVDVVDQNRALVDAP*MEKIQMNFKRFFLTDIVIYI 184
Query: 267 KRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIR 446
RVPKK I AME+ADVK KWE SSWG+KLI QK+RA+LNDFDRFK+MLAKIKR G +R
Sbjct: 185 NRVPKKKVFI*AMEKADVKNKWEKSSWGRKLIFQKKRAALNDFDRFKIMLAKIKRAGILR 364
Query: 447 QELAKLKK 470
KK
Sbjct: 365 TGAC*AKK 388
Score = 147 bits (315), Expect = 5e-034
Identities = 74/127 (58%), Positives = 83/127 (65%)
Frame = -3 / -2
Query: 469 FLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIR 290
FL+ + L P LLI A+M LNLSKSL AL F ISFLPHELFSHL TSA SIA I+
Sbjct: 387 FLA*QAPVLKIPALLILANMILNLSKSLRAALFF*KISFLPHELFSHLFLTSAFSIA*IK 208
Query: 289 VVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATR 110
FLGT L+ + MSV ++ LKF W +I GASTSALFW P*S P* T AT
Sbjct: 207 TFFLGTLLI*MTMSVRKNLLKFIWIFSI*GASTSALFWSTTSTITTSFP*SSP*LTSATP 28
Query: 109 PISTNLL 89
PI TNLL
Sbjct: 27 PIPTNLL 7
Score = 123 bits (264), Expect = 5e-027
Identities = 57/127 (44%), Positives = 77/127 (60%)
Frame = +2 / +1
Query: 92 EVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQT 271
E+RGD G LR GLW +R +RRC P+QGTCGCP G+ P E +Y*H+ +Q
Sbjct: 10 EIRGDWGSGAR*LRRGLWKARGYRRCS*PKQGTCGCPLNGENPDEF*EVFSY*HRHLYQQ 189
Query: 272 CPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWCYQAR 451
QE+ G+G *C +QVG++ MG E EE+S Q* * VQ H G++ EGW ++ R
Sbjct: 190 SSQEEGFYLGNGEG*C*EQVGKEFMG*ETYFSEEKSCPQ*F*QVQDHVGQNQEGWYFEDR 369
Query: 452 ARQA*EG 472
+*+G
Sbjct: 370 GLLS*KG 390
Score = 104 bits (222), Expect(2) = 1e-028
Identities = 42/78 (53%), Positives = 62/78 (79%)
Frame = -2 / -1
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
+IS LH L++ LLG++ D+N DVSK +PL++HL H+RGIHKCPVLV++IDD+ E +I
Sbjct: 238 NISLLHCLNKNLLLGNSVDINDDVSKKKPLKIHLDFLHLRGIHKCPVLVNYIDDNHELSI 59
Query: 140 VLPVVHQGHAPDLHEPLE 87
+L VV++ H+P+ HE L+
Sbjct: 58 ILAVVNERHSPNPHESLK 5
Score = 44.1 bits (90), Expect(2) = 1e-028
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -2 / -1
Query: 470 LLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQ 357
L L P +T+PL+ QHD EP+K+IE S LL N+
Sbjct: 388 LFSLASPCPQNTSPLDFGQHDLEPVKIIEGSSFLLKNK 275
>gb|BP863509.1|BP863509 BP863509 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-66-P15 5',
mRNA sequence
Length = 407
Score = 122 bits (260), Expect(2) = 9e-053
Identities = 54/77 (70%), Positives = 62/77 (80%)
Frame = +3 / +3
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRA VDAPDM R
Sbjct: 12 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMER 191
Query: 216 CQVNFKRLSLTDIKIDI 266
++NFKRLSLTDI IDI
Sbjct: 192 IKMNFKRLSLTDIVIDI 242
Score = 107 bits (229), Expect(2) = 9e-053
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +3 / +2
Query: 270 RVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 431
RVPKK LI+ ME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+MLAKIK+
Sbjct: 245 RVPKKKALIEEMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 406
Score = 84.0 bits (177), Expect(2) = 1e-033
Identities = 34/64 (53%), Positives = 48/64 (75%)
Frame = -2 / -1
Query: 266 DVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVVHQGHAPDLHEPLE 87
DV ++ K +PLEVHL P HIRGIH VLV+++DD+DE +++ VVH+ ++PDL+ PLE
Sbjct: 242 DVYDNIGKRQPLEVHLDPLHIRGIHPSSVLVNNVDDNDELSMIFSVVHKCYSPDLNVPLE 63
Query: 86 RHPR 75
H R
Sbjct: 62 THFR 51
Score = 81.7 bits (172), Expect(2) = 1e-033
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = -3 / -3
Query: 427 LIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTR 269
LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI+ I+ F GTR
Sbjct: 402 LILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSISSIKAFFFGTR 244
>gb|BP860997.1|BP860997 BP860997 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-45-P07 5',
mRNA sequence
Length = 374
Score = 206 bits (444), Expect = 8e-052
Identities = 89/120 (74%), Positives = 100/120 (83%)
Frame = +3 / +2
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRA VDAPDM R
Sbjct: 14 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMER 193
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDF 395
Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDF
Sbjct: 194 IQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDF 373
Score = 143 bits (306), Expect = 9e-033
Identities = 68/107 (63%), Positives = 74/107 (69%)
