TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716323.2.2
(764 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY250835.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 346 5e-094
gb|AY136459.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 345 9e-094
emb|BX832101.1|CNS0A10J Arabidopsis thaliana Full-length cD... 345 9e-094
ref|NM_125733.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 345 9e-094
gb|BT010394.1| Arabidopsis thaliana At5g63380 mRNA, complet... 344 2e-093
gb|AY376731.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 344 2e-093
gb|AF360250.1| Arabidopsis thaliana unknown protein (At1g20... 310 3e-083
gb|AY040047.1| Arabidopsis thaliana unknown protein (At1g20... 310 3e-083
gb|AY250838.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 310 3e-083
ref|NM_101901.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 310 3e-083
emb|BX814596.1|CNS0ADI2 Arabidopsis thaliana Full-length cD... 309 5e-083
emb|BX814621.1|CNS0ADOY Arabidopsis thaliana Full-length cD... 308 1e-082
gb|BX836241.1|BX836241 BX836241 Arabidopsis thaliana Hormon... 257 1e-078
ref|NM_202143.1| Arabidopsis thaliana 4-coumarate-CoA ligas... 196 7e-078
emb|BX813596.1|CNS0ADNX Arabidopsis thaliana Full-length cD... 196 7e-078
ref|NM_101898.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 292 9e-078
gb|AY250833.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 290 3e-077
gb|AV520672.1|AV520672 AV520672 Arabidopsis thaliana aboveg... 283 4e-075
gb|AY091079.1| Arabidopsis thaliana putative 4-coumarate--C... 283 5e-075
gb|AY122950.1| Arabidopsis thaliana putative 4-coumarate--C... 283 5e-075
gb|AY250839.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 283 5e-075
ref|NM_116755.4| Arabidopsis thaliana 4-coumarate-CoA ligas... 283 5e-075
dbj|AK118041.1| Arabidopsis thaliana At5g38120 mRNA for put... 237 1e-074
ref|NM_123172.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 237 1e-074
gb|BT005689.1| Arabidopsis thaliana clone U50818 putative 4... 237 1e-074
gb|AY250832.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 237 1e-074
gb|AY376735.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 237 1e-074
emb|BX815999.1|CNS0ADB5 Arabidopsis thaliana Full-length cD... 215 3e-073
emb|BX814177.1|CNS0ADT8 Arabidopsis thaliana Full-length cD... 269 2e-072
gb|AV556332.1|AV556332 AV556332 Arabidopsis thaliana green ... 274 3e-072
emb|BX816812.1|CNS0AD1Q Arabidopsis thaliana Full-length cD... 268 6e-072
dbj|AK117362.1| Arabidopsis thaliana At4g19010 mRNA for put... 256 5e-067
ref|NM_118019.2| Arabidopsis thaliana 4-coumarate-CoA ligas... 256 5e-067
gb|BT005912.1| Arabidopsis thaliana At4g19010 gene, complet... 256 7e-067
gb|AY250834.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 256 7e-067
gb|AY376733.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 256 7e-067
emb|CQ803730.1| Sequence 141 from Patent WO2004035798 256 7e-067
emb|BX814850.1|CNS0ACYK Arabidopsis thaliana Full-length cD... 243 4e-063
gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis tha... 117 1e-062
emb|BX813547.1|CNS0ADKC Arabidopsis thaliana Full-length cD... 139 1e-061
gb|BX835589.1|BX835589 BX835589 Arabidopsis thaliana Adult ... 238 2e-061
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 117 9e-061
emb|AX461232.1| Sequence 161 from Patent WO0198480 95 1e-060
dbj|AB023035.1| Arabidopsis thaliana genomic DNA, chromosom... 100 3e-059
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 88 7e-059
gb|CB074237.1|CB074237 EST00751 Virulent Peronospora parasi... 229 7e-059
emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosom... 88 7e-059
emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosom... 88 7e-059
gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis tha... 88 7e-059
gb|AC012477.1|AC012477 Genomic Sequence For Arabidopsis tha... 88 7e-059
emb|AX059540.1| Sequence 273 from Patent WO0055325 88 8e-059
gb|AF106088.1|AF106088 Arabidopsis thaliana 4-coumarate:CoA... 228 1e-058
gb|AY058083.1| Arabidopsis thaliana At1g65060/F16G16_6 mRNA... 228 1e-058
gb|AY090306.1| Arabidopsis thaliana At1g65060/F16G16_6 mRNA... 228 1e-058
emb|AX412572.1| Sequence 336 from Patent WO0222675 228 1e-058
emb|AX506095.1| Sequence 790 from Patent WO0216655 228 1e-058
gb|AY376730.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 228 1e-058
ref|NM_105180.2| Arabidopsis thaliana 4CL3; 4-coumarate-CoA... 228 1e-058
gb|AF106086.1|AF106086 Arabidopsis thaliana 4-coumarate:CoA... 226 5e-058
gb|AY099695.1| Arabidopsis thaliana putative 4-coumarate:Co... 226 5e-058
gb|BT000296.1| Arabidopsis thaliana putative 4-coumarate:Co... 226 5e-058
emb|AX505882.1| Sequence 577 from Patent WO0216655 226 5e-058
gb|AY376728.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 226 5e-058
emb|BX822773.1|CNS0A78O Arabidopsis thaliana Full-length cD... 226 5e-058
ref|NM_113019.2| Arabidopsis thaliana 4CL2; 4-coumarate-CoA... 226 5e-058
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 147 6e-058
gb|U18675.1|ATU18675 Arabidopsis thaliana 4-coumarate--coen... 221 2e-056
gb|AY099747.1| Arabidopsis thaliana 4-coumarate:CoA ligase ... 221 2e-056
emb|AX505869.1| Sequence 564 from Patent WO0216655 221 2e-056
gb|AY250836.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 221 2e-056
gb|AY376729.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 221 2e-056
gb|AY376734.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 221 2e-056
emb|BX815525.1|CNS0AE0I Arabidopsis thaliana Full-length cD... 221 2e-056
ref|NM_104972.1| Arabidopsis thaliana 4-coumarate-CoA ligas... 221 2e-056
ref|NM_104046.2| Arabidopsis thaliana 4CL1 (4-COUMARATE:COA... 221 2e-056
emb|BX824573.1|CNS0A6WB Arabidopsis thaliana Full-length cD... 216 5e-055
gb|CB255235.1|CB255235 47-E018437-019-009-M11-T7R MPIZ-ADIS... 215 9e-055
gb|AY095992.1| Arabidopsis thaliana AT3g21230/MXL8_9 mRNA, ... 215 2e-054
gb|BT000614.1| Arabidopsis thaliana putative 4-coumarate:Co... 215 2e-054
gb|AY250837.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 215 2e-054
gb|AY376732.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 215 2e-054
emb|BX824596.1|CNS0A6SI Arabidopsis thaliana Full-length cD... 215 2e-054
emb|BX822898.1|CNS0A75P Arabidopsis thaliana Full-length cD... 215 2e-054
ref|NM_113018.3| Arabidopsis thaliana catalytic AT3G21230 m... 215 2e-054
emb|BX827081.1|CNS0A38R Arabidopsis thaliana Full-length cD... 138 5e-054
emb|BX823111.1|CNS0A76K Arabidopsis thaliana Full-length cD... 213 6e-054
ref|NM_179513.1| Arabidopsis thaliana 4CL3; 4-coumarate-CoA... 124 1e-053
dbj|AB005247.2| Arabidopsis thaliana genomic DNA, chromosom... 83 3e-053
emb|BX814606.1|CNS0ADL5 Arabidopsis thaliana Full-length cD... 210 4e-053
emb|BX823716.1|CNS0A6KI Arabidopsis thaliana Full-length cD... 210 6e-053
gb|AI997382.1|AI997382 701553708 A. thaliana, Columbia Col-... 206 7e-052
gb|BX836070.1|BX836070 BX836070 Arabidopsis thaliana Hormon... 205 1e-051
gb|CB253840.1|CB253840 86-E018437-019-009-K21-T7R MPIZ-ADIS... 204 2e-051
dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosom... 147 6e-050
gb|AF106085.1|AF106085 Arabidopsis thaliana 4-coumarate:CoA... 147 6e-050
emb|BX824168.1|CNS0A6ZK Arabidopsis thaliana Full-length cD... 195 2e-049
gb|BX835847.1|BX835847 BX835847 Arabidopsis thaliana Hormon... 198 2e-049
ref|NM_101899.3| Arabidopsis thaliana 4-coumarate-CoA ligas... 111 8e-049
gb|AI997890.1|AI997890 701671251 A. thaliana, Columbia Col-... 179 1e-048
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 147 8e-048
gb|AC011000.3|F16P17 Sequence of BAC F16P17 from Arabidopsi... 114 9e-048
emb|BX825074.1|CNS0A6ZC Arabidopsis thaliana Full-length cD... 191 2e-047
gb|AF106084.1|AF106084 Arabidopsis thaliana 4-coumarate:CoA... 147 2e-046
gb|AC025294.14|AC025294 Arabidopsis thaliana chromosome 1 B... 147 2e-043
gb|BX835730.1|BX835730 BX835730 Arabidopsis thaliana Adult ... 136 1e-042
gb|AV558307.1|AV558307 AV558307 Arabidopsis thaliana green ... 175 2e-042
emb|AL021711.2|ATF13C5 Arabidopsis thaliana DNA chromosome ... 83 2e-042
emb|BX814716.1|CNS0ADOJ Arabidopsis thaliana Full-length cD... 172 9e-042
emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosom... 83 2e-041
gb|BP584678.1|BP584678 BP584678 RAFL14 Arabidopsis thaliana... 169 1e-040
gb|BP578284.1|BP578284 BP578284 RAFL14 Arabidopsis thaliana... 168 2e-040
gb|AV817533.1|AV817533 AV817533 RAFL9 Arabidopsis thaliana ... 166 7e-040
gb|AF106087.1|AF106087 Arabidopsis thaliana 4-coumarate:CoA... 84 3e-039
gb|BP664326.1|BP664326 BP664326 RAFL21 Arabidopsis thaliana... 164 4e-039
gb|AU230141.1|AU230141 AU230141 RAFL19 Arabidopsis thaliana... 120 3e-038
gb|AV802214.1|AV802214 AV802214 RAFL9 Arabidopsis thaliana ... 160 3e-038
gb|AV810589.1|AV810589 AV810589 RAFL9 Arabidopsis thaliana ... 160 5e-038
gb|AV809888.1|AV809888 AV809888 RAFL9 Arabidopsis thaliana ... 159 9e-038
gb|AV532716.1|AV532716 AV532716 Arabidopsis thaliana flower... 156 6e-037
gb|BP787964.1|BP787964 BP787964 RAFL7 Arabidopsis thaliana ... 156 6e-037
gb|AC009360.3|F16G16 Arabidopsis thaliana chromosome 1 BAC ... 84 2e-036
gb|AV547257.1|AV547257 AV547257 Arabidopsis thaliana roots ... 152 1e-035
gb|BP781469.1|BP781469 BP781469 RAFL7 Arabidopsis thaliana ... 150 5e-035
gb|BP781934.1|BP781934 BP781934 RAFL7 Arabidopsis thaliana ... 150 5e-035
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 83 2e-034
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 147 3e-034
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 147 3e-034
gb|AY075622.1| Arabidopsis thaliana At1g51680/F19C24_11 mRN... 147 5e-034
gb|AY133582.1| Arabidopsis thaliana At1g51680/F19C24_11 mRN... 147 5e-034
ref|NM_179462.1| Arabidopsis thaliana 4CL1 (4-COUMARATE:COA... 147 5e-034
gb|BP564287.1|BP564287 BP564287 RAFL14 Arabidopsis thaliana... 86 6e-034
gb|BP650654.1|BP650654 BP650654 RAFL19 Arabidopsis thaliana... 146 6e-034
gb|AV558658.1|AV558658 AV558658 Arabidopsis thaliana green ... 139 1e-031
gb|AI999552.1|AI999552 701556371 A. thaliana, Columbia Col-... 124 2e-031
gb|BX835771.1|BX835771 BX835771 Arabidopsis thaliana Adult ... 117 6e-031
gb|BP793536.1|BP793536 BP793536 RAFL7 Arabidopsis thaliana ... 134 2e-030
ref|NM_114758.2| Arabidopsis thaliana AMP binding / catalyt... 109 3e-028
gb|AY088127.1| Arabidopsis thaliana clone 41541 mRNA, compl... 109 3e-028
gb|AY062759.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 109 3e-028
gb|AY050824.1| Arabidopsis thaliana putative 4-coumarate-Co... 109 3e-028
gb|BT003376.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 109 3e-028
gb|AY117254.1| Arabidopsis thaliana putative 4-coumarate-Co... 109 3e-028
emb|AX458785.1| Sequence 25 from Patent WO0209295 109 3e-028
gb|AF503762.1| Arabidopsis thaliana adenosine monophosphate... 109 3e-028
emb|BX822629.1|CNS0A76J Arabidopsis thaliana Full-length cD... 109 3e-028
gb|BP584375.1|BP584375 BP584375 RAFL14 Arabidopsis thaliana... 124 7e-028
gb|BP622052.1|BP622052 BP622052 RAFL17 Arabidopsis thaliana... 126 7e-028
gb|AY202973.1|AY202973 AY202973 Arabidopsis thaliana Landsb... 74 9e-028
gb|CL465040.1|CL465040 SAIL_1233_A01.v1 SAIL Collection Ara... 74 3e-027
gb|AV787325.1|AV787325 AV787325 RAFL6 Arabidopsis thaliana ... 121 2e-026
gb|AV563141.1|AV563141 AV563141 Arabidopsis thaliana green ... 121 3e-026
gb|AV799025.1|AV799025 AV799025 RAFL9 Arabidopsis thaliana ... 120 5e-026
gb|BP590061.1|BP590061 BP590061 RAFL15 Arabidopsis thaliana... 120 5e-026
gb|AV524325.1|AV524325 AV524325 Arabidopsis thaliana aboveg... 117 4e-025
gb|AV550302.1|AV550302 AV550302 Arabidopsis thaliana roots ... 109 2e-024
gb|BP610466.1|BP610466 BP610466 RAFL16 Arabidopsis thaliana... 112 1e-023
gb|BP597521.1|BP597521 BP597521 RAFL15 Arabidopsis thaliana... 83 2e-023
gb|AV814104.1|AV814104 AV814104 RAFL9 Arabidopsis thaliana ... 110 5e-023
gb|AV548209.1|AV548209 AV548209 Arabidopsis thaliana roots ... 110 5e-023
gb|AV813168.1|AV813168 AV813168 RAFL9 Arabidopsis thaliana ... 90 5e-023
gb|AC015447.8|AC015447 Arabidopsis thaliana chromosome I BA... 95 9e-023
gb|AY072217.1| Arabidopsis thaliana putative AMP-binding pr... 95 1e-022
ref|NM_102003.3| Arabidopsis thaliana catalytic AT1G21540 m... 95 1e-022
gb|AY133859.1| Arabidopsis thaliana clone U19398 putative a... 95 1e-022
emb|AX458791.1| Sequence 31 from Patent WO0209295 95 1e-022
gb|AF503768.1| Arabidopsis thaliana adenosine monophosphate... 95 1e-022
gb|AC004260.1| Arabidopsis thaliana chromosome I BAC T14N5 ... 93 1e-022
gb|AY064038.1| Arabidopsis thaliana unknown protein (At1g77... 93 1e-022
dbj|AK176377.1| Arabidopsis thaliana mRNA for hypothetical ... 93 1e-022
dbj|AK175648.1| Arabidopsis thaliana mRNA for hypothetical ... 93 1e-022
dbj|AK175665.1| Arabidopsis thaliana mRNA for hypothetical ... 93 1e-022
ref|NM_106373.2| Arabidopsis thaliana catalytic AT1G77240 m... 93 1e-022
gb|AV439568.1|AV439568 AV439568 Arabidopsis thaliana above-... 109 1e-022
