TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131612.2.1
(620 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV534683.1|AV534683 AV534683 Arabidopsis thaliana flower... 208 1e-052
ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTH... 208 1e-052
gb|AV535768.1|AV535768 AV535768 Arabidopsis thaliana flower... 204 1e-051
dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for put... 204 1e-051
ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTH... 204 1e-051
gb|AV546514.1|AV546514 AV546514 Arabidopsis thaliana roots ... 204 3e-051
gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthas... 204 3e-051
emb|AX412747.1| Sequence 511 from Patent WO0222675 204 3e-051
emb|AX508002.1| Sequence 2697 from Patent WO0216655 204 3e-051
ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHA... 204 3e-051
emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome... 170 2e-048
gb|AI996136.1|AI996136 701550178 A. thaliana, Columbia Col-... 193 4e-048
emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cD... 191 1e-047
gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D... 166 4e-047
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 165 1e-046
gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 ... 165 1e-046
gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis tha... 165 1e-046
emb|AX441264.1| Sequence 18 from Patent EP1209228 165 1e-046
dbj|BD181338.1| A stress-responsive promoter 165 1e-046
gb|AQ959103.1|AQ959103 LEREH30TRB LERE Arabidopsis thaliana... 163 2e-046
emb|AX651854.1| Sequence 720 from Patent WO03000898 164 6e-046
gb|CW796846.1|CW796846 WiscDsLox468C6 Arabidopsis thaliana ... 170 2e-045
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 170 3e-041
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 170 3e-041
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 166 4e-040
ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTH... 165 1e-039
gb|AQ959102.1|AQ959102 LEREH30TR LERE Arabidopsis thaliana ... 163 1e-039
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 165 1e-039
gb|AU228526.1|AU228526 AU228526 RAFL16 Arabidopsis thaliana... 133 6e-039
gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J... 160 4e-038
gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F... 160 4e-038
tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase ... 160 4e-038
gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, ... 160 4e-038
ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synth... 160 4e-038
gb|AQ957761.1|AQ957761 LERAR55TF LERA Arabidopsis thaliana ... 160 5e-038
ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTH... 155 1e-036
gb|AQ959101.1|AQ959101 LEREH30TFB LERE Arabidopsis thaliana... 128 8e-036
gb|AI995793.1|AI995793 701548593 A. thaliana, Columbia Col-... 151 1e-035
gb|AV523506.1|AV523506 AV523506 Arabidopsis thaliana aboveg... 151 1e-035
gb|AY099734.1| Arabidopsis thaliana putative glucan synthas... 151 1e-035
gb|BT000346.1| Arabidopsis thaliana putative glucan synthas... 151 1e-035
dbj|AK221151.1| Arabidopsis thaliana mRNA for putative gluc... 151 1e-035
ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTH... 151 1e-035
emb|BX825904.1|CNS0A6G3 Arabidopsis thaliana Full-length cD... 149 7e-035
gb|AY085106.1| Arabidopsis thaliana clone 12977 mRNA, compl... 148 1e-034
ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTH... 142 1e-032
dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosom... 130 1e-032
gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis tha... 126 1e-032
gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome II... 116 5e-031
gb|CL499023.1|CL499023 SAIL_662_E12.v2 SAIL Collection Arab... 135 1e-030
ref|NM_112317.1| Arabidopsis thaliana ATGSL04 (GLUCAN SYNTH... 133 4e-030
gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8... 131 2e-029
ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTH... 131 2e-029
emb|AL759226.1| Arabidopsis thaliana T-DNA flanking sequenc... 130 3e-029
gb|AV522143.1|AV522143 AV522143 Arabidopsis thaliana aboveg... 126 6e-028
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 121 2e-026
emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome... 121 2e-026
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 121 2e-026
gb|BH753021.1|BH753021 SALK_019658.55.75.x Arabidopsis thal... 116 5e-025
gb|AV548414.1|AV548414 AV548414 Arabidopsis thaliana roots ... 116 5e-025
gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 116 9e-025
emb|AX059538.1| Sequence 271 from Patent WO0055325 116 9e-025
gb|AY050990.1| Arabidopsis thaliana putative glucan synthas... 116 9e-025
gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis tha... 116 9e-025
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 116 9e-025
emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosom... 116 9e-025
ref|NM_116736.1| Arabidopsis thaliana ATGSL1 (GLUCAN SYNTHA... 116 9e-025
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 116 9e-025
gb|B27162.1|B27162 T2A17TR TAMU Arabidopsis thaliana genomi... 97 8e-024
dbj|AB023038.1| Arabidopsis thaliana genomic DNA, chromosom... 108 2e-022
gb|AV546456.1|AV546456 AV546456 Arabidopsis thaliana roots ... 107 3e-022
gb|BX836766.1|BX836766 BX836766 Arabidopsis thaliana Flower... 67 9e-022
emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome... 82 2e-021
gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromoso... 82 2e-021
gb|AF071527.1| Arabidopsis thaliana BAC F9H3, from chromoso... 82 2e-021
ref|NM_116593.3| Arabidopsis thaliana ATGSL05 (GLUCAN SYNTH... 82 2e-021
emb|AX506240.1| Sequence 935 from Patent WO0216655 82 2e-021
gb|AV543953.1|AV543953 AV543953 Arabidopsis thaliana roots ... 82 2e-021
emb|BX824879.1|CNS0A7RK Arabidopsis thaliana Full-length cD... 102 9e-021
>gb|AV534683.1|AV534683 AV534683 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB084c02F 3', mRNA sequence
Length = 455
Score = 208 bits (449), Expect = 1e-052
Identities = 82/100 (82%), Positives = 93/100 (93%)
Frame = +3 / -3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
I VCILAFMPTGWG+LLIAQA +PV+ + G WGS++ LARGYEI+MGLLLFTP+AFLAWF
Sbjct: 450 IIVCILAFMPTGWGMLLIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWF 271
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PFVSEFQTRMLFNQAFSRGLQISRILGGH+KDR +R+KE*
