TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131584.2.4
(739 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AI998209.1|AI998209 701515770 A. thaliana, Columbia Col-... 231 2e-059
gb|AV533116.1|AV533116 AV533116 Arabidopsis thaliana flower... 231 2e-059
gb|AY086601.1| Arabidopsis thaliana clone 26123 mRNA, compl... 231 2e-059
gb|AY087177.1| Arabidopsis thaliana clone 32457 mRNA, compl... 231 2e-059
ref|NM_130332.2| Arabidopsis thaliana unknown protein AT2G4... 231 2e-059
gb|F20137.1|F20137 ATTS6176 AC16H Arabidopsis thaliana cDNA... 230 3e-059
gb|CK118493.1|CK118493 216o12.p1 AtM1 Arabidopsis thaliana ... 230 3e-059
gb|BP562727.2|BP562727 BP562727 RAFL14 Arabidopsis thaliana... 230 3e-059
gb|CB254025.1|CB254025 80-E015391-019-006-O19-T7R MPIZ-ADIS... 230 3e-059
gb|BT004783.1| Arabidopsis thaliana At2g47640 gene, complet... 230 3e-059
emb|BX821379.1|CNS0AA65 Arabidopsis thaliana Full-length cD... 230 3e-059
ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G6... 230 3e-059
ref|NM_180146.3| Arabidopsis thaliana unknown protein AT2G4... 230 3e-059
ref|NM_201981.2| Arabidopsis thaliana unknown protein AT2G4... 230 3e-059
gb|CB264605.1|CB264605 49-E014658-035-002-A13-T7R MPIZ-ADIS... 226 4e-058
emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome ... 143 1e-053
gb|BP613407.1|BP613407 BP613407 RAFL16 Arabidopsis thaliana... 173 2e-053
gb|BP864880.1|BP864880 BP864880 RAFL21 Arabidopsis thaliana... 207 3e-052
gb|AU226468.1|AU226468 AU226468 RAFL14 Arabidopsis thaliana... 204 2e-051
gb|BP571612.1|BP571612 BP571612 RAFL14 Arabidopsis thaliana... 203 7e-051
gb|BP866835.1|BP866835 BP866835 RAFL21 Arabidopsis thaliana... 203 7e-051
gb|BP821598.1|BP821598 BP821598 RAFL19 Arabidopsis thaliana... 191 2e-047
gb|AV819279.1|AV819279 AV819279 RAFL11 Arabidopsis thaliana... 191 3e-047
gb|BP815339.1|BP815339 BP815339 RAFL19 Arabidopsis thaliana... 172 3e-047
gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B... 92 4e-045
gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A... 92 5e-045
gb|BP581041.1|BP581041 BP581041 RAFL14 Arabidopsis thaliana... 116 1e-042
gb|BP851888.1|BP851888 BP851888 RAFL21 Arabidopsis thaliana... 172 1e-041
gb|BP854615.1|BP854615 BP854615 RAFL21 Arabidopsis thaliana... 172 1e-041
gb|AI999102.1|AI999102 701554462 A. thaliana, Columbia Col-... 169 8e-041
gb|BP665200.1|BP665200 BP665200 RAFL21 Arabidopsis thaliana... 94 7e-040
gb|BP858325.1|BP858325 BP858325 RAFL21 Arabidopsis thaliana... 100 6e-039
gb|BP869127.1|BP869127 BP869127 RAFL21 Arabidopsis thaliana... 163 7e-039
gb|BP788381.1|BP788381 BP788381 RAFL7 Arabidopsis thaliana ... 162 9e-039
gb|BP831765.1|BP831765 BP831765 RAFL19 Arabidopsis thaliana... 159 1e-037
gb|BP621376.1|BP621376 BP621376 RAFL16 Arabidopsis thaliana... 158 2e-037
gb|H36625.1|H36625 14293 Lambda-PRL2 Arabidopsis thaliana c... 151 6e-036
gb|BP851641.1|BP851641 BP851641 RAFL21 Arabidopsis thaliana... 109 1e-035
gb|BP636278.1|BP636278 BP636278 RAFL18 Arabidopsis thaliana... 83 2e-035
gb|AV549536.1|AV549536 AV549536 Arabidopsis thaliana roots ... 149 7e-035
gb|BP867804.1|BP867804 BP867804 RAFL21 Arabidopsis thaliana... 149 7e-035
gb|AV832022.1|AV832022 AV832022 RAFL11 Arabidopsis thaliana... 138 9e-035
gb|AY042797.1| Arabidopsis thaliana small nuclear ribonucle... 138 9e-035
gb|AV818857.1|AV818857 AV818857 RAFL11 Arabidopsis thaliana... 138 9e-035
gb|BP650469.1|BP650469 BP650469 RAFL19 Arabidopsis thaliana... 95 2e-034
gb|BP844944.1|BP844944 BP844944 RAFL21 Arabidopsis thaliana... 112 3e-034
gb|AV820625.1|AV820625 AV820625 RAFL11 Arabidopsis thaliana... 122 5e-034
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 143 8e-033
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 143 8e-033
gb|BP623210.1|BP623210 BP623210 RAFL17 Arabidopsis thaliana... 138 1e-031
gb|BP848760.1|BP848760 BP848760 RAFL21 Arabidopsis thaliana... 71 2e-029
gb|BP850718.1|BP850718 BP850718 RAFL21 Arabidopsis thaliana... 130 6e-029
gb|BP864529.1|BP864529 BP864529 RAFL21 Arabidopsis thaliana... 118 8e-029
gb|BP868432.1|BP868432 BP868432 RAFL21 Arabidopsis thaliana... 114 6e-028
gb|BP597520.1|BP597520 BP597520 RAFL15 Arabidopsis thaliana... 124 3e-027