gb|AV518010.1|AV518010 AV518010 Arabidopsis thaliana aboveg... 109 1e-022
gb|AV538726.1|AV538726 AV538726 Arabidopsis thaliana roots ... 109 1e-022
emb|AX458786.1| Sequence 26 from Patent WO0209295 93 1e-022
gb|AF503763.1| Arabidopsis thaliana adenosine monophosphate... 93 1e-022
emb|BX816525.1|CNS0AEL0 Arabidopsis thaliana Full-length cD... 91 2e-022
gb|BP619465.1|BP619465 BP619465 RAFL16 Arabidopsis thaliana... 108 2e-022
gb|AV551530.1|AV551530 AV551530 Arabidopsis thaliana roots ... 93 5e-022
emb|AX458792.1| Sequence 32 from Patent WO0209295 92 1e-021
gb|AF503769.1| Arabidopsis thaliana adenosine monophosphate... 92 1e-021
ref|NM_102002.2| Arabidopsis thaliana catalytic AT1G21530 m... 92 1e-021
gb|BP785335.1|BP785335 BP785335 RAFL7 Arabidopsis thaliana ... 105 2e-021
gb|BP596151.1|BP596151 BP596151 RAFL15 Arabidopsis thaliana... 57 3e-021
>gb|AY250835.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At5g63380)
mRNA, complete cds
Length = 1689
Score = 346 bits (750), Expect = 5e-094
Identities = 138/187 (73%), Positives = 166/187 (88%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG+++ ++EAKIVDPSTGE L PG+ GELW+RGPV+MKGYVG+++A+A TVD EGWLKT
Sbjct: 1129 SVGRISENMEAKIVDPSTGESLPPGKTGELWLRGPVIMKGYVGNEKASAETVDKEGWLKT 1308
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCYF+ + LYIVDRLKELIKYK YQVPP ELE IL+S+PD++DAAV+P+PDEDAG++
Sbjct: 1309 GDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELEQILHSNPDVIDAAVVPFPDEDAGEI 1488
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PMAFIVRKPGSNL E Q++DFVAKQVAPYKKVRRVAF++AIPK+PAGKILRREL + AV
Sbjct: 1489 PMAFIVRKPGSNLNEAQIIDFVAKQVAPYKKVRRVAFINAIPKNPAGKILRRELTKIAVD 1668
Query: 543 MGTXKL* 563
KL*
Sbjct: 1669 GNASKL* 1689
Score = 188 bits (404), Expect = 2e-046
Identities = 98/187 (52%), Positives = 107/187 (57%)
Frame = -2 / -2
Query: 562 QSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 383
QS TA SSRR+I PAG GIA KATR TFL GATCLATKSM C S+R PGF
Sbjct: 1688 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGATCLATKSMICASLRLLPGF 1509
Query: 382 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 203
LT+KAIG P G E RICS+S GGT* LY I+SF+RST+ S
Sbjct: 1508 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNSTGGT**ALYLISSFSRSTIYRKSSE 1329
Query: 202 LK*HRSPVFNQXXXXXXXXXXXXXXXXPFMTTGPRTQSSPRCPGPSTSPVEGSTIFASKC 23
K* RSPVFN PFM TGPR+QSSP PG SPV+GSTI AS
Sbjct: 1328 SK*QRSPVFNHPSLSTVSALAFSFPT*PFMMTGPRSQSSPVFPGGKDSPVDGSTILASIF 1149
Query: 22 DASFPTE 2
PTE
Sbjct: 1148 SEIRPTE 1128
Score = 152 bits (326), Expect = 1e-035
Identities = 68/167 (40%), Positives = 102/167 (61%)
Frame = -1 / -1
Query: 539 HGXLYKLPPQDLPSRRFGNCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 360
H KLP Q+L SR F +C K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 1665 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 1486
Query: 359 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVA*VTG 180
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ +T
Sbjct: 1485 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 1306
Query: 179 FQPAF*IHCCCSSLVVTDITFHDDWSSDPELAALPWPKHLAGGGIDD 39
P F ++C + +V+ ITFHDDWSS+PE + + +GG I++
Sbjct: 1305 L*PPFFVYCLRTRFLVSHITFHDDWSSEPEFTSFSRWQGFSGGWINN 1165
Score = 66.6 bits (139), Expect(2) = 5e-022
Identities = 32/87 (36%), Positives = 50/87 (57%)
Frame = +2 / +3
Query: 29 GGKDRRSLHXXXXXXXXXXXXLGPRTSRHERLCR*RRGYCSNSGFRRLVENR*PMLLQRG 208
G ++ S+H L PRTS HERLC R C +S RR+V++ * +L G
Sbjct: 1155 GSQNC*SIHRRILATGKNW*TLAPRTSHHERLCGKRESECGDSRQRRVVKDW*SLLF*FG 1334
Query: 209 WVTLHC*SVERVDKVQGISGTSCRTGA 289
+++C*S + +++QG+SG++ R GA
Sbjct: 1335 RFSIYC*SAKGANQIQGLSGSTGRVGA 1415
Score = 60.2 bits (125), Expect(2) = 5e-022
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +2 / +3
Query: 365 NGFYSEETRVKPYRATSHGFRG*TGRTLQESSSSGLCFCNSQIACWEDLAAGA 523
NGF+SE+TR + R+ +H FR *T ++QE +S CN + +CW+D A+GA
Sbjct: 1491 NGFHSEKTRKQSQRSANH*FRS*TSCSVQEGKTSCFYKCNPKKSCWQDSASGA 1649
>gb|AY136459.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At5g63380)
mRNA, complete cds
Length = 1895
Score = 345 bits (748), Expect = 9e-094
Identities = 137/192 (71%), Positives = 167/192 (86%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG+++ ++EAKIVDPSTGE L PG+ GELW+RGPV+MKGYVG+++A+A TVD EGWLKT
Sbjct: 1166 SVGRISENMEAKIVDPSTGESLPPGKTGELWLRGPVIMKGYVGNEKASAETVDKEGWLKT 1345
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCYF+ + LYIVDRLKELIKYK YQVPP ELE IL+S+PD++DAAV+P+PDEDAG++
Sbjct: 1346 GDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELEQILHSNPDVIDAAVVPFPDEDAGEI 1525
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PMAFIVRKPGSNL E Q++DFVAKQV PYKKVRRVAF++AIPK+PAGKILRREL + AV
Sbjct: 1526 PMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRVAFINAIPKNPAGKILRRELTKIAVD 1705
Query: 543 MGTXKL*SLKFI 578
KL* + +
Sbjct: 1706 GNASKL*DNRLV 1741
Score = 186 bits (400), Expect = 9e-046
Identities = 97/187 (51%), Positives = 106/187 (56%)
Frame = -2 / -3
Query: 562 QSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 383
QS TA SSRR+I PAG GIA KATR TFL G TCLATKSM C S+R PGF
Sbjct: 1725 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVTCLATKSMICASLRLLPGF 1546
Query: 382 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 203
LT+KAIG P G E RICS+S GGT* LY I+SF+RST+ S
Sbjct: 1545 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNSTGGT**ALYLISSFSRSTIYRKSSE 1366
Query: 202 LK*HRSPVFNQXXXXXXXXXXXXXXXXPFMTTGPRTQSSPRCPGPSTSPVEGSTIFASKC 23
K* RSPVFN PFM TGPR+QSSP PG SPV+GSTI AS
Sbjct: 1365 SK*QRSPVFNHPSLSTVSALAFSFPT*PFMMTGPRSQSSPVFPGGKDSPVDGSTILASIF 1186
Query: 22 DASFPTE 2
PTE
Sbjct: 1185 SEIRPTE 1165
Score = 152 bits (326), Expect = 1e-035
Identities = 68/167 (40%), Positives = 102/167 (61%)
Frame = -1 / -2
Query: 539 HGXLYKLPPQDLPSRRFGNCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 360
H KLP Q+L SR F +C K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 1702 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 1523
Query: 359 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVA*VTG 180
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ +T
Sbjct: 1522 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 1343
Query: 179 FQPAF*IHCCCSSLVVTDITFHDDWSSDPELAALPWPKHLAGGGIDD 39
P F ++C + +V+ ITFHDDWSS+PE + + +GG I++
Sbjct: 1342 L*PPFFVYCLRTRFLVSHITFHDDWSSEPEFTSFSRWQGFSGGWINN 1202
Score = 66.6 bits (139), Expect(2) = 3e-022
Identities = 32/87 (36%), Positives = 50/87 (57%)
Frame = +2 / +1
Query: 29 GGKDRRSLHXXXXXXXXXXXXLGPRTSRHERLCR*RRGYCSNSGFRRLVENR*PMLLQRG 208
G ++ S+H L PRTS HERLC R C +S RR+V++ * +L G
Sbjct: 1192 GSQNC*SIHRRILATGKNW*TLAPRTSHHERLCGKRESECGDSRQRRVVKDW*SLLF*FG 1371
Query: 209 WVTLHC*SVERVDKVQGISGTSCRTGA 289
+++C*S + +++QG+SG++ R GA
Sbjct: 1372 RFSIYC*SAKGANQIQGLSGSTGRVGA 1452
Score = 60.6 bits (126), Expect(2) = 3e-022
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +2 / +1
Query: 365 NGFYSEETRVKPYRATSHGFRG*TGRTLQESSSSGLCFCNSQIACWEDLAAGA 523
NGF+SE+TR + R+ +H FR *T ++QE +S CN + +CW+D A+GA
Sbjct: 1528 NGFHSEKTRKQSQRSANH*FRS*TSYSVQEGKTSCFYKCNPKKSCWQDSASGA 1686
>emb|BX832101.1|CNS0A10J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH51ZE03 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1833
Score = 345 bits (748), Expect = 9e-094
Identities = 137/192 (71%), Positives = 167/192 (86%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG+++ ++EAKIVDPSTGE L PG+ GELW+RGPV+MKGYVG+++A+A TVD EGWLKT
Sbjct: 1162 SVGRISENMEAKIVDPSTGESLPPGKTGELWLRGPVIMKGYVGNEKASAETVDKEGWLKT 1341
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCYF+ + LYIVDRLKELIKYK YQVPP ELE IL+S+PD++DAAV+P+PDEDAG++
Sbjct: 1342 GDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELEQILHSNPDVIDAAVVPFPDEDAGEI 1521
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PMAFIVRKPGSNL E Q++DFVAKQV PYKKVRRVAF++AIPK+PAGKILRREL + AV
Sbjct: 1522 PMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRVAFINAIPKNPAGKILRRELTKIAVD 1701
Query: 543 MGTXKL*SLKFI 578
KL* + +
Sbjct: 1702 GNASKL*DNRLV 1737
Score = 186 bits (400), Expect = 9e-046
Identities = 97/187 (51%), Positives = 106/187 (56%)
Frame = -2 / -2
Query: 562 QSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 383
QS TA SSRR+I PAG GIA KATR TFL G TCLATKSM C S+R PGF
Sbjct: 1721 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVTCLATKSMICASLRLLPGF 1542
Query: 382 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 203
LT+KAIG P G E RICS+S GGT* LY I+SF+RST+ S
Sbjct: 1541 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNSTGGT**ALYLISSFSRSTIYRKSSE 1362
Query: 202 LK*HRSPVFNQXXXXXXXXXXXXXXXXPFMTTGPRTQSSPRCPGPSTSPVEGSTIFASKC 23
K* RSPVFN PFM TGPR+QSSP PG SPV+GSTI AS
Sbjct: 1361 SK*QRSPVFNHPSLSTVSALAFSFPT*PFMMTGPRSQSSPVFPGGKDSPVDGSTILASIF 1182
Query: 22 DASFPTE 2
PTE
Sbjct: 1181 SEIRPTE 1161
Score = 152 bits (326), Expect = 1e-035
Identities = 68/167 (40%), Positives = 102/167 (61%)
Frame = -1 / -1
Query: 539 HGXLYKLPPQDLPSRRFGNCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 360
H KLP Q+L SR F +C K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 1698 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 1519
Query: 359 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVA*VTG 180
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ +T
Sbjct: 1518 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 1339
Query: 179 FQPAF*IHCCCSSLVVTDITFHDDWSSDPELAALPWPKHLAGGGIDD 39
P F ++C + +V+ ITFHDDWSS+PE + + +GG I++
Sbjct: 1338 L*PPFFVYCLRTRFLVSHITFHDDWSSEPEFTSFSRWQGFSGGWINN 1198
Score = 66.6 bits (139), Expect(2) = 3e-022
Identities = 32/87 (36%), Positives = 50/87 (57%)
Frame = +2 / +3
Query: 29 GGKDRRSLHXXXXXXXXXXXXLGPRTSRHERLCR*RRGYCSNSGFRRLVENR*PMLLQRG 208
G ++ S+H L PRTS HERLC R C +S RR+V++ * +L G
Sbjct: 1188 GSQNC*SIHRRILATGKNW*TLAPRTSHHERLCGKRESECGDSRQRRVVKDW*SLLF*FG 1367
Query: 209 WVTLHC*SVERVDKVQGISGTSCRTGA 289
+++C*S + +++QG+SG++ R GA
Sbjct: 1368 RFSIYC*SAKGANQIQGLSGSTGRVGA 1448
Score = 60.6 bits (126), Expect(2) = 3e-022
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +2 / +3
Query: 365 NGFYSEETRVKPYRATSHGFRG*TGRTLQESSSSGLCFCNSQIACWEDLAAGA 523
NGF+SE+TR + R+ +H FR *T ++QE +S CN + +CW+D A+GA
Sbjct: 1524 NGFHSEKTRKQSQRSANH*FRS*TSYSVQEGKTSCFYKCNPKKSCWQDSASGA 1682
>ref|NM_125733.2| Arabidopsis thaliana 4-coumarate-CoA ligase/ fatty-acyl-CoA synthase
AT5G63380 mRNA, complete cds
Length = 1896
Score = 345 bits (748), Expect = 9e-094
Identities = 137/192 (71%), Positives = 167/192 (86%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG+++ ++EAKIVDPSTGE L PG+ GELW+RGPV+MKGYVG+++A+A TVD EGWLKT
Sbjct: 1166 SVGRISENMEAKIVDPSTGESLPPGKTGELWLRGPVIMKGYVGNEKASAETVDKEGWLKT 1345
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCYF+ + LYIVDRLKELIKYK YQVPP ELE IL+S+PD++DAAV+P+PDEDAG++
Sbjct: 1346 GDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELEQILHSNPDVIDAAVVPFPDEDAGEI 1525
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PMAFIVRKPGSNL E Q++DFVAKQV PYKKVRRVAF++AIPK+PAGKILRREL + AV
Sbjct: 1526 PMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRVAFINAIPKNPAGKILRRELTKIAVD 1705
Query: 543 MGTXKL*SLKFI 578
KL* + +
Sbjct: 1706 GNASKL*DNRLV 1741
Score = 186 bits (400), Expect = 9e-046
Identities = 97/187 (51%), Positives = 106/187 (56%)
Frame = -2 / -1
Query: 562 QSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 383
QS TA SSRR+I PAG GIA KATR TFL G TCLATKSM C S+R PGF
Sbjct: 1725 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVTCLATKSMICASLRLLPGF 1546
Query: 382 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 203
LT+KAIG P G E RICS+S GGT* LY I+SF+RST+ S
Sbjct: 1545 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNSTGGT**ALYLISSFSRSTIYRKSSE 1366
Query: 202 LK*HRSPVFNQXXXXXXXXXXXXXXXXPFMTTGPRTQSSPRCPGPSTSPVEGSTIFASKC 23
K* RSPVFN PFM TGPR+QSSP PG SPV+GSTI AS
Sbjct: 1365 SK*QRSPVFNHPSLSTVSALAFSFPT*PFMMTGPRSQSSPVFPGGKDSPVDGSTILASIF 1186
Query: 22 DASFPTE 2
PTE
Sbjct: 1185 SEIRPTE 1165
Score = 152 bits (326), Expect = 1e-035
Identities = 68/167 (40%), Positives = 102/167 (61%)
Frame = -1 / -3
Query: 539 HGXLYKLPPQDLPSRRFGNCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 360
H KLP Q+L SR F +C K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 1702 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 1523
Query: 359 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVA*VTG 180
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ +T
Sbjct: 1522 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 1343
Query: 179 FQPAF*IHCCCSSLVVTDITFHDDWSSDPELAALPWPKHLAGGGIDD 39
P F ++C + +V+ ITFHDDWSS+PE + + +GG I++
Sbjct: 1342 L*PPFFVYCLRTRFLVSHITFHDDWSSEPEFTSFSRWQGFSGGWINN 1202
Score = 66.6 bits (139), Expect(2) = 3e-022
Identities = 32/87 (36%), Positives = 50/87 (57%)
Frame = +2 / +1
Query: 29 GGKDRRSLHXXXXXXXXXXXXLGPRTSRHERLCR*RRGYCSNSGFRRLVENR*PMLLQRG 208
G ++ S+H L PRTS HERLC R C +S RR+V++ * +L G
Sbjct: 1192 GSQNC*SIHRRILATGKNW*TLAPRTSHHERLCGKRESECGDSRQRRVVKDW*SLLF*FG 1371
Query: 209 WVTLHC*SVERVDKVQGISGTSCRTGA 289