Sbjct: 270 PFVSEFQTRMLFNQAFSRGLQISRILGGHRKDRSSRNKE* 151
Score = 119 bits (255), Expect = 7e-026
Identities = 57/106 (53%), Positives = 66/106 (62%)
Frame = -2 / +2
Query: 319 FNQQPYYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXX 140
+N++ +SL R RS PPRIREI RPLLKA L SI VWNSDTNGN A+ A GVN
Sbjct: 134 YNEEMNHSLFREERSLR*PPRIREI*RPLLKA*LKSIRVWNSDTNGNHAKNATGVNSNSP 313
Query: 139 XXXXXXXXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQTKM 2
L DP +P * TGL A AI+S P PVG+KAR+ T M
Sbjct: 314 ITISYPRARVLTDPQNPAL*TTGLHACAIKSIPQPVGIKARIHTIM 451
>ref|NM_121303.3| Arabidopsis thaliana ATGSL12 (GLUCAN SYNTHASE-LIKE 12);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT5G13000 (ATGSL12) mRNA, complete cds
Length = 6194
Score = 208 bits (449), Expect = 1e-052
Identities = 82/100 (82%), Positives = 93/100 (93%)
Frame = +3 / +3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
I VCILAFMPTGWG+LLIAQA +PV+ + G WGS++ LARGYEI+MGLLLFTP+AFLAWF
Sbjct: 5745 IIVCILAFMPTGWGMLLIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWF 5924
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PFVSEFQTRMLFNQAFSRGLQISRILGGH+KDR +R+KE*
Sbjct: 5925 PFVSEFQTRMLFNQAFSRGLQISRILGGHRKDRSSRNKE* 6044
Score = 119 bits (255), Expect = 7e-026
Identities = 57/106 (53%), Positives = 66/106 (62%)
Frame = -2 / -2
Query: 319 FNQQPYYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXX 140
+N++ +SL R RS PPRIREI RPLLKA L SI VWNSDTNGN A+ A GVN
Sbjct: 6061 YNEEMNHSLFREERSLR*PPRIREI*RPLLKA*LKSIRVWNSDTNGNHAKNATGVNSNSP 5882
Query: 139 XXXXXXXXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQTKM 2
L DP +P * TGL A AI+S P PVG+KAR+ T M
Sbjct: 5881 ITISYPRARVLTDPQNPAL*TTGLHACAIKSIPQPVGIKARIHTIM 5744
>gb|AV535768.1|AV535768 AV535768 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB101h07F 3', mRNA sequence
Length = 533
Score = 204 bits (441), Expect = 1e-051
Identities = 80/100 (80%), Positives = 94/100 (94%)
Frame = +3 / -3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF+C+LAFMPTGWG+LLIAQA +P+IQ++G W S++ LARGYEILMGLLLFTP+AFLAWF
Sbjct: 420 IFLCMLAFMPTGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWF 241
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +++KE*
Sbjct: 240 PFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 121
Score = 117 bits (250), Expect = 3e-025
Identities = 57/101 (56%), Positives = 63/101 (62%)
Frame = -2 / +2
Query: 304 YYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXX 125
++SL RSFL PPRIREIC PLL AWL SILV NSDTNGNQAR A GVN
Sbjct: 119 FHSLFLEERSFL*PPRIREICNPLLNAWLKSILV*NSDTNGNQARNATGVNKSKPMRIS* 298
Query: 124 XXXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQTKM 2
L D +P *I GL A A+ + P PVGMKA +Q KM
Sbjct: 299 PRASVLTDDQNPSR*IRGLHACAMSNIPQPVGMKASIQRKM 421
>dbj|AK117353.1| Arabidopsis thaliana At2g31960 mRNA for putative glucan synthase,
complete cds, clone: RAFL16-92-B13
Length = 2390
Score = 204 bits (441), Expect = 1e-051
Identities = 80/100 (80%), Positives = 94/100 (94%)
Frame = +3 / +3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF+C+LAFMPTGWG+LLIAQA +P+IQ++G W S++ LARGYEILMGLLLFTP+AFLAWF
Sbjct: 1971 IFLCMLAFMPTGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWF 2150
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +++KE*
Sbjct: 2151 PFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 2270
Score = 117 bits (250), Expect = 3e-025
Identities = 57/101 (56%), Positives = 63/101 (62%)
Frame = -2 / -2
Query: 304 YYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXX 125
++SL RSFL PPRIREIC PLL AWL SILV NSDTNGNQAR A GVN
Sbjct: 2272 FHSLFLEERSFL*PPRIREICNPLLNAWLKSILV*NSDTNGNQARNATGVNKSKPMRIS* 2093
Query: 124 XXXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQTKM 2
L D +P *I GL A A+ + P PVGMKA +Q KM
Sbjct: 2092 PRASVLTDDQNPSR*IRGLHACAMSNIPQPVGMKASIQRKM 1970
>ref|NM_179847.1| Arabidopsis thaliana ATGSL03 (GLUCAN SYNTHASE-LIKE 3);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT2G31960 (ATGSL03) mRNA, complete cds
Length = 5880
Score = 204 bits (441), Expect = 1e-051
Identities = 80/100 (80%), Positives = 94/100 (94%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF+C+LAFMPTGWG+LLIAQA +P+IQ++G W S++ LARGYEILMGLLLFTP+AFLAWF
Sbjct: 5581 IFLCMLAFMPTGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWF 5760
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +++KE*
Sbjct: 5761 PFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5880
Score = 116 bits (247), Expect = 9e-025
Identities = 57/100 (57%), Positives = 62/100 (62%)
Frame = -2 / -2
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
+SL RSFL PPRIREIC PLL AWL SILV NSDTNGNQAR A GVN
Sbjct: 5879 HSLFLEERSFL*PPRIREICNPLLNAWLKSILV*NSDTNGNQARNATGVNKSKPMRIS*P 5700
Query: 121 XXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQTKM 2
L D +P *I GL A A+ + P PVGMKA +Q KM
Sbjct: 5699 RASVLTDDQNPSR*IRGLHACAMSNIPQPVGMKASIQRKM 5580
>gb|AV546514.1|AV546514 AV546514 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL15c03F 3', mRNA sequence
Length = 544
Score = 204 bits (439), Expect = 3e-051
Identities = 78/100 (78%), Positives = 95/100 (95%)
Frame = +3 / -1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F+C+LAFMPTGWG+LLIAQA +P+IQ++G+W S++ LARGYEI+MGLLLFTP+AFLAWF
Sbjct: 427 LFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWF 248
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +++KE*
Sbjct: 247 PFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 128
Score = 129 bits (276), Expect(2) = 6e-030
Identities = 60/97 (61%), Positives = 63/97 (64%)
Frame = -2 / +3
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
+SL RSFL PPRIREICRPLLKAWL SILVWNSDT GNQA+ A GVN
Sbjct: 129 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 308
Query: 121 XXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQ 11
L D H P I GL A A+RS PHPVGMKA MQ
Sbjct: 309 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQ 419
Score = 23.5 bits (45), Expect(2) = 6e-030
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2 / +2
Query: 409 VRHTHTYIRTLIFSEP 362
+RH H Y+ L+F P
Sbjct: 104 IRHLHVYMSLLVF*RP 151
>gb|AF237733.1|AF237733 Arabidopsis thaliana callose synthase 1 catalytic subunit (CalS1)
mRNA, complete cds
Length = 6007
Score = 204 bits (439), Expect = 3e-051
Identities = 78/100 (78%), Positives = 95/100 (95%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F+C+LAFMPTGWG+LLIAQA +P+IQ++G+W S++ LARGYEI+MGLLLFTP+AFLAWF