Frame = -3 / -3
Query: 394 KSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMSVSESRLKFTWH 215
KSL AL F TISFLPHELFSHL FTSA SIA I+ F GTRLMS+ +SV ++ LKF W
Sbjct: 372 KSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISVRDNLLKFIWI 193
Query: 214 LTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLNGILA 74
L+ISGAST ALFW P*S P*FT AT PIST LL I A
Sbjct: 192 LSISGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFA 52
Score = 107 bits (229), Expect = 4e-022
Identities = 45/82 (54%), Positives = 59/82 (71%)
Frame = -2 / -2
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH VLV+++DD+DE ++
Sbjct: 298 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHPSSVLVNNVDDNDELSM 119
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 118 IFSVVHKCYSPDLNVPLETHFR 53
Score = 107 bits (229), Expect = 4e-022
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +2 / +1
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 55 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSLGGCP*YGEDPDELQEVVSYRYC 234
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 235 H*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 336
>gb|BP845942.1|BP845942 BP845942 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-95-E19 5',
mRNA sequence
Length = 407
Score = 138 bits (295), Expect(2) = 2e-051
Identities = 58/73 (79%), Positives = 64/73 (87%)
Frame = +3 / +3
Query: 207 MVRCQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASL 386
M R Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+L
Sbjct: 189 MERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANL 368
Query: 387 NDFDRFKVMLAKI 425
NDFDRFK+M AKI
Sbjct: 369 NDFDRFKIMWAKI 407
Score = 104 bits (222), Expect(2) = 9e-033
Identities = 49/73 (67%), Positives = 55/73 (75%)
Frame = -3 / -2
Query: 424 IFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMSV 245
I A M LNLSKSL AL F TISFLPHELFSHL FTSA SIA I+ F GTRLMS+ +SV
Sbjct: 406 ILAHMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISV 227
Query: 244 SESRLKFTWHLTI 206
++ LKF W L+I
Sbjct: 226 RDNLLKFIWILSI 188
Score = 87.2 bits (184), Expect(2) = 2e-051
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +3 / +2
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAP 203
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRA VDAP
Sbjct: 17 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAP 184
Score = 58.3 bits (121), Expect(2) = 9e-033
Identities = 22/43 (51%), Positives = 33/43 (76%)
Frame = -2 / -2
Query: 203 RGIHKCPVLVDHIDDDDETAIVLPVVHQGHAPDLHEPLERHPR 75
RGIH VLV+++DD+DE +++ VVH+ ++PDL+ PLE H R
Sbjct: 184 RGIHPSSVLVNNVDDNDELSMIFSVVHKCYSPDLNVPLETHFR 56
>gb|BP843110.1|BP843110 BP843110 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-56-P11 5',
mRNA sequence
Length = 396
Score = 204 bits (439), Expect = 4e-051
Identities = 87/112 (77%), Positives = 98/112 (87%)
Frame = +3 / +2
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A+M FKR+VEIGRVALVN G+D+G+LVVIVDVVDQNRA VDAPDM R Q+NFKRLSLTDI
Sbjct: 59 AKMGFKRYVEIGRVALVN*GEDHGKLVVIVDVVDQNRAWVDAPDMERIQMNFKRLSLTDI 238
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKV 410
IDI RVPKK I+A E+ADVK KWE SSWG+KLIVQKRRA+LND DRFK+
Sbjct: 239 VIDINRVPKKKAWIEAREKADVKNKWEKSSWGRKLIVQKRRANLNDLDRFKI 394
Score = 151 bits (325), Expect = 2e-035
Identities = 72/113 (63%), Positives = 79/113 (69%)
Frame = -3 / -1
Query: 412 MTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMSVSESR 233
M LNLSKSL AL F TISFLPHELFSHL FTSA S+A I+ F GTRLMS+ +SV ++
Sbjct: 396 MILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSLASIQAFFFGTRLMSMTISVRDNL 217
Query: 232 LKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLNGILA 74
LKF W L+ISGAST ALFW P*S P*FT AT PIST LL I A
Sbjct: 216 LKFIWILSISGASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFA 58
Score = 104 bits (221), Expect = 5e-021
Identities = 48/94 (51%), Positives = 60/94 (63%)
Frame = +2 / +1
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR EL W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 61 ENGFQEVR*DRESSTCELGRRSWKARRYRRRC*PEQSLGGCP*YGEDPDELQEVVSYRYC 240
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G G *CE+QVGE+LMG EA
Sbjct: 241 H*HQPCAKEEGLDRGKGKG*CEEQVGEKLMG*EA 342