+++C*S + +++QG+SG++ R GA
Sbjct: 1372 RFSIYC*SAKGANQIQGLSGSTGRVGA 1452
Score = 60.6 bits (126), Expect(2) = 3e-022
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +2 / +1
Query: 365 NGFYSEETRVKPYRATSHGFRG*TGRTLQESSSSGLCFCNSQIACWEDLAAGA 523
NGF+SE+TR + R+ +H FR *T ++QE +S CN + +CW+D A+GA
Sbjct: 1528 NGFHSEKTRKQSQRSANH*FRS*TSYSVQEGKTSCFYKCNPKKSCWQDSASGA 1686
>gb|BT010394.1| Arabidopsis thaliana At5g63380 mRNA, complete cds
Length = 1689
Score = 344 bits (746), Expect = 2e-093
Identities = 137/187 (73%), Positives = 165/187 (88%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG+++ ++EAKIVDPSTGE L PG+ GELW+RGPV+MKGYVG+++A+A TVD EGWLKT
Sbjct: 1129 SVGRISENMEAKIVDPSTGESLPPGKTGELWLRGPVIMKGYVGNEKASAETVDKEGWLKT 1308
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCYF+ + LYIVDRLKELIKYK YQVPP ELE IL+S+PD++DAAV+P+PDEDAG++
Sbjct: 1309 GDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELEQILHSNPDVIDAAVVPFPDEDAGEI 1488
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PMAFIVRKPGSNL E Q++DFVAKQV PYKKVRRVAF++AIPK+PAGKILRREL + AV
Sbjct: 1489 PMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRVAFINAIPKNPAGKILRRELTKIAVD 1668
Query: 543 MGTXKL* 563
KL*
Sbjct: 1669 GNASKL* 1689
Score = 186 bits (400), Expect = 9e-046
Identities = 97/187 (51%), Positives = 106/187 (56%)
Frame = -2 / -2
Query: 562 QSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 383
QS TA SSRR+I PAG GIA KATR TFL G TCLATKSM C S+R PGF
Sbjct: 1688 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVTCLATKSMICASLRLLPGF 1509
Query: 382 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 203
LT+KAIG P G E RICS+S GGT* LY I+SF+RST+ S
Sbjct: 1508 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNSTGGT**ALYLISSFSRSTIYRKSSE 1329
Query: 202 LK*HRSPVFNQXXXXXXXXXXXXXXXXPFMTTGPRTQSSPRCPGPSTSPVEGSTIFASKC 23
K* RSPVFN PFM TGPR+QSSP PG SPV+GSTI AS
Sbjct: 1328 SK*QRSPVFNHPSLSTVSALAFSFPT*PFMMTGPRSQSSPVFPGGKDSPVDGSTILASIF 1149
Query: 22 DASFPTE 2
PTE
Sbjct: 1148 SEIRPTE 1128
Score = 152 bits (326), Expect = 1e-035
Identities = 68/167 (40%), Positives = 102/167 (61%)
Frame = -1 / -1
Query: 539 HGXLYKLPPQDLPSRRFGNCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 360
H KLP Q+L SR F +C K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 1665 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 1486
Query: 359 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVA*VTG 180
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ +T
Sbjct: 1485 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 1306
Query: 179 FQPAF*IHCCCSSLVVTDITFHDDWSSDPELAALPWPKHLAGGGIDD 39
P F ++C + +V+ ITFHDDWSS+PE + + +GG I++
Sbjct: 1305 L*PPFFVYCLRTRFLVSHITFHDDWSSEPEFTSFSRWQGFSGGWINN 1165
Score = 66.6 bits (139), Expect(2) = 3e-022
Identities = 32/87 (36%), Positives = 50/87 (57%)
Frame = +2 / +3
Query: 29 GGKDRRSLHXXXXXXXXXXXXLGPRTSRHERLCR*RRGYCSNSGFRRLVENR*PMLLQRG 208
G ++ S+H L PRTS HERLC R C +S RR+V++ * +L G
Sbjct: 1155 GSQNC*SIHRRILATGKNW*TLAPRTSHHERLCGKRESECGDSRQRRVVKDW*SLLF*FG 1334
Query: 209 WVTLHC*SVERVDKVQGISGTSCRTGA 289
+++C*S + +++QG+SG++ R GA
Sbjct: 1335 RFSIYC*SAKGANQIQGLSGSTGRVGA 1415
Score = 60.6 bits (126), Expect(2) = 3e-022
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +2 / +3
Query: 365 NGFYSEETRVKPYRATSHGFRG*TGRTLQESSSSGLCFCNSQIACWEDLAAGA 523
NGF+SE+TR + R+ +H FR *T ++QE +S CN + +CW+D A+GA
Sbjct: 1491 NGFHSEKTRKQSQRSANH*FRS*TSYSVQEGKTSCFYKCNPKKSCWQDSASGA 1649
>gb|AY376731.1| Arabidopsis thaliana 4-coumarate CoA ligase isoform 4 mRNA, complete
cds
Length = 1689
Score = 344 bits (746), Expect = 2e-093
Identities = 137/187 (73%), Positives = 165/187 (88%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG+++ ++EAKIVDPSTGE L PG+ GELW+RGPV+MKGYVG+++A+A TVD EGWLKT
Sbjct: 1129 SVGRISENMEAKIVDPSTGESLPPGKTGELWLRGPVIMKGYVGNEKASAETVDKEGWLKT 1308
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCYF+ + LYIVDRLKELIKYK YQVPP ELE IL+S+PD++DAAV+P+PDEDAG++
Sbjct: 1309 GDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELEQILHSNPDVIDAAVVPFPDEDAGEI 1488
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PMAFIVRKPGSNL E Q++DFVAKQV PYKKVRRVAF++AIPK+PAGKILRREL + AV
Sbjct: 1489 PMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRVAFINAIPKNPAGKILRRELTKIAVD 1668
Query: 543 MGTXKL* 563
KL*
Sbjct: 1669 GNASKL* 1689
Score = 186 bits (400), Expect = 9e-046
Identities = 97/187 (51%), Positives = 106/187 (56%)
Frame = -2 / -2
Query: 562 QSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 383
QS TA SSRR+I PAG GIA KATR TFL G TCLATKSM C S+R PGF
Sbjct: 1688 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVTCLATKSMICASLRLLPGF 1509
Query: 382 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 203
LT+KAIG P G E RICS+S GGT* LY I+SF+RST+ S
Sbjct: 1508 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNSTGGT**ALYLISSFSRSTIYRKSSE 1329
Query: 202 LK*HRSPVFNQXXXXXXXXXXXXXXXXPFMTTGPRTQSSPRCPGPSTSPVEGSTIFASKC 23
K* RSPVFN PFM TGPR+QSSP PG SPV+GSTI AS
Sbjct: 1328 SK*QRSPVFNHPSLSTVSALAFSFPT*PFMMTGPRSQSSPVFPGGKDSPVDGSTILASIF 1149
Query: 22 DASFPTE 2
PTE
Sbjct: 1148 SEIRPTE 1128
Score = 152 bits (326), Expect = 1e-035
Identities = 68/167 (40%), Positives = 102/167 (61%)
Frame = -1 / -1
Query: 539 HGXLYKLPPQDLPSRRFGNCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 360
H KLP Q+L SR F +C K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 1665 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 1486
Query: 359 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVA*VTG 180
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ +T
Sbjct: 1485 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 1306
Query: 179 FQPAF*IHCCCSSLVVTDITFHDDWSSDPELAALPWPKHLAGGGIDD 39
P F ++C + +V+ ITFHDDWSS+PE + + +GG I++
Sbjct: 1305 L*PPFFVYCLRTRFLVSHITFHDDWSSEPEFTSFSRWQGFSGGWINN 1165
Score = 66.6 bits (139), Expect(2) = 3e-022
Identities = 32/87 (36%), Positives = 50/87 (57%)
Frame = +2 / +3
Query: 29 GGKDRRSLHXXXXXXXXXXXXLGPRTSRHERLCR*RRGYCSNSGFRRLVENR*PMLLQRG 208
G ++ S+H L PRTS HERLC R C +S RR+V++ * +L G
Sbjct: 1155 GSQNC*SIHRRILATGKNW*TLAPRTSHHERLCGKRESECGDSRQRRVVKDW*SLLF*FG 1334
Query: 209 WVTLHC*SVERVDKVQGISGTSCRTGA 289
+++C*S + +++QG+SG++ R GA
Sbjct: 1335 RFSIYC*SAKGANQIQGLSGSTGRVGA 1415
Score = 60.6 bits (126), Expect(2) = 3e-022
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +2 / +3
Query: 365 NGFYSEETRVKPYRATSHGFRG*TGRTLQESSSSGLCFCNSQIACWEDLAAGA 523
NGF+SE+TR + R+ +H FR *T ++QE +S CN + +CW+D A+GA
Sbjct: 1491 NGFHSEKTRKQSQRSANH*FRS*TSYSVQEGKTSCFYKCNPKKSCWQDSASGA 1649
>gb|AF360250.1| Arabidopsis thaliana unknown protein (At1g20510) mRNA, complete cds
Length = 1856
Score = 310 bits (672), Expect = 3e-083
Identities = 116/180 (64%), Positives = 159/180 (88%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
+ GKL++ +E +IVDP TG++LGP Q GELW++GP +MKGY ++EAT++T+DSEGWL+T
Sbjct: 1100 TAGKLSASMEGRIVDPVTGQILGPKQTGELWLKGPSIMKGYFSNEEATSSTLDSEGWLRT 1279
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCY +EDG +++VDRLKELIKYKGYQV PAELE +L +HP+I DAAVIP+PD++ GQ
Sbjct: 1280 GDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQF 1459
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VAFVS+IPK+P+GKILR++L++ A S
Sbjct: 1460 PMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDLIKIATS 1639
Score = 111 bits (236), Expect(2) = 1e-029
Identities = 60/124 (48%), Positives = 68/124 (54%)
Frame = -2 / -3
Query: 544 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 365
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 1641 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 1462
Query: 364 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRS 185
G+CP G* SSSAG T* PLY I+SFNRST NPSS * RS
Sbjct: 1461 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 1282
Query: 184 PVFN 173
PV N
Sbjct: 1281 PVLN 1270
Score = 41.4 bits (84), Expect(2) = 1e-029
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2 / -3
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
F+ GP +QSSP C GP PV GSTI S +FP
Sbjct: 1215 FIMEGPLSQSSPVCFGPRI*PVTGSTILPSILADNFP 1105
>gb|AY040047.1| Arabidopsis thaliana unknown protein (At1g20510) mRNA, complete cds
Length = 1641
Score = 310 bits (672), Expect = 3e-083
Identities = 116/180 (64%), Positives = 159/180 (88%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
+ GKL++ +E +IVDP TG++LGP Q GELW++GP +MKGY ++EAT++T+DSEGWL+T
Sbjct: 1087 TAGKLSASMEGRIVDPVTGQILGPKQTGELWLKGPSIMKGYFSNEEATSSTLDSEGWLRT 1266
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCY +EDG +++VDRLKELIKYKGYQV PAELE +L +HP+I DAAVIP+PD++ GQ
Sbjct: 1267 GDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQF 1446
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VAFVS+IPK+P+GKILR++L++ A S
Sbjct: 1447 PMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDLIKIATS 1626
Score = 111 bits (236), Expect(2) = 1e-029
Identities = 60/124 (48%), Positives = 68/124 (54%)
Frame = -2 / -2
Query: 544 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 365
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 1628 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 1449
Query: 364 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRS 185
G+CP G* SSSAG T* PLY I+SFNRST NPSS * RS
Sbjct: 1448 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 1269
Query: 184 PVFN 173
PV N
Sbjct: 1268 PVLN 1257
Score = 41.4 bits (84), Expect(2) = 1e-029
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2 / -2
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
F+ GP +QSSP C GP PV GSTI S +FP
Sbjct: 1202 FIMEGPLSQSSPVCFGPRI*PVTGSTILPSILADNFP 1092
>gb|AY250838.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At1g20510)
mRNA, complete cds
Length = 1641
Score = 310 bits (672), Expect = 3e-083
Identities = 116/180 (64%), Positives = 159/180 (88%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
+ GKL++ +E +IVDP TG++LGP Q GELW++GP +MKGY ++EAT++T+DSEGWL+T
Sbjct: 1087 TAGKLSASMEGRIVDPVTGQILGPKQTGELWLKGPSIMKGYFSNEEATSSTLDSEGWLRT 1266
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCY +EDG +++VDRLKELIKYKGYQV PAELE +L +HP+I DAAVIP+PD++ GQ
Sbjct: 1267 GDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQF 1446
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VAFVS+IPK+P+GKILR++L++ A S
Sbjct: 1447 PMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDLIKIATS 1626
Score = 111 bits (236), Expect(2) = 1e-029
Identities = 60/124 (48%), Positives = 68/124 (54%)
Frame = -2 / -2
Query: 544 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 365
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 1628 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 1449
Query: 364 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRS 185
G+CP G* SSSAG T* PLY I+SFNRST NPSS * RS
Sbjct: 1448 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 1269
Query: 184 PVFN 173
PV N
Sbjct: 1268 PVLN 1257
Score = 41.4 bits (84), Expect(2) = 1e-029
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2 / -2
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
F+ GP +QSSP C GP PV GSTI S +FP
Sbjct: 1202 FIMEGPLSQSSPVCFGPRI*PVTGSTILPSILADNFP 1092
>ref|NM_101901.2| Arabidopsis thaliana 4-coumarate-CoA ligase AT1G20510 transcript
variant AT1G20510.1 mRNA, complete cds
Length = 1856
Score = 310 bits (672), Expect = 3e-083
Identities = 116/180 (64%), Positives = 159/180 (88%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
+ GKL++ +E +IVDP TG++LGP Q GELW++GP +MKGY ++EAT++T+DSEGWL+T
Sbjct: 1112 TAGKLSASMEGRIVDPVTGQILGPKQTGELWLKGPSIMKGYFSNEEATSSTLDSEGWLRT 1291
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCY +EDG +++VDRLKELIKYKGYQV PAELE +L +HP+I DAAVIP+PD++ GQ
Sbjct: 1292 GDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQF 1471
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VAFVS+IPK+P+GKILR++L++ A S
Sbjct: 1472 PMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDLIKIATS 1651
Score = 111 bits (236), Expect(2) = 1e-029
Identities = 60/124 (48%), Positives = 68/124 (54%)
Frame = -2 / -3
Query: 544 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 365
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 1653 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 1474
Query: 364 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRS 185
G+CP G* SSSAG T* PLY I+SFNRST NPSS * RS
Sbjct: 1473 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 1294
Query: 184 PVFN 173
PV N
Sbjct: 1293 PVLN 1282
Score = 41.4 bits (84), Expect(2) = 1e-029
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2 / -3
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
F+ GP +QSSP C GP PV GSTI S +FP
Sbjct: 1227 FIMEGPLSQSSPVCFGPRI*PVTGSTILPSILADNFP 1117
>emb|BX814596.1|CNS0ADI2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB83ZF04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1832
Score = 309 bits (670), Expect = 5e-083
Identities = 116/180 (64%), Positives = 159/180 (88%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
+ GKL++ +E +IVDP TG++LGP Q GELW++GP +MKGY ++EAT++T+DSEGWL+T
