TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716352.2.1
(990 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_117459.2| Arabidopsis thaliana ATGRP2 (GLYCINE-RICH ... 154 1e-038
gb|AY085621.1| Arabidopsis thaliana clone 16314 mRNA, compl... 154 1e-038
ref|NM_179046.1| Arabidopsis thaliana ATGRP2 (GLYCINE-RICH ... 154 1e-038
gb|AY072361.1| Arabidopsis thaliana glycine-rich RNA-bindin... 154 1e-038
emb|AJ002892.1|ATAJ2892 Arabidopsis thaliana mRNA for glyci... 154 1e-038
gb|N38173.1|N38173 19400 Lambda-PRL2 Arabidopsis thaliana c... 153 1e-038
gb|BT002197.1| Arabidopsis thaliana glycine-rich RNA-bindin... 154 2e-037
emb|AX507064.1| Sequence 1759 from Patent WO0216655 154 2e-037
emb|X69377.1|ATGBP A.thaliana mRNA for glycine-rich RNA-bin... 154 8e-037
gb|AV534963.1|AV534963 AV534963 Arabidopsis thaliana flower... 154 5e-036
gb|CK120529.1|CK120529 207d08.p1 AtM1 Arabidopsis thaliana ... 154 5e-036
gb|BP846031.1|BP846031 BP846031 RAFL21 Arabidopsis thaliana... 143 3e-035
gb|BP855564.1|BP855564 BP855564 RAFL21 Arabidopsis thaliana... 143 3e-035
gb|BP836326.1|BP836326 BP836326 RAFL19 Arabidopsis thaliana... 143 3e-035
gb|CF651801.1|CF651801 15-L020580-066-004-N04-SP6P MPIZ-ADI... 151 4e-035
gb|AY070755.1| Arabidopsis thaliana AT3g23830/F14O13_2 mRNA... 151 4e-035
gb|AY097374.1| Arabidopsis thaliana AT3g23830/F14O13_2 mRNA... 151 4e-035
gb|AY085838.1| Arabidopsis thaliana clone 18903 mRNA, compl... 151 4e-035
emb|BX842223.1|CNS09YDW Arabidopsis thaliana Full-length cD... 151 4e-035
emb|BX825968.1|CNS0A683 Arabidopsis thaliana Full-length cD... 151 4e-035
emb|CQ804676.1| Sequence 1087 from Patent WO2004035798 151 4e-035
ref|NM_113288.2| Arabidopsis thaliana RNA binding / nucleic... 151 4e-035
ref|NM_180298.2| Arabidopsis thaliana RNA binding / nucleic... 151 4e-035
gb|BP844257.1|BP844257 BP844257 RAFL21 Arabidopsis thaliana... 142 5e-035
gb|BP843804.1|BP843804 BP843804 RAFL21 Arabidopsis thaliana... 142 7e-035
gb|AV824104.1|AV824104 AV824104 RAFL6 Arabidopsis thaliana ... 148 2e-034
gb|BP843983.1|BP843983 BP843983 RAFL21 Arabidopsis thaliana... 136 2e-033
gb|BP834761.1|BP834761 BP834761 RAFL19 Arabidopsis thaliana... 133 2e-032
gb|BP866817.1|BP866817 BP866817 RAFL21 Arabidopsis thaliana... 133 2e-032
gb|AW004286.1|AW004286 701546194 A. thaliana, Columbia Col-... 141 3e-032
gb|BP828882.1|BP828882 BP828882 RAFL19 Arabidopsis thaliana... 133 1e-031
gb|BP844426.1|BP844426 BP844426 RAFL21 Arabidopsis thaliana... 103 6e-031
gb|BP855883.1|BP855883 BP855883 RAFL21 Arabidopsis thaliana... 100 3e-030
gb|BP867229.1|BP867229 BP867229 RAFL21 Arabidopsis thaliana... 125 4e-030
gb|AV556198.1|AV556198 AV556198 Arabidopsis thaliana green ... 127 7e-028
gb|BP797991.1|BP797991 BP797991 RAFL14 Arabidopsis thaliana... 125 2e-027
gb|BP562290.2|BP562290 BP562290 RAFL9 Arabidopsis thaliana ... 125 3e-027
gb|BP843245.1|BP843245 BP843245 RAFL21 Arabidopsis thaliana... 125 3e-027
gb|AY060565.1| Arabidopsis thaliana AT5g61030/maf19_30 mRNA... 125 3e-027
gb|AY125548.1| Arabidopsis thaliana AT5g61030/maf19_30 mRNA... 125 3e-027
ref|NM_125496.2| Arabidopsis thaliana RNA binding / nucleic... 125 3e-027
gb|BP822242.1|BP822242 BP822242 RAFL19 Arabidopsis thaliana... 81 5e-027
gb|BP821683.1|BP821683 BP821683 RAFL19 Arabidopsis thaliana... 124 5e-027
gb|BP864844.1|BP864844 BP864844 RAFL21 Arabidopsis thaliana... 102 1e-026
gb|BP849579.1|BP849579 BP849579 RAFL21 Arabidopsis thaliana... 84 1e-026
emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosom... 66 3e-026
emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome ... 66 3e-026
gb|BP812570.1|BP812570 BP812570 RAFL19 Arabidopsis thaliana... 66 5e-026
gb|BP821529.1|BP821529 BP821529 RAFL19 Arabidopsis thaliana... 121 5e-026
gb|AV518608.1|AV518608 AV518608 Arabidopsis thaliana aboveg... 120 6e-026
gb|AV554309.1|AV554309 AV554309 Arabidopsis thaliana roots ... 119 1e-025
gb|BP561050.1|BP561050 BP561050 RAFL5 Arabidopsis thaliana ... 119 1e-025
gb|BP609752.1|BP609752 BP609752 RAFL16 Arabidopsis thaliana... 119 1e-025
gb|AY045963.1| Arabidopsis thaliana putative 40S ribosomal ... 119 1e-025
gb|AY091354.1| Arabidopsis thaliana putative 40S ribosomal ... 119 1e-025
emb|AX506283.1| Sequence 978 from Patent WO0216655 119 1e-025
emb|X77989.1|ATRPS19 A.thaliana (C24) nuclear encoded mitoc... 119 1e-025
ref|NM_124103.2| Arabidopsis thaliana RPS19; RNA binding AT... 119 1e-025
gb|AV439846.1|AV439846 AV439846 Arabidopsis thaliana above-... 118 2e-025
gb|BP799236.1|BP799236 BP799236 RAFL14 Arabidopsis thaliana... 98 3e-025
gb|AI100105.1|AI100105 34480 Lambda-PRL2 Arabidopsis thalia... 118 3e-025
gb|AV783120.1|AV783120 AV783120 RAFL5 Arabidopsis thaliana ... 118 3e-025
gb|AV785128.1|AV785128 AV785128 RAFL6 Arabidopsis thaliana ... 118 3e-025
gb|AV785242.1|AV785242 AV785242 RAFL6 Arabidopsis thaliana ... 118 3e-025
gb|AV795585.1|AV795585 AV795585 RAFL8 Arabidopsis thaliana ... 118 3e-025
gb|AV795831.1|AV795831 AV795831 RAFL8 Arabidopsis thaliana ... 118 3e-025
gb|AV810449.1|AV810449 AV810449 RAFL9 Arabidopsis thaliana ... 118 3e-025
gb|AV819402.1|AV819402 AV819402 RAFL11 Arabidopsis thaliana... 118 3e-025
gb|AV441000.1|AV441000 AV441000 Arabidopsis thaliana above-... 118 3e-025
gb|AV518968.1|AV518968 AV518968 Arabidopsis thaliana aboveg... 118 3e-025
gb|AV519828.1|AV519828 AV519828 Arabidopsis thaliana aboveg... 118 3e-025
gb|AV531948.1|AV531948 AV531948 Arabidopsis thaliana flower... 118 3e-025
gb|AV532419.1|AV532419 AV532419 Arabidopsis thaliana flower... 118 3e-025
gb|AV532577.1|AV532577 AV532577 Arabidopsis thaliana flower... 118 3e-025
gb|AV532822.1|AV532822 AV532822 Arabidopsis thaliana flower... 118 3e-025
gb|AV534482.1|AV534482 AV534482 Arabidopsis thaliana flower... 118 3e-025
gb|AV535461.1|AV535461 AV535461 Arabidopsis thaliana flower... 118 3e-025
gb|AV535554.1|AV535554 AV535554 Arabidopsis thaliana flower... 118 3e-025
gb|AV546081.1|AV546081 AV546081 Arabidopsis thaliana roots ... 118 3e-025
gb|AV555007.1|AV555007 AV555007 Arabidopsis thaliana green ... 118 3e-025
gb|AV559316.1|AV559316 AV559316 Arabidopsis thaliana green ... 118 3e-025
gb|AV559690.1|AV559690 AV559690 Arabidopsis thaliana green ... 118 3e-025
gb|AV563389.1|AV563389 AV563389 Arabidopsis thaliana green ... 118 3e-025
gb|AV566305.1|AV566305 AV566305 Arabidopsis thaliana green ... 118 3e-025
gb|AV566658.1|AV566658 AV566658 Arabidopsis thaliana green ... 118 3e-025
gb|AV567702.1|AV567702 AV567702 Arabidopsis thaliana green ... 118 3e-025
gb|BP587632.1|BP587632 BP587632 RAFL15 Arabidopsis thaliana... 118 3e-025
gb|BP594272.1|BP594272 BP594272 RAFL15 Arabidopsis thaliana... 118 3e-025
gb|BP595433.1|BP595433 BP595433 RAFL15 Arabidopsis thaliana... 118 3e-025
gb|BP596052.1|BP596052 BP596052 RAFL15 Arabidopsis thaliana... 118 3e-025
gb|BP787595.1|BP787595 BP787595 RAFL7 Arabidopsis thaliana ... 118 3e-025
gb|BP788040.1|BP788040 BP788040 RAFL7 Arabidopsis thaliana ... 118 3e-025
gb|BP793931.1|BP793931 BP793931 RAFL7 Arabidopsis thaliana ... 118 3e-025
gb|M94554.1|ATHRNABPA Arabidopsis thaliana 31-kDa RNA bindi... 118 3e-025
emb|X63157.1|AT5DBINDN A.thaliana mRNA (5'region) for DNA b... 118 3e-025
gb|AF410318.1|AF410318 Arabidopsis thaliana AT4g24770/F22K1... 118 3e-025