>gb|BP847862.1|BP847862 BP847862 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-03-G07 5',
mRNA sequence
Length = 393
Score = 180 bits (387), Expect(2) = 6e-051
Identities = 75/100 (75%), Positives = 87/100 (87%)
Frame = +3 / +2
Query: 135 KDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEA 314
+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI IDI RVPKK I+AME+A
Sbjct: 80 EDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDINRVPKKKVWIEAMEKA 259
Query: 315 DVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 434
DVK KWE SSWG+KL+V+KRRA+LNDFDRFK+ML + + G
Sbjct: 260 DVKNKWEKSSWGRKLMVKKRRAALNDFDRFKIMLGQNQEG 379
Score = 132 bits (282), Expect(2) = 5e-033
Identities = 61/99 (61%), Positives = 70/99 (70%)
Frame = -3 / -1
Query: 433 PLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSIL 254
P + SM LNLSKSL ALLF+TISFLPHELFSHL FTSA SIA I+ FLGT L+S+
Sbjct: 378 PS*FWPSMILNLSKSLRAALLFFTISFLPHELFSHLFFTSAFSIASIQTFFLGTLLISMT 199
Query: 253 MSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*S 137
MSV ++ KF W L++SGASTSALFW P*S
Sbjct: 198 MSVRDNLFKFIWILSMSGASTSALFWSTTSTITTSFP*S 82
Score = 117 bits (251), Expect = 3e-025
Identities = 50/93 (53%), Positives = 65/93 (69%)
Frame = +2 / +1
Query: 137 GLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQTCPQEDNPDQGDGGS* 316
GLW +R +RRC RP+QGTCGCP*+G+ P E + ++Y*H+ *+Q QE+ D G+G *
Sbjct: 82 GLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQSSQEEGLD*GNGEG* 261
Query: 317 CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHA 415
CE+QVGE+ MG E EE+S Q* * VQ HA
Sbjct: 262 CEEQVGEEFMG*ETYGEEEKSCPQ*F*QVQDHA 360
Score = 94.1 bits (199), Expect(3) = 3e-024
Identities = 37/62 (59%), Positives = 49/62 (79%)
Frame = -2 / -3
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS LH L+ LLG++ D+N DVSK +PL++HL H+RGIHKCPVLVD+IDD+ E +I
Sbjct: 265 HISLLHCLNPNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSI 86
Query: 140 VL 135
+L
Sbjct: 85 IL 80
Score = 43.7 bits (89), Expect(2) = 6e-051
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3 / +1
Query: 75 ARMPFKRFVEIGRVALVNYGK 137
A+M FKRFVE+GRVALVNYG+
Sbjct: 19 AKMGFKRFVEMGRVALVNYGR 81
Score = 31.8 bits (63), Expect(2) = 5e-033
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -3 / -2
Query: 133 P*FTRATRPISTNLLNGILA 74
P* T AT PISTNLL ILA
Sbjct: 77 P*LTSATLPISTNLLKPILA 18
Score = 30.9 bits (61), Expect(3) = 3e-024
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2 / -3
Query: 428 LNLRQHDFEPIKVIERCSPLLDNQ 357
L L +HD EP+K+IE S LL ++
Sbjct: 373 LILAEHDLEPVKIIEGSSSLLHHK 302
Score = 26.7 bits (52), Expect(3) = 3e-024
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 131 VVHQGHAPDLHEPLERH 81
VV++ H+P LHE L+ H
Sbjct: 75 VVNERHSPHLHESLKTH 25
>gb|BP864372.1|BP864372 BP864372 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-70-A16 5',
mRNA sequence
Length = 389
Score = 114 bits (243), Expect(2) = 8e-051
Identities = 50/75 (66%), Positives = 59/75 (78%)
Frame = +3 / +3
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRA VDAPDM R
Sbjct: 12 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMER 191
Query: 216 CQVNFKRLSLTDIKI 260
Q+NFKRLSLT + +
Sbjct: 192 IQMNFKRLSLTILSL 236
Score = 109 bits (232), Expect(2) = 8e-051
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = +3 / +2
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVM 413
DI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFDRFK+M
Sbjct: 224 DIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIM 388
Score = 85.4 bits (180), Expect(2) = 1e-033
Identities = 40/55 (72%), Positives = 43/55 (78%)
Frame = -3 / -3
Query: 412 MTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMS 248
M LNLSKSL AL F TISFLPHELFSHL FTSA SIA I+ F GTRLMS+ +S
Sbjct: 387 MILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTIS 223
Score = 80.3 bits (169), Expect(2) = 1e-033
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = -2 / -1
Query: 245 K*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVVHQGHAPDLHEPLERHPR 75
K +PLEVHL P HIRGIH VLV+++DD+DE +++ VVH+ ++PDL+ PLE H R
Sbjct: 221 KRQPLEVHLDPLHIRGIHPSSVLVNNVDDNDELSMIFSVVHKCYSPDLNVPLETHFR 51
>gb|BP827263.1|BP827263 BP827263 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-74-O20 5',
mRNA sequence
Length = 381