Sbjct: 5563 LFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWF 5742
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +++KE*
Sbjct: 5743 PFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5862
Score = 129 bits (276), Expect = 9e-029
Identities = 60/97 (61%), Positives = 63/97 (64%)
Frame = -2 / -3
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
+SL RSFL PPRIREICRPLLKAWL SILVWNSDT GNQA+ A GVN
Sbjct: 5861 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 5682
Query: 121 XXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQ 11
L D H P I GL A A+RS PHPVGMKA MQ
Sbjct: 5681 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQ 5571
>emb|AX412747.1| Sequence 511 from Patent WO0222675
Length = 5577
Score = 204 bits (439), Expect = 3e-051
Identities = 78/100 (78%), Positives = 95/100 (95%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F+C+LAFMPTGWG+LLIAQA +P+IQ++G+W S++ LARGYEI+MGLLLFTP+AFLAWF
Sbjct: 5278 LFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWF 5457
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +++KE*
Sbjct: 5458 PFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5577
Score = 129 bits (276), Expect = 9e-029
Identities = 60/97 (61%), Positives = 63/97 (64%)
Frame = -2 / -2
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
+SL RSFL PPRIREICRPLLKAWL SILVWNSDT GNQA+ A GVN
Sbjct: 5576 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 5397
Query: 121 XXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQ 11
L D H P I GL A A+RS PHPVGMKA MQ
Sbjct: 5396 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQ 5286
>emb|AX508002.1| Sequence 2697 from Patent WO0216655
Length = 5577
Score = 204 bits (439), Expect = 3e-051
Identities = 78/100 (78%), Positives = 95/100 (95%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F+C+LAFMPTGWG+LLIAQA +P+IQ++G+W S++ LARGYEI+MGLLLFTP+AFLAWF
Sbjct: 5278 LFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWF 5457
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +++KE*
Sbjct: 5458 PFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5577
Score = 129 bits (276), Expect = 9e-029
Identities = 60/97 (61%), Positives = 63/97 (64%)
Frame = -2 / -2
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
+SL RSFL PPRIREICRPLLKAWL SILVWNSDT GNQA+ A GVN
Sbjct: 5576 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 5397
Query: 121 XXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQ 11
L D H P I GL A A+RS PHPVGMKA MQ
Sbjct: 5396 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQ 5286
>ref|NM_100436.2| Arabidopsis thaliana CALS1 (CALLOSE SYNTHASE 1); transferase,
transferring glycosyl groups AT1G05570 (CALS1) mRNA,
complete cds
Length = 6022
Score = 204 bits (439), Expect = 3e-051
Identities = 78/100 (78%), Positives = 95/100 (95%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F+C+LAFMPTGWG+LLIAQA +P+IQ++G+W S++ LARGYEI+MGLLLFTP+AFLAWF
Sbjct: 5563 LFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWF 5742
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +++KE*
Sbjct: 5743 PFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 5862
Score = 129 bits (276), Expect(2) = 6e-030
Identities = 60/97 (61%), Positives = 63/97 (64%)
Frame = -2 / -3
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
+SL RSFL PPRIREICRPLLKAWL SILVWNSDT GNQA+ A GVN
Sbjct: 5861 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 5682
Query: 121 XXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQ 11
L D H P I GL A A+RS PHPVGMKA MQ
Sbjct: 5681 RASVLTDDHIPSCWIRGLHACAMRSIPHPVGMKASMQ 5571
Score = 23.5 bits (45), Expect(2) = 6e-030
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2 / -2
Query: 409 VRHTHTYIRTLIFSEP 362
+RH H Y+ L+F P
Sbjct: 5886 IRHLHVYMSLLVF*RP 5839
>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project)
Length = 90020
Score = 170 bits (366), Expect(2) = 2e-048
Identities = 68/85 (80%), Positives = 78/85 (91%)
Frame = +3 / -1
Query: 48 LLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 227
L IAQA +PV+ + G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQA
Sbjct: 62516 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 62337
Query: 228 FSRGLQISRILGGHKKDRGTRSKE* 302
FSRGLQISRILGGH+KDR +R+KE*
Sbjct: 62336 FSRGLQISRILGGHRKDRSSRNKE* 62262
Score = 96.8 bits (205), Expect(2) = 5e-021
Identities = 47/89 (52%), Positives = 53/89 (59%)
Frame = -2 / +1
Query: 319 FNQQPYYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXX 140
+N++ +SL R RS PPRIREI RPLLKA L SI VWNSDTNGN A+ A GVN
Sbjct: 62245 YNEEMNHSLFREERSLR*PPRIREI*RPLLKA*LKSIRVWNSDTNGNHAKNATGVNSNSP 62424
Query: 139 XXXXXXXXXALIDPHSPIF*ITGLIAWAI 53
L DP +P * TGL A AI
Sbjct: 62425 ITISYPRARVLTDPQNPAL*TTGLHACAI 62511
Score = 44.1 bits (90), Expect(2) = 2e-048
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +3 / -1
Query: 3 IFVCILAFMPTGWGLLLIAQ 62
I VCILAFMPTGWG+LL+++
Sbjct: 62660 IIVCILAFMPTGWGMLLVSK 62601
Score = 25.8 bits (50), Expect(2) = 5e-021
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / +1
Query: 52 RSKPHPVGMKARMQTKM 2
+S P PVG+KAR+ T M
Sbjct: 62611 KSIPQPVGIKARIHTIM 62661
>gb|AI996136.1|AI996136 701550178 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701550178, mRNA sequence
Length = 626
Score = 193 bits (416), Expect = 4e-048
Identities = 75/100 (75%), Positives = 93/100 (93%)
Frame = +3 / -3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F+C++AFMPTG +LLIAQA +P+IQ++G+W S++ LARGYEI+MGLLLFTP+AFLAWF
Sbjct: 474 LFICMVAFMPTGXXMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWF 295
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PFVSEFQTRMLFNQAFSRGLQISRILGG +KDR +++KE*
Sbjct: 294 PFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNKE* 175
Score = 126 bits (269), Expect(2) = 6e-029
Identities = 59/97 (60%), Positives = 62/97 (63%)
Frame = -2 / +2
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
+SL RSFL PPRIREICRPLLKAWL SILVWNSDT GNQA+ A GVN
Sbjct: 176 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 355
Query: 121 XXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQ 11
L D H P I GL A A+RS HPVGMKA MQ
Sbjct: 356 RASVLTDDHIPSCWIRGLHACAMRSXXHPVGMKATMQ 466
Score = 23.5 bits (45), Expect(2) = 6e-029
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2 / +1