gb|AY143865.1| Arabidopsis thaliana At4g24770/F22K18_30 mRN... 118 3e-025
dbj|D31713.1|ATHCP31D Arabidopsis thaliana mRNA for chlorop... 118 3e-025
emb|X61108.1|ATRNPDG A.thaliana rnpD gene for RNA binding p... 118 3e-025
emb|X65255.1|ATRNPT A.thaliana mRNA for RNA-binding protein... 118 3e-025
ref|NM_118610.2| Arabidopsis thaliana RBP31 (31-KDA RNA BIN... 118 3e-025
gb|AV788790.1|AV788790 AV788790 RAFL6 Arabidopsis thaliana ... 116 8e-025
gb|AV820902.1|AV820902 AV820902 RAFL11 Arabidopsis thaliana... 116 8e-025
gb|BP789442.1|BP789442 BP789442 RAFL7 Arabidopsis thaliana ... 116 8e-025
gb|T13871.1|T13871 2036 Lambda-PRL2 Arabidopsis thaliana cD... 107 9e-025
gb|BP590242.1|BP590242 BP590242 RAFL15 Arabidopsis thaliana... 116 2e-024
gb|AV810090.1|AV810090 AV810090 RAFL9 Arabidopsis thaliana ... 115 2e-024
gb|BP786287.1|BP786287 BP786287 RAFL7 Arabidopsis thaliana ... 115 2e-024
gb|BP839201.1|BP839201 BP839201 RAFL19 Arabidopsis thaliana... 111 2e-024
gb|AV787327.1|AV787327 AV787327 RAFL6 Arabidopsis thaliana ... 115 3e-024
gb|BP824405.1|BP824405 BP824405 RAFL19 Arabidopsis thaliana... 115 3e-024
gb|AV796075.1|AV796075 AV796075 RAFL9 Arabidopsis thaliana ... 114 4e-024
gb|BP561087.1|BP561087 BP561087 RAFL6 Arabidopsis thaliana ... 114 4e-024
gb|BP818339.1|BP818339 BP818339 RAFL19 Arabidopsis thaliana... 114 4e-024
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 94 5e-024
gb|AV821887.1|AV821887 AV821887 RAFL4 Arabidopsis thaliana ... 114 5e-024
gb|BP560510.2|BP560510 BP560510 RAFL3 Arabidopsis thaliana ... 114 5e-024
gb|BP817577.1|BP817577 BP817577 RAFL19 Arabidopsis thaliana... 114 5e-024
gb|BP857973.1|BP857973 BP857973 RAFL21 Arabidopsis thaliana... 114 5e-024
emb|BX842113.1|CNS09YEN Arabidopsis thaliana Full-length cD... 107 6e-024
gb|BP820418.1|BP820418 BP820418 RAFL19 Arabidopsis thaliana... 70 6e-024
gb|BP817687.1|BP817687 BP817687 RAFL19 Arabidopsis thaliana... 113 1e-023
gb|BP837202.1|BP837202 BP837202 RAFL19 Arabidopsis thaliana... 113 1e-023
gb|AV824440.1|AV824440 AV824440 RAFL6 Arabidopsis thaliana ... 112 1e-023
gb|AV827790.1|AV827790 AV827790 RAFL9 Arabidopsis thaliana ... 112 1e-023
gb|BP560926.1|BP560926 BP560926 RAFL5 Arabidopsis thaliana ... 112 1e-023
gb|BP811879.1|BP811879 BP811879 RAFL19 Arabidopsis thaliana... 112 1e-023
gb|BP813869.1|BP813869 BP813869 RAFL19 Arabidopsis thaliana... 112 1e-023
gb|BP818953.1|BP818953 BP818953 RAFL19 Arabidopsis thaliana... 112 1e-023
gb|BP823305.1|BP823305 BP823305 RAFL19 Arabidopsis thaliana... 112 1e-023
gb|BP828510.1|BP828510 BP828510 RAFL19 Arabidopsis thaliana... 112 1e-023
gb|BP829126.1|BP829126 BP829126 RAFL19 Arabidopsis thaliana... 112 1e-023
gb|BP834466.1|BP834466 BP834466 RAFL19 Arabidopsis thaliana... 112 1e-023
gb|BP839641.1|BP839641 BP839641 RAFL19 Arabidopsis thaliana... 112 1e-023
gb|BP841652.1|BP841652 BP841652 RAFL21 Arabidopsis thaliana... 112 1e-023
gb|BP847598.1|BP847598 BP847598 RAFL21 Arabidopsis thaliana... 112 1e-023
gb|BP857981.1|BP857981 BP857981 RAFL21 Arabidopsis thaliana... 112 1e-023
gb|BP863166.1|BP863166 BP863166 RAFL21 Arabidopsis thaliana... 112 1e-023
gb|BP864431.1|BP864431 BP864431 RAFL21 Arabidopsis thaliana... 112 1e-023
gb|BP868718.1|BP868718 BP868718 RAFL21 Arabidopsis thaliana... 112 1e-023
gb|BP868849.1|BP868849 BP868849 RAFL21 Arabidopsis thaliana... 112 1e-023
gb|AY054284.1| Arabidopsis thaliana At2g21660/F2G1.7 mRNA, ... 112 1e-023
gb|AF428381.1|AF428381 Arabidopsis thaliana At2g22292/F2G1.... 112 1e-023
gb|AY085214.1| Arabidopsis thaliana clone 13879 mRNA, compl... 112 1e-023
gb|BT008667.1| Arabidopsis thaliana clone RAFL17-07-B10 (R5... 112 1e-023
ref|NM_127738.2| Arabidopsis thaliana ATGRP7; RNA binding A... 112 1e-023
ref|NM_179686.1| Arabidopsis thaliana ATGRP7; RNA binding A... 112 1e-023
gb|AV829891.1|AV829891 AV829891 RAFL9 Arabidopsis thaliana ... 112 2e-023
gb|BP819915.1|BP819915 BP819915 RAFL19 Arabidopsis thaliana... 102 2e-023
gb|BP814608.1|BP814608 BP814608 RAFL19 Arabidopsis thaliana... 111 3e-023
gb|BE037790.1|BE037790 AA04B11 AA Arabidopsis thaliana cDNA... 111 4e-023
gb|AV783196.1|AV783196 AV783196 RAFL5 Arabidopsis thaliana ... 111 4e-023
gb|AV789573.1|AV789573 AV789573 RAFL6 Arabidopsis thaliana ... 111 4e-023
gb|AV815257.1|AV815257 AV815257 RAFL9 Arabidopsis thaliana ... 111 4e-023
gb|CB185679.2|CB185679 EST00605 Arabidopsis avirulent Pseud... 111 4e-023
gb|AV439497.1|AV439497 AV439497 Arabidopsis thaliana above-... 111 4e-023
gb|AY048251.1| Arabidopsis thaliana At2g37220/F3G5.1 mRNA, ... 111 4e-023
gb|AF370167.1| Arabidopsis thaliana putative RNA-binding pr... 111 4e-023
gb|AY059129.1| Arabidopsis thaliana putative RNA-binding pr... 111 4e-023
gb|AY088648.1| Arabidopsis thaliana clone 8849 mRNA, comple... 111 4e-023
emb|BX819768.1|CNS0A9D9 Arabidopsis thaliana Full-length cD... 111 4e-023
emb|CQ805140.1| Sequence 1551 from Patent WO2004035798 111 4e-023
ref|NM_129278.2| Arabidopsis thaliana RNA binding / nucleic... 111 4e-023
gb|AA394523.1|AA394523 26106 Lambda-PRL2 Arabidopsis thalia... 111 5e-023
gb|BE038087.1|BE038087 AA08F12 AA Arabidopsis thaliana cDNA... 111 5e-023
gb|BE038374.1|BE038374 AA12F07 AA Arabidopsis thaliana cDNA... 111 5e-023
gb|BE038941.1|BE038941 AB07E07 AB Arabidopsis thaliana cDNA... 111 5e-023
gb|BE039243.1|BE039243 AC01A07 AC Arabidopsis thaliana cDNA... 111 5e-023
gb|AV797428.1|AV797428 AV797428 RAFL9 Arabidopsis thaliana ... 111 5e-023
gb|CB258009.1|CB258009 79-E011802-014-004-M20-T7R MPIZ-ADIS... 111 5e-023
gb|AV526080.1|AV526080 AV526080 Arabidopsis thaliana aboveg... 111 5e-023
gb|AV549060.1|AV549060 AV549060 Arabidopsis thaliana roots ... 111 5e-023
gb|AV550949.1|AV550949 AV550949 Arabidopsis thaliana roots ... 111 5e-023
gb|AV551092.1|AV551092 AV551092 Arabidopsis thaliana roots ... 111 5e-023
gb|AV552957.1|AV552957 AV552957 Arabidopsis thaliana roots ... 111 5e-023
gb|AV553315.1|AV553315 AV553315 Arabidopsis thaliana roots ... 111 5e-023
gb|AV553433.1|AV553433 AV553433 Arabidopsis thaliana roots ... 111 5e-023
gb|AV554341.1|AV554341 AV554341 Arabidopsis thaliana roots ... 111 5e-023
gb|CK117959.1|CK117959 209c06.p1 AtM1 Arabidopsis thaliana ... 111 5e-023
gb|CK118082.1|CK118082 218d07.p1 AtM1 Arabidopsis thaliana ... 111 5e-023
gb|CK118291.1|CK118291 217l10.p1 AtM1 Arabidopsis thaliana ... 111 5e-023
gb|CK119626.1|CK119626 211e18.p1 AtM1 Arabidopsis thaliana ... 111 5e-023
gb|BP562990.1|BP562990 BP562990 RAFL17 Arabidopsis thaliana... 111 5e-023
gb|BP591801.1|BP591801 BP591801 RAFL15 Arabidopsis thaliana... 111 5e-023
gb|CB253428.1|CB253428 02-E010740-019-001-C13-T7R MPIZ-ADIS... 111 5e-023
gb|BP816707.1|BP816707 BP816707 RAFL19 Arabidopsis thaliana... 111 5e-023
gb|BP828581.1|BP828581 BP828581 RAFL19 Arabidopsis thaliana... 111 5e-023
gb|BP829050.1|BP829050 BP829050 RAFL19 Arabidopsis thaliana... 111 5e-023
gb|BP830955.1|BP830955 BP830955 RAFL19 Arabidopsis thaliana... 111 5e-023
gb|BP842179.1|BP842179 BP842179 RAFL21 Arabidopsis thaliana... 111 5e-023
gb|BP857958.1|BP857958 BP857958 RAFL21 Arabidopsis thaliana... 111 5e-023
gb|BP859297.1|BP859297 BP859297 RAFL21 Arabidopsis thaliana... 111 5e-023
gb|BP868315.1|BP868315 BP868315 RAFL21 Arabidopsis thaliana... 111 5e-023
gb|L00648.1|ATHRBPA Arabidopsis thaliana RNA-binding protei... 111 5e-023