Sbjct: 1112 TAGKLSASMEGRIVDPVTGQILGPIQTGELWLKGPSIMKGYFSNEEATSSTLDSEGWLRT 1291
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCY +EDG +++VDRLKELIKYKGYQV PAELE +L +HP+I DAAVIP+PD++ GQ
Sbjct: 1292 GDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQF 1471
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VAFVS+IPK+P+GKILR++L++ A S
Sbjct: 1472 PMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDLIKIATS 1651
Score = 111 bits (236), Expect(2) = 8e-030
Identities = 60/124 (48%), Positives = 68/124 (54%)
Frame = -2 / -3
Query: 544 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 365
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 1653 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 1474
Query: 364 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRS 185
G+CP G* SSSAG T* PLY I+SFNRST NPSS * RS
Sbjct: 1473 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 1294
Query: 184 PVFN 173
PV N
Sbjct: 1293 PVLN 1282
Score = 41.8 bits (85), Expect(2) = 8e-030
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2 / -3
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
F+ GP +QSSP C GP PV GSTI S +FP
Sbjct: 1227 FIMEGPLSQSSPVCIGPRI*PVTGSTILPSILADNFP 1117
>emb|BX814621.1|CNS0ADOY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB85ZA10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1825
Score = 308 bits (667), Expect = 1e-082
Identities = 116/180 (64%), Positives = 158/180 (87%)
Frame = +3 / +3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
+ GKL++ +E +IVDP TG++LGP Q GELW++GP +MKGY ++EAT++T+DSEGWL+T
Sbjct: 1077 TAGKLSASMEGRIVDPVTGQILGPKQTGELWLKGPSIMKGYFSNEEATSSTLDSEGWLRT 1256
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCY +EDG +++VDRLKELIKYKGYQV PAELE +L +HP+I DAAVIP+PD++ GQ
Sbjct: 1257 GDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVGQF 1436
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VAFVS IPK+P+GKILR++L++ A S
Sbjct: 1437 PMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVS*IPKNPSGKILRKDLIKIATS 1616
Score = 109 bits (233), Expect(2) = 3e-029
Identities = 60/124 (48%), Positives = 68/124 (54%)
Frame = -2 / -1
Query: 544 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 365
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 1618 LEVAILMRSLRRILPEGFFGI*DTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 1439
Query: 364 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRS 185
G+CP G* SSSAG T* PLY I+SFNRST NPSS * RS
Sbjct: 1438 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 1259
Query: 184 PVFN 173
PV N
Sbjct: 1258 PVLN 1247
Score = 41.4 bits (84), Expect(2) = 3e-029
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2 / -1
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
F+ GP +QSSP C GP PV GSTI S +FP
Sbjct: 1192 FIMEGPLSQSSPVCFGPRI*PVTGSTILPSILADNFP 1082
>gb|BX836241.1|BX836241 BX836241 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH38ZD02 3PRIM,
mRNA sequence
Length = 877
Score = 257 bits (556), Expect(2) = 1e-078
Identities = 97/148 (65%), Positives = 132/148 (89%)
Frame = +3 / -1
Query: 99 RGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPA 278
+G +MKGY ++EAT++T+DSEGWL+TGDLCY +EDG +++VDRLKELIKYKGYQV PA
Sbjct: 604 QGSSIMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPA 425
Query: 279 ELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKV 458
ELE +L +HP+I DAAVIP+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++
Sbjct: 424 ELEALLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRI 245
Query: 459 RRVAFVSAIPKSPAGKILRRELVEXAVS 542
R+VAFVS+IPK+P+GKILR++L++ A S
Sbjct: 244 RKVAFVSSIPKNPSGKILRKDLIKIATS 161
Score = 111 bits (236), Expect(2) = 5e-029
Identities = 60/124 (48%), Positives = 68/124 (54%)
Frame = -2 / +3
Query: 544 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 365
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 159 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 338
Query: 364 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRS 185
G+CP G* SSSAG T* PLY I+SFNRST NPSS * RS
Sbjct: 339 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 518
Query: 184 PVFN 173
PV N
Sbjct: 519 PVLN 530
Score = 58.8 bits (122), Expect(2) = 1e-078
Identities = 20/35 (57%), Positives = 29/35 (82%)
Frame = +3 / -2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGP 107
+ GKL++ +E +IVDP TG++LGP Q GELW++GP
Sbjct: 699 TAGKLSASMEGRIVDPVTGQILGPKQTGELWLKGP 595
Score = 39.1 bits (79), Expect(2) = 5e-029
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = -2 / +2
Query: 106 GPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
GP +QSSP C GP PV GSTI S +FP
Sbjct: 596 GPLSQSSPVCFGPRI*PVTGSTILPSILADNFP 694
>ref|NM_202143.1| Arabidopsis thaliana 4-coumarate-CoA ligase AT1G20510 transcript
variant AT1G20510.2 mRNA, complete cds
Length = 1915
Score = 196 bits (422), Expect(2) = 7e-078
Identities = 73/111 (65%), Positives = 96/111 (86%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
+ GKL++ +E +IVDP TG++LGP Q GELW++GP +MKGY ++EAT++T+DSEGWL+T
Sbjct: 1100 TAGKLSASMEGRIVDPVTGQILGPKQTGELWLKGPSIMKGYFSNEEATSSTLDSEGWLRT 1279
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIP 335
GDLCY +EDG +++VDRLKELIKYKGYQV PAELE +L +HP+I DAAVIP
Sbjct: 1280 GDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIP 1432
Score = 117 bits (250), Expect(2) = 7e-078
Identities = 43/69 (62%), Positives = 63/69 (91%)
Frame = +3 / +2
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 515
+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VAFVS+IPK+P+GKILR
Sbjct: 1508 FPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILR 1687
Query: 516 RELVEXAVS 542
++L++ A S
Sbjct: 1688 KDLIKIATS 1714
Score = 65.2 bits (136), Expect(3) = 2e-025
Identities = 31/64 (48%), Positives = 38/64 (59%)
Frame = -2 / -2
Query: 544 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 365
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 1716 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 1537
Query: 364 GSCP 353
G+CP
Sbjct: 1536 GNCP 1525
Score = 55.1 bits (114), Expect(3) = 2e-025
Identities = 27/38 (71%), Positives = 28/38 (73%)
Frame = -2 / -2
Query: 286 SSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
SSSAG T* PLY I+SFNRST NPSS * RSPV N
Sbjct: 1383 SSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRSPVLN 1270
Score = 41.4 bits (84), Expect(3) = 2e-025
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2 / -2
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
F+ GP +QSSP C GP PV GSTI S +FP
Sbjct: 1215 FIMEGPLSQSSPVCFGPRI*PVTGSTILPSILADNFP 1105
>emb|BX813596.1|CNS0ADNX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB27ZA10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1850
Score = 196 bits (422), Expect(2) = 7e-078
Identities = 73/111 (65%), Positives = 96/111 (86%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
+ GKL++ +E +IVDP TG++LGP Q GELW++GP +MKGY ++EAT++T+DSEGWL+T
Sbjct: 1079 TAGKLSASMEGRIVDPVTGQILGPKQTGELWLKGPSIMKGYFSNEEATSSTLDSEGWLRT 1258
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIP 335
GDLCY +EDG +++VDRLKELIKYKGYQV PAELE +L +HP+I DAAVIP
Sbjct: 1259 GDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIP 1411
Score = 117 bits (250), Expect(2) = 7e-078
Identities = 43/69 (62%), Positives = 63/69 (91%)
Frame = +3 / +2
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 515
+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VAFVS+IPK+P+GKILR
Sbjct: 1487 FPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILR 1666
Query: 516 RELVEXAVS 542
++L++ A S
Sbjct: 1667 KDLIKIATS 1693
Score = 65.2 bits (136), Expect(3) = 2e-025
Identities = 31/64 (48%), Positives = 38/64 (59%)
Frame = -2 / -3
Query: 544 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 365
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 1695 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 1516
Query: 364 GSCP 353
G+CP
Sbjct: 1515 GNCP 1504
Score = 55.1 bits (114), Expect(3) = 2e-025
Identities = 27/38 (71%), Positives = 28/38 (73%)
Frame = -2 / -3
Query: 286 SSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
SSSAG T* PLY I+SFNRST NPSS * RSPV N
Sbjct: 1362 SSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRSPVLN 1249
Score = 41.4 bits (84), Expect(3) = 2e-025
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2 / -3
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
F+ GP +QSSP C GP PV GSTI S +FP
Sbjct: 1194 FIMEGPLSQSSPVCFGPRI*PVTGSTILPSILADNFP 1084
>ref|NM_101898.2| Arabidopsis thaliana 4-coumarate-CoA ligase AT1G20480 mRNA, complete
cds
Length = 2457
Score = 292 bits (632), Expect = 9e-078
Identities = 118/178 (66%), Positives = 144/178 (80%)
Frame = +3 / +3
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGD 188
G LA ++E KIVDP TG VLG Q GELW+R P VMKGY + EATA+T+DSEGWLKTGD
Sbjct: 1197 GLLAPNVEGKIVDPDTGRVLGVNQTGELWIRSPTVMKGYFKNKEATASTIDSEGWLKTGD 1376
Query: 189 LCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPM 368
LCY + DG +++VDRLKELIK GYQV PAELE +L +HP+I DAAVIP PD AGQ PM
Sbjct: 1377 LCYIDGDGFVFVVDRLKELIKCNGYQVAPAELEALLLAHPEIADAAVIPIPDMKAGQYPM 1556
Query: 369 AFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
A+IVRK GSNL+E ++M FVAKQV+PYKK+R+V F+++IPK+P+GKILRREL + S
Sbjct: 1557 AYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVTFLASIPKNPSGKILRRELTKLTTS 1730
Score = 103 bits (219), Expect(2) = 7e-026
Identities = 56/117 (47%), Positives = 62/117 (52%)
Frame = -2 / -3
Query: 523 SSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXX 344
SS KI P G LGI T R FL G TC AT M S + P FLTI AIG CP
Sbjct: 1711 SSLLKILPEGFLGIEAKNVTLRIFLYGDTCFATNPMISLSDKLLPTFLTIYAIGYCPAFM 1532
Query: 343 XXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
G* SSSAG T* PL+ ++SFN ST +NPS *H+SPVFN
Sbjct: 1531 SGMGITAASAISG*ASNNASSSAGAT**PLHLMSSFNLSTTKTNPSPSM*HKSPVFN 1361
Score = 36.3 bits (73), Expect(2) = 7e-026
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = -2 / -3
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
F+T G R SSP P T PV GSTI S AS P
Sbjct: 1306 FITVGLRIHSSPV*FTPKTRPVSGSTILPSTFGASKP 1196
>gb|AY250833.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At1g20480)
mRNA, complete cds
Length = 1698
Score = 290 bits (628), Expect = 3e-077
Identities = 117/178 (65%), Positives = 144/178 (80%)
Frame = +3 / +1
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGD 188
G LA ++E KIVDP TG VLG Q GELW+R P VMKGY + EATA+T+DSEGWLKTGD
Sbjct: 1156 GLLAPNVEGKIVDPDTGRVLGVNQTGELWIRSPTVMKGYFKNKEATASTIDSEGWLKTGD 1335
Query: 189 LCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPM 368
LCY + DG +++VDRLKELIK GYQV PAELE +L +HP+I DAAVIP PD AGQ P+
Sbjct: 1336 LCYIDGDGFVFVVDRLKELIKCNGYQVAPAELEALLLAHPEIADAAVIPIPDMKAGQYPV 1515
Query: 369 AFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
A+IVRK GSNL+E ++M FVAKQV+PYKK+R+V F+++IPK+P+GKILRREL + S
Sbjct: 1516 AYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVTFLASIPKNPSGKILRRELTKLTTS 1689
Score = 100 bits (214), Expect(2) = 3e-025
Identities = 55/117 (47%), Positives = 61/117 (52%)
Frame = -2 / -2
Query: 523 SSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXX 344
SS KI P G LGI T R FL G TC AT M S + P FLTI A G CP
Sbjct: 1670 SSLLKILPEGFLGIEAKNVTLRIFLYGDTCFATNPMISLSDKLLPTFLTIYATGYCPAFM 1491
Query: 343 XXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
G* SSSAG T* PL+ ++SFN ST +NPS *H+SPVFN
Sbjct: 1490 SGMGITAASAISG*ASNNASSSAGAT**PLHLMSSFNLSTTKTNPSPSM*HKSPVFN 1320
Score = 36.3 bits (73), Expect(2) = 3e-025
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = -2 / -2
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
F+T G R SSP P T PV GSTI S AS P
Sbjct: 1265 FITVGLRIHSSPV*FTPKTRPVSGSTILPSTFGASKP 1155
>gb|AV520672.1|AV520672 AV520672 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ28d01F 3', mRNA
sequence
Length = 596
Score = 283 bits (613), Expect = 4e-075
Identities = 113/157 (71%), Positives = 136/157 (86%)
Frame = +3 / -3
Query: 108 VVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELE 287
V+MKGYVG+++A+A TVD EGWLKTGDLCYF+ + LYIVDRLKELIKYK YQVPP ELE
Sbjct: 594 VIMKGYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVELE 415
Query: 288 HILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRV 467
IL+S+PD++DAAV+P+PDEDAG++PMAFIVRKPGSNL E Q++DFVAKQV PYKKVRRV
Sbjct: 414 QILHSNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRV 235
Query: 468 AFVSAIPKSPAGKILRRELVEXAVSMGTXKL*SLKFI 578
AF++AIPK+PAGKILRREL + AV KL* + +
Sbjct: 234 AFINAIPKNPAGKILRRELTKIAVDGNASKL*DNRLV 124
Score = 143 bits (306), Expect = 8e-033
Identities = 72/130 (55%), Positives = 79/130 (60%)
Frame = -2 / +2
Query: 562 QSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 383
QS TA SSRR+I PAG GIA KATR TFL G TCLATKSM C S+R PGF
Sbjct: 140 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVTCLATKSMICASLRLLPGF 319
Query: 382 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 203
LT+KAIG P G E RICS+S GGT* LY I+SF+RST+ S