Query: 409 VRHTHTYIRTLIFSEP 362
+RH H Y+ L+F P
Sbjct: 151 IRHLHVYMSLLVF*RP 198
>emb|BX819158.1|CNS0A8YL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB52ZD04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1385
Score = 191 bits (412), Expect = 1e-047
Identities = 76/100 (76%), Positives = 89/100 (89%)
Frame = +3 / +3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF+C LAFMPTGWG+ LI QA +P+IQ++G W S++ LARGYEILMGLLLFTP+A LAWF
Sbjct: 1017 IFLCRLAFMPTGWGM*LIEQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVASLAWF 1196
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PFVSEFQTRMLFNQAFSRGLQ SRILGG +KDR +++KE*
Sbjct: 1197 PFVSEFQTRMLFNQAFSRGLQFSRILGGQRKDRSSKNKE* 1316
Score = 111 bits (237), Expect = 2e-023
Identities = 55/101 (54%), Positives = 61/101 (60%)
Frame = -2 / -2
Query: 304 YYSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXX 125
++SL RSFL PPRIRE C PLL AWL SILV NSDTNGNQAR A GVN
Sbjct: 1318 FHSLFLEERSFL*PPRIRENCNPLLNAWLKSILV*NSDTNGNQARDATGVNKSKPMRIS* 1139
Query: 124 XXXXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQTKM 2
L D +P *I GL A ++ P PVGMKA +Q KM
Sbjct: 1138 PRASVLTDDQNPSR*IRGLHACSMSYIPQPVGMKASLQRKM 1016
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete
sequence
Length = 103194
Score = 166 bits (358), Expect(2) = 4e-047
Identities = 67/86 (77%), Positives = 78/86 (90%)
Frame = +3 / -1
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
L IAQA +P+IQ++G W S++ LARGYEILMGLLLFTP+AFLAWFPFVSEFQTRMLFNQ
Sbjct: 89601 LFKIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWFPFVSEFQTRMLFNQ 89422
Query: 225 AFSRGLQISRILGGHKKDRGTRSKE* 302
AFSRGLQISRILGG +KDR +++KE*
Sbjct: 89421 AFSRGLQISRILGGQRKDRSSKNKE* 89344
Score = 43.7 bits (89), Expect(2) = 4e-047
Identities = 14/19 (73%), Positives = 19/19 (100%)
Frame = +3 / -2
Query: 3 IFVCILAFMPTGWGLLLIA 59
IF+C+LAFMPTGWG+LL++
Sbjct: 89762 IFLCMLAFMPTGWGMLLVS 89706
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 165 bits (354), Expect(2) = 1e-046
Identities = 65/83 (78%), Positives = 78/83 (93%)
Frame = +3 / -2
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQA +P+IQ++G+W S++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 1648004 IAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 1647825
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGLQISRILGG +KDR +++KE*
Sbjct: 1647824 RGLQISRILGGQRKDRSSKNKE* 1647756
Score = 126 bits (270), Expect(2) = 1e-032
Identities = 51/76 (67%), Positives = 61/76 (80%)
Frame = +3 / +1
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
+L I QA+R V + +G W S+K L R YE +MGL++FTPIA L+WFPFVSEFQTR+LFNQ
Sbjct: 1988638 VLKIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFNQ 1988817
Query: 225 AFSRGLQISRILGGHK 272
AFSRGLQIS IL G K
Sbjct: 1988818 AFSRGLQISMILAGKK 1988865
Score = 102 bits (218), Expect(2) = 3e-024
Identities = 49/83 (59%), Positives = 51/83 (61%)
Frame = -2 / +1
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
+SL RSFL PPRIREICRPLLKAWL SILVWNSDT GNQA+ A GVN
Sbjct: 1647757 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 1647936
Query: 121 XXXALIDPHSPIF*ITGLIAWAI 53
L D H P I GL A AI
Sbjct: 1647937 RASVLTDDHIPSCWIRGLHACAI 1648005
Score = 43.7 bits (89), Expect(2) = 1e-046
Identities = 13/19 (68%), Positives = 19/19 (100%)
Frame = +3 / -3
Query: 3 IFVCILAFMPTGWGLLLIA 59
+F+C+LAFMPTGWG+LL++
Sbjct: 1648153 LFICMLAFMPTGWGMLLVS 1648097
Score = 35.0 bits (70), Expect(2) = 1e-032
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIA 59
+F ILAF+PTGW +LL++
Sbjct: 1988506 LFASILAFLPTGWAILLVS 1988562
Score = 30.9 bits (61), Expect(2) = 3e-024
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 52 RSKPHPVGMKARMQ 11
RS PHPVGMKA MQ
Sbjct: 1648104 RSIPHPVGMKASMQ 1648145
>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete
sequence
Length = 103223
Score = 165 bits (354), Expect(2) = 1e-046
Identities = 65/83 (78%), Positives = 78/83 (93%)
Frame = +3 / -3
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQA +P+IQ++G+W S++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 29652 IAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 29473
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGLQISRILGG +KDR +++KE*
Sbjct: 29472 RGLQISRILGGQRKDRSSKNKE* 29404
Score = 102 bits (218), Expect(3) = 5e-026
Identities = 49/83 (59%), Positives = 51/83 (61%)
Frame = -2 / +2
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
+SL RSFL PPRIREICRPLLKAWL SILVWNSDT GNQA+ A GVN
Sbjct: 29405 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 29584
Query: 121 XXXALIDPHSPIF*ITGLIAWAI 53
L D H P I GL A AI
Sbjct: 29585 RASVLTDDHIPSCWIRGLHACAI 29653
Score = 43.7 bits (89), Expect(2) = 1e-046
Identities = 13/19 (68%), Positives = 19/19 (100%)
Frame = +3 / -1
Query: 3 IFVCILAFMPTGWGLLLIA 59
+F+C+LAFMPTGWG+LL++
Sbjct: 29801 LFICMLAFMPTGWGMLLVS 29745
Score = 30.9 bits (61), Expect(3) = 5e-026
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / +1
Query: 52 RSKPHPVGMKARMQ 11
RS PHPVGMKA MQ
Sbjct: 29752 RSIPHPVGMKASMQ 29793
Score = 23.5 bits (45), Expect(3) = 5e-026
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2 / +1
Query: 409 VRHTHTYIRTLIFSEP 362
+RH H Y+ L+F P
Sbjct: 29380 IRHLHVYMSLLVF*RP 29427
>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I,
complete sequence
Length = 84203
Score = 165 bits (354), Expect(2) = 1e-046
Identities = 65/83 (78%), Positives = 78/83 (93%)
Frame = +3 / -1
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQA +P+IQ++G+W S++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 80201 IAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 80022
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGLQISRILGG +KDR +++KE*
Sbjct: 80021 RGLQISRILGGQRKDRSSKNKE* 79953
Score = 102 bits (218), Expect(3) = 5e-026
Identities = 49/83 (59%), Positives = 51/83 (61%)
Frame = -2 / +1
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
+SL RSFL PPRIREICRPLLKAWL SILVWNSDT GNQA+ A GVN
Sbjct: 79954 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 80133
Query: 121 XXXALIDPHSPIF*ITGLIAWAI 53
L D H P I GL A AI
Sbjct: 80134 RASVLTDDHIPSCWIRGLHACAI 80202
Score = 43.7 bits (89), Expect(2) = 1e-046
Identities = 13/19 (68%), Positives = 19/19 (100%)
Frame = +3 / -2
Query: 3 IFVCILAFMPTGWGLLLIA 59
+F+C+LAFMPTGWG+LL++
Sbjct: 80350 LFICMLAFMPTGWGMLLVS 80294
Score = 30.9 bits (61), Expect(3) = 5e-026