emb|AX412520.1| Sequence 284 from Patent WO0222675 111 5e-023
emb|AX412741.1| Sequence 505 from Patent WO0222675 111 5e-023
emb|AX507112.1| Sequence 1807 from Patent WO0216655 111 5e-023
emb|BX825177.1|CNS0A6HW Arabidopsis thaliana Full-length cD... 111 5e-023
emb|BX821551.1|CNS0A92D Arabidopsis thaliana Full-length cD... 111 5e-023
emb|BX821373.1|CNS0A98T Arabidopsis thaliana Full-length cD... 111 5e-023
emb|BX819936.1|CNS0AAC9 Arabidopsis thaliana Full-length cD... 111 5e-023
gb|BT012118.1| Arabidopsis thaliana At3g08000 gene, complet... 111 5e-023
gb|BT012373.1| Arabidopsis thaliana At3g08000 mRNA, complet... 111 5e-023
emb|Z14987.1|ATGRP7 A.thaliana mRNA for glycine rich protein 111 5e-023
ref|NM_111679.3| Arabidopsis thaliana RNA binding / nucleic... 111 5e-023
gb|AV518647.1|AV518647 AV518647 Arabidopsis thaliana aboveg... 110 7e-023
gb|AV519864.1|AV519864 AV519864 Arabidopsis thaliana aboveg... 110 7e-023
gb|AV533282.1|AV533282 AV533282 Arabidopsis thaliana flower... 110 7e-023
gb|BP836311.1|BP836311 BP836311 RAFL19 Arabidopsis thaliana... 110 7e-023
gb|BP856182.1|BP856182 BP856182 RAFL21 Arabidopsis thaliana... 110 7e-023
gb|AV831525.1|AV831525 AV831525 RAFL9 Arabidopsis thaliana ... 110 9e-023
gb|CF651543.1|CF651543 65-E009213w-013-001-A17-T7R MPIZ-ADI... 110 9e-023
gb|BP822308.1|BP822308 BP822308 RAFL19 Arabidopsis thaliana... 110 9e-023
gb|BP834687.1|BP834687 BP834687 RAFL19 Arabidopsis thaliana... 110 9e-023
gb|BP862844.1|BP862844 BP862844 RAFL21 Arabidopsis thaliana... 110 9e-023
gb|BP800510.1|BP800510 BP800510 RAFL14 Arabidopsis thaliana... 67 1e-022
gb|CB258522.1|CB258522 02-E011798-014-004-C02-T7R MPIZ-ADIS... 109 1e-022
gb|CB258524.1|CB258524 02-E011802-014-004-C02-T7R MPIZ-ADIS... 109 1e-022
gb|CF652237.1|CF652237 42-L020580-066-004-D12-SP6P MPIZ-ADI... 109 1e-022
gb|CF652408.1|CF652408 53-L020578-066-004-I14-SP6P MPIZ-ADI... 109 1e-022
gb|AV526150.1|AV526150 AV526150 Arabidopsis thaliana aboveg... 109 1e-022
gb|AV541453.1|AV541453 AV541453 Arabidopsis thaliana roots ... 109 1e-022
gb|AV550032.1|AV550032 AV550032 Arabidopsis thaliana roots ... 109 1e-022
gb|AV553032.1|AV553032 AV553032 Arabidopsis thaliana roots ... 109 1e-022
gb|AV555070.1|AV555070 AV555070 Arabidopsis thaliana green ... 109 1e-022
gb|AV562357.1|AV562357 AV562357 Arabidopsis thaliana green ... 109 1e-022
gb|CK119765.1|CK119765 201d05.p1 AtM1 Arabidopsis thaliana ... 109 1e-022
gb|CK119838.1|CK119838 210l05.p1 AtM1 Arabidopsis thaliana ... 109 1e-022
gb|CK119932.1|CK119932 210b03.p1 AtM1 Arabidopsis thaliana ... 109 1e-022
gb|CK120354.1|CK120354 207i18.p1 AtM1 Arabidopsis thaliana ... 109 1e-022
gb|CK121708.1|CK121708 201p12.p1 AtM1 Arabidopsis thaliana ... 109 1e-022
gb|CB255490.1|CB255490 39-E015332-019-005-N09-T7R MPIZ-ADIS... 109 1e-022
gb|BP822586.1|BP822586 BP822586 RAFL19 Arabidopsis thaliana... 109 1e-022
gb|BP846320.1|BP846320 BP846320 RAFL21 Arabidopsis thaliana... 109 1e-022
gb|BP866918.1|BP866918 BP866918 RAFL21 Arabidopsis thaliana... 109 1e-022
gb|BP868040.1|BP868040 BP868040 RAFL21 Arabidopsis thaliana... 109 1e-022
gb|L00649.1|ATHRBPB Arabidopsis thaliana RNA-binding protei... 109 1e-022
emb|AX412730.1| Sequence 494 from Patent WO0222675 109 1e-022
emb|BX829240.1|CNS0A3IA Arabidopsis thaliana Full-length cD... 109 1e-022
emb|CQ803620.1| Sequence 31 from Patent WO2004035798 109 1e-022
emb|Z14988.1|ATGRP8 A.thaliana mRNA for glycine rich protein 109 1e-022
ref|NM_120087.2| Arabidopsis thaliana ATGRP8 (GLYCINE-RICH ... 109 1e-022
ref|NM_179192.1| Arabidopsis thaliana ATGRP8 (GLYCINE-RICH ... 109 1e-022
ref|NM_179193.1| Arabidopsis thaliana ATGRP8 (GLYCINE-RICH ... 109 1e-022
gb|N37253.1|N37253 18463 Lambda-PRL2 Arabidopsis thaliana c... 109 2e-022
gb|BP834048.1|BP834048 BP834048 RAFL19 Arabidopsis thaliana... 109 2e-022
emb|BX821372.1|CNS0A98S Arabidopsis thaliana Full-length cD... 109 2e-022
gb|T22895.1|T22895 4903 Lambda-PRL2 Arabidopsis thaliana cD... 108 2e-022
gb|N38225.1|N38225 19452 Lambda-PRL2 Arabidopsis thaliana c... 108 2e-022
gb|T76568.1|T76568 11346 Lambda-PRL2 Arabidopsis thaliana c... 108 2e-022
gb|R30618.1|R30618 13223 Lambda-PRL2 Arabidopsis thaliana c... 108 2e-022
gb|AV440204.2|AV440204 AV440204 Arabidopsis thaliana above-... 108 2e-022
gb|BP851908.1|BP851908 BP851908 RAFL21 Arabidopsis thaliana... 108 2e-022
gb|T75957.1|T75957 10735 Lambda-PRL2 Arabidopsis thaliana c... 108 3e-022
gb|T88648.1|T88648 12344 Lambda-PRL2 Arabidopsis thaliana c... 108 3e-022
gb|BP847785.1|BP847785 BP847785 RAFL21 Arabidopsis thaliana... 108 3e-022
gb|AY039909.1| Arabidopsis thaliana AT3g53460/F4P12_160 mRN... 108 3e-022
gb|AY077674.1| Arabidopsis thaliana AT3g53460/F4P12_160 mRN... 108 3e-022
gb|AY087840.1| Arabidopsis thaliana clone 38888 mRNA, compl... 108 3e-022
emb|BX823223.1|CNS0A6II Arabidopsis thaliana Full-length cD... 108 3e-022
emb|BX823854.1|CNS0A6O5 Arabidopsis thaliana Full-length cD... 108 3e-022
dbj|D31711.1|ATHCP29B Arabidopsis thaliana mRNA for chlorop... 108 3e-022
emb|CQ803706.1| Sequence 117 from Patent WO2004035798 108 3e-022
ref|NM_115206.2| Arabidopsis thaliana CP29; RNA binding AT3... 108 3e-022
ref|NM_180361.1| Arabidopsis thaliana CP29; RNA binding AT3... 108 3e-022
gb|R64832.1|R64832 13336 Lambda-PRL2 Arabidopsis thaliana c... 107 5e-022
gb|BX836802.1|BX836802 BX836802 Arabidopsis thaliana Flower... 107 5e-022
gb|AV545149.1|AV545149 AV545149 Arabidopsis thaliana roots ... 107 5e-022
gb|BP804157.1|BP804157 BP804157 RAFL14 Arabidopsis thaliana... 107 5e-022
gb|BP855098.1|BP855098 BP855098 RAFL21 Arabidopsis thaliana... 107 5e-022
gb|BP856441.1|BP856441 BP856441 RAFL21 Arabidopsis thaliana... 107 5e-022
gb|Z18189.1|Z18189 ATTS0693 Grenoble-B Arabidopsis thaliana... 107 5e-022
gb|BP855677.1|BP855677 BP855677 RAFL21 Arabidopsis thaliana... 85 5e-022
gb|T21802.1|T21802 3810 Lambda-PRL2 Arabidopsis thaliana cD... 107 6e-022
gb|AV530932.1|AV530932 AV530932 Arabidopsis thaliana flower... 107 6e-022
gb|AV554093.1|AV554093 AV554093 Arabidopsis thaliana roots ... 107 6e-022
gb|BP561156.2|BP561156 BP561156 RAFL6 Arabidopsis thaliana ... 107 6e-022
gb|BP803763.1|BP803763 BP803763 RAFL14 Arabidopsis thaliana... 107 6e-022
gb|H36603.1|H36603 14271 Lambda-PRL2 Arabidopsis thaliana c... 106 9e-022
gb|R90325.1|R90325 16680 Lambda-PRL2 Arabidopsis thaliana c... 106 9e-022
gb|N37807.1|N37807 19034 Lambda-PRL2 Arabidopsis thaliana c... 106 9e-022
gb|N37991.1|N37991 19218 Lambda-PRL2 Arabidopsis thaliana c... 106 9e-022
gb|BP636448.1|BP636448 BP636448 RAFL18 Arabidopsis thaliana... 106 9e-022
gb|BP864711.1|BP864711 BP864711 RAFL21 Arabidopsis thaliana... 106 9e-022
gb|BP644475.1|BP644475 BP644475 RAFL19 Arabidopsis thaliana... 98 1e-021
gb|AA597642.1|AA597642 29550 Lambda-PRL2 Arabidopsis thalia... 106 1e-021
gb|T21818.1|T21818 3826 Lambda-PRL2 Arabidopsis thaliana cD... 106 1e-021
gb|N65350.1|N65350 20390 Lambda-PRL2 Arabidopsis thaliana c... 106 1e-021
gb|T20406.1|T20406 2414 Lambda-PRL2 Arabidopsis thaliana cD... 106 1e-021
gb|T41901.1|T41901 5164 Lambda-PRL2 Arabidopsis thaliana cD... 106 1e-021
gb|BP635258.1|BP635258 BP635258 RAFL17 Arabidopsis thaliana... 106 1e-021
gb|BP839819.1|BP839819 BP839819 RAFL19 Arabidopsis thaliana... 106 1e-021