Sbjct: 320 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNSTGGT**ALYLISSFSRSTIYRKSSE 499
Query: 202 LK*HRSPVFN 173
K* RSPVFN
Sbjct: 500 SK*QRSPVFN 529
Score = 133 bits (284), Expect = 9e-030
Identities = 60/144 (41%), Positives = 88/144 (61%)
Frame = -1 / +1
Query: 539 HGXLYKLPPQDLPSRRFGNCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 360
H KLP Q+L SR F +C K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 163 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 342
Query: 359 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVA*VTG 180
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ +T
Sbjct: 343 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 522
Query: 179 FQPAF*IHCCCSSLVVTDITFHDD 108
P F ++C + +V+ ITFHDD
Sbjct: 523 L*PPFFVYCLRTRFLVSHITFHDD 594
>gb|AY091079.1| Arabidopsis thaliana putative 4-coumarate--CoA ligase (At4g05160)
mRNA, complete cds
Length = 1788
Score = 283 bits (612), Expect = 5e-075
Identities = 111/176 (63%), Positives = 144/176 (81%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G LA +EA+IV TG+ P Q+GE+WVRGP +MKGY+ + +AT T+D + W+ T
Sbjct: 1129 SAGMLAPGVEAQIVSVETGKSQPPNQQGEIWVRGPNMMKGYLNNPQATKETIDKKSWVHT 1308
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDL YFNEDG LY+VDR+KELIKYKG+QV PAELE +L SHPDI+DA VIP+PDE+AG++
Sbjct: 1309 GDLGYFNEDGNLYVVDRIKELIKYKGFQVAPAELEGLLVSHPDILDAVVIPFPDEEAGEV 1488
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVE 530
P+AF+VR P S++TEQ + F+AKQVAPYK++RRV+F+S +PKS AGKILRRELV+
Sbjct: 1489 PIAFVVRSPNSSITEQDIQKFIAKQVAPYKRLRRVSFISLVPKSAAGKILRRELVQ 1656
>gb|AY122950.1| Arabidopsis thaliana putative 4-coumarate--CoA ligase (At4g05160)
mRNA, complete cds
Length = 1666
Score = 283 bits (612), Expect = 5e-075
Identities = 111/176 (63%), Positives = 144/176 (81%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G LA +EA+IV TG+ P Q+GE+WVRGP +MKGY+ + +AT T+D + W+ T
Sbjct: 1087 SAGMLAPGVEAQIVSVETGKSQPPNQQGEIWVRGPNMMKGYLNNPQATKETIDKKSWVHT 1266
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDL YFNEDG LY+VDR+KELIKYKG+QV PAELE +L SHPDI+DA VIP+PDE+AG++
Sbjct: 1267 GDLGYFNEDGNLYVVDRIKELIKYKGFQVAPAELEGLLVSHPDILDAVVIPFPDEEAGEV 1446
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVE 530
P+AF+VR P S++TEQ + F+AKQVAPYK++RRV+F+S +PKS AGKILRRELV+
Sbjct: 1447 PIAFVVRSPNSSITEQDIQKFIAKQVAPYKRLRRVSFISLVPKSAAGKILRRELVQ 1614
>gb|AY250839.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At4g05160)
mRNA, complete cds
Length = 1635
Score = 283 bits (612), Expect = 5e-075
Identities = 111/176 (63%), Positives = 144/176 (81%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G LA +EA+IV TG+ P Q+GE+WVRGP +MKGY+ + +AT T+D + W+ T
Sbjct: 1087 SAGMLAPGVEAQIVSVETGKSQPPNQQGEIWVRGPNMMKGYLNNPQATKETIDKKSWVHT 1266
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDL YFNEDG LY+VDR+KELIKYKG+QV PAELE +L SHPDI+DA VIP+PDE+AG++
Sbjct: 1267 GDLGYFNEDGNLYVVDRIKELIKYKGFQVAPAELEGLLVSHPDILDAVVIPFPDEEAGEV 1446
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVE 530
P+AF+VR P S++TEQ + F+AKQVAPYK++RRV+F+S +PKS AGKILRRELV+
Sbjct: 1447 PIAFVVRSPNSSITEQDIQKFIAKQVAPYKRLRRVSFISLVPKSAAGKILRRELVQ 1614
>ref|NM_116755.4| Arabidopsis thaliana 4-coumarate-CoA ligase/ fatty-acyl-CoA synthase
AT4G05160 mRNA, complete cds
Length = 1861
Score = 283 bits (612), Expect = 5e-075
Identities = 111/176 (63%), Positives = 144/176 (81%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G LA +EA+IV TG+ P Q+GE+WVRGP +MKGY+ + +AT T+D + W+ T
Sbjct: 1153 SAGMLAPGVEAQIVSVETGKSQPPNQQGEIWVRGPNMMKGYLNNPQATKETIDKKSWVHT 1332
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDL YFNEDG LY+VDR+KELIKYKG+QV PAELE +L SHPDI+DA VIP+PDE+AG++
Sbjct: 1333 GDLGYFNEDGNLYVVDRIKELIKYKGFQVAPAELEGLLVSHPDILDAVVIPFPDEEAGEV 1512
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVE 530
P+AF+VR P S++TEQ + F+AKQVAPYK++RRV+F+S +PKS AGKILRRELV+
Sbjct: 1513 PIAFVVRSPNSSITEQDIQKFIAKQVAPYKRLRRVSFISLVPKSAAGKILRRELVQ 1680
>dbj|AK118041.1| Arabidopsis thaliana At5g38120 mRNA for putative 4-coumarate--CoA
ligase, complete cds, clone: RAFL19-27-B18
Length = 1774
Score = 237 bits (512), Expect(2) = 1e-074
Identities = 89/129 (68%), Positives = 116/129 (89%)
Frame = +3 / +2
Query: 156 VDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIP 335
+ SEGWLKTGDLCY + DG L+IVDRLKELIKYKGYQVPPAELE +L +HPDI+DAAVIP
Sbjct: 1313 ITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIP 1492
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 515
+PD++AGQ PMA++ RKP SNL E++V+DF++KQVAPYKK+R+VAF+ +IPK+P+GK LR
Sbjct: 1493 FPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGKTLR 1672
Query: 516 RELVEXAVS 542
++L++ A+S
Sbjct: 1673 KDLIKFAIS 1699
Score = 65.2 bits (136), Expect(2) = 1e-074
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDE 140
+VG L+ +EA+IVDP+TG+V+G Q GELW++GP + KGY ++E
Sbjct: 1169 AVGLLSCGVEARIVDPNTGQVMGLNQTGELWLKGPSIAKGYFRNEE 1306
Score = 55.1 bits (114), Expect(3) = 3e-021
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 SSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
SSSAGGT PLY I+SFNRST+ NPS *HRSPV +
Sbjct: 1443 SSSAGGTW*PLYLISSFNRSTIKRNPSLSI*HRSPVLS 1330
Score = 53.3 bits (110), Expect(3) = 3e-021
Identities = 27/56 (48%), Positives = 30/56 (53%)
Frame = -2 / -2
Query: 520 SRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCP 353
S R + P G GI AT FL GATCL KS+T S R GF AIG+CP
Sbjct: 1677 SLRSVLPDGVFGIESINATFLIFLYGATCLEIKSITFFSQRLLSGFRAT*AIGNCP 1510
Score = 33.1 bits (66), Expect(3) = 3e-021
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -2 / -2
Query: 106 GPRTQSSPRCPGPSTSPVEGSTIFASKCDASFPT 5
GP +QSSP P T PV GSTI AS + PT
Sbjct: 1272 GPLSQSSPVWFKPMT*PVFGSTILASTPHDNNPT 1171
>ref|NM_123172.2| Arabidopsis thaliana 4-coumarate-CoA ligase AT5G38120 mRNA, complete
cds
Length = 1727
Score = 237 bits (512), Expect(2) = 1e-074
Identities = 89/129 (68%), Positives = 116/129 (89%)
Frame = +3 / +3
Query: 156 VDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIP 335
+ SEGWLKTGDLCY + DG L+IVDRLKELIKYKGYQVPPAELE +L +HPDI+DAAVIP
Sbjct: 1266 ITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIP 1445
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 515
+PD++AGQ PMA++ RKP SNL E++V+DF++KQVAPYKK+R+VAF+ +IPK+P+GK LR
Sbjct: 1446 FPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGKTLR 1625
Query: 516 RELVEXAVS 542
++L++ A+S
Sbjct: 1626 KDLIKFAIS 1652
Score = 65.2 bits (136), Expect(2) = 1e-074
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +3 / +3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDE 140
+VG L+ +EA+IVDP+TG+V+G Q GELW++GP + KGY ++E
Sbjct: 1122 AVGLLSCGVEARIVDPNTGQVMGLNQTGELWLKGPSIAKGYFRNEE 1259
Score = 55.1 bits (114), Expect(3) = 3e-021
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 SSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
SSSAGGT PLY I+SFNRST+ NPS *HRSPV +
Sbjct: 1396 SSSAGGTW*PLYLISSFNRSTIKRNPSLSI*HRSPVLS 1283
Score = 53.3 bits (110), Expect(3) = 3e-021
Identities = 27/56 (48%), Positives = 30/56 (53%)
Frame = -2 / -2
Query: 520 SRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCP 353
S R + P G GI AT FL GATCL KS+T S R GF AIG+CP
Sbjct: 1630 SLRSVLPDGVFGIESINATFLIFLYGATCLEIKSITFFSQRLLSGFRAT*AIGNCP 1463
Score = 33.1 bits (66), Expect(3) = 3e-021
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -2 / -2
Query: 106 GPRTQSSPRCPGPSTSPVEGSTIFASKCDASFPT 5
GP +QSSP P T PV GSTI AS + PT
Sbjct: 1225 GPLSQSSPVWFKPMT*PVFGSTILASTPHDNNPT 1124
>gb|BT005689.1| Arabidopsis thaliana clone U50818 putative 4-coumarate-CoA ligase
(At5g38120) mRNA, complete cds
Length = 1684
Score = 237 bits (512), Expect(2) = 1e-074
Identities = 89/129 (68%), Positives = 116/129 (89%)
Frame = +3 / +1
Query: 156 VDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIP 335
+ SEGWLKTGDLCY + DG L+IVDRLKELIKYKGYQVPPAELE +L +HPDI+DAAVIP
Sbjct: 1258 ITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIP 1437
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 515
+PD++AGQ PMA++ RKP SNL E++V+DF++KQVAPYKK+R+VAF+ +IPK+P+GK LR
Sbjct: 1438 FPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGKTLR 1617
Query: 516 RELVEXAVS 542
++L++ A+S
Sbjct: 1618 KDLIKFAIS 1644
Score = 65.2 bits (136), Expect(2) = 1e-074
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDE 140
+VG L+ +EA+IVDP+TG+V+G Q GELW++GP + KGY ++E
Sbjct: 1114 AVGLLSCGVEARIVDPNTGQVMGLNQTGELWLKGPSIAKGYFRNEE 1251
Score = 55.1 bits (114), Expect(3) = 3e-021
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 286 SSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
SSSAGGT PLY I+SFNRST+ NPS *HRSPV +
Sbjct: 1388 SSSAGGTW*PLYLISSFNRSTIKRNPSLSI*HRSPVLS 1275
Score = 53.3 bits (110), Expect(3) = 3e-021
Identities = 27/56 (48%), Positives = 30/56 (53%)
Frame = -2 / -3
Query: 520 SRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCP 353
S R + P G GI AT FL GATCL KS+T S R GF AIG+CP
Sbjct: 1622 SLRSVLPDGVFGIESINATFLIFLYGATCLEIKSITFFSQRLLSGFRAT*AIGNCP 1455
Score = 33.1 bits (66), Expect(3) = 3e-021
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -2 / -3
Query: 106 GPRTQSSPRCPGPSTSPVEGSTIFASKCDASFPT 5
GP +QSSP P T PV GSTI AS + PT
Sbjct: 1217 GPLSQSSPVWFKPMT*PVFGSTILASTPHDNNPT 1116
>gb|AY250832.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At5g38120)
mRNA, complete cds
Length = 1653
Score = 237 bits (512), Expect(2) = 1e-074
Identities = 89/129 (68%), Positives = 116/129 (89%)
Frame = +3 / +1
Query: 156 VDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIP 335
+ SEGWLKTGDLCY + DG L+IVDRLKELIKYKGYQVPPAELE +L +HPDI+DAAVIP
Sbjct: 1258 ITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIP 1437
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 515
+PD++AGQ PMA++ RKP SNL E++V+DF++KQVAPYKK+R+VAF+ +IPK+P+GK LR
Sbjct: 1438 FPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGKTLR 1617
Query: 516 RELVEXAVS 542
++L++ A+S
Sbjct: 1618 KDLIKFAIS 1644
Score = 65.2 bits (136), Expect(2) = 1e-074
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDE 140
+VG L+ +EA+IVDP+TG+V+G Q GELW++GP + KGY ++E
Sbjct: 1114 AVGLLSCGVEARIVDPNTGQVMGLNQTGELWLKGPSIAKGYFRNEE 1251
Score = 55.1 bits (114), Expect(3) = 3e-021
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 SSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
SSSAGGT PLY I+SFNRST+ NPS *HRSPV +
Sbjct: 1388 SSSAGGTW*PLYLISSFNRSTIKRNPSLSI*HRSPVLS 1275
Score = 53.3 bits (110), Expect(3) = 3e-021
Identities = 27/56 (48%), Positives = 30/56 (53%)
Frame = -2 / -2
Query: 520 SRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCP 353
S R + P G GI AT FL GATCL KS+T S R GF AIG+CP
Sbjct: 1622 SLRSVLPDGVFGIESINATFLIFLYGATCLEIKSITFFSQRLLSGFRAT*AIGNCP 1455
Score = 33.1 bits (66), Expect(3) = 3e-021
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -2 / -2
Query: 106 GPRTQSSPRCPGPSTSPVEGSTIFASKCDASFPT 5
GP +QSSP P T PV GSTI AS + PT
Sbjct: 1217 GPLSQSSPVWFKPMT*PVFGSTILASTPHDNNPT 1116
>gb|AY376735.1| Arabidopsis thaliana 4-coumarate CoA ligase isoform 11 mRNA, complete
cds
Length = 1653
Score = 237 bits (512), Expect(2) = 1e-074
Identities = 89/129 (68%), Positives = 116/129 (89%)
Frame = +3 / +1
Query: 156 VDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIP 335
+ SEGWLKTGDLCY + DG L+IVDRLKELIKYKGYQVPPAELE +L +HPDI+DAAVIP
Sbjct: 1258 ITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIP 1437
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 515
+PD++AGQ PMA++ RKP SNL E++V+DF++KQVAPYKK+R+VAF+ +IPK+P+GK LR
Sbjct: 1438 FPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGKTLR 1617
Query: 516 RELVEXAVS 542
++L++ A+S
Sbjct: 1618 KDLIKFAIS 1644
Score = 65.2 bits (136), Expect(2) = 1e-074
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDE 140
+VG L+ +EA+IVDP+TG+V+G Q GELW++GP + KGY ++E
Sbjct: 1114 AVGLLSCGVEARIVDPNTGQVMGLNQTGELWLKGPSIAKGYFRNEE 1251
Score = 55.1 bits (114), Expect(3) = 3e-021
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 SSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
SSSAGGT PLY I+SFNRST+ NPS *HRSPV +
Sbjct: 1388 SSSAGGTW*PLYLISSFNRSTIKRNPSLSI*HRSPVLS 1275
Score = 53.3 bits (110), Expect(3) = 3e-021
Identities = 27/56 (48%), Positives = 30/56 (53%)
Frame = -2 / -2
Query: 520 SRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCP 353
S R + P G GI AT FL GATCL KS+T S R GF AIG+CP
Sbjct: 1622 SLRSVLPDGVFGIESINATFLIFLYGATCLEIKSITFFSQRLLSGFRAT*AIGNCP 1455
Score = 33.1 bits (66), Expect(3) = 3e-021
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -2 / -2
Query: 106 GPRTQSSPRCPGPSTSPVEGSTIFASKCDASFPT 5
GP +QSSP P T PV GSTI AS + PT
Sbjct: 1217 GPLSQSSPVWFKPMT*PVFGSTILASTPHDNNPT 1116
>emb|BX815999.1|CNS0ADB5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH22ZA02 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1778
Score = 215 bits (463), Expect(2) = 3e-073
Identities = 81/122 (66%), Positives = 108/122 (88%)
Frame = +3 / +1
Query: 177 KTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAG 356
KTGDLCY +EDG L++VDRLKELIKYKGYQVPPAELE +L +HP I+DAAVIP+PD +AG
Sbjct: 1318 KTGDLCYIDEDGFLFVVDRLKELIKYKGYQVPPAELEALLIAHPHILDAAVIPFPDREAG 1497