Score = 201 bits (433), Expect = 3e-050
Identities = 87/119 (73%), Positives = 99/119 (83%)
Frame = +3 / +1
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVN+G+D+G+LVVIVDVVDQNRALVDAPDM R
Sbjct: 19 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNHGEDHGKLVVIVDVVDQNRALVDAPDMER 198
Query: 216 CQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLND 392
Q+NFKRLSLTDI IDI RVPKK I+AME+ADVK KWE SSWG+KLIVQKRRA+LND
Sbjct: 199 IQMNFKRLSLTDIVIDINRVPKKKAWIEAMEKADVKNKWEKSSWGRKLIVQKRRANLND 375
Score = 138 bits (295), Expect = 3e-031
Identities = 66/106 (62%), Positives = 72/106 (67%)
Frame = -3 / -2
Query: 391 SLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMSVSESRLKFTWHL 212
SL AL F TISFLPHELFSHL FTSA SIA I+ F GTRLMS+ +SV ++ LKF W L
Sbjct: 374 SLRLALRFCTISFLPHELFSHLFFTSAFSIASIQAFFFGTRLMSMTISVRDNLLKFIWIL 195
Query: 211 TISGASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLNGILA 74
+ISGAST ALFW P*S P FT AT PIST LL I A
Sbjct: 194 SISGASTKALFWSTTSTITTSFP*SSPWFTSATLPISTYLLKPIFA 57
Score = 109 bits (233), Expect = 1e-022
Identities = 45/82 (54%), Positives = 59/82 (71%)
Frame = -2 / -1
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LD LL T DVN ++ K +PLEVHL P HIRGIH+ VLV+H+DD+DE ++
Sbjct: 303 HISLFHCLDPSLLLWHTIDVNDNIGKRQPLEVHLDPLHIRGIHQSSVLVNHVDDNDELSM 124
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDL+ PLE H R
Sbjct: 123 IFSVVHKCYSPDLNVPLETHFR 58
Score = 109 bits (233), Expect = 1e-022
Identities = 49/94 (52%), Positives = 63/94 (67%)
Frame = +2 / +3
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR E R W +RR+RR G PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 60 ENGFQEVR*DRESSTCEPRRRSWKARRYRRRG*PEQSFGGCP*YGEDPDELQEVVSYRYC 239
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ+C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 240 H*HQSCAKEEGLDRGNGKG*CEEQVGEKLMG*EA 341
>gb|AV531951.1|AV531951 AV531951 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB033c09F 3', mRNA sequence
Length = 476
Score = 198 bits (427), Expect = 2e-049
Identities = 85/105 (80%), Positives = 93/105 (88%)
Frame = +3 / -2
Query: 171 VDQNRALVDAPDMVRCQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWG 350
VDQNRALVDAPDM R Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG
Sbjct: 475 VDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWG 296
Query: 351 KKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKASTA* 485
+KLIVQKRRA+LNDFDRFK+MLAKIK+ G +RQELAKLKK TA*
Sbjct: 295 RKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKLKKEITA* 161
Score = 152 bits (326), Expect = 1e-035
Identities = 70/102 (68%), Positives = 78/102 (76%)
Frame = -3 / +3
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 165 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 344
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFW 176
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW
Sbjct: 345 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFW 470
Score = 80.8 bits (170), Expect(2) = 7e-022
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +2 / -1
Query: 176 PEQGTCGCP*YGQVPGELQAALTY*HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQE 355
PEQ GCP*YG+ P ELQ ++Y + *HQ C +E+ D+G+G *CE+QVGE+LMG E
Sbjct: 470 PEQSFGGCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*E 291
Query: 356 A 358
A
Sbjct: 290 A 288
Score = 45.5 bits (93), Expect(2) = 7e-022
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / -1
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SF 520
L**VQ H G+D E WC QARA + EG H L + C SF
Sbjct: 254 L**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFCCLSF 126
>gb|BP586511.1|BP586511 BP586511 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-06-J22 3',
mRNA sequence
Length = 445
Score = 198 bits (427), Expect = 2e-049
Identities = 85/105 (80%), Positives = 93/105 (88%)
Frame = +3 / -2
Query: 171 VDQNRALVDAPDMVRCQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWG 350
VDQNRALVDAPDM R Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG
Sbjct: 444 VDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWG 265
Query: 351 KKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKASTA* 485
+KLIVQKRRA+LNDFDRFK+MLAKIK+ G +RQELAKLKK TA*
Sbjct: 264 RKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKLKKEITA* 130