gb|BP642712.1|BP642712 BP642712 RAFL19 Arabidopsis thaliana... 97 2e-021
gb|AV520056.1|AV520056 AV520056 Arabidopsis thaliana aboveg... 105 2e-021
gb|AV544383.1|AV544383 AV544383 Arabidopsis thaliana roots ... 105 2e-021
gb|BP560657.2|BP560657 BP560657 RAFL4 Arabidopsis thaliana ... 105 2e-021
gb|T21691.1|T21691 3699 Lambda-PRL2 Arabidopsis thaliana cD... 105 2e-021
gb|BP850246.1|BP850246 BP850246 RAFL21 Arabidopsis thaliana... 105 2e-021
gb|BP851176.1|BP851176 BP851176 RAFL21 Arabidopsis thaliana... 105 2e-021
gb|Z47648.1|Z47648 ATTS4504 Strasbourg-A Arabidopsis thalia... 105 3e-021
gb|AA650715.1|AA650715 30829 Lambda-PRL2 Arabidopsis thalia... 105 3e-021
gb|N65313.1|N65313 20353 Lambda-PRL2 Arabidopsis thaliana c... 105 3e-021
gb|AV783031.1|AV783031 AV783031 RAFL5 Arabidopsis thaliana ... 105 3e-021
gb|AV784811.1|AV784811 AV784811 RAFL6 Arabidopsis thaliana ... 105 3e-021
gb|CB259466.1|CB259466 47-E9601-013-003-M12-t7r MPIZ-ADIS-0... 105 3e-021
gb|CB263069.1|CB263069 35-E8976-008-017-F09-pBl2 MPIZ-ADIS-... 105 3e-021
gb|CK119219.1|CK119219 213k18.p1 AtM1 Arabidopsis thaliana ... 105 3e-021
gb|AY039868.1| Arabidopsis thaliana AT5g50250/K6A12_11 mRNA... 105 3e-021
gb|AY077660.1| Arabidopsis thaliana AT5g50250/K6A12_11 mRNA... 105 3e-021
ref|NM_124404.2| Arabidopsis thaliana RNA binding / nucleic... 105 3e-021
emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosom... 94 4e-021
emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome... 94 4e-021
emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4... 94 4e-021
dbj|D31712.1|ATHCP31C Arabidopsis thaliana gene for chlorop... 94 4e-021
gb|U08467.1|ATU08467 Arabidopsis thaliana chloroplast RNA-b... 94 4e-021
gb|N37297.1|N37297 18524 Lambda-PRL2 Arabidopsis thaliana c... 104 4e-021
gb|T44805.1|T44805 8068 Lambda-PRL2 Arabidopsis thaliana cD... 104 4e-021
gb|R64835.1|R64835 13339 Lambda-PRL2 Arabidopsis thaliana c... 104 4e-021
gb|T46394.1|T46394 9657 Lambda-PRL2 Arabidopsis thaliana cD... 104 4e-021
emb|BX826929.1|CNS0A47C Arabidopsis thaliana Full-length cD... 104 4e-021
gb|T45524.1|T45524 8787 Lambda-PRL2 Arabidopsis thaliana cD... 104 6e-021
gb|AV518348.1|AV518348 AV518348 Arabidopsis thaliana aboveg... 104 6e-021
gb|T45005.1|T45005 8268 Lambda-PRL2 Arabidopsis thaliana cD... 103 8e-021
gb|T76777.1|T76777 11555 Lambda-PRL2 Arabidopsis thaliana c... 103 8e-021
gb|R30522.1|R30522 13127 Lambda-PRL2 Arabidopsis thaliana c... 103 8e-021
gb|BP653167.1|BP653167 BP653167 RAFL19 Arabidopsis thaliana... 103 8e-021
>ref|NM_117459.2| Arabidopsis thaliana ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2);
RNA binding / nucleic acid binding AT4G13850 (ATGRP2)
transcript variant AT4G13850.1 mRNA, complete cds
Length = 691
Score = 154 bits (330), Expect(2) = 1e-038
Identities = 61/95 (64%), Positives = 76/95 (80%)
Frame = -3 / +1
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 142 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 321
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
D AA AIS MDGKE++GR +RVN AN+RP+ R
Sbjct: 322 DEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 426
Score = 28.6 bits (56), Expect(2) = 1e-038
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +1
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 58 LFFRMAFCNKLGGLLRQNISSNG 126
>gb|AY085621.1| Arabidopsis thaliana clone 16314 mRNA, complete sequence
Length = 688
Score = 154 bits (330), Expect(2) = 1e-038
Identities = 61/95 (64%), Positives = 76/95 (80%)
Frame = -3 / +1
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 142 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 321
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
D AA AIS MDGKE++GR +RVN AN+RP+ R
Sbjct: 322 DEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 426
Score = 28.6 bits (56), Expect(2) = 1e-038
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +1
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 58 LFFRMAFCNKLGGLLRQNISSNG 126
>ref|NM_179046.1| Arabidopsis thaliana ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2);
RNA binding / nucleic acid binding AT4G13850 (ATGRP2)
transcript variant AT4G13850.2 mRNA, complete cds
Length = 687
Score = 154 bits (330), Expect(2) = 1e-038
Identities = 61/95 (64%), Positives = 76/95 (80%)
Frame = -3 / +1
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 142 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 321
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
D AA AIS MDGKE++GR +RVN AN+RP+ R
Sbjct: 322 DEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 426
Score = 28.6 bits (56), Expect(2) = 1e-038
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +1
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 58 LFFRMAFCNKLGGLLRQNISSNG 126
>gb|AY072361.1| Arabidopsis thaliana glycine-rich RNA-binding protein AtGRP2 - like
(At4g13850) mRNA, complete cds
Length = 686
Score = 154 bits (330), Expect(2) = 1e-038
Identities = 61/95 (64%), Positives = 76/95 (80%)
Frame = -3 / +1
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 139 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 318
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
D AA AIS MDGKE++GR +RVN AN+RP+ R
Sbjct: 319 DEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 423
Score = 28.6 bits (56), Expect(2) = 1e-038
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +1
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 55 LFFRMAFCNKLGGLLRQNISSNG 123
>emb|AJ002892.1|ATAJ2892 Arabidopsis thaliana mRNA for glycine-rich RNA-binding protein
(AtGRP2)
Length = 675
Score = 154 bits (330), Expect(2) = 1e-038
Identities = 61/95 (64%), Positives = 76/95 (80%)
Frame = -3 / +3
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 126 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 305
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
D AA AIS MDGKE++GR +RVN AN+RP+ R
Sbjct: 306 DEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 410
Score = 28.6 bits (56), Expect(2) = 1e-038
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 42 LFFRMAFCNKLGGLLRQNISSNG 110
>gb|N38173.1|N38173 19400 Lambda-PRL2 Arabidopsis thaliana cDNA clone 220F6T7, mRNA
sequence
Length = 540
Score = 153 bits (329), Expect(2) = 1e-038
Identities = 61/95 (64%), Positives = 75/95 (78%)
Frame = -3 / +3
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 108 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFXHFGDVVDAKVIVDRETGRSRGFGFVNFN 287
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
D AA AIS MDGKE++GR +RVN AN+RP+ R
Sbjct: 288 DEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 392
Score = 29.0 bits (57), Expect(2) = 1e-038
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 24 LFFRMAFCNKLGGLLRQNISXNG 92
>gb|BT002197.1| Arabidopsis thaliana glycine-rich RNA-binding protein AtGRP2 - like
(At4g13850) mRNA, complete cds
Length = 581
Score = 154 bits (330), Expect(2) = 2e-037
Identities = 61/95 (64%), Positives = 76/95 (80%)
Frame = -3 / +1
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 73 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 252
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
D AA AIS MDGKE++GR +RVN AN+RP+ R
Sbjct: 253 DEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 357