Query: 357 QLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXA 536
Q PMA++ RKP SNL+E++V+DF++ QVAPYKK+R+VAF+S+IPK+ +GK LR++L++ +
Sbjct: 1498 QYPMAYVARKPESNLSEKEVIDFISNQVAPYKKIRKVAFISSIPKTASGKTLRKDLIKLS 1677
Query: 537 VS 542
S
Sbjct: 1678 TS 1683
Score = 88.1 bits (186), Expect(2) = 6e-021
Identities = 53/114 (46%), Positives = 58/114 (50%)
Frame = -2 / -1
Query: 520 SRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXXX 341
S R + P G+ AT FL GAT L KS+T S R GF AIG CP
Sbjct: 1661 SLRSVLPDAVFGMELMNATFLIFLYGAT*LEMKSITSFSERLLSGFRAT*AIGYCPASLS 1482
Query: 340 XXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPV 179
G* + SSSAGGT* PLY INSF+RST NPSS * RSPV
Sbjct: 1481 GNGITAASRMCG*AIKRASSSAGGT**PLYLINSFSRSTTNRNPSSSI*QRSPV 1320
Score = 83.1 bits (175), Expect(2) = 3e-073
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +3 / +2
Query: 27 LEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLK 179
+EA+IVDP TG V+G Q GELW++GP + KGY G++EAT T++ EGWLK
Sbjct: 1169 IEARIVDPDTGRVMGVNQPGELWLKGPSISKGYFGNEEATNETINLEGWLK 1321
Score = 35.0 bits (70), Expect(2) = 6e-021
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -2 / -3
Query: 106 GPRTQSSPRCPGPSTSPVEGSTIFAS 29
GP +QSSP P T PV GSTI AS
Sbjct: 1248 GPLSQSSPGWFTPMTRPVSGSTILAS 1171
>emb|BX814177.1|CNS0ADT8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB5ZF11 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1851
Score = 269 bits (582), Expect(2) = 2e-072
Identities = 108/162 (66%), Positives = 132/162 (81%)
Frame = +3 / +3
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGD 188
G LA ++E KIVDP TG VLG Q GELW+R P VMKGY + EATA+T+DSEGWLKTGD
Sbjct: 1194 GLLAPNVEGKIVDPDTGRVLGVNQTGELWIRSPTVMKGYFKNKEATASTIDSEGWLKTGD 1373
Query: 189 LCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPM 368
LCY + DG +++VDRLKELIK GYQV PAELE +L +HP+I DAAVIP PD AGQ PM
Sbjct: 1374 LCYIDGDGFVFVVDRLKELIKCNGYQVAPAELEALLLAHPEIADAAVIPIPDMKAGQYPM 1553
Query: 369 AFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKS 494
A+IVRK GSNL+E ++M FVAKQV+PYKK+R+V F+++IPK+
Sbjct: 1554 AYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVTFLASIPKN 1679
Score = 93.2 bits (197), Expect(2) = 7e-023
Identities = 50/106 (47%), Positives = 56/106 (52%)
Frame = -2 / -3
Query: 490 LGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXXXXXXXXXXXXX 311
LGI T R FL G TC AT M S + P FLTI AIG CP
Sbjct: 1675 LGIEAKNVTLRIFLYGDTCFATNPMISLSDKLLPTFLTIYAIGYCPAFMSGMGITAASAI 1496
Query: 310 XG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
G* SSSAG T* PL+ ++SFN ST +NPS *H+SPVFN
Sbjct: 1495 SG*ASNNASSSAGAT**PLHLMSSFNLSTTKTNPSPSM*HKSPVFN 1358
Score = 36.3 bits (73), Expect(2) = 7e-023
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = -2 / -3
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
F+T G R SSP P T PV GSTI S AS P
Sbjct: 1303 FITVGLRIHSSPV*FTPKTRPVSGSTILPSTFGASKP 1193
Score = 25.8 bits (50), Expect(2) = 2e-072
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +2
Query: 486 PKSPAGKILRRELVEXAVS 542
P+ +GKILRREL + S
Sbjct: 1670 PQKSSGKILRRELTKLTTS 1726
>gb|AV556332.1|AV556332 AV556332 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ040c12F 3', mRNA sequence
Length = 593
Score = 274 bits (592), Expect = 3e-072
Identities = 109/153 (71%), Positives = 132/153 (86%)
Frame = +3 / -1
Query: 120 GYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILN 299
GYVG+++A+A TVD EGWLKTGDLCYF+ + LYIVDRLKELIKYK YQVPP +LE IL+
Sbjct: 593 GYVGNEKASAKTVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQVPPVKLEQILH 414
Query: 300 SHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVS 479
S+PD++DAAV+P+PDEDAG++PMAFIVRKPGSNL E Q++DFVAKQV PYKKVRRVAF++
Sbjct: 413 SNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRVAFIN 234
Query: 480 AIPKSPAGKILRRELVEXAVSMGTXKL*SLKFI 578
AIPK+PAGKILRREL + AV KL* + +
Sbjct: 233 AIPKNPAGKILRRELTKIAVDGNASKL*DNRLV 135
Score = 140 bits (300), Expect = 5e-032
Identities = 71/130 (54%), Positives = 78/130 (60%)
Frame = -2 / +1
Query: 562 QSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGF 383
QS TA SSRR+I PAG GIA KATR TFL G TCLATKSM C S+R PGF
Sbjct: 151 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVTCLATKSMICASLRLLPGF 330
Query: 382 LTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSS 203
LT+KAIG P G E RICS+ GGT* LY I+SF+RST+ S
Sbjct: 331 LTMKAIGISPASSSGNGTTAASITSGFE*RICSNFTGGT**ALYLISSFSRSTIYRKSSE 510
Query: 202 LK*HRSPVFN 173
K* RSPVFN
Sbjct: 511 SK*QRSPVFN 540
Score = 120 bits (256), Expect = 6e-026
Identities = 56/140 (40%), Positives = 83/140 (59%)
Frame = -1 / +3
Query: 539 HGXLYKLPPQDLPSRRFGNCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWE 360
H KLP Q+L SR F +C K +S+ LV +LFS+EI+DL ++ WF HY+SHW
Sbjct: 174 HSDFSKLPTQNLASRIFWDCIYKSNSSYLLVRSNLFSYEINDLRFVEIASWFSHYESHWN 353
Query: 359 LPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVA*VTG 180
L + V RNNC ++ I +R++++LQ R LISLV L PINN+ +++ +T
Sbjct: 354 LSCILVRERNNCSINHIWIRVKNLLQLYRWNLISLVFD*LL*PINNI*KIFRIKITEITS 533
Query: 179 FQPAF*IHCCCSSLVVTDIT 120
P F ++C + V+ IT
Sbjct: 534 L*PPFFVYCLRTRFFVSHIT 593
>emb|BX816812.1|CNS0AD1Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH6ZA12 of Hormone Treated Callus of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1811
Score = 268 bits (579), Expect(2) = 6e-072
Identities = 107/162 (66%), Positives = 133/162 (82%)
Frame = +3 / +3
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGD 188
G LA ++E KIVDP TG VLG Q GELW+R P VMKG++ + EATA+T+DSEGWLKTGD
Sbjct: 1197 GLLAPNVEGKIVDPDTGRVLGVNQTGELWIRSPTVMKGHLKNKEATASTIDSEGWLKTGD 1376
Query: 189 LCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPM 368
LCY + DG +++VDRLKELIK GYQV PAELE +L +HP+I DAAVIP PD AGQ PM
Sbjct: 1377 LCYIDGDGFVFVVDRLKELIKCNGYQVAPAELEALLLAHPEIADAAVIPIPDMKAGQYPM 1556
Query: 369 AFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKS 494
A+IVRK GSNL+E ++M FVAKQV+PYKK+R+V F+++IPK+
Sbjct: 1557 AYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVTFLASIPKN 1682
Score = 93.2 bits (197), Expect(2) = 7e-023
Identities = 50/106 (47%), Positives = 56/106 (52%)
Frame = -2 / -2
Query: 490 LGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXXXXXXXXXXXXX 311
LGI T R FL G TC AT M S + P FLTI AIG CP
Sbjct: 1678 LGIEAKNVTLRIFLYGDTCFATNPMISLSDKLLPTFLTIYAIGYCPAFMSGMGITAASAI 1499
Query: 310 XG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
G* SSSAG T* PL+ ++SFN ST +NPS *H+SPVFN
Sbjct: 1498 SG*ASNNASSSAGAT**PLHLMSSFNLSTTKTNPSPSM*HKSPVFN 1361
Score = 36.3 bits (73), Expect(2) = 7e-023
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = -2 / -2
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
F+T G R SSP P T PV GSTI S AS P
Sbjct: 1306 FITVGLRIHSSPV*FTPKTRPVSGSTILPSTFGASKP 1196
Score = 25.8 bits (50), Expect(2) = 6e-072
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +2
Query: 486 PKSPAGKILRRELVEXAVS 542
P+ +GKILRREL + S
Sbjct: 1673 PQKSSGKILRRELTKLTTS 1729
>dbj|AK117362.1| Arabidopsis thaliana At4g19010 mRNA for putative 4-coumarate-CoA
ligase, complete cds, clone: RAFL16-93-E09
Length = 1954
Score = 256 bits (554), Expect = 5e-067
Identities = 102/196 (52%), Positives = 148/196 (75%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG LA +++AK+VD S+G L PG RGELW++GP VMKGY+ + +AT ++ + WL+T
Sbjct: 1169 SVGLLAPNMQAKVVDWSSGSFLPPGNRGELWIQGPGVMKGYLNNPKATQMSIVEDSWLRT 1348
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ YF+EDG L+IVDR+KE+IKYKG+Q+ PA+LE +L SHP I+DAAV P+E+ G++
Sbjct: 1349 GDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEAVLVSHPLIIDAAVTAAPNEECGEI 1528
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
P+AF+VR+ + L+E+ V+ +VA QVAPY+KVR+V V++IPKSP GKILR+EL +
Sbjct: 1529 PVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVVMVNSIPKSPTGKILRKELKRILTN 1708
Query: 543 MGTXKL*SLKFILTSK 590
+ +L* + +K
Sbjct: 1709 SVSSRL*FFLHLFGNK 1756
>ref|NM_118019.2| Arabidopsis thaliana 4-coumarate-CoA ligase AT4G19010 mRNA, complete
cds
Length = 1954
Score = 256 bits (554), Expect = 5e-067
Identities = 102/196 (52%), Positives = 148/196 (75%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG LA +++AK+VD S+G L PG RGELW++GP VMKGY+ + +AT ++ + WL+T
Sbjct: 1169 SVGLLAPNMQAKVVDWSSGSFLPPGNRGELWIQGPGVMKGYLNNPKATQMSIVEDSWLRT 1348
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ YF+EDG L+IVDR+KE+IKYKG+Q+ PA+LE +L SHP I+DAAV P+E+ G++
Sbjct: 1349 GDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEAVLVSHPLIIDAAVTAAPNEECGEI 1528
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
P+AF+VR+ + L+E+ V+ +VA QVAPY+KVR+V V++IPKSP GKILR+EL +
Sbjct: 1529 PVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVVMVNSIPKSPTGKILRKELKRILTN 1708
Query: 543 MGTXKL*SLKFILTSK 590
+ +L* + +K
Sbjct: 1709 SVSSRL*FFLHLFGNK 1756
>gb|BT005912.1| Arabidopsis thaliana At4g19010 gene, complete cds
Length = 1701
Score = 256 bits (553), Expect = 7e-067
Identities = 101/187 (54%), Positives = 145/187 (77%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG LA +++AK+VD S+G L PG RGELW++GP VMKGY+ + +AT ++ + WL+T
Sbjct: 1141 SVGLLAPNMQAKVVDWSSGSFLPPGNRGELWIQGPGVMKGYLNNPKATQMSIVEDSWLRT 1320
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ YF+EDG L+IVDR+KE+IKYKG+Q+ PA+LE +L SHP I+DAAV P+E+ G++
Sbjct: 1321 GDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEAVLVSHPLIIDAAVTAAPNEECGEI 1500
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
P+AF+VR+ + L+E+ V+ +VA QVAPY+KVR+V V++IPKSP GKILR+EL +
Sbjct: 1501 PVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVVMVNSIPKSPTGKILRKELKRILTN 1680
Query: 543 MGTXKL* 563
+ +L*
Sbjct: 1681 SVSSRL* 1701
>gb|AY250834.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At4g19010)
mRNA, complete cds
Length = 1701
Score = 256 bits (553), Expect = 7e-067
Identities = 101/187 (54%), Positives = 145/187 (77%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG LA +++AK+VD S+G L PG RGELW++GP VMKGY+ + +AT ++ + WL+T
Sbjct: 1141 SVGLLAPNMQAKVVDWSSGSFLPPGNRGELWIQGPGVMKGYLNNPKATQMSIVEDSWLRT 1320
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ YF+EDG L+IVDR+KE+IKYKG+Q+ PA+LE +L SHP I+DAAV P+E+ G++
Sbjct: 1321 GDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEAVLVSHPLIIDAAVTAAPNEECGEI 1500
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
P+AF+VR+ + L+E+ V+ +VA QVAPY+KVR+V V++IPKSP GKILR+EL +
Sbjct: 1501 PVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVVMVNSIPKSPTGKILRKELKRILTN 1680
Query: 543 MGTXKL* 563
+ +L*
Sbjct: 1681 SVSSRL* 1701
>gb|AY376733.1| Arabidopsis thaliana 4-coumarate CoA ligase isoform 7 mRNA, complete
cds
Length = 1701
Score = 256 bits (553), Expect = 7e-067
Identities = 101/187 (54%), Positives = 145/187 (77%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG LA +++AK+VD S+G L PG RGELW++GP VMKGY+ + +AT ++ + WL+T
Sbjct: 1141 SVGLLAPNMQAKVVDWSSGSFLPPGNRGELWIQGPGVMKGYLNNPKATQMSIVEDSWLRT 1320
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ YF+EDG L+IVDR+KE+IKYKG+Q+ PA+LE +L SHP I+DAAV P+E+ G++
Sbjct: 1321 GDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEAVLVSHPLIIDAAVTAAPNEECGEI 1500
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
P+AF+VR+ + L+E+ V+ +VA QVAPY+KVR+V V++IPKSP GKILR+EL +
Sbjct: 1501 PVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVVMVNSIPKSPTGKILRKELKRILTN 1680
Query: 543 MGTXKL* 563
+ +L*
Sbjct: 1681 SVSSRL* 1701
>emb|CQ803730.1| Sequence 141 from Patent WO2004035798
Length = 1701
Score = 256 bits (553), Expect = 7e-067
Identities = 101/187 (54%), Positives = 145/187 (77%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG LA +++AK+VD S+G L PG RGELW++GP VMKGY+ + +AT ++ + WL+T
Sbjct: 1141 SVGLLAPNMQAKVVDWSSGSFLPPGNRGELWIQGPGVMKGYLNNPKATQMSIVEDSWLRT 1320
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ YF+EDG L+IVDR+KE+IKYKG+Q+ PA+LE +L SHP I+DAAV P+E+ G++
Sbjct: 1321 GDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEAVLVSHPLIIDAAVTAAPNEECGEI 1500
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
P+AF+VR+ + L+E+ V+ +VA QVAPY+KVR+V V++IPKSP GKILR+EL +
Sbjct: 1501 PVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVVMVNSIPKSPTGKILRKELKRILTN 1680
Query: 543 MGTXKL* 563
+ +L*
Sbjct: 1681 SVSSRL* 1701
>emb|BX814850.1|CNS0ACYK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS11ZB06 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 624
Score = 243 bits (526), Expect = 4e-063
Identities = 92/140 (65%), Positives = 125/140 (89%)
Frame = +3 / +1
Query: 123 YVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNS 302
Y ++EAT++T+DSEGWL+TG LCY +EDG +++VDRLKELIKYKGYQV PAELE +L +
Sbjct: 1 YFSNEEATSSTLDSEGWLRTGGLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLT 180
Query: 303 HPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSA 482
HP+I DAAVIP+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VAFVS+
Sbjct: 181 HPEITDAAVIPFPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSS 360
Query: 483 IPKSPAGKILRRELVEXAVS 542
IPK+P+GKILR++L++ A S
Sbjct: 361 IPKNPSGKILRKDLIKIATS 420