gb|BZ379263.1|BZ379263 SALK_113104.21.35.x Arabidopsis thal... 75 3e-024
gb|BP808679.1|BP808679 BP808679 RAFL16 Arabidopsis thaliana... 58 8e-024
gb|BP670363.1|BP670363 BP670363 RAFL21 Arabidopsis thaliana... 94 2e-023
gb|AV535104.1|AV535104 AV535104 Arabidopsis thaliana flower... 103 6e-021
>gb|AI998209.1|AI998209 701515770 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701515770, mRNA sequence
Length = 515
Score = 231 bits (499), Expect = 2e-059
Identities = 95/106 (89%), Positives = 101/106 (95%)
Frame = +1 / -1
Query: 178 MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 357
M ++ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 443 MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 264
Query: 358 VREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
VREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 263 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 126
Score = 158 bits (340), Expect = 2e-037
Identities = 71/92 (77%), Positives = 75/92 (81%)
Frame = -3 / +1
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
HFGFL T+MTESP RNILLMN SLFTG AFFLP PV G SVHIS TFS TMLQ S A T
Sbjct: 127 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 306
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLL RQL++T VLFLTLIIRT+ GPVLN
Sbjct: 307 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 402
>gb|AV533116.1|AV533116 AV533116 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB056b01F 3', mRNA sequence
Length = 591
Score = 231 bits (499), Expect = 2e-059
Identities = 95/106 (89%), Positives = 101/106 (95%)
Frame = +1 / -2
Query: 178 MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 357
M ++ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 512 MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 333
Query: 358 VREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
VREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 332 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 195
Score = 155 bits (334), Expect = 1e-036
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = -3 / +1
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
H GFL T+MTESP RNILLMN SL TGRAFF P PV G SVHIS TFS TMLQ SKA T
Sbjct: 196 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 375
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLLLRQL+ T VLFLTLII+T+ GPVLN
Sbjct: 376 RPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 471
>gb|AY086601.1| Arabidopsis thaliana clone 26123 mRNA, complete sequence
Length = 619
Score = 231 bits (499), Expect = 2e-059
Identities = 95/106 (89%), Positives = 101/106 (95%)
Frame = +1 / +2
Query: 178 MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 357
M ++ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 134 MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 313
Query: 358 VREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
VREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 314 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 451
Score = 158 bits (340), Expect = 2e-037
Identities = 71/92 (77%), Positives = 75/92 (81%)
Frame = -3 / -2
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
HFGFL T+MTESP RNILLMN SLFTG AFFLP PV G SVHIS TFS TMLQ S A T
Sbjct: 450 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 271
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLL RQL++T VLFLTLIIRT+ GPVLN
Sbjct: 270 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 175
>gb|AY087177.1| Arabidopsis thaliana clone 32457 mRNA, complete sequence
Length = 646
Score = 231 bits (499), Expect = 2e-059
Identities = 95/106 (89%), Positives = 101/106 (95%)
Frame = +1 / +1
Query: 178 MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 357
M ++ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 133 MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 312
Query: 358 VREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
VREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 313 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 450
Score = 155 bits (334), Expect = 1e-036
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = -3 / -3