Score = 24.9 bits (48), Expect(2) = 2e-037
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3 / +1
Query: 751 MAAFNKLGGLLRHSALVSG 695
MA NKLGGLLR + +G
Sbjct: 1 MAFCNKLGGLLRQNISSNG 57
>emb|AX507064.1| Sequence 1759 from Patent WO0216655
Length = 477
Score = 154 bits (330), Expect(2) = 2e-037
Identities = 61/95 (64%), Positives = 76/95 (80%)
Frame = -3 / +1
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 73 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 252
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
D AA AIS MDGKE++GR +RVN AN+RP+ R
Sbjct: 253 DEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 357
Score = 24.9 bits (48), Expect(2) = 2e-037
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3 / +1
Query: 751 MAAFNKLGGLLRHSALVSG 695
MA NKLGGLLR + +G
Sbjct: 1 MAFCNKLGGLLRQNISSNG 57
>emb|X69377.1|ATGBP A.thaliana mRNA for glycine-rich RNA-binding protein
Length = 562
Score = 154 bits (330), Expect(2) = 8e-037
Identities = 61/95 (64%), Positives = 76/95 (80%)
Frame = -3 / +2
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 17 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 196
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
D AA AIS MDGKE++GR +RVN AN+RP+ R
Sbjct: 197 DEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 301
Score = 24.9 bits (48), Expect(2) = 8e-037
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1 / +1
Query: 129 YWFWFLREVQMQDAS 85
+W+WFL+EV ++ S
Sbjct: 403 WWWWFLKEVLVKKKS 447
>gb|AV534963.1|AV534963 AV534963 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB088g03F 3', mRNA sequence
Length = 551
Score = 154 bits (330), Expect = 5e-036
Identities = 61/95 (64%), Positives = 76/95 (80%)
Frame = -3 / -2
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 550 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 371
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
D AA AIS MDGKE++GR +RVN AN+RP+ R
Sbjct: 370 DEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 266
>gb|CK120529.1|CK120529 207d08.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011D08207
5-PRIME, mRNA sequence
Length = 363
Score = 154 bits (330), Expect = 5e-036
Identities = 61/95 (64%), Positives = 76/95 (80%)
Frame = -3 / +3
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 18 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 197
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
D AA AIS MDGKE++GR +RVN AN+RP+ R
Sbjct: 198 DEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 302
>gb|BP846031.1|BP846031 BP846031 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-95-J04 5',
mRNA sequence
Length = 402
Score = 143 bits (306), Expect(2) = 3e-035
Identities = 57/88 (64%), Positives = 70/88 (79%)
Frame = -3 / +3
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRG GFVN++
Sbjct: 138 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGLGFVNFN 317
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNMAN 410
D AA AIS MDGKE++GR +RVN AN
Sbjct: 318 DEGAATAAISEMDGKELNGRHIRVNPAN 401
Score = 28.6 bits (56), Expect(2) = 3e-035
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 54 LFFRMAFCNKLGGLLRQNISSNG 122
>gb|BP855564.1|BP855564 BP855564 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-27-A21 5',
mRNA sequence
Length = 404
Score = 143 bits (306), Expect(2) = 3e-035
Identities = 57/89 (64%), Positives = 70/89 (78%)
Frame = -3 / +3
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG V +A+VI DRETGRSRG GFVN++
Sbjct: 138 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGNVVDAKVIVDRETGRSRGLGFVNFN 317
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNMANE 407
D AA AIS MDGKE++GR +RVN AN+
Sbjct: 318 DEGAATAAISEMDGKELNGRHIRVNPAND 404
Score = 28.6 bits (56), Expect(2) = 3e-035
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +1
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 55 LFFRMAFCNKLGGLLRQNISSNG 123
>gb|BP836326.1|BP836326 BP836326 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-16-B16 5',
mRNA sequence
Length = 394
Score = 143 bits (306), Expect(2) = 3e-035
Identities = 56/86 (65%), Positives = 70/86 (81%)
Frame = -3 / +1
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 133 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 312
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVNM 416
D AA AIS MDGKE++GR +RVN+
Sbjct: 313 DEGAATAAISEMDGKELNGRHIRVNL 390
Score = 28.6 bits (56), Expect(2) = 3e-035
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +1
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 49 LFFRMAFCNKLGGLLRQNISSNG 117
>gb|CF651801.1|CF651801 15-L020580-066-004-N04-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001N044Q 5-PRIME, mRNA sequence
Length = 694
Score = 151 bits (324), Expect = 4e-035
Identities = 62/105 (59%), Positives = 79/105 (75%)
Frame = -3 / +3
Query: 703 VSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGR 524
VS + G ++ + R MS+KLF+GGL WG DD L++AF+SFGEVTEA VI DRETGR
Sbjct: 123 VSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGR 302
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
SRGFGFV++S D+A AI MDGKE++GRQ+RVN+A ER + R
Sbjct: 303 SRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 437
>gb|AY070755.1| Arabidopsis thaliana AT3g23830/F14O13_2 mRNA, complete cds
Length = 709
Score = 151 bits (324), Expect = 4e-035
Identities = 62/105 (59%), Positives = 79/105 (75%)
Frame = -3 / +3
Query: 703 VSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGR 524
VS + G ++ + R MS+KLF+GGL WG DD L++AF+SFGEVTEA VI DRETGR
Sbjct: 138 VSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGR 317
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
SRGFGFV++S D+A AI MDGKE++GRQ+RVN+A ER + R
Sbjct: 318 SRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 452
>gb|AY097374.1| Arabidopsis thaliana AT3g23830/F14O13_2 mRNA, complete cds
Length = 411
Score = 151 bits (324), Expect = 4e-035
Identities = 62/105 (59%), Positives = 79/105 (75%)
Frame = -3 / +1
Query: 703 VSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGR 524
VS + G ++ + R MS+KLF+GGL WG DD L++AF+SFGEVTEA VI DRETGR
Sbjct: 43 VSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGR 222
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
SRGFGFV++S D+A AI MDGKE++GRQ+RVN+A ER + R
Sbjct: 223 SRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 357
>gb|AY085838.1| Arabidopsis thaliana clone 18903 mRNA, complete sequence
Length = 711
Score = 151 bits (324), Expect = 4e-035
Identities = 62/105 (59%), Positives = 79/105 (75%)
Frame = -3 / +2
Query: 703 VSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGR 524
VS + G ++ + R MS+KLF+GGL WG DD L++AF+SFGEVTEA VI DRETGR
Sbjct: 140 VSHSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGR 319
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
SRGFGFV++S D+A AI MDGKE++GRQ+RVN+A ER + R
Sbjct: 320 SRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 454
>emb|BX842223.1|CNS09YDW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL74ZB12 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 602
Score = 151 bits (324), Expect = 4e-035
Identities = 62/105 (59%), Positives = 79/105 (75%)
Frame = -3 / +3
Query: 703 VSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGR 524
VS + G ++ + R MS+KLF+GGL WG DD L++AF+SFGEVTEA VI DRETGR