Score = 152 bits (326), Expect = 1e-035
Identities = 70/102 (68%), Positives = 78/102 (76%)
Frame = -3 / +2
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 134 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 313
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFW 176
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW
Sbjct: 314 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFW 439
Score = 80.8 bits (170), Expect(2) = 7e-022
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +2 / -1
Query: 176 PEQGTCGCP*YGQVPGELQAALTY*HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQE 355
PEQ GCP*YG+ P ELQ ++Y + *HQ C +E+ D+G+G *CE+QVGE+LMG E
Sbjct: 439 PEQSFGGCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*E 260
Query: 356 A 358
A
Sbjct: 259 A 257
Score = 45.5 bits (93), Expect(2) = 7e-022
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / -1
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SF 520
L**VQ H G+D E WC QARA + EG H L + C SF
Sbjct: 223 L**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFCCLSF 95
>gb|BP864490.1|BP864490 BP864490 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-70-G16 5',
mRNA sequence
Length = 384
Score = 198 bits (426), Expect = 2e-049
Identities = 84/107 (78%), Positives = 95/107 (88%)
Frame = +3 / +1
Query: 66 TATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSL 245
+ A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRA VDAPDM R Q+NFKRLSL
Sbjct: 46 STAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMERIQMNFKRLSL 225
Query: 246 TDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASL 386
TDI IDI RVPKK LI+AME+ADVK KWE SSWG+KLIVQKRRA+L
Sbjct: 226 TDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRATL 366
Score = 139 bits (298), Expect = 1e-031
Identities = 65/102 (63%), Positives = 71/102 (69%)
Frame = -3 / -2
Query: 379 ALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMSVSESRLKFTWHLTISG 200
AL F TISFLPHELFSHL FTSA SIA I+ F GTRLMS+ +SV ++ LKF W L+ISG
Sbjct: 359 ALRFCTISFLPHELFSHLFFTSAFSIASIKAFFFGTRLMSMTISVRDNLLKFIWILSISG 180
Query: 199 ASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLNGILA 74
AST ALFW P*S P*FT AT PIST LL I A
Sbjct: 179 ASTQALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFA 54
Score = 112 bits (239), Expect = 1e-023
Identities = 50/94 (53%), Positives = 63/94 (67%)
Frame = +2 / +3
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVRGDR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 57 ENGFQEVRGDRESSTCELRRRSWKARRYRRRC*PEQSLGGCP*YGEDPDELQEVVSYRYC 236
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *CE+QVGE+LMG EA
Sbjct: 237 H*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*EA 338
Score = 111 bits (236), Expect = 4e-023
Identities = 46/82 (56%), Positives = 59/82 (71%)
Frame = -2 / -1
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAI 141
HIS H LDQ LL T DVN ++ K +PLEVHL P HIRGIH VLV+++DD+DE ++
Sbjct: 300 HISLFHCLDQSLLLWHTVDVNDNIGKRQPLEVHLDPLHIRGIHPSSVLVNNVDDNDELSM 121
Query: 140 VLPVVHQGHAPDLHEPLERHPR 75
+ VVH+ ++PDLH PLE H R
Sbjct: 120 IFSVVHKCYSPDLHVPLETHFR 55
>gb|BP856452.1|BP856452 BP856452 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-30-A19 5',
mRNA sequence
Length = 415
Score = 138 bits (296), Expect(3) = 4e-049
Identities = 57/73 (78%), Positives = 64/73 (87%)
Frame = +3 / +1
Query: 219 QVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFD 398
Q+NFKRLSLTDI IDI RVPKK I+AME+ADVK KWE SSWG+KLIVQKRRA+LNDFD
Sbjct: 193 QMNFKRLSLTDIVIDINRVPKKKASIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFD 372
Query: 399 RFKVMLAKIKRGG 437
RFK+MLA IK+ G
Sbjct: 373 RFKIMLANIKKAG 411
Score = 98.7 bits (209), Expect(3) = 7e-029
Identities = 46/71 (64%), Positives = 52/71 (73%)
Frame = -3 / -3
Query: 436 PPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSI 257
P + A+M LNLSKSL AL F TISFLPHELFSHL FTSA SIA I F GTRLMS+
Sbjct: 410 PAFFMLANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSIASIEAFFFGTRLMSM 231
Query: 256 LMSVSESRLKF 224
+SV ++ LKF
Sbjct: 230 TISVRDNLLKF 198
Score = 69.3 bits (145), Expect(3) = 4e-049
Identities = 28/35 (80%), Positives = 34/35 (97%)
Frame = +3 / +3
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQ 179