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
H GFL T+MTESP RNILLMN SL TGRAFF P PV G SVHIS TFS TMLQ SKA T
Sbjct: 449 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 270
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLLLRQL+ T VLFLTLII+T+ GPVLN
Sbjct: 269 RPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 174
>ref|NM_130332.2| Arabidopsis thaliana unknown protein AT2G47640 transcript variant
AT2G47640.1 mRNA, complete cds
Length = 624
Score = 231 bits (499), Expect = 2e-059
Identities = 95/106 (89%), Positives = 101/106 (95%)
Frame = +1 / +1
Query: 178 MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 357
M ++ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 139 MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 318
Query: 358 VREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
VREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 319 VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 456
Score = 158 bits (340), Expect = 2e-037
Identities = 71/92 (77%), Positives = 75/92 (81%)
Frame = -3 / -2
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
HFGFL T+MTESP RNILLMN SLFTG AFFLP PV G SVHIS TFS TMLQ S A T
Sbjct: 455 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 276
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLL RQL++T VLFLTLIIRT+ GPVLN
Sbjct: 275 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 180
>gb|F20137.1|F20137 ATTS6176 AC16H Arabidopsis thaliana cDNA clone TAP0004 similar to
Homo sapiens., mRNA sequence
Length = 574
Score = 230 bits (497), Expect = 3e-059
Identities = 95/104 (91%), Positives = 101/104 (97%)
Frame = +1 / +2
Query: 184 DENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVR 363
+E+ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVR
Sbjct: 107 EEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVR 286
Query: 364 EMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
EMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 287 EMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 418
Score = 158 bits (340), Expect = 2e-037
Identities = 71/92 (77%), Positives = 75/92 (81%)
Frame = -3 / -2
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
HFGFL T+MTESP RNILLMN SLFTG AFFLP PV G SVHIS TFS TMLQ S A T
Sbjct: 417 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 238
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLL RQL++T VLFLTLIIRT+ GPVLN
Sbjct: 237 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 142
>gb|CK118493.1|CK118493 216o12.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011O12216
5-PRIME, mRNA sequence
Length = 582
Score = 230 bits (497), Expect = 3e-059
Identities = 95/104 (91%), Positives = 101/104 (97%)
Frame = +1 / +2
Query: 184 DENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVR 363
+E+ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVR
Sbjct: 119 EEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVR 298
Query: 364 EMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
EMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 299 EMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 430
Score = 158 bits (340), Expect = 2e-037
Identities = 71/92 (77%), Positives = 75/92 (81%)
Frame = -3 / -1
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
HFGFL T+MTESP RNILLMN SLFTG AFFLP PV G SVHIS TFS TMLQ S A T
Sbjct: 429 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 250
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLL RQL++T VLFLTLIIRT+ GPVLN
Sbjct: 249 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 154
>gb|BP562727.2|BP562727 BP562727 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-35-O15 5',
mRNA sequence
Length = 491
Score = 230 bits (497), Expect = 3e-059
Identities = 95/104 (91%), Positives = 101/104 (97%)
Frame = +1 / +2
Query: 184 DENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVR 363
+E+ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVR
Sbjct: 113 EEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVR 292
Query: 364 EMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
EMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 293 EMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 424