Sbjct: 102 VSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGR 281
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
SRGFGFV++S D+A AI MDGKE++GRQ+RVN+A ER + R
Sbjct: 282 SRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 416
>emb|BX825968.1|CNS0A683 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL76ZH01 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 658
Score = 151 bits (324), Expect = 4e-035
Identities = 62/105 (59%), Positives = 79/105 (75%)
Frame = -3 / +1
Query: 703 VSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGR 524
VS + G ++ + R MS+KLF+GGL WG DD L++AF+SFGEVTEA VI DRETGR
Sbjct: 106 VSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGR 285
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
SRGFGFV++S D+A AI MDGKE++GRQ+RVN+A ER + R
Sbjct: 286 SRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 420
>emb|CQ804676.1| Sequence 1087 from Patent WO2004035798
Length = 411
Score = 151 bits (324), Expect = 4e-035
Identities = 62/105 (59%), Positives = 79/105 (75%)
Frame = -3 / +1
Query: 703 VSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGR 524
VS + G ++ + R MS+KLF+GGL WG DD L++AF+SFGEVTEA VI DRETGR
Sbjct: 43 VSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGR 222
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
SRGFGFV++S D+A AI MDGKE++GRQ+RVN+A ER + R
Sbjct: 223 SRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 357
>ref|NM_113288.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT3G23830
transcript variant AT3G23830.1 mRNA, complete cds
Length = 792
Score = 151 bits (324), Expect = 4e-035
Identities = 62/105 (59%), Positives = 79/105 (75%)
Frame = -3 / +1
Query: 703 VSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGR 524
VS + G ++ + R MS+KLF+GGL WG DD L++AF+SFGEVTEA VI DRETGR
Sbjct: 139 VSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGR 318
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
SRGFGFV++S D+A AI MDGKE++GRQ+RVN+A ER + R
Sbjct: 319 SRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 453
>ref|NM_180298.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT3G23830
transcript variant AT3G23830.2 mRNA, complete cds
Length = 759
Score = 151 bits (324), Expect = 4e-035
Identities = 62/105 (59%), Positives = 79/105 (75%)
Frame = -3 / +1
Query: 703 VSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGR 524
VS + G ++ + R MS+KLF+GGL WG DD L++AF+SFGEVTEA VI DRETGR
Sbjct: 106 VSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGR 285
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
SRGFGFV++S D+A AI MDGKE++GRQ+RVN+A ER + R
Sbjct: 286 SRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 420
>gb|BP844257.1|BP844257 BP844257 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-89-K24 5',
mRNA sequence
Length = 393
Score = 142 bits (304), Expect(2) = 5e-035
Identities = 56/85 (65%), Positives = 69/85 (81%)
Frame = -3 / +1
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 139 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 318
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVN 419
D AA AIS MDGKE++GR +RVN
Sbjct: 319 DEGAATAAISEMDGKELNGRHIRVN 393
Score = 28.6 bits (56), Expect(2) = 5e-035
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +1
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 55 LFFRMAFCNKLGGLLRQNISSNG 123
>gb|BP843804.1|BP843804 BP843804 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-88-B09 5',
mRNA sequence
Length = 396
Score = 142 bits (304), Expect(2) = 7e-035
Identities = 56/85 (65%), Positives = 69/85 (81%)
Frame = -3 / +3
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 138 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 317
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVN 419
D AA AIS MDGKE++GR +RVN
Sbjct: 318 DEGAATAAISEMDGKELNGRHIRVN 392
Score = 28.1 bits (55), Expect(2) = 7e-035
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 54 LFFRMAFRNKLGGLLRQNISSNG 122
>gb|AV824104.1|AV824104 AV824104 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-13-I20 5',
mRNA sequence
Length = 645
Score = 148 bits (318), Expect = 2e-034
Identities = 61/105 (58%), Positives = 78/105 (74%)
Frame = -3 / +2
Query: 703 VSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGR 524
VS + G ++ + R MS+KLF+GGL WG DD L++A +SFGEVTEA VI DRETGR
Sbjct: 140 VSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQALTSFGEVTEATVIADRETGR 319
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
SRGFGFV++S D+A AI MDGKE++GRQ+RVN+A ER + R
Sbjct: 320 SRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 454
>gb|BP843983.1|BP843983 BP843983 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-88-K22 5',
mRNA sequence
Length = 386
Score = 136 bits (292), Expect(2) = 2e-033
Identities = 54/84 (64%), Positives = 67/84 (79%)
Frame = -3 / +3
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+A + FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 135 SMLGSLRLMSTKLFIGGLSWGTDDASLRDALAHFGDVVDAKVIVDRETGRSRGFGFVNFN 314
Query: 493 DSDAAKEAISAMDGKEIDGRQVRV 422
D AA AIS MDGKE++GR +RV
Sbjct: 315 DEGAATAAISEMDGKELNGRHIRV 386
Score = 28.6 bits (56), Expect(2) = 2e-033
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 51 LFFRMAFCNKLGGLLRQNISSNG 119
>gb|BP834761.1|BP834761 BP834761 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-11-E21 5',
mRNA sequence
Length = 380
Score = 133 bits (286), Expect(2) = 2e-032
Identities = 53/80 (66%), Positives = 65/80 (81%)
Frame = -3 / +2
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 137 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 316
Query: 493 DSDAAKEAISAMDGKEIDGR 434
D AA AIS MDGKE++GR
Sbjct: 317 DEGAATAAISEMDGKELNGR 376
Score = 28.6 bits (56), Expect(2) = 2e-032
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 54 LFFRMAFCNKLGGLLRQNISSNG 122
>gb|BP866817.1|BP866817 BP866817 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-79-A01 5',
mRNA sequence
Length = 379
Score = 133 bits (286), Expect(2) = 2e-032
Identities = 53/80 (66%), Positives = 65/80 (81%)
Frame = -3 / +3
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++
Sbjct: 138 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 317
Query: 493 DSDAAKEAISAMDGKEIDGR 434
D AA AIS MDGKE++GR
Sbjct: 318 DEGAATAAISEMDGKELNGR 377
Score = 28.6 bits (56), Expect(2) = 2e-032
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 54 LFFRMAFCNKLGGLLRQNISSNG 122
>gb|AW004286.1|AW004286 701546194 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701546194, mRNA sequence
Length = 492
Score = 141 bits (303), Expect = 3e-032
Identities = 59/105 (56%), Positives = 76/105 (72%)
Frame = -3 / -3
Query: 703 VSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGR 524
VS + G ++ + R MS+KLF+GGL WG DD L++AF+S+GEVTEA VI DRET R
Sbjct: 466 VSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSYGEVTEATVIADRETER 287
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 389
SRGFGFV+ S D+A AI MDGKE++GRQ+RVN+ ER + R
Sbjct: 286 SRGFGFVSSSCEDSANNAIKEMDGKELNGRQIRVNLPTERSSAPR 152
>gb|BP828882.1|BP828882 BP828882 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-80-E15 5',
mRNA sequence
Length = 387
Score = 133 bits (286), Expect(2) = 1e-031
Identities = 53/85 (62%), Positives = 66/85 (77%)
Frame = -3 / +1