A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVD+
Sbjct: 51 AKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDR 155
Score = 45.5 bits (93), Expect(3) = 7e-029
Identities = 16/34 (47%), Positives = 27/34 (79%)
Frame = -2 / -3
Query: 176 VDHIDDDDETAIVLPVVHQGHAPDLHEPLERHPR 75
V+++DD+DE +++ VVH+ ++PDL+ PLE H R
Sbjct: 152 VNNVDDNDELSMIFSVVHKCYSPDLNVPLETHFR 51
Score = 28.1 bits (55), Expect(3) = 4e-049
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 177 QNRALVDAPDMVR 215
QNR LVDAPDM R
Sbjct: 152 QNRGLVDAPDMER 190
Score = 23.5 bits (45), Expect(3) = 7e-029
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 215 PDHIRGIHKCPVL 177
P HIRGIH+ VL
Sbjct: 190 PLHIRGIHQTSVL 152
>gb|BP586216.1|BP586216 BP586216 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-05-H08 3',
mRNA sequence
Length = 465
Score = 194 bits (418), Expect = 3e-048
Identities = 83/110 (75%), Positives = 95/110 (86%)
Frame = +3 / -1
Query: 168 VVDQNRALVDAPDMVRCQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSW 347
VVDQNRALVDAPDM R Q+N KRLSLTDI IDI RVPKK LI+AME+AD+K KWE SSW
Sbjct: 462 VVDQNRALVDAPDMERIQMNLKRLSLTDIVIDINRVPKKKVLIEAMEKADLKNKWEKSSW 283
Query: 348 GKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKASTA*GVSF 497
G+KLIVQKRRA+LNDFDRFK+MLAKIKR G +RQELAKLK+ A* +++
Sbjct: 282 GRKLIVQKRRAALNDFDRFKIMLAKIKRAGIVRQELAKLKREIAA*FLNY 133
Score = 147 bits (315), Expect = 5e-034
Identities = 68/102 (66%), Positives = 77/102 (75%)
Frame = -3 / +2
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A + SLASSCL P LLI A+M LNLSKSL ALLF TISFLPHELFSHL F SA SI
Sbjct: 149 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFKSAFSI 328
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFW 176
A I+ FLGT L+S+ MSV ++ KF W L++SGASTSALFW
Sbjct: 329 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFW 454
Score = 114 bits (243), Expect = 4e-024
Identities = 53/108 (49%), Positives = 70/108 (64%)
Frame = +2 / -3
Query: 167 CGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLM 346
C RP+QGTCGCP*+G+ P E + ++Y*H+ *+Q QE+ D G+G * E+QVGE+ M
Sbjct: 463 CSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQSSQEEGFD*GNGEG*FEEQVGEEFM 284
Query: 347 GQEADCPEEESIAQ*L**VQSHAGED*EGWCYQARARQA*EGVHSLRS 490
G E C EE+S Q* * VQ H G++ EGW +A A A +G L S
Sbjct: 283 G*ETYCAEEKSCPQ*F*QVQDHVGQNQEGWYCEAGAC*AKKGDRCLIS 140
Score = 79.0 bits (166), Expect(2) = 2e-022
Identities = 31/51 (60%), Positives = 41/51 (80%)
Frame = -2 / +1
Query: 317 ISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHI 165
IS LH L+Q LLG++ D+N DVSK +PL++HL H+RGIHKCPVLVD++
Sbjct: 313 ISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYM 465
Score = 49.2 bits (101), Expect(2) = 2e-022
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2 / +1
Query: 461 LGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQ 357
L +LLP +T+PL+ QHD EP+K+IE S LL N+
Sbjct: 169 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 273
>gb|T22860.1|T22860 4868 Lambda-PRL2 Arabidopsis thaliana cDNA clone 107M11T7, mRNA
sequence
Length = 449
Score = 193 bits (417), Expect = 4e-048
Identities = 83/104 (79%), Positives = 92/104 (88%)
Frame = +3 / +2
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRALVDAPDM R +NFKRLSLTDI
Sbjct: 29 AKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIXMNFKRLSLTDI 208
Query: 255 KIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASL 386
IDI RVPKK LI+AM ADVK KWE SSWG+KLIVQKRRA+L
Sbjct: 209 VIDINRVPKKKALIEAMXXADVKNKWEKSSWGRKLIVQKRRANL 340
Score = 134 bits (288), Expect = 3e-030
Identities = 63/102 (61%), Positives = 69/102 (67%)
Frame = -3 / -3
Query: 379 ALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRLMSILMSVSESRLKFTWHLTISG 200
AL F TISFLPHELFSHL TSA IA I+ F GTRLMS+ +SV ++ LKF W L+ISG
Sbjct: 333 ALRFCTISFLPHELFSHLFXTSAFXIASIKAFFFGTRLMSMTISVRDNLLKFXWILSISG 154
Query: 199 ASTSALFWXXXXXXXXXRP*SFP*FTRATRPISTNLLNGILA 74
AST ALFW P*S P*FT AT PIST LL I A
Sbjct: 153 ASTKALFWSTTSTITTSFP*SSP*FTSATLPISTYLLKPIFA 28
Score = 104 bits (222), Expect = 3e-021
Identities = 48/94 (51%), Positives = 61/94 (64%)
Frame = +2 / +1
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
E+ QEVR DR ELR W +RR+RR PEQ GCP*YG+ P ELQ ++Y +
Sbjct: 31 ENGFQEVR*DRESSTCELRRRSWKARRYRRRC*PEQSFGGCP*YGEDPXELQEVVSYRYC 210