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 52 RSKPHPVGMKARMQ 11
RS PHPVGMKA MQ
Sbjct: 80301 RSIPHPVGMKASMQ 80342
Score = 23.5 bits (45), Expect(3) = 5e-026
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2 / +3
Query: 409 VRHTHTYIRTLIFSEP 362
+RH H Y+ L+F P
Sbjct: 79929 IRHLHVYMSLLVF*RP 79976
>emb|AX441264.1| Sequence 18 from Patent EP1209228
Length = 2000
Score = 165 bits (354), Expect(2) = 1e-046
Identities = 65/83 (78%), Positives = 78/83 (93%)
Frame = +3 / +2
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQA +P+IQ++G+W S++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 1106 IAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 1285
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGLQISRILGG +KDR +++KE*
Sbjct: 1286 RGLQISRILGGQRKDRSSKNKE* 1354
Score = 102 bits (218), Expect(3) = 6e-026
Identities = 49/83 (59%), Positives = 51/83 (61%)
Frame = -2 / -3
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
+SL RSFL PPRIREICRPLLKAWL SILVWNSDT GNQA+ A GVN
Sbjct: 1353 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 1174
Query: 121 XXXALIDPHSPIF*ITGLIAWAI 53
L D H P I GL A AI
Sbjct: 1173 RASVLTDDHIPSCWIRGLHACAI 1105
Score = 43.7 bits (89), Expect(2) = 1e-046
Identities = 13/19 (68%), Positives = 19/19 (100%)
Frame = +3 / +3
Query: 3 IFVCILAFMPTGWGLLLIA 59
+F+C+LAFMPTGWG+LL++
Sbjct: 957 LFICMLAFMPTGWGMLLVS 1013
Score = 30.9 bits (61), Expect(3) = 6e-026
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 52 RSKPHPVGMKARMQ 11
RS PHPVGMKA MQ
Sbjct: 1006 RSIPHPVGMKASMQ 965
Score = 23.5 bits (45), Expect(3) = 6e-026
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2 / -2
Query: 409 VRHTHTYIRTLIFSEP 362
+RH H Y+ L+F P
Sbjct: 1378 IRHLHVYMSLLVF*RP 1331
>dbj|BD181338.1| A stress-responsive promoter
Length = 2000
Score = 165 bits (354), Expect(2) = 1e-046
Identities = 65/83 (78%), Positives = 78/83 (93%)
Frame = +3 / +2
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQA +P+IQ++G+W S++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 1106 IAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 1285
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGLQISRILGG +KDR +++KE*
Sbjct: 1286 RGLQISRILGGQRKDRSSKNKE* 1354
Score = 102 bits (218), Expect(3) = 6e-026
Identities = 49/83 (59%), Positives = 51/83 (61%)
Frame = -2 / -3
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
+SL RSFL PPRIREICRPLLKAWL SILVWNSDT GNQA+ A GVN
Sbjct: 1353 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 1174
Query: 121 XXXALIDPHSPIF*ITGLIAWAI 53
L D H P I GL A AI
Sbjct: 1173 RASVLTDDHIPSCWIRGLHACAI 1105
Score = 43.7 bits (89), Expect(2) = 1e-046
Identities = 13/19 (68%), Positives = 19/19 (100%)
Frame = +3 / +3
Query: 3 IFVCILAFMPTGWGLLLIA 59
+F+C+LAFMPTGWG+LL++
Sbjct: 957 LFICMLAFMPTGWGMLLVS 1013
Score = 30.9 bits (61), Expect(3) = 6e-026
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 52 RSKPHPVGMKARMQ 11
RS PHPVGMKA MQ
Sbjct: 1006 RSIPHPVGMKASMQ 965
Score = 23.5 bits (45), Expect(3) = 6e-026
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2 / -2
Query: 409 VRHTHTYIRTLIFSEP 362
+RH H Y+ L+F P
Sbjct: 1378 IRHLHVYMSLLVF*RP 1331
>gb|AQ959103.1|AQ959103 LEREH30TRB LERE Arabidopsis thaliana genomic clone LEREH30, DNA
sequence
Length = 538
Score = 163 bits (351), Expect(2) = 2e-046
Identities = 65/82 (79%), Positives = 74/82 (90%)
Frame = +3 / -3
Query: 48 LLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 227
L IAQA +PV+ + G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQA
Sbjct: 248 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 69
Query: 228 FSRGLQISRILGGHKKDRGTRS 293
FSRGLQISRILGGH+KDR + S
Sbjct: 68 FSRGLQISRILGGHRKDRSSLS 3
Score = 44.1 bits (90), Expect(2) = 2e-046
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +3 / -3
Query: 3 IFVCILAFMPTGWGLLLIAQ 62
I VCILAFMPTGWG+LL+++
Sbjct: 392 IIVCILAFMPTGWGMLLVSK 333
>emb|AX651854.1| Sequence 720 from Patent WO03000898
Length = 5892
Score = 164 bits (353), Expect(2) = 6e-046
Identities = 65/82 (79%), Positives = 75/82 (91%)
Frame = +3 / +1
Query: 57 AQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSR 236
A A +PV+ + G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFSR
Sbjct: 5647 ALACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSR 5826
Query: 237 GLQISRILGGHKKDRGTRSKE* 302
GLQISRILGGH+KDR +R+KE*
Sbjct: 5827 GLQISRILGGHRKDRSSRNKE* 5892
Score = 41.8 bits (85), Expect(2) = 6e-046
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3 / +2
Query: 3 IFVCILAFMPTGWGLLL 53
I VCILAFMPTGWG+LL
Sbjct: 5603 IIVCILAFMPTGWGMLL 5653
>gb|CW796846.1|CW796846 WiscDsLox468C6 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 751
Score = 170 bits (366), Expect(2) = 2e-045
Identities = 68/85 (80%), Positives = 78/85 (91%)
Frame = +3 / -2
Query: 48 LLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 227
L IAQA +PV+ + G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQA
Sbjct: 279 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 100
Query: 228 FSRGLQISRILGGHKKDRGTRSKE* 302
FSRGLQISRILGGH+KDR +R+KE*
Sbjct: 99 FSRGLQISRILGGHRKDRSSRNKE* 25
Score = 34.5 bits (69), Expect(2) = 2e-045
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3 / -2
Query: 3 IFVCILAFMPTGWGLLLIAQ 62
I ILAFMP GWG+LL+++
Sbjct: 423 IIXXILAFMPXGWGMLLVSK 364
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 170 bits (366), Expect = 3e-041
Identities = 68/85 (80%), Positives = 78/85 (91%)
Frame = +3 / -3
Query: 48 LLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 227
L IAQA +PV+ + G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQA
Sbjct: 3923675 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 3923496
Query: 228 FSRGLQISRILGGHKKDRGTRSKE* 302
FSRGLQISRILGGH+KDR +R+KE*
Sbjct: 3923495 FSRGLQISRILGGHRKDRSSRNKE* 3923421
Score = 130 bits (279), Expect = 3e-029
Identities = 52/83 (62%), Positives = 68/83 (81%)
Frame = +3 / +3
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQ+ +P+IQ+ G+W + LA Y+++MG LLF PIAF+AWFPF+SEFQTRMLFNQAFS
Sbjct: 13467057 IAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFS 13467236
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGL ISRIL G +K R +++K+*
Sbjct: 13467237 RGLHISRILSGQRKHRSSKNKD* 13467305
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 170 bits (366), Expect = 3e-041
Identities = 68/85 (80%), Positives = 78/85 (91%)