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + R MSTKLFIGGL WG DD LR+A + FG+V +A+VI DRETGRSRG GFVN++
Sbjct: 133 SMLGSLRWMSTKLFIGGLSWGTDDASLRDALAHFGDVVDAKVIVDRETGRSRGLGFVNFN 312
Query: 493 DSDAAKEAISAMDGKEIDGRQVRVN 419
D AA AIS MDGKE++GR +RVN
Sbjct: 313 DEGAATAAISEMDGKELNGRHIRVN 387
Score = 25.8 bits (50), Expect(2) = 1e-031
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3 / +1
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGL R + +G
Sbjct: 49 LFFRMAFCNKLGGLWRQNISSNG 117
>gb|BP844426.1|BP844426 BP844426 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-90-F17 5',
mRNA sequence
Length = 395
Score = 103 bits (219), Expect(3) = 6e-031
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = -3 / +3
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVN 500
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRGFGFVN
Sbjct: 138 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVN 311
Score = 43.2 bits (88), Expect(3) = 6e-031
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -3 / +1
Query: 517 GFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVN 419
G ++D AA AIS MDGKE++GR +RVN
Sbjct: 295 GLDLSTFNDEGAATAAISEMDGKELNGRHIRVN 393
Score = 28.6 bits (56), Expect(3) = 6e-031
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 54 LFFRMAFCNKLGGLLRQNISSNG 122
>gb|BP855883.1|BP855883 BP855883 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-28-C14 5',
mRNA sequence
Length = 389
Score = 100 bits (214), Expect(3) = 3e-030
Identities = 40/59 (67%), Positives = 50/59 (84%)
Frame = -3 / +1
Query: 595 LREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVN 419
LR+AF+ FG+V +A+VI DRETGRSRGFGFVN++D AA AIS MDGKE++GR +RVN
Sbjct: 211 LRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATGAISEMDGKELNGRHIRVN 387
Score = 43.2 bits (88), Expect(3) = 3e-030
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / +2
Query: 658 ARLMSTKLFIGGLDWGVDD 602
+RLMSTKLFIGGL WG DD
Sbjct: 149 SRLMSTKLFIGGLSWGTDD 205
Score = 28.6 bits (56), Expect(3) = 3e-030
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 51 LFFRMAFCNKLGGLLRQNISSNG 119
>gb|BP867229.1|BP867229 BP867229 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-80-F13 5',
mRNA sequence
Length = 368
Score = 125 bits (268), Expect(2) = 4e-030
Identities = 50/77 (64%), Positives = 61/77 (79%)
Frame = -3 / +3
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + RLMSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRG GFVN++
Sbjct: 138 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGLGFVNFN 317
Query: 493 DSDAAKEAISAMDGKEI 443
D AA AIS MDGKE+
Sbjct: 318 DEGAATAAISEMDGKEL 368
Score = 28.6 bits (56), Expect(2) = 4e-030
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 54 LFFRMAFCNKLGGLLRQNISSNG 122
>gb|AV556198.1|AV556198 AV556198 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ036g11F 3', mRNA sequence
Length = 575
Score = 127 bits (271), Expect = 7e-028
Identities = 51/78 (65%), Positives = 62/78 (79%)
Frame = -3 / -3
Query: 622 LDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEI 443
L WG DD L++AF+SFGEVTEA VI DRETGRSRGFGFV++S D+A AI MDGKE+
Sbjct: 573 LSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKEL 394
Query: 442 DGRQVRVNMANERPAGNR 389
+GRQ+RVN+A ER + R
Sbjct: 393 NGRQIRVNLATERSSAPR 340
>gb|BP797991.1|BP797991 BP797991 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-05-J15 5',
mRNA sequence
Length = 389
Score = 125 bits (268), Expect = 2e-027
Identities = 50/71 (70%), Positives = 60/71 (84%)
Frame = -3 / +2
Query: 649 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 470
MS+KLF+GGL WG DD L++AF+SFGEVTEA VI DRETGRSRGFGFV++S D+AK A
Sbjct: 176 MSSKLFVGGLSWGTDDRSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSAKNA 355
Query: 469 ISAMDGKEIDG 437
I MDGKE++G
Sbjct: 356 IKEMDGKELNG 388
>gb|BP562290.2|BP562290 BP562290 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-71-B10 5',
mRNA sequence
Length = 473
Score = 125 bits (267), Expect = 3e-027
Identities = 49/86 (56%), Positives = 68/86 (79%)
Frame = -3 / +1
Query: 652 LMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKE 473
+ S+KLFIGG+ + +D+ LREAF+ +GEV + RVI DRETGRSRGFGFV ++ S+AA
Sbjct: 175 MSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASS 354
Query: 472 AISAMDGKEIDGRQVRVNMANERPAG 395
AI A+DG+++ GR V+VN AN+R +G
Sbjct: 355 AIQALDGRDLHGRVVKVNYANDRTSG 432
>gb|BP843245.1|BP843245 BP843245 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-57-H09 5',
mRNA sequence
Length = 382
Score = 125 bits (267), Expect = 3e-027
Identities = 49/80 (61%), Positives = 63/80 (78%)
Frame = -3 / +1
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYS 494
++ + R MSTKLFIGGL WG DD LR+AF+ FG+V +A+VI DRETGRSRG GFVN++
Sbjct: 139 SMLGSLRWMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGLGFVNFN 318
Query: 493 DSDAAKEAISAMDGKEIDGR 434
D AA AIS ++GKE++GR
Sbjct: 319 DEGAATAAISELEGKELNGR 378
>gb|AY060565.1| Arabidopsis thaliana AT5g61030/maf19_30 mRNA, complete cds
Length = 1146
Score = 125 bits (267), Expect = 3e-027
Identities = 49/86 (56%), Positives = 68/86 (79%)
Frame = -3 / +1
Query: 652 LMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKE 473
+ S+KLFIGG+ + +D+ LREAF+ +GEV + RVI DRETGRSRGFGFV ++ S+AA
Sbjct: 172 MSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASS 351
Query: 472 AISAMDGKEIDGRQVRVNMANERPAG 395
AI A+DG+++ GR V+VN AN+R +G
Sbjct: 352 AIQALDGRDLHGRVVKVNYANDRTSG 429
>gb|AY125548.1| Arabidopsis thaliana AT5g61030/maf19_30 mRNA, complete cds
Length = 930
Score = 125 bits (267), Expect = 3e-027
Identities = 49/86 (56%), Positives = 68/86 (79%)
Frame = -3 / +1
Query: 652 LMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKE 473
+ S+KLFIGG+ + +D+ LREAF+ +GEV + RVI DRETGRSRGFGFV ++ S+AA
Sbjct: 109 MSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASS 288
Query: 472 AISAMDGKEIDGRQVRVNMANERPAG 395
AI A+DG+++ GR V+VN AN+R +G
Sbjct: 289 AIQALDGRDLHGRVVKVNYANDRTSG 366
>ref|NM_125496.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G61030
mRNA, complete cds
Length = 1147
Score = 125 bits (267), Expect = 3e-027
Identities = 49/86 (56%), Positives = 68/86 (79%)
Frame = -3 / +1
Query: 652 LMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKE 473
+ S+KLFIGG+ + +D+ LREAF+ +GEV + RVI DRETGRSRGFGFV ++ S+AA
Sbjct: 172 MSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASS 351
Query: 472 AISAMDGKEIDGRQVRVNMANERPAG 395
AI A+DG+++ GR V+VN AN+R +G
Sbjct: 352 AIQALDGRDLHGRVVKVNYANDRTSG 429
>gb|BP822242.1|BP822242 BP822242 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-60-L05 5',
mRNA sequence
Length = 381
Score = 80.8 bits (170), Expect(3) = 5e-027
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -3 / +2
Query: 574 FGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGR 434
FG+V +A+VI DRETGRSRG GFVN++D AA AIS MDGKE++GR
Sbjct: 239 FGDVVDAKVIVDRETGRSRGLGFVNFNDEGAATAAISEMDGKELNGR 379
Score = 52.8 bits (109), Expect(3) = 5e-027
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -3 / +1
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSS 575
++ + RLMSTKLFIGGL WG DD LR+A +S
Sbjct: 139 SMLGSLRLMSTKLFIGGLSWGTDDASLRDALAS 237
Score = 28.1 bits (55), Expect(3) = 5e-027
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3 / +1
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + G