Score = 108 bits (231), Expect = 2e-022
Identities = 59/124 (47%), Positives = 67/124 (54%)
Frame = -2 / -2
Query: 544 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 365
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 422 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 243
Query: 364 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRS 185
G+CP G* SSSAG T* PLY I+SFNRST NPSS * R
Sbjct: 242 GNCPTSLSGNGITAASVISG*VSNKASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRP 63
Query: 184 PVFN 173
PV N
Sbjct: 62 PVLN 51
>gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis thaliana BAC F5M15 from chromosome I,
complete sequence
Length = 99231
Score = 117 bits (250), Expect(4) = 1e-062
Identities = 43/69 (62%), Positives = 63/69 (91%)
Frame = +3 / +2
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 515
+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VAFVS+IPK+P+GKILR
Sbjct: 60791 FPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILR 60970
Query: 516 RELVEXAVS 542
++L++ A S
Sbjct: 60971 KDLIKIATS 60997
Score = 101 bits (215), Expect(4) = 1e-062
Identities = 36/52 (69%), Positives = 47/52 (90%)
Frame = +3 / +2
Query: 114 MKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
+ GY ++EAT++T+DSEGWL+TGDLCY +EDG +++VDRLKELIKYKGYQV
Sbjct: 60086 LAGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQV 60241
Score = 95.5 bits (202), Expect(5) = 2e-054
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = +3 / +3
Query: 117 KGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
+GY + EAT T++ EGWLKTGDLCY +EDG L++VDRLKELIKYKGYQV
Sbjct: 63405 EGYFKNQEATNETINLEGWLKTGDLCYIDEDGFLFVVDRLKELIKYKGYQV 63557
Score = 92.3 bits (195), Expect(5) = 1e-060
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = +3 / +1
Query: 120 GYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
GY + EATA+T+DSEGWLKTGDLCY + DG +++VDRLKELIK GYQV
Sbjct: 68944 GYFKNKEATASTIDSEGWLKTGDLCYIDGDGFVFVVDRLKELIKCNGYQV 69093
Score = 69.8 bits (146), Expect(4) = 1e-034
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +3 / +3
Query: 177 KTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
KTGDLCY +EDG L++VDRLKELIKYKGYQV
Sbjct: 66639 KTGDLCYIDEDGFLFVVDRLKELIKYKGYQV 66731
Score = 66.6 bits (139), Expect(4) = 1e-062
Identities = 23/40 (57%), Positives = 33/40 (82%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKG 122
+ GKL++ +E +IVDP TG++LGP Q GELW++GP +MKG
Sbjct: 59887 TAGKLSASMEGRIVDPVTGQILGPKQTGELWLKGPSIMKG 60006
Score = 63.4 bits (132), Expect(5) = 1e-060
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = +3 / +3
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKG 122
G LA ++E KIVDP TG VLG Q GELW+R P VMKG
Sbjct: 68739 GLLAPNVEGKIVDPDTGRVLGVNQTGELWIRSPTVMKG 68852
Score = 61.1 bits (127), Expect(4) = 1e-034
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKG 122
+VG L+S +EA+IVDP TG V+G Q GELW++GP + KG
Sbjct: 66095 AVGLLSSGIEARIVDPDTGRVMGVNQPGELWLKGPSISKG 66214
Score = 60.6 bits (126), Expect(5) = 2e-054
Identities = 22/35 (62%), Positives = 32/35 (91%)
Frame = +3 / +1
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+PD++AGQ PMA++VRK SNL+E+QV+DF++KQV
Sbjct: 63823 FPDKEAGQYPMAYVVRKHESNLSEKQVIDFISKQV 63927
Score = 60.2 bits (125), Expect(4) = 1e-034
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +3 / +2
Query: 294 LNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+ H A+ +PD +AGQ PMA++ RKP SNL+E++V+DF++ QV
Sbjct: 66920 IEKHVVCFFCALYRFPDREAGQYPMAYVARKPESNLSEKEVIDFISNQV 67066
Score = 58.8 bits (122), Expect(5) = 1e-060
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +3 / +3
Query: 339 PDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
PD AGQ PMA+IVRK GSNL+E ++M FVAKQV
Sbjct: 69372 PDMKAGQYPMAYIVRKVGSNLSESEIMGFVAKQV 69473
Score = 58.8 bits (122), Expect(5) = 2e-054
Identities = 21/37 (56%), Positives = 33/37 (89%)
Frame = +3 / +2
Query: 432 KQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
+QVAPYKK+R+VAF+S+IPK+ +GK LR++L++ + S
Sbjct: 67157 EQVAPYKKIRKVAFISSIPKTASGKTLRKDLIKLSTS 67267
Score = 57.9 bits (120), Expect(5) = 2e-054
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYV 128
+ G L S +EA+IVDP+TG +G Q GELW++GP + KG +
Sbjct: 62914 TAGTLTSDVEARIVDPNTGRFMGINQTGELWLKGPSISKGKI 63039
Score = 57.4 bits (119), Expect(5) = 1e-060
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +3 / +2
Query: 438 VAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
V+PYKK+R+V F+++IPK+P+GKILRREL + S
Sbjct: 69566 VSPYKKIRKVTFLASIPKNPSGKILRRELTKLTTS 69670
Score = 48.3 bits (99), Expect(5) = 2e-054
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +3 / +3
Query: 264 QVPPAELEHILNSHPDIMDAAVIP 335
QVPPAELE +L +HPDI+DAAVIP
Sbjct: 63636 QVPPAELEALLITHPDILDAAVIP 63707
Score = 39.1 bits (79), Expect(5) = 1e-060
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3 / +2
Query: 267 VPPAELEHILNSHPDIMDAAVIP 335
V PAELE +L +HP+I DAAVIP
Sbjct: 69194 VAPAELEALLLAHPEIADAAVIP 69262
Score = 39.1 bits (79), Expect(4) = 1e-062
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3 / +2
Query: 267 VPPAELEHILNSHPDIMDAAVIP 335
V PAELE +L +HP+I DAAVIP
Sbjct: 60647 VAPAELEALLLTHPEITDAAVIP 60715
Score = 38.2 bits (77), Expect(4) = 1e-034
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3 / +1
Query: 108 VVMKGYVGDDEATAATVDSEGWLK 179
+ KGY G++EAT T++ EGWLK
Sbjct: 66571 ICFKGYFGNEEATNETINLEGWLK 66642
>emb|BX813547.1|CNS0ADKC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB23ZE10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1841
Score = 139 bits (298), Expect(3) = 1e-061
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +3 / +2
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGD 188
G LA ++E KIVDP TG VLG Q GELW+R P VMKGY + EATA+T+DSEGWLKTGD
Sbjct: 1193 GLLAPNVEGKIVDPDTGRVLGVNQTGELWIRSPTVMKGY*KNKEATASTIDSEGWLKTGD 1372
Query: 189 LCYFNEDGLLYIVDRLKELIK 251
LCY + DG +++VDRLKELIK
Sbjct: 1373 LCYIDGDGFVFVVDRLKELIK 1435
Score = 112 bits (240), Expect(3) = 1e-061
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = +3 / +3
Query: 273 PAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYK 452
PA L +HP+I DAAVIP PD AGQ PMA+IVRK GSNL+E ++M FVAKQV+PYK
Sbjct: 1455 PAN*RASLLAHPEIADAAVIPIPDMKAGQYPMAYIVRKVGSNLSESEIMGFVAKQVSPYK 1634
Query: 453 KVRRVAFVSAIPKS 494
K+R+V F+++IPK+
Sbjct: 1635 KIRKVTFLASIPKN 1676
Score = 25.8 bits (50), Expect(3) = 1e-061
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +2
Query: 486 PKSPAGKILRRELVEXAVS 542
P+ +GKILRREL + S
Sbjct: 1667 PQKSSGKILRRELTKLTTS 1723
>gb|BX835589.1|BX835589 BX835589 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS94ZD09 3PRIM, mRNA
sequence
Length = 538
Score = 238 bits (514), Expect = 2e-061
Identities = 90/133 (67%), Positives = 120/133 (90%)
Frame = +3 / -2
Query: 144 TAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDA 323
T++T+DSEGWL+TGDLCY +EDG +++VDRLKELIKYKGYQV PAELE +L +HP+I DA
Sbjct: 537 TSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDA 358
Query: 324 AVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAG 503
AVIP+PD++ GQ PMA++VRK GS+L+E +M+FVAKQVAPYK++R+VAFVS+IPK+P+G
Sbjct: 357 AVIPFPDKEVGQFPMAYVVRKTGSSLSENTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSG 178
Query: 504 KILRRELVEXAVS 542
KILR++L++ A S
Sbjct: 177 KILRKDLIKIATS 139
Score = 111 bits (236), Expect = 4e-023
Identities = 60/124 (48%), Positives = 68/124 (54%)
Frame = -2 / +2
Query: 544 MDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAI 365
++ A S R+I P G GI +TKAT R L GATC AT S+ S + P FLT AI
Sbjct: 137 LEVAILMRSLRRILPEGFFGIEDTKATFRILLYGATCFATNSIIVFSDKLLPVFLTTYAI 316
Query: 364 GSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRS 185
G+CP G* SSSAG T* PLY I+SFNRST NPSS * RS
Sbjct: 317 GNCPTSLSGNGITAASVISG*VSNRASSSAGAT**PLYLISSFNRSTTNMNPSSSI*QRS 496
Query: 184 PVFN 173
PV N
Sbjct: 497 PVLN 508
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 117 bits (250), Expect(4) = 2e-056
Identities = 43/69 (62%), Positives = 63/69 (91%)
Frame = +3 / -3
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 515
+PD++ GQ PMA++VRK GS+L+E+ +M+FVAKQVAPYK++R+VAFVS+IPK+P+GKILR
Sbjct: 7103680 FPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILR 7103501
Query: 516 RELVEXAVS 542
++L++ A S
Sbjct: 7103500 KDLIKIATS 7103474
Score = 101 bits (215), Expect(4) = 2e-056
Identities = 36/52 (69%), Positives = 47/52 (90%)
Frame = +3 / -3
Query: 114 MKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
+ GY ++EAT++T+DSEGWL+TGDLCY +EDG +++VDRLKELIKYKGYQV
Sbjct: 7104385 LAGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQV 7104230
Score = 95.5 bits (202), Expect(4) = 2e-051
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = +3 / -1
Query: 117 KGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
+GY + EAT T++ EGWLKTGDLCY +EDG L++VDRLKELIKYKGYQV
Sbjct: 7101066 EGYFKNQEATNETINLEGWLKTGDLCYIDEDGFLFVVDRLKELIKYKGYQV 7100914
Score = 94.5 bits (200), Expect(2) = 8e-023
Identities = 42/105 (40%), Positives = 64/105 (60%)
Frame = +3 / -3
Query: 84 GELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGY 263
GE+ ++G VM GY D E TAA + +GW +GD+ +EDG L + DR K++I G
Sbjct: 7549051 GEIVLKGGSVMLGYYKDPEGTAACMREDGWFYSGDVGVIHEDGYLEVKDRSKDVIICGGE 7548872
Query: 264 QVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSN 398
+ AE+E +L ++P + +AAV+ PD+ G+ P AF+ K SN
Sbjct: 7548871 NISSAEVETVLYTNPVVKEAAVVAKPDKMWGETPCAFVSLKYDSN 7548737
Score = 92.3 bits (195), Expect(5) = 9e-061
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = +3 / -2
Query: 120 GYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
GY + EATA+T+DSEGWLKTGDLCY + DG +++VDRLKELIK GYQV
Sbjct: 7095527 GYFKNKEATASTIDSEGWLKTGDLCYIDGDGFVFVVDRLKELIKCNGYQV 7095378
Score = 92.3 bits (195), Expect(2) = 1e-021
Identities = 41/105 (39%), Positives = 63/105 (60%)
Frame = +3 / -1
Query: 84 GELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGY 263
GE+ RG VM GY D + TAA + +GW +GD+ ++DG L I DR K++I G
Sbjct: 7545450 GEIVFRGSSVMLGYYKDPQGTAACMREDGWFYSGDIGVIHKDGYLEIKDRSKDVIICGGE 7545271
Query: 264 QVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSN 398
+ AE+E +L ++P + +AAV+ PD+ G+ P AF+ K +N
Sbjct: 7545270 NISSAEIETVLYTNPVVKEAAVVAKPDKMWGETPCAFVSLKCDNN 7545136
Score = 69.8 bits (146), Expect(5) = 1e-036
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +3 / -1
Query: 177 KTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
KTGDLCY +EDG L++VDRLKELIKYKGYQV
Sbjct: 7097832 KTGDLCYIDEDGFLFVVDRLKELIKYKGYQV 7097740
Score = 66.6 bits (139), Expect(4) = 2e-056
Identities = 23/40 (57%), Positives = 33/40 (82%)
Frame = +3 / -2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKG 122
+ GKL++ +E +IVDP TG++LGP Q GELW++GP +MKG
Sbjct: 7104584 TAGKLSASMEGRIVDPVTGQILGPKQTGELWLKGPSIMKG 7104465
Score = 63.4 bits (132), Expect(5) = 9e-061
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = +3 / -1
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKG 122
G LA ++E KIVDP TG VLG Q GELW+R P VMKG
Sbjct: 7095732 GLLAPNVEGKIVDPDTGRVLGVNQTGELWIRSPTVMKG 7095619
Score = 61.1 bits (127), Expect(5) = 1e-036
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +3 / -3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKG 122
+VG L+S +EA+IVDP TG V+G Q GELW++GP + KG
Sbjct: 7098376 AVGLLSSGIEARIVDPDTGRVMGVNQPGELWLKGPSISKG 7098257
Score = 60.6 bits (126), Expect(4) = 2e-051
Identities = 22/35 (62%), Positives = 32/35 (91%)
Frame = +3 / -2
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+PD++AGQ PMA++VRK SNL+E+QV+DF++KQV
Sbjct: 7100648 FPDKEAGQYPMAYVVRKHESNLSEKQVIDFISKQV 7100544
Score = 60.2 bits (125), Expect(5) = 1e-036
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +3 / -3
Query: 294 LNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+ H A+ +PD +AGQ PMA++ RKP SNL+E++V+DF++ QV
Sbjct: 7097551 IEKHVVCFFCALYRFPDREAGQYPMAYVARKPESNLSEKEVIDFISNQV 7097405
Score = 58.8 bits (122), Expect(5) = 9e-061
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +3 / -1
Query: 339 PDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
PD AGQ PMA+IVRK GSNL+E ++M FVAKQV
Sbjct: 7095099 PDMKAGQYPMAYIVRKVGSNLSESEIMGFVAKQV 7094998
Score = 58.8 bits (122), Expect(5) = 1e-036
Identities = 21/37 (56%), Positives = 33/37 (89%)
Frame = +3 / -3
Query: 432 KQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
+QVAPYKK+R+VAF+S+IPK+ +GK LR++L++ + S
Sbjct: 7097314 EQVAPYKKIRKVAFISSIPKTASGKTLRKDLIKLSTS 7097204
Score = 57.4 bits (119), Expect(5) = 9e-061
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +3 / -3
Query: 438 VAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
V+PYKK+R+V F+++IPK+P+GKILRREL + S
Sbjct: 7094905 VSPYKKIRKVTFLASIPKNPSGKILRRELTKLTTS 7094801
Score = 57.4 bits (119), Expect(4) = 2e-051
Identities = 20/37 (54%), Positives = 33/37 (89%)
Frame = +3 / -2
Query: 432 KQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
+QVAPYKK+R+V+F+++IPK+ +GK LR++L++ A S
Sbjct: 7100435 EQVAPYKKIRKVSFINSIPKTASGKTLRKDLIKLATS 7100325
Score = 48.3 bits (99), Expect(4) = 2e-051