Frame = +3 / -1
Query: 48 LLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 227
L IAQA +PV+ + G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQA
Sbjct: 4110702 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 4110523
Query: 228 FSRGLQISRILGGHKKDRGTRSKE* 302
FSRGLQISRILGGH+KDR +R+KE*
Sbjct: 4110522 FSRGLQISRILGGHRKDRSSRNKE* 4110448
Score = 130 bits (279), Expect = 3e-029
Identities = 52/83 (62%), Positives = 68/83 (81%)
Frame = +3 / +3
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQ+ +P+IQ+ G+W + LA Y+++MG LLF PIAF+AWFPF+SEFQTRMLFNQAFS
Sbjct: 14550912 IAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFS 14551091
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGL ISRIL G +K R +++K+*
Sbjct: 14551092 RGLHISRILSGQRKHRSSKNKD* 14551160
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 166 bits (358), Expect = 4e-040
Identities = 67/86 (77%), Positives = 78/86 (90%)
Frame = +3 / +2
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
L IAQA +P+IQ++G W S++ LARGYEILMGLLLFTP+AFLAWFPFVSEFQTRMLFNQ
Sbjct: 13606886 LFKIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWFPFVSEFQTRMLFNQ 13607065
Query: 225 AFSRGLQISRILGGHKKDRGTRSKE* 302
AFSRGLQISRILGG +KDR +++KE*
Sbjct: 13607066 AFSRGLQISRILGGQRKDRSSKNKE* 13607143
Score = 160 bits (344), Expect = 4e-038
Identities = 61/93 (65%), Positives = 77/93 (82%)
Frame = +3 / +2
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
I +LAF+PTGW LL I+Q RP+++ +G+WGS+KALARGYE +MG+++F P+ LAWF
Sbjct: 5712935 IMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWF 5713114
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 281
PFVSEFQTR+LFNQAFSRGLQI RIL G KK +
Sbjct: 5713115 PFVSEFQTRLLFNQAFSRGLQIQRILAGGKKQK 5713213
Score = 131 bits (280), Expect = 2e-029
Identities = 48/90 (53%), Positives = 70/90 (77%)
Frame = +3 / -3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F C+L F+PTGW LL +A + V++ +GLW +++ R Y+ MG+L+F+PIA L+WF
Sbjct: 15462301 MFACVLGFIPTGWALLSLAITWKQVLRVLGLWETVREFGRIYDAAMGMLIFSPIALLSWF 15462122
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHK 272
PF+S FQ+R+LFNQAFSRGL+IS IL G++
Sbjct: 15462121 PFISTFQSRLLFNQAFSRGLEISIILAGNR 15462032
>ref|NM_123045.2| Arabidopsis thaliana ATGSL09 (GLUCAN SYNTHASE-LIKE 9);
1,3-beta-glucan synthase AT5G36870 (ATGSL09) mRNA,
complete cds
Length = 5589
Score = 165 bits (355), Expect = 1e-039
Identities = 64/100 (64%), Positives = 84/100 (84%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F+C+LA +PTGWGLLLIAQ+ +P+IQ+ G+W + LA Y+++MG LLF PIAF+AWF
Sbjct: 5290 VFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWF 5469
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRSKE* 302
PF+SEFQTRMLFNQAFSRGL ISRIL G +K R +++K+*
Sbjct: 5470 PFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD* 5589
Score = 112 bits (240), Expect = 8e-024
Identities = 54/98 (55%), Positives = 58/98 (59%)
Frame = -2 / -2
Query: 298 SLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXXX 119
SL R FL P RIREICRPLLKAWL SILVWNSD NGNQA A+G+N
Sbjct: 5585 SLFLEERCFL*PLRIREICRPLLKAWLKSILVWNSDMNGNQAINAIGINKREPITRS*TQ 5406
Query: 118 XXALIDPHSPIF*ITGLIAWAIRSKPHPVGMKARMQTK 5
+ H P *I GL AI S PHPVG+ A MQ K
Sbjct: 5405 ANVITQDHIPGC*IRGLQDCAISSNPHPVGINASMQRK 5292
>gb|AQ959102.1|AQ959102 LEREH30TR LERE Arabidopsis thaliana genomic clone LEREH30, DNA
sequence
Length = 382
Score = 163 bits (351), Expect(2) = 1e-039
Identities = 65/82 (79%), Positives = 74/82 (90%)
Frame = +3 / -3
Query: 48 LLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 227
L IAQA +PV+ + G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQA
Sbjct: 248 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 69
Query: 228 FSRGLQISRILGGHKKDRGTRS 293
FSRGLQISRILGGH+KDR + S
Sbjct: 68 FSRGLQISRILGGHRKDRSSLS 3
Score = 21.2 bits (40), Expect(2) = 1e-039
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3 / -3
Query: 30 PTGWGLLL 53
PTGWG+ L
Sbjct: 368 PTGWGMAL 345
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 165 bits (354), Expect = 1e-039
Identities = 65/83 (78%), Positives = 78/83 (93%)
Frame = +3 / -1
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQA +P+IQ++G+W S++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFS
Sbjct: 1648127 IAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFS 1647948
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGLQISRILGG +KDR +++KE*
Sbjct: 1647947 RGLQISRILGGQRKDRSSKNKE* 1647879
Score = 126 bits (270), Expect = 6e-028
Identities = 51/76 (67%), Positives = 61/76 (80%)
Frame = +3 / +1
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
+L I QA+R V + +G W S+K L R YE +MGL++FTPIA L+WFPFVSEFQTR+LFNQ
Sbjct: 1988791 VLKIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFNQ 1988970
Query: 225 AFSRGLQISRILGGHK 272
AFSRGLQIS IL G K
Sbjct: 1988971 AFSRGLQISMILAGKK 1989018
Score = 102 bits (218), Expect = 9e-021
Identities = 49/83 (59%), Positives = 51/83 (61%)
Frame = -2 / +1
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 122
+SL RSFL PPRIREICRPLLKAWL SILVWNSDT GNQA+ A GVN
Sbjct: 1647880 HSLFFEDRSFL*PPRIREICRPLLKAWLKSILVWNSDTKGNQAKNATGVNRSKPITIS*P 1648059
Query: 121 XXXALIDPHSPIF*ITGLIAWAI 53
L D H P I GL A AI
Sbjct: 1648060 RASVLTDDHIPSCWIRGLHACAI 1648128
>gb|AU228526.1|AU228526 AU228526 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-26-N18 3',
mRNA sequence
Length = 423
Score = 133 bits (285), Expect(2) = 6e-039
Identities = 54/63 (85%), Positives = 61/63 (96%)
Frame = +3 / -3
Query: 114 LARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRS 293
LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQAFSRG+QISRILGG +KDR +++
Sbjct: 316 LARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGVQISRILGGQRKDRSSKN 137
Query: 294 KE* 302
KE*
Sbjct: 136 KE* 128
Score = 91.3 bits (193), Expect(2) = 7e-022
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = -2 / +3
Query: 301 YSLLRVPRSFLCPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVN 152
+SL RSFL PPRIREIC PLLKAWL SILVWNSDT GNQA+ A GVN
Sbjct: 129 HSLFFEDRSFL*PPRIREICTPLLKAWLKSILVWNSDTKGNQAKNATGVN 278
Score = 49.6 bits (102), Expect(2) = 6e-039
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +3 / -2
Query: 6 FVCILAFMPTGWGLLLIAQAI 68
F+C+LAFMPTGWG+LLIAQA+
Sbjct: 422 FICMLAFMPTGWGMLLIAQAL 360
Score = 34.5 bits (69), Expect(2) = 7e-022