Score = 158 bits (340), Expect = 2e-037
Identities = 71/92 (77%), Positives = 75/92 (81%)
Frame = -3 / -3
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
HFGFL T+MTESP RNILLMN SLFTG AFFLP PV G SVHIS TFS TMLQ S A T
Sbjct: 423 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 244
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLL RQL++T VLFLTLIIRT+ GPVLN
Sbjct: 243 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 148
>gb|CB254025.1|CB254025 80-E015391-019-006-O19-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768O196Q 5-PRIME, mRNA sequence
Length = 535
Score = 230 bits (497), Expect = 3e-059
Identities = 95/104 (91%), Positives = 101/104 (97%)
Frame = +1 / +1
Query: 184 DENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVR 363
+E+ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVR
Sbjct: 94 EEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVR 273
Query: 364 EMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
EMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 274 EMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 405
Score = 155 bits (334), Expect = 1e-036
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = -3 / -3
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
H GFL T+MTESP RNILLMN SL TGRAFF P PV G SVHIS TFS TMLQ SKA T
Sbjct: 404 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 225
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLLLRQL+ T VLFLTLII+T+ GPVLN
Sbjct: 224 RPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 129
>gb|BT004783.1| Arabidopsis thaliana At2g47640 gene, complete cds
Length = 327
Score = 230 bits (497), Expect = 3e-059
Identities = 95/104 (91%), Positives = 101/104 (97%)
Frame = +1 / +1
Query: 184 DENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVR 363
+E+ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVR
Sbjct: 16 EEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVR 195
Query: 364 EMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
EMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 196 EMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 327
Score = 158 bits (340), Expect = 2e-037
Identities = 71/92 (77%), Positives = 75/92 (81%)
Frame = -3 / -2
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
HFGFL T+MTESP RNILLMN SLFTG AFFLP PV G SVHIS TFS TMLQ S A T
Sbjct: 326 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 147
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLL RQL++T VLFLTLIIRT+ GPVLN
Sbjct: 146 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 51
>emb|BX821379.1|CNS0AA65 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL37ZF02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 586
Score = 230 bits (497), Expect = 3e-059
Identities = 95/104 (91%), Positives = 101/104 (97%)
Frame = +1 / +1
Query: 184 DENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVR 363
+E+ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVR
Sbjct: 115 EEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVR 294
Query: 364 EMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
EMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 295 EMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 426
Score = 158 bits (340), Expect = 2e-037
Identities = 71/92 (77%), Positives = 75/92 (81%)
Frame = -3 / -3
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
HFGFL T+MTESP RNILLMN SLFTG AFFLP PV G SVHIS TFS TMLQ S A T
Sbjct: 425 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 246
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLL RQL++T VLFLTLIIRT+ GPVLN
Sbjct: 245 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 150
>ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G62840 mRNA, complete cds
Length = 1063
Score = 230 bits (497), Expect = 3e-059
Identities = 95/104 (91%), Positives = 101/104 (97%)
Frame = +1 / +1
Query: 184 DENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVR 363
+E+ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVR
Sbjct: 136 EEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVR 315
Query: 364 EMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
EMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 316 EMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 447
Score = 155 bits (334), Expect = 1e-036
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = -3 / -3
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
H GFL T+MTESP RNILLMN SL TGRAFF P PV G SVHIS TFS TMLQ SKA T
Sbjct: 446 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 267
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLLLRQL+ T VLFLTLII+T+ GPVLN
Sbjct: 266 RPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 171
>ref|NM_180146.3| Arabidopsis thaliana unknown protein AT2G47640 transcript variant
AT2G47640.2 mRNA, complete cds
Length = 586
Score = 230 bits (497), Expect = 3e-059
Identities = 95/104 (91%), Positives = 101/104 (97%)
Frame = +1 / +2
Query: 184 DENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVR 363
+E+ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVR
Sbjct: 107 EEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVR 286
Query: 364 EMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
EMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 287 EMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 418
Score = 158 bits (340), Expect = 2e-037
Identities = 71/92 (77%), Positives = 75/92 (81%)
Frame = -3 / -2
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
HFGFL T+MTESP RNILLMN SLFTG AFFLP PV G SVHIS TFS TMLQ S A T
Sbjct: 417 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 238
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLL RQL++T VLFLTLIIRT+ GPVLN
Sbjct: 237 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 142
>ref|NM_201981.2| Arabidopsis thaliana unknown protein AT2G47640 transcript variant
AT2G47640.3 mRNA, complete cds
Length = 594
Score = 230 bits (497), Expect = 3e-059
Identities = 95/104 (91%), Positives = 101/104 (97%)
Frame = +1 / +1
Query: 184 DENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVR 363
+E+ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVR
Sbjct: 115 EEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVR 294
Query: 364 EMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
EMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 295 EMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 426
Score = 158 bits (340), Expect = 2e-037
Identities = 71/92 (77%), Positives = 75/92 (81%)
Frame = -3 / -2
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
HFGFL T+MTESP RNILLMN SLFTG AFFLP PV G SVHIS TFS TMLQ S A T
Sbjct: 425 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 246
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLL RQL++T VLFLTLIIRT+ GPVLN
Sbjct: 245 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 150
>gb|CB264605.1|CB264605 49-E014658-035-002-A13-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000A132Q 5-PRIME, mRNA sequence
Length = 560
Score = 226 bits (489), Expect = 4e-058
Identities = 94/104 (90%), Positives = 100/104 (96%)
Frame = +1 / +3
Query: 184 DENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVR 363
+E+ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENV
Sbjct: 102 EEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVI 281
Query: 364 EMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
EMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 282 EMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 413
Score = 156 bits (335), Expect = 8e-037
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = -3 / -2
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
H GFL T+MTESP RNILLMN SL TGRAFF P PV G SVHIS TFS TMLQ SKA T
Sbjct: 412 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISMTFSRTMLQCLSKALT 233
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
RP SFLLLRQL+ T VLFLTLII+T+ GPVLN
Sbjct: 232 RPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 137
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9
Length = 110257
Score = 143 bits (306), Expect(2) = 1e-053
Identities = 57/61 (93%), Positives = 60/61 (98%)
Frame = +1 / -2
Query: 199 GKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTE 378
GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTE
Sbjct: 89085 GKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTE 88906
Query: 379 I 381
+
Sbjct: 88905 V 88903
Score = 89.5 bits (189), Expect(2) = 1e-053
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1 / -3
Query: 379 IPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 88817 VPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 88701
Score = 88.1 bits (186), Expect(2) = 7e-032
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = -3 / +2
Query: 377 SVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
SVHIS TFS TMLQ SKA TRP SFLLLRQL+ T VLFLTLII+T+ GPVLN
Sbjct: 88907 SVHISLTFSRTMLQCLSKALTRPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 89065
Score = 71.6 bits (150), Expect(2) = 7e-032
Identities = 31/46 (67%), Positives = 32/46 (69%)
Frame = -3 / +1
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRT 357
H GFL T+MTESP RNILLMN SL TGRAFF P PV G RT
Sbjct: 88702 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGT*KKTQRT 88839
>gb|BP613407.1|BP613407 BP613407 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-93-A15 3',
mRNA sequence
Length = 514
Score = 173 bits (372), Expect(2) = 2e-053
Identities = 70/73 (95%), Positives = 73/73 (100%)
Frame = +1 / -3
Query: 277 LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMFLR 456
LINCRNN+KLLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DRFISKMFLR
Sbjct: 410 LINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLR 231
Query: 457 GDSVIIVLRNPK* 495
GDSVIIVLRNPK*
Sbjct: 230 GDSVIIVLRNPK* 192
Score = 123 bits (263), Expect(2) = 1e-031
Identities = 55/72 (76%), Positives = 57/72 (79%)
Frame = -3 / +1
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
H GFL T+MTESP RNILLMN SL TGRAFF P PV G SVHIS TFS TMLQ SKA T
Sbjct: 193 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 372
Query: 314 RPSSFLLLRQLM 279
RP SFLLLRQL+
Sbjct: 373 RPRSFLLLRQLI 408
Score = 58.3 bits (121), Expect(2) = 2e-053
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1 / -2
Query: 199 GKKEEEEFSTGPLSVLMMSVKNNTQVL 279
GK EEEEF+TGPLSVLMMSVKNNTQV+
Sbjct: 489 GKTEEEEFNTGPLSVLMMSVKNNTQVV 409
Score = 35.4 bits (71), Expect(2) = 1e-031
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3 / +2
Query: 275 TWVLFLTLIIRTDRGPVLN 219
T VLFLTLII+T+ GPVLN
Sbjct: 413 T*VLFLTLIIKTESGPVLN 469
>gb|BP864880.1|BP864880 BP864880 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-72-C14 5',
mRNA sequence
Length = 390
Score = 207 bits (447), Expect = 3e-052
Identities = 83/95 (87%), Positives = 90/95 (94%)
Frame = +1 / +3
Query: 178 MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 357
M ++ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 105 MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 284
Query: 358 VREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGD 462
VREMWTE+PKTGKGK+KALPVN+DRFISKMFLRGD
Sbjct: 285 VREMWTEVPKTGKGKEKALPVNRDRFISKMFLRGD 389
Score = 132 bits (282), Expect = 2e-029
Identities = 61/81 (75%), Positives = 64/81 (79%)
Frame = -3 / -3
Query: 461 SPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKARTRPSSFLLLRQL 282
SP RNILLMN SL TGRAF P PV G SVHIS TFS TMLQ SKA TRP SFLLLRQL
Sbjct: 388 SPRRNILLMNRSLLTGRAFSFPFPVFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQL 209
Query: 281 MRTWVLFLTLIIRTDRGPVLN 219
+ T VLFLTLII+T+ GPVLN
Sbjct: 208 INT*VLFLTLIIKTESGPVLN 146
>gb|AU226468.1|AU226468 AU226468 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-35-O15 3',
mRNA sequence
Length = 425
Score = 204 bits (441), Expect = 2e-051
Identities = 84/88 (95%), Positives = 88/88 (100%)
Frame = +1 / -2
Query: 232 PLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKA 411
PLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKA
Sbjct: 424 PLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 245
Query: 412 LPVNKDRFISKMFLRGDSVIIVLRNPK* 495
LP+N+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 244 LPLNRDRFISKMFLRGDSVIIVLRNPK* 161
Score = 148 bits (318), Expect = 2e-034
Identities = 67/88 (76%), Positives = 71/88 (80%)
Frame = -3 / +3
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
HFGFL T+MTESP RNILLMN SLF G AFFLP PVLG SVHIS TFS TMLQ S A T