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEA 358
*HQ C +E+ D+G+G *C +QVGE+LMG EA
Sbjct: 211 H*HQPCAKEEGFDRGNGKX*CXEQVGEKLMG*EA 312
>gb|BP575470.1|BP575470 BP575470 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-12-J16 3',
mRNA sequence
Length = 431
Score = 193 bits (417), Expect = 4e-048
Identities = 83/109 (76%), Positives = 94/109 (86%)
Frame = +3 / -1
Query: 171 VDQNRALVDAPDMVRCQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWG 350
VDQNRALVDAPDM R Q+N KRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG
Sbjct: 425 VDQNRALVDAPDMERIQMNLKRLSLTDIVIDINRVPKKKVLIEAMEKADVKNKWEKSSWG 246
Query: 351 KKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKASTA*GVSF 497
+KLIVQKRRA+LNDFDRFK+MLAKIKR G +RQELAKLK+ A* +++
Sbjct: 245 RKLIVQKRRAALNDFDRFKIMLAKIKRAGIVRQELAKLKREIAA*FLNY 99
Score = 149 bits (321), Expect = 7e-035
Identities = 69/102 (67%), Positives = 78/102 (76%)
Frame = -3 / +1
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A + SLASSCL P LLI A+M LNLSKSL ALLF TISFLPHELFSHL FTSA SI
Sbjct: 115 AAISLFSLASSCLTIPALLILANMILNLSKSLRAALLFCTISFLPHELFSHLFFTSAFSI 294
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFW 176
A I+ FLGT L+S+ MSV ++ KF W L++SGASTSALFW
Sbjct: 295 ASIKTFFLGTLLISMTMSVRDNLFKFIWILSMSGASTSALFW 420
Score = 117 bits (251), Expect = 3e-025
Identities = 54/107 (50%), Positives = 71/107 (66%)
Frame = +2 / -3
Query: 170 GRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMG 349
GRP+QGTCGCP*+G+ P E + ++Y*H+ *+Q QE+ D G+G *CE+QVGE+ MG
Sbjct: 426 GRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQQSSQEEGFD*GNGEG*CEEQVGEEFMG 247
Query: 350 QEADCPEEESIAQ*L**VQSHAGED*EGWCYQARARQA*EGVHSLRS 490
E C EE+S Q* * VQ H G++ EGW +A A A +G L S
Sbjct: 246 *ETYCAEEKSCPQ*F*QVQDHVGQNQEGWYCEAGAC*AKKGDRCLIS 106
Score = 81.3 bits (171), Expect(2) = 4e-023
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = -2 / +3
Query: 320 HISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVD 171
HIS LH L+Q LLG++ D+N DVSK +PL++HL H+RGIHKCPVLVD
Sbjct: 276 HISLLHCLNQNLLLGNSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVD 425
Score = 49.2 bits (101), Expect(2) = 4e-023
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -2 / +3
Query: 461 LGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQ 357
L +LLP +T+PL+ QHD EP+K+IE S LL N+
Sbjct: 135 LSKLLPHNTSPLDFGQHDLEPVKIIEGSSSLLHNK 239
>gb|BP635805.1|BP635805 BP635805 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-02-F17 3',
mRNA sequence
Length = 466
Score = 193 bits (417), Expect = 4e-048
Identities = 83/103 (80%), Positives = 91/103 (88%)
Frame = +3 / -1
Query: 177 QNRALVDAPDMVRCQVNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKK 356
QNRALVDAPDM R Q+NFKRLSLTDI IDI RVPKK LI+AME+ADVK KWE SSWG+K
Sbjct: 463 QNRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRK 284
Query: 357 LIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKASTA* 485
LIVQKRRA+LNDFDRFK+MLAKIK+ G +RQELAKLKK TA*
Sbjct: 283 LIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKLKKEITA* 155
Score = 152 bits (326), Expect = 1e-035
Identities = 70/102 (68%), Positives = 78/102 (76%)
Frame = -3 / +3
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
AV +FLS ASSCL P LI A+M LNLSKSL AL F TISFLPHELFSHL FTSA SI
Sbjct: 159 AVISFLSFASSCLTTPAFLILANMILNLSKSLRLALRFCTISFLPHELFSHLFFTSAFSI 338
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFW 176
A I+ F GTRLMS+ +SV ++ LKF W L+ISGAST ALFW
Sbjct: 339 ASIKAFFFGTRLMSMTISVRDNLLKFIWILSISGASTKALFW 464
Score = 80.8 bits (170), Expect(2) = 7e-022
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +2 / -3
Query: 176 PEQGTCGCP*YGQVPGELQAALTY*HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQE 355
PEQ GCP*YG+ P ELQ ++Y + *HQ C +E+ D+G+G *CE+QVGE+LMG E
Sbjct: 464 PEQSFGGCP*YGEDPDELQEVVSYRYCH*HQPCAKEEGFDRGNGKG*CEEQVGEKLMG*E 285
Query: 356 A 358
A
Sbjct: 284 A 282
Score = 45.5 bits (93), Expect(2) = 7e-022
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2 / -3
Query: 392 L**VQSHAGED*EGWCYQARARQA*EGVHSLRSLFP*MSC*SF 520
L**VQ H G+D E WC QARA + EG H L + C SF
Sbjct: 248 L**VQDHVGQDQESWCCQARACKTQEGDHCLIKYYLQFCCLSF 120
>gb|BP856130.1|BP856130 BP856130 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-28-P08 5',