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -2 / +1
Query: 70 LIAWAIRSKPHPVGMKARMQ 11
L A A+RS PHPVGMKA MQ
Sbjct: 358 LNACAMRSIPHPVGMKASMQ 417
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete
sequence
Length = 104009
Score = 160 bits (344), Expect = 4e-038
Identities = 61/93 (65%), Positives = 77/93 (82%)
Frame = +3 / +2
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
I +LAF+PTGW LL I+Q RP+++ +G+WGS+KALARGYE +MG+++F P+ LAWF
Sbjct: 14078 IMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWF 14257
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 281
PFVSEFQTR+LFNQAFSRGLQI RIL G KK +
Sbjct: 14258 PFVSEFQTRLLFNQAFSRGLQIQRILAGGKKQK 14356
>gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F5 map PR1, complete
sequence
Length = 102585
Score = 160 bits (344), Expect = 4e-038
Identities = 61/93 (65%), Positives = 77/93 (82%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
I +LAF+PTGW LL I+Q RP+++ +G+WGS+KALARGYE +MG+++F P+ LAWF
Sbjct: 96280 IMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWF 96459
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 281
PFVSEFQTR+LFNQAFSRGLQI RIL G KK +
Sbjct: 96460 PFVSEFQTRLLFNQAFSRGLQIQRILAGGKKQK 96558
>tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase (LAP1) mRNA, complete cds
Length = 5772
Score = 160 bits (344), Expect = 4e-038
Identities = 61/93 (65%), Positives = 77/93 (82%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
I +LAF+PTGW LL I+Q RP+++ +G+WGS+KALARGYE +MG+++F P+ LAWF
Sbjct: 5491 IMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWF 5670
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 281
PFVSEFQTR+LFNQAFSRGLQI RIL G KK +
Sbjct: 5671 PFVSEFQTRLLFNQAFSRGLQIQRILAGGKKQK 5769
>gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, complete cds
Length = 5950
Score = 160 bits (344), Expect = 4e-038
Identities = 61/93 (65%), Positives = 77/93 (82%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
I +LAF+PTGW LL I+Q RP+++ +G+WGS+KALARGYE +MG+++F P+ LAWF
Sbjct: 5644 IMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWF 5823
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 281
PFVSEFQTR+LFNQAFSRGLQI RIL G KK +
Sbjct: 5824 PFVSEFQTRLLFNQAFSRGLQIQRILAGGKKQK 5922
>ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synthase AT2G13680 mRNA,
complete cds
Length = 5772
Score = 160 bits (344), Expect = 4e-038
Identities = 61/93 (65%), Positives = 77/93 (82%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
I +LAF+PTGW LL I+Q RP+++ +G+WGS+KALARGYE +MG+++F P+ LAWF
Sbjct: 5491 IMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWF 5670
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDR 281
PFVSEFQTR+LFNQAFSRGLQI RIL G KK +
Sbjct: 5671 PFVSEFQTRLLFNQAFSRGLQIQRILAGGKKQK 5769
>gb|AQ957761.1|AQ957761 LERAR55TF LERA Arabidopsis thaliana genomic clone LERAR55, DNA
sequence
Length = 668
Score = 160 bits (343), Expect = 5e-038
Identities = 60/89 (67%), Positives = 76/89 (85%)
Frame = +3 / +3
Query: 15 ILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVS 194
+LAF+PTGW LL I+Q RP+++ +G+WGS+KALARGYE +MG+++F P+ LAWFPFVS
Sbjct: 15 LLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWFPFVS 194
Query: 195 EFQTRMLFNQAFSRGLQISRILGGHKKDR 281
EFQTR+LFNQAFSRGLQI RIL G KK +
Sbjct: 195 EFQTRLLFNQAFSRGLQIQRILAGGKKQK 281
>ref|NM_100528.1| Arabidopsis thaliana ATGSL07 (GLUCAN SYNTHASE-LIKE 7);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT1G06490 (ATGSL07) mRNA, complete cds
Length = 5802
Score = 155 bits (333), Expect = 1e-036
Identities = 61/90 (67%), Positives = 73/90 (81%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
+F ILAF+PTGW +LLI QA+R V + +G W S+K L R YE +MGL++FTPIA L+WF
Sbjct: 5506 LFASILAFLPTGWAILLIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWF 5685
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHK 272
PFVSEFQTR+LFNQAFSRGLQIS IL G K
Sbjct: 5686 PFVSEFQTRLLFNQAFSRGLQISMILAGKK 5775
>gb|AQ959101.1|AQ959101 LEREH30TFB LERE Arabidopsis thaliana genomic clone LEREH30, DNA
sequence
Length = 711
Score = 128 bits (274), Expect(2) = 8e-036
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +3 / +2
Query: 48 LLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 227
L IAQA +PV+ + G WGS++ LARGYEI+MGLLLFTP+AFLAWFPFVSEFQTRMLFNQA
Sbjct: 521 LQIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQA 700
Query: 228 FSR 236
FSR
Sbjct: 701 FSR 709
Score = 44.1 bits (90), Expect(2) = 8e-036
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +3 / +2
Query: 3 IFVCILAFMPTGWGLLLIAQ 62
I VCILAFMPTGWG+LL+++
Sbjct: 377 IIVCILAFMPTGWGMLLVSK 436
>gb|AI995793.1|AI995793 701548593 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701548593, mRNA sequence
Length = 618
Score = 151 bits (325), Expect = 1e-035
Identities = 58/94 (61%), Positives = 77/94 (81%)
Frame = +3 / -3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF C+LAF+PTGWG+L IA A +PV++++G+W SI++LAR Y+ LMG+L+F P+A +WF
Sbjct: 460 IFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWF 281
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 284
PFVS FQTRM+FNQAFSRGL+IS IL G + G
Sbjct: 280 PFVSTFQTRMMFNQAFSRGLEISLILAGDNPNSG 179
>gb|AV523506.1|AV523506 AV523506 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL30a04F 3', mRNA
sequence
Length = 626
Score = 151 bits (325), Expect = 1e-035
Identities = 58/94 (61%), Positives = 77/94 (81%)
Frame = +3 / -3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF C+LAF+PTGWG+L IA A +PV++++G+W SI++LAR Y+ LMG+L+F P+A +WF
Sbjct: 456 IFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWF 277
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 284
PFVS FQTRM+FNQAFSRGL+IS IL G + G
Sbjct: 276 PFVSTFQTRMMFNQAFSRGLEISLILAGDNPNSG 175
>gb|AY099734.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1780
Score = 151 bits (325), Expect = 1e-035
Identities = 58/94 (61%), Positives = 77/94 (81%)
Frame = +3 / +2
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF C+LAF+PTGWG+L IA A +PV++++G+W SI++LAR Y+ LMG+L+F P+A +WF
Sbjct: 1295 IFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWF 1474
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 284
PFVS FQTRM+FNQAFSRGL+IS IL G + G
Sbjct: 1475 PFVSTFQTRMMFNQAFSRGLEISLILAGDNPNSG 1576
>gb|BT000346.1| Arabidopsis thaliana putative glucan synthase (At3g07160) mRNA,
complete cds
Length = 1404