Sbjct: 162 HFGFLRTIMTESPRRNILLMNRSLFNGSAFFLPFPVLGTSVHISLTFSRTMLQCLSNALT 341
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRG 231
RP SFLL RQL++T VLFLTLIIRT+ G
Sbjct: 342 RPRSFLLFRQLIKT*VLFLTLIIRTESG 425
>gb|BP571612.1|BP571612 BP571612 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-76-O18 3',
mRNA sequence
Length = 451
Score = 203 bits (437), Expect = 7e-051
Identities = 83/88 (94%), Positives = 88/88 (100%)
Frame = +1 / -2
Query: 232 PLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKA 411
PLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVRE+WTE+PKTGKGKKKA
Sbjct: 429 PLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREIWTEVPKTGKGKKKA 250
Query: 412 LPVNKDRFISKMFLRGDSVIIVLRNPK* 495
LPVN+DRFI+KMFLRGDSVIIVLRNPK*
Sbjct: 249 LPVNRDRFITKMFLRGDSVIIVLRNPK* 166
Score = 144 bits (308), Expect = 4e-033
Identities = 65/88 (73%), Positives = 70/88 (79%)
Frame = -3 / +2
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
HFGFL T+MTESP RNIL+MN SLFTG AFFLP PV G SV IS TFS TMLQ S A T
Sbjct: 167 HFGFLRTIMTESPRRNILVMNRSLFTGSAFFLPFPVFGTSVQISLTFSRTMLQCLSNALT 346
Query: 314 RPSSFLLLRQLMRTWVLFLTLIIRTDRG 231
RP SFLL RQL++T VLFLTLIIRT+ G
Sbjct: 347 RPRSFLLFRQLIKT*VLFLTLIIRTESG 430
>gb|BP866835.1|BP866835 BP866835 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-79-B01 5',
mRNA sequence
Length = 381
Score = 203 bits (437), Expect = 7e-051
Identities = 82/91 (90%), Positives = 88/91 (96%)
Frame = +1 / +2
Query: 184 DENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVR 363
+E+ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVR
Sbjct: 107 EEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVR 286
Query: 364 EMWTEIPKTGKGKKKALPVNKDRFISKMFLR 456
EMWTE+PKTGKGKKKALPVN+DRFISKMFLR
Sbjct: 287 EMWTEVPKTGKGKKKALPVNRDRFISKMFLR 379
Score = 133 bits (286), Expect = 4e-030
Identities = 61/80 (76%), Positives = 64/80 (80%)
Frame = -3 / -1
Query: 458 PLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKARTRPSSFLLLRQLM 279
P RNILLMN SL TGRAFF P PV G SVHIS TFS TMLQ SKA TRP SFLLLRQL+
Sbjct: 381 PRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQLI 202
Query: 278 RTWVLFLTLIIRTDRGPVLN 219
T VLFLTLII+T+ GPVLN
Sbjct: 201 NT*VLFLTLIIKTESGPVLN 142
>gb|BP821598.1|BP821598 BP821598 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-58-J16 5',
mRNA sequence
Length = 398
Score = 191 bits (412), Expect = 2e-047
Identities = 78/99 (78%), Positives = 87/99 (87%)
Frame = +1 / +1
Query: 178 MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 357
M ++ GK EEEEF+TGPLSVLMMSVKNNTQVLINCR N+KLLGRVRAFDRHCNMVLEN
Sbjct: 100 MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRKNRKLLGRVRAFDRHCNMVLEN 279
Query: 358 VREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVII 474
VREMWTE+ K GK ++K +N+DRFISKMFLRGDSVII
Sbjct: 280 VREMWTEVRKLGKARRKHFRLNRDRFISKMFLRGDSVII 396
Score = 122 bits (261), Expect = 1e-026
Identities = 57/85 (67%), Positives = 63/85 (74%)
Frame = -3 / -1
Query: 473 MMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKARTRPSSFLL 294
+MTESP RNILLMN SLF+ + F L P SVHIS TFS TMLQ S A TRP SFL
Sbjct: 395 IMTESPRRNILLMNRSLFSRKCFLLAFPSFRTSVHISLTFSRTMLQCLSNALTRPRSFLF 216
Query: 293 LRQLMRTWVLFLTLIIRTDRGPVLN 219
RQL++T VLFLTLIIRT+ GPVLN
Sbjct: 215 FRQLIKT*VLFLTLIIRTESGPVLN 141
>gb|AV819279.1|AV819279 AV819279 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-03-H06 3',
mRNA sequence
Length = 435
Score = 191 bits (411), Expect = 3e-047
Identities = 78/81 (96%), Positives = 81/81 (100%)
Frame = +1 / -2
Query: 253 SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDR 432
SVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DR
Sbjct: 434 SVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDR 255
Query: 433 FISKMFLRGDSVIIVLRNPK* 495
FISKMFLRGDSVIIVLRNPK*
Sbjct: 254 FISKMFLRGDSVIIVLRNPK* 192
Score = 136 bits (291), Expect = 9e-031
Identities = 62/81 (76%), Positives = 64/81 (79%)
Frame = -3 / +1
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
H GFL T+MTESP RNILLMN SL TGRAFF P PV G SVHIS TFS TMLQ SKA T
Sbjct: 193 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 372
Query: 314 RPSSFLLLRQLMRTWVLFLTL 252
RP SFLLLRQL+ T VLFLTL
Sbjct: 373 RPRSFLLLRQLINT*VLFLTL 435