mRNA sequence
Length = 400
Score = 124 bits (266), Expect(2) = 1e-047
Identities = 56/83 (67%), Positives = 64/83 (77%)
Frame = +3 / +2
Query: 36 HSLQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVR 215
H L + A+M FKR+VEIGRVALVNYG+D+G+LVVIVDVVDQNRA VDAPDM R
Sbjct: 17 HLHSELRPSNLPAAKMGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRAWVDAPDMER 196
Query: 216 CQVNFKRLSLTDIKIDIKRVPKK 284
Q+NFKRLSLTDI IDI K+
Sbjct: 197 IQMNFKRLSLTDIVIDINPCAKE 265
Score = 89.0 bits (188), Expect(2) = 6e-033
Identities = 36/68 (52%), Positives = 50/68 (73%)
Frame = -2 / -1
Query: 278 GDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVVHQGHAPDLH 99
G DVN ++ K +PLEVHL P HIRGIH VLV+++DD+DE +++ VVH+ ++PDL+
Sbjct: 259 GTRVDVNDNIGKRQPLEVHLDPLHIRGIHPSSVLVNNVDDNDELSMIFSVVHKCYSPDLN 80
Query: 98 EPLERHPR 75
PLE H R
Sbjct: 79 VPLETHFR 56
Score = 87.7 bits (185), Expect(2) = 1e-047
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = +3 / +3
Query: 270 RVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFK 407
RVPKK LI+AME+ADVK KWE S WG+KLIVQKRRA+LNDFDR +
Sbjct: 252 RVPKKKALIEAMEKADVKNKWEKS*WGRKLIVQKRRANLNDFDRLR 389
Score = 74.4 bits (156), Expect(2) = 6e-033
Identities = 34/47 (72%), Positives = 37/47 (78%)
Frame = -3 / -1
Query: 406 LNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVVFLGTRL 266
LNLSKSL AL F TISFLPH+LFSHL FTSA SIA I+ F GTR+
Sbjct: 388 LNLSKSLRLALRFCTISFLPHQLFSHLFFTSAFSIASIKAFFFGTRV 248
>gb|BP849678.1|BP849678 BP849678 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-10-C13 5',
mRNA sequence
Length = 359
Score = 134 bits (287), Expect(3) = 3e-047
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = +3 / +2
Query: 75 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDI 254
A+M F+RFVEIGRVALVNYG+DYG+LVVIVDVVDQNRALVDAPDM R Q+N KRLSLTDI
Sbjct: 14 AKMGFERFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDI 193
Query: 255 KIDIKRVPKK 284
IDI RVP++
Sbjct: 194 VIDINRVPRR 223
Score = 99.1 bits (210), Expect(3) = 3e-032
Identities = 37/65 (56%), Positives = 53/65 (81%)
Frame = -2 / -2
Query: 275 DTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVVHQGHAPDLHE 96
++ D+N DVSK +PL++HL H+RGIHKCPVLVD+IDD+ E +I+L VV++ H+P+LHE
Sbjct: 214 NSVDINDDVSKRQPLQIHLDSLHVRGIHKCPVLVDYIDDNHELSIILAVVNERHSPNLHE 35
Query: 95 PLERH 81
L+ H
Sbjct: 34 SLKTH 20
Score = 84.9 bits (179), Expect(3) = 1e-022
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = +2 / +1
Query: 92 EVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD*HQ 268
E+RGD G LR GLW +R +RRC RP+QGTCGCP*+G+ P E + ++Y*H+ *+Q
Sbjct: 31 EIRGDWESGAR*LRRGLWKARGYRRCSRPKQGTCGCP*HGENPDEFEEVVSY*HRH*YQ 207
Score = 48.3 bits (99), Expect(3) = 3e-047
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +3 / +1
Query: 279 KKTTLIKAMEEADVKTKWENSSWGKK 356
KK LI+A E+ADVK KWE SSWG+K
Sbjct: 217 KKKVLIEAREKADVKNKWEKSSWGRK 294
Score = 47.3 bits (97), Expect(3) = 3e-047
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3 / +2
Query: 357 LIVQKRRASLNDFDRFKVMLA 419
LIVQKRRA+LNDFDRFK+MLA
Sbjct: 296 LIVQKRRAALNDFDRFKIMLA 358
Score = 46.4 bits (95), Expect(3) = 3e-032
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = -3 / -1
Query: 355 FLPHELFSHLVFTSASSIALIRVVFL 278
FLPHELFSHL FTSA S+A I+ FL
Sbjct: 293 FLPHELFSHLFFTSAFSLASIKTFFL 216
Score = 35.0 bits (70), Expect(3) = 1e-022
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2 / +3
Query: 278 QEDNPDQGDGGS*CEDQVGEQLMGQE 355
QE+ D G G *CE+QVGE+ MG E
Sbjct: 216 QEEGFD*GKGEG*CEEQVGEEFMG*E 293
Score = 33.6 bits (67), Expect(3) = 3e-032
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -3 / -3
Query: 418 ASMTLNLSKSLSDALLFWTISF 353
A+M LNLSKSL ALLF TI F
Sbjct: 357 ANMILNLSKSLRAALLFCTIRF 292
Score = 26.3 bits (51), Expect(3) = 1e-022
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 347 GQEADCPEEESIAQ*L**VQSHAG 418
G++ C EE+S Q* * VQ H G
Sbjct: 286 GRKPYCAEEKSCPQ*F*QVQDHVG 357
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,434,606,229
Number of Sequences: 1013581
Number of extensions: 18039372
Number of successful extensions: 121850
Number of sequences better than 1.0e-020: 124
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 51459928586
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)