Sbjct: 55 LFFRMAFCNKLGGLLRQNISSKG 123
>gb|BP821683.1|BP821683 BP821683 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-58-O05 5',
mRNA sequence
Length = 390
Score = 124 bits (265), Expect = 5e-027
Identities = 51/88 (57%), Positives = 65/88 (73%)
Frame = -3 / +2
Query: 703 VSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGR 524
VS + G ++ + R MS+KL +GGL WG DD L++AF+SFGEVTEA VI DRETGR
Sbjct: 125 VSQSSNGPVTSMLGSLRYMSSKLLVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGR 304
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEID 440
SRGFGFV++S D+A AI MDGKE++
Sbjct: 305 SRGFGFVSFSCEDSANNAIKEMDGKELN 388
>gb|BP864844.1|BP864844 BP864844 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-72-A11 5',
mRNA sequence
Length = 386
Score = 102 bits (217), Expect(3) = 1e-026
Identities = 40/64 (62%), Positives = 49/64 (76%)
Frame = -3 / +1
Query: 670 VFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSD 491
+ + RLMSTKLFIGGL WG DD LR+A + FG+V +A+VI DRETGR RGFGF N++D
Sbjct: 136 MLGSLRLMSTKLFIGGLSWGTDDASLRDALAHFGDVVDAKVIVDRETGR*RGFGFANFND 315
Query: 490 SDAA 479
AA
Sbjct: 316 EGAA 327
Score = 29.0 bits (57), Expect(3) = 1e-026
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / +2
Query: 472 AISAMDGKEIDGRQVRV 422
AIS MDGKE+ GR RV
Sbjct: 335 AISHMDGKELTGRPTRV 385
Score = 29.0 bits (57), Expect(3) = 1e-026
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +1
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 49 LFFRMALCNKLGGLLRQNISSNG 117
>gb|BP849579.1|BP849579 BP849579 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-09-M04 5',
mRNA sequence
Length = 378
Score = 83.5 bits (176), Expect(3) = 1e-026
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -3 / +1
Query: 574 FGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGR 434
FG+V +A+VI DRETGRSRGFGFVN++D AA AIS MDGKE++GR
Sbjct: 238 FGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGR 378
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -3 / +3
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREAFSS 575
++ + RLMSTKLFIGGL WG DD LR+A +S
Sbjct: 138 SMLGSLRLMSTKLFIGGL*WGTDDASLRDALAS 236
Score = 25.8 bits (50), Expect(3) = 1e-026
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3 / +3
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGL R + G
Sbjct: 54 LFFRMALCNKLGGLWRQNISSKG 122
>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37
Length = 199667
Score = 65.7 bits (137), Expect(5) = 3e-026
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = -3 / +3
Query: 556 ARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGK 449
A+VI DRETGRSRGFGFVN++D AA AIS MDGK
Sbjct: 113790 AKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGK 113897
Score = 40.9 bits (83), Expect(5) = 3e-026
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -3 / +2
Query: 625 GLDWGVDDVKLREAFSSFGEVTEARV 548
GL WG DD LR+AF+ FG+V + ++
Sbjct: 113639 GLSWGTDDASLRDAFAHFGDVVDGKL 113716
Score = 32.7 bits (65), Expect(5) = 3e-026
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = -3 / +3
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
++ +E++GR +RVN AN+RP+ R
Sbjct: 113982 LEFQELNGRHIRVNPANDRPSAPR 114053
Score = 28.6 bits (56), Expect(5) = 3e-026
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3 / +1
Query: 673 AVFNAARLMSTKLFIGG 623
++ + RLMSTKLFIGG
Sbjct: 113494 SMLGSLRLMSTKLFIGG 113544
Score = 24.9 bits (48), Expect(5) = 3e-026
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3 / +1
Query: 751 MAAFNKLGGLLRHSALVSG 695
MA NKLGGLLR + +G
Sbjct: 113422 MAFCNKLGGLLRQNISSNG 113478
>emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project)
Length = 118718
Score = 65.7 bits (137), Expect(5) = 3e-026
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = -3 / +1
Query: 556 ARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGK 449
A+VI DRETGRSRGFGFVN++D AA AIS MDGK
Sbjct: 92698 AKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGK 92805
Score = 40.9 bits (83), Expect(5) = 3e-026
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -3 / +3
Query: 625 GLDWGVDDVKLREAFSSFGEVTEARV 548
GL WG DD LR+AF+ FG+V + ++
Sbjct: 92547 GLSWGTDDASLRDAFAHFGDVVDGKL 92624
Score = 32.7 bits (65), Expect(5) = 3e-026
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = -3 / +1
Query: 460 MDGKEIDGRQVRVNMANERPAGNR 389
++ +E++GR +RVN AN+RP+ R
Sbjct: 92890 LEFQELNGRHIRVNPANDRPSAPR 92961
Score = 28.6 bits (56), Expect(5) = 3e-026
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3 / +2
Query: 673 AVFNAARLMSTKLFIGG 623
++ + RLMSTKLFIGG
Sbjct: 92402 SMLGSLRLMSTKLFIGG 92452
Score = 24.9 bits (48), Expect(5) = 3e-026
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3 / +2
Query: 751 MAAFNKLGGLLRHSALVSG 695
MA NKLGGLLR + +G
Sbjct: 92330 MAFCNKLGGLLRQNISSNG 92386
>gb|BP812570.1|BP812570 BP812570 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-03-M09 5',
mRNA sequence
Length = 396
Score = 66.1 bits (138), Expect(4) = 5e-026
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = -3 / +2
Query: 595 LREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 470
L+ F+ FG+V +A+VI DRETGRSRGFGFVN++D AA A
Sbjct: 215 LKGCFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAA 340
Score = 47.8 bits (98), Expect(4) = 5e-026
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -3 / +3
Query: 673 AVFNAARLMSTKLFIGGLDWGVDDVKLREA 584
++ + R MSTKLFIGGL WG DD LR+A
Sbjct: 138 SMLGSLRWMSTKLFIGGLSWGTDDASLRDA 227
Score = 33.1 bits (66), Expect(4) = 5e-026
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3 / +3
Query: 469 ISAMDGKEIDGRQVRVN 419
IS MDGKE++GR +RVN
Sbjct: 342 ISEMDGKELNGRHIRVN 392
Score = 28.6 bits (56), Expect(4) = 5e-026
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 763 LVFAMAAFNKLGGLLRHSALVSG 695
L F MA NKLGGLLR + +G
Sbjct: 54 LFFRMAFCNKLGGLLRQNISSNG 122
>gb|BP821529.1|BP821529 BP821529 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-58-F24 5',
mRNA sequence
Length = 392
Score = 121 bits (258), Expect = 5e-026
Identities = 50/88 (56%), Positives = 66/88 (75%)
Frame = -3 / +1
Query: 703 VSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGR 524
VS + GS ++ + R+MS+KL++GGL WG DD L++A SSFGEVTEA VI +RE GR
Sbjct: 127 VSQSSNGSGISMVGSLRMMSSKLWVGGLSWGSDDSSLKQALSSFGEVTEATVIAEREKGR 306
Query: 523 SRGFGFVNYSDSDAAKEAISAMDGKEID 440
SRGFGFV++S D+A AI MDGKE++
Sbjct: 307 SRGFGFVSFSCEDSANNAIQEMDGKELN 390
>gb|AV518608.1|AV518608 AV518608 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD33g06F 3', mRNA
sequence
Length = 535
Score = 120 bits (257), Expect = 6e-026
Identities = 47/80 (58%), Positives = 62/80 (77%)
Frame = -3 / -1
Query: 640 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 461
++++G L W VD+ +L + FS G+V EARV+ DRETGRSRGFGFV SD D KEAISA
Sbjct: 406 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELKEAISA 227
Query: 460 MDGKEIDGRQVRVNMANERP 401
+DG+ ++GR +RVN+A ERP
Sbjct: 226 LDGQNLEGRAIRVNVAEERP 167
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,656,063,926
Number of Sequences: 1013581
Number of extensions: 21227558
Number of successful extensions: 121834
Number of sequences better than 1.0e-020: 403
length of database: 302,980,290
effective HSP length: 57
effective length of database: 245,206,173
effective search space used: 66696079056
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)