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +3 / -1
Query: 264 QVPPAELEHILNSHPDIMDAAVIP 335
QVPPAELE +L +HPDI+DAAVIP
Sbjct: 7100835 QVPPAELEALLITHPDILDAAVIP 7100764
Score = 39.1 bits (79), Expect(5) = 9e-061
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3 / -3
Query: 267 VPPAELEHILNSHPDIMDAAVIP 335
V PAELE +L +HP+I DAAVIP
Sbjct: 7095277 VAPAELEALLLAHPEIADAAVIP 7095209
Score = 39.1 bits (79), Expect(4) = 2e-056
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3 / -3
Query: 267 VPPAELEHILNSHPDIMDAAVIP 335
V PAELE +L +HP+I DAAVIP
Sbjct: 7103824 VAPAELEALLLTHPEITDAAVIP 7103756
Score = 38.2 bits (77), Expect(5) = 1e-036
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3 / -2
Query: 108 VVMKGYVGDDEATAATVDSEGWLK 179
+ KGY G++EAT T++ EGWLK
Sbjct: 7097900 ICFKGYFGNEEATNETINLEGWLK 7097829
Score = 34.5 bits (69), Expect(2) = 8e-023
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3 / -3
Query: 399 LTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVSM 545
+TE+++ +F ++ Y R+V F +PK+ GKI + L + A S+
Sbjct: 7548724 VTEREIREFCKTRLPKYMVPRKVIFQEELPKTSTGKIQKFLLRQMAKSL 7548578
Score = 33.1 bits (66), Expect(2) = 1e-021
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3 / -1
Query: 399 LTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVSM 545
+TE+++ +F ++ Y R+V F +PK+ GKI + L + A ++
Sbjct: 7545117 VTEREIREFCKTKLPKYMVPRKVIFQEELPKTSTGKIQKFLLRQMAKTL 7544971
>emb|AX461232.1| Sequence 161 from Patent WO0198480
Length = 2004
Score = 95.5 bits (202), Expect(5) = 1e-060
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = +3 / +3
Query: 117 KGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
+GY + EAT T++ EGWLKTGDLCY +EDG L++VDRLKELIKYKGYQV
Sbjct: 1194 EGYFKNQEATNETINLEGWLKTGDLCYIDEDGFLFVVDRLKELIKYKGYQV 1346
Score = 60.6 bits (126), Expect(5) = 1e-060
Identities = 22/35 (62%), Positives = 32/35 (91%)
Frame = +3 / +1
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+PD++AGQ PMA++VRK SNL+E+QV+DF++KQV
Sbjct: 1612 FPDKEAGQYPMAYVVRKHESNLSEKQVIDFISKQV 1716
Score = 57.9 bits (120), Expect(5) = 1e-060
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYV 128
+ G L S +EA+IVDP+TG +G Q GELW++GP + KG +
Sbjct: 703 TAGTLTSDVEARIVDPNTGRFMGINQTGELWLKGPSISKGKI 828
Score = 57.4 bits (119), Expect(5) = 1e-060
Identities = 20/37 (54%), Positives = 33/37 (89%)
Frame = +3 / +1
Query: 432 KQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
+QVAPYKK+R+V+F+++IPK+ +GK LR++L++ A S
Sbjct: 1825 EQVAPYKKIRKVSFINSIPKTASGKTLRKDLIKLATS 1935
Score = 48.3 bits (99), Expect(5) = 1e-060
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +3 / +3
Query: 264 QVPPAELEHILNSHPDIMDAAVIP 335
QVPPAELE +L +HPDI+DAAVIP
Sbjct: 1425 QVPPAELEALLITHPDILDAAVIP 1496
>dbj|AB023035.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9H21
Length = 15319
Score = 99.6 bits (211), Expect(4) = 3e-059
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = +3 / -2
Query: 120 GYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
GYVG+++A+A TVD EGWLKTGDLCYF+ + LYIVDRLKELIKYK YQV
Sbjct: 15249 GYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQV 15100
Score = 73.9 bits (155), Expect(4) = 3e-059
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +3 / -1
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+PDEDAG++PMAFIVRKPGSNL E Q++DFVAKQV
Sbjct: 14887 FPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQV 14783
Score = 70.3 bits (147), Expect(4) = 3e-059
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +3 / -2
Query: 438 VAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVSMGTXKL*SLKFI 578
V PYKKVRRVAF++AIPK+PAGKILRREL + AV KL* + +
Sbjct: 14679 VTPYKKVRRVAFINAIPKNPAGKILRRELTKIAVDGNASKL*DNRLV 14539
Score = 51.9 bits (107), Expect(4) = 7e-022
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -2 / +3
Query: 439 TCLATKSMTCCSVRFDPGFLTIKAIGSCP 353
TCLATKSM C S+R PGFLT+KAIG P
Sbjct: 14784 TCLATKSMICASLRLLPGFLTMKAIGISP 14870
Score = 46.9 bits (96), Expect(4) = 7e-022
Identities = 24/42 (57%), Positives = 25/42 (59%)
Frame = -2 / +2
Query: 562 QSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GAT 437
QS TA SSRR+I PAG GIA KATR TFL G T
Sbjct: 14555 QSFDALPSTAILVSSRRRILPAGFFGIAFIKATRLTFLYGVT 14680
Score = 44.6 bits (91), Expect(4) = 3e-059
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3 / -3
Query: 267 VPPAELEHILNSHPDIMDAAVIP 335
VPP ELE IL+S+PD++DAAV+P
Sbjct: 15029 VPPVELEQILHSNPDVIDAAVVP 14961
Score = 38.2 bits (77), Expect(4) = 7e-022
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -2 / +2
Query: 268 T*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
T* LY I+SF+RST+ S K* RSPVFN
Sbjct: 15101 T**ALYLISSFSRSTIYRKSSESK*QRSPVFN 15196
Score = 23.5 bits (45), Expect(4) = 7e-022
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 301 EFRICSSSAGGT 266
E RICS+S GGT
Sbjct: 14995 E*RICSNSTGGT 15030
>emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, short arm
Length = 3052119
Score = 88.1 bits (186), Expect(5) = 7e-059
Identities = 32/52 (61%), Positives = 42/52 (80%)
Frame = +3 / +2
Query: 114 MKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
+ GY+ + +AT T+D + W+ TGDL YFNEDG LY+VDR+KELIKYKG+QV
Sbjct: 2664680 LSGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQV 2664835
Score = 61.6 bits (128), Expect(5) = 7e-059
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +3 / +2
Query: 435 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVE 530
QVAPYK++RRV+F+S +PKS AGKILRRELV+
Sbjct: 2665250 QVAPYKRLRRVSFISLVPKSAAGKILRRELVQ 2665345
Score = 59.7 bits (124), Expect(5) = 7e-059
Identities = 20/35 (57%), Positives = 30/35 (85%)
Frame = +3 / +1
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+PDE+AG++P+AF+VR P S++TEQ + F+AKQV
Sbjct: 2665069 FPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQV 2665173
Score = 53.3 bits (110), Expect(5) = 7e-059
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKG 122
S G LA +EA+IV TG+ P Q+GE+WVRGP +MKG
Sbjct: 2664496 SAGMLAPGVEAQIVSVETGKSQPPNQQGEIWVRGPNMMKG 2664615
Score = 41.8 bits (85), Expect(5) = 7e-059
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3 / +1
Query: 267 VPPAELEHILNSHPDIMDAAVIP 335
V PAELE +L SHPDI+DA VIP
Sbjct: 2664928 VAPAELEGLLVSHPDILDAVVIP 2664996
>gb|CB074237.1|CB074237 EST00751 Virulent Peronospora parasitica Infected Arabidopsis
Forward-Subtracted Library Arabidopsis thaliana cDNA
clone VPP-AA2 similar to 4-COUMARATE-COA LIGASE, mRNA
sequence
Length = 475
Score = 229 bits (495), Expect = 7e-059
Identities = 88/135 (65%), Positives = 115/135 (85%)
Frame = +3 / -3
Query: 126 VGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSH 305
+ + +AT T+D + W+ TGDL YFNEDG LY+VDR+KELIKYKG+QV PAELE +L SH
Sbjct: 473 LNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQVAPAELEGLLVSH 294
Query: 306 PDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAI 485
PDI+DA VIP+PDE+AG++P+AF+VR P S++TEQ + F+AKQVAPYK++RRV+F+S +
Sbjct: 293 PDILDAVVIPFPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQVAPYKRLRRVSFISLV 114
Query: 486 PKSPAGKILRRELVE 530
PKS AGKILRRELV+
Sbjct: 113 PKSAAGKILRRELVQ 69
>emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 15
Length = 199987
Score = 88.1 bits (186), Expect(5) = 7e-059
Identities = 32/52 (61%), Positives = 42/52 (80%)
Frame = +3 / +3
Query: 114 MKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
+ GY+ + +AT T+D + W+ TGDL YFNEDG LY+VDR+KELIKYKG+QV
Sbjct: 4314 LSGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQV 4469
Score = 61.6 bits (128), Expect(5) = 7e-059
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +3 / +3
Query: 435 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVE 530
QVAPYK++RRV+F+S +PKS AGKILRRELV+
Sbjct: 4884 QVAPYKRLRRVSFISLVPKSAAGKILRRELVQ 4979
Score = 59.7 bits (124), Expect(5) = 7e-059
Identities = 20/35 (57%), Positives = 30/35 (85%)
Frame = +3 / +2
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+PDE+AG++P+AF+VR P S++TEQ + F+AKQV
Sbjct: 4703 FPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQV 4807
Score = 53.3 bits (110), Expect(5) = 7e-059
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKG 122
S G LA +EA+IV TG+ P Q+GE+WVRGP +MKG
Sbjct: 4130 SAGMLAPGVEAQIVSVETGKSQPPNQQGEIWVRGPNMMKG 4249
Score = 41.8 bits (85), Expect(5) = 7e-059
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3 / +2
Query: 267 VPPAELEHILNSHPDIMDAAVIP 335
V PAELE +L SHPDI+DA VIP
Sbjct: 4562 VAPAELEGLLVSHPDILDAVVIP 4630
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14
Length = 198563
Score = 88.1 bits (186), Expect(5) = 7e-059
Identities = 32/52 (61%), Positives = 42/52 (80%)
Frame = +3 / +3
Query: 114 MKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
+ GY+ + +AT T+D + W+ TGDL YFNEDG LY+VDR+KELIKYKG+QV
Sbjct: 197877 LSGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQV 198032
Score = 61.6 bits (128), Expect(5) = 7e-059
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +3 / +3
Query: 435 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVE 530
QVAPYK++RRV+F+S +PKS AGKILRRELV+
Sbjct: 198447 QVAPYKRLRRVSFISLVPKSAAGKILRRELVQ 198542
Score = 59.7 bits (124), Expect(5) = 7e-059
Identities = 20/35 (57%), Positives = 30/35 (85%)
Frame = +3 / +2
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+PDE+AG++P+AF+VR P S++TEQ + F+AKQV
Sbjct: 198266 FPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQV 198370
Score = 53.3 bits (110), Expect(5) = 7e-059
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKG 122
S G LA +EA+IV TG+ P Q+GE+WVRGP +MKG
Sbjct: 197693 SAGMLAPGVEAQIVSVETGKSQPPNQQGEIWVRGPNMMKG 197812
Score = 41.8 bits (85), Expect(5) = 7e-059
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3 / +2
Query: 267 VPPAELEHILNSHPDIMDAAVIP 335
V PAELE +L SHPDI+DA VIP
Sbjct: 198125 VAPAELEGLLVSHPDILDAVVIP 198193
>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV,
complete sequence
Length = 183147
Score = 88.1 bits (186), Expect(5) = 7e-059
Identities = 32/52 (61%), Positives = 42/52 (80%)
Frame = +3 / -1
Query: 114 MKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
+ GY+ + +AT T+D + W+ TGDL YFNEDG LY+VDR+KELIKYKG+QV
Sbjct: 55233 LSGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQV 55078
Score = 61.6 bits (128), Expect(5) = 7e-059
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +3 / -1
Query: 435 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVE 530
QVAPYK++RRV+F+S +PKS AGKILRRELV+
Sbjct: 54663 QVAPYKRLRRVSFISLVPKSAAGKILRRELVQ 54568
Score = 59.7 bits (124), Expect(5) = 7e-059
Identities = 20/35 (57%), Positives = 30/35 (85%)
Frame = +3 / -3
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+PDE+AG++P+AF+VR P S++TEQ + F+AKQV
Sbjct: 54844 FPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQV 54740
Score = 53.3 bits (110), Expect(5) = 7e-059
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +3 / -3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKG 122
S G LA +EA+IV TG+ P Q+GE+WVRGP +MKG
Sbjct: 55417 SAGMLAPGVEAQIVSVETGKSQPPNQQGEIWVRGPNMMKG 55298
Score = 41.8 bits (85), Expect(5) = 7e-059
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3 / -3
Query: 267 VPPAELEHILNSHPDIMDAAVIP 335
V PAELE +L SHPDI+DA VIP
Sbjct: 54985 VAPAELEGLLVSHPDILDAVVIP 54917
>gb|AC012477.1|AC012477 Genomic Sequence For Arabidopsis thaliana Clone C6L9, Chromosome IV,
complete sequence
Length = 145453
Score = 88.1 bits (186), Expect(5) = 7e-059
Identities = 32/52 (61%), Positives = 42/52 (80%)
Frame = +3 / -2
Query: 114 MKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
+ GY+ + +AT T+D + W+ TGDL YFNEDG LY+VDR+KELIKYKG+QV
Sbjct: 110982 LSGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQV 110827
Score = 61.6 bits (128), Expect(5) = 7e-059
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +3 / -2
Query: 435 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVE 530
QVAPYK++RRV+F+S +PKS AGKILRRELV+
Sbjct: 110412 QVAPYKRLRRVSFISLVPKSAAGKILRRELVQ 110317
Score = 59.7 bits (124), Expect(5) = 7e-059
Identities = 20/35 (57%), Positives = 30/35 (85%)
Frame = +3 / -1
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+PDE+AG++P+AF+VR P S++TEQ + F+AKQV
Sbjct: 110593 FPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQV 110489
Score = 53.3 bits (110), Expect(5) = 7e-059
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +3 / -1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKG 122
S G LA +EA+IV TG+ P Q+GE+WVRGP +MKG
Sbjct: 111166 SAGMLAPGVEAQIVSVETGKSQPPNQQGEIWVRGPNMMKG 111047
Score = 41.8 bits (85), Expect(5) = 7e-059
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3 / -1
Query: 267 VPPAELEHILNSHPDIMDAAVIP 335
V PAELE +L SHPDI+DA VIP
Sbjct: 110734 VAPAELEGLLVSHPDILDAVVIP 110666
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,395,717,170
Number of Sequences: 1013581
Number of extensions: 17002498
Number of successful extensions: 114838
Number of sequences better than 1.0e-020: 197
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 48751511292
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)