Score = 151 bits (325), Expect = 1e-035
Identities = 58/94 (61%), Positives = 77/94 (81%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF C+LAF+PTGWG+L IA A +PV++++G+W SI++LAR Y+ LMG+L+F P+A +WF
Sbjct: 1024 IFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWF 1203
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 284
PFVS FQTRM+FNQAFSRGL+IS IL G + G
Sbjct: 1204 PFVSTFQTRMMFNQAFSRGLEISLILAGDNPNSG 1305
>dbj|AK221151.1| Arabidopsis thaliana mRNA for putative glucan synthase, complete
cds, clone: RAFL22-94-A16
Length = 1088
Score = 151 bits (325), Expect = 1e-035
Identities = 58/94 (61%), Positives = 77/94 (81%)
Frame = +3 / +3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF C+LAF+PTGWG+L IA A +PV++++G+W SI++LAR Y+ LMG+L+F P+A +WF
Sbjct: 639 IFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWF 818
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 284
PFVS FQTRM+FNQAFSRGL+IS IL G + G
Sbjct: 819 PFVSTFQTRMMFNQAFSRGLEISLILAGDNPNSG 920
>ref|NM_111596.1| Arabidopsis thaliana ATGSL10 (GLUCAN SYNTHASE-LIKE 10);
1,3-beta-glucan synthase AT3G07160 (ATGSL10) mRNA,
complete cds
Length = 5981
Score = 151 bits (325), Expect = 1e-035
Identities = 58/94 (61%), Positives = 77/94 (81%)
Frame = +3 / +1
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF C+LAF+PTGWG+L IA A +PV++++G+W SI++LAR Y+ LMG+L+F P+A +WF
Sbjct: 5509 IFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWF 5688
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 284
PFVS FQTRM+FNQAFSRGL+IS IL G + G
Sbjct: 5689 PFVSTFQTRMMFNQAFSRGLEISLILAGDNPNSG 5790
>emb|BX825904.1|CNS0A6G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL71ZB05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1053
Score = 149 bits (320), Expect = 7e-035
Identities = 57/88 (64%), Positives = 74/88 (84%)
Frame = +3 / +3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF C+LAF+PTGWG+L IA A +PV++++G+W SI+ LAR Y+ LMG+L+F P+A +WF
Sbjct: 597 IFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRCLARLYDALMGMLIFLPVALCSWF 776
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGG 266
PFVS FQTRM+FNQAFSRGL+IS IL G
Sbjct: 777 PFVSTFQTRMMFNQAFSRGLEISLILAG 860
>gb|AY085106.1| Arabidopsis thaliana clone 12977 mRNA, complete sequence
Length = 1267
Score = 148 bits (318), Expect = 1e-034
Identities = 57/94 (60%), Positives = 76/94 (80%)
Frame = +3 / +3
Query: 3 IFVCILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWF 182
IF C+LAF+PTGWG+L IA A +PV++++G+W SI++LAR Y+ LMG+L+F P+A +WF
Sbjct: 795 IFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWF 974
Query: 183 PFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 284
PFVS FQTRM+ NQAFSRGL+IS IL G + G
Sbjct: 975 PFVSTFQTRMMXNQAFSRGLEISLILAGDNPNSG 1076
>ref|NM_115772.2| Arabidopsis thaliana ATGSL11 (GLUCAN SYNTHASE-LIKE 11);
1,3-beta-glucan synthase/ transferase, transferring
glycosyl groups AT3G59100 (ATGSL11) mRNA, complete cds
Length = 5805
Score = 142 bits (304), Expect = 1e-032
Identities = 55/86 (63%), Positives = 68/86 (79%)
Frame = +3 / +1
Query: 15 ILAFMPTGWGLLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVS 194
+LAF+PTGW +LLI Q +R I+ +G+W S+K L R YE +MGL++F PIA L+WFP VS
Sbjct: 5521 VLAFLPTGWAILLIGQVLRSPIKALGVWDSVKELGRAYENIMGLVIFAPIAVLSWFPIVS 5700
Query: 195 EFQTRMLFNQAFSRGLQISRILGGHK 272
EFQ R+LFNQAFSRGLQIS IL G K
Sbjct: 5701 EFQARLLFNQAFSRGLQISMILAGRK 5778
>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8
Length = 70098
Score = 130 bits (279), Expect(2) = 1e-032
Identities = 52/83 (62%), Positives = 68/83 (81%)
Frame = +3 / +3
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IAQ+ +P+IQ+ G+W + LA Y+++MG LLF PIAF+AWFPF+SEFQTRMLFNQAFS
Sbjct: 63498 IAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFS 63677
Query: 234 RGLQISRILGGHKKDRGTRSKE* 302
RGL ISRIL G +K R +++K+*
Sbjct: 63678 RGLHISRILSGQRKHRSSKNKD* 63746
Score = 39.6 bits (80), Expect(2) = 1e-032
Identities = 12/19 (63%), Positives = 18/19 (94%)
Frame = +3 / +2
Query: 3 IFVCILAFMPTGWGLLLIA 59
+F+C+LA +PTGWGLLL++
Sbjct: 63287 VFLCMLALIPTGWGLLLVS 63343
>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I,
complete sequence
Length = 93724
Score = 126 bits (270), Expect(2) = 1e-032
Identities = 51/76 (67%), Positives = 61/76 (80%)
Frame = +3 / -1
Query: 45 LLLIAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 224
+L I QA+R V + +G W S+K L R YE +MGL++FTPIA L+WFPFVSEFQTR+LFNQ
Sbjct: 65218 VLKIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFNQ 65039
Query: 225 AFSRGLQISRILGGHK 272
AFSRGLQIS IL G K
Sbjct: 65038 AFSRGLQISMILAGKK 64991
Score = 35.0 bits (70), Expect(2) = 1e-032
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3 / -1
Query: 3 IFVCILAFMPTGWGLLLIA 59
+F ILAF+PTGW +LL++
Sbjct: 65350 LFASILAFLPTGWAILLVS 65294
>gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome III BAC T1B9 genomic sequence, complete
sequence
Length = 99128
Score = 116 bits (249), Expect(2) = 5e-031
Identities = 46/77 (59%), Positives = 62/77 (80%)
Frame = +3 / +3
Query: 54 IAQAIRPVIQKIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 233
IA A +PV++++G+W SI++LAR Y+ LMG+L+F P+A +WFPFVS FQTRM+FNQAFS
Sbjct: 69405 IACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVSTFQTRMMFNQAFS 69584
Query: 234 RGLQISRILGGHKKDRG 284
RGL+IS IL G + G
Sbjct: 69585 RGLEISLILAGDNPNSG 69635
Score = 39.6 bits (80), Expect(2) = 5e-031
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +3 / +2
Query: 3 IFVCILAFMPTGWGLLLIA 59
IF C+LAF+PTGWG+L ++
Sbjct: 69257 IFACVLAFIPTGWGILSVS 69313
>gb|CL499023.1|CL499023 SAIL_662_E12.v2 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_662_E12.v2, DNA sequence
Length = 1066
Score = 135 bits (289), Expect = 1e-030
Identities = 55/63 (87%), Positives = 60/63 (95%)
Frame = +3 / -2
Query: 114 LARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRS 293
LARGYEI+MGL LFTP+AFLAWFPFVSEFQTRMLFNQAFS GLQISRILGGH+KDR +R+
Sbjct: 450 LARGYEIVMGLFLFTPVAFLAWFPFVSEFQTRMLFNQAFSTGLQISRILGGHRKDRSSRN 271
Query: 294 KE* 302
KE*
Sbjct: 270 KE* 262
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,284,826,439
Number of Sequences: 1013581
Number of extensions: 18612984
Number of successful extensions: 200593
Number of sequences better than 1.0e-020: 94
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 37332233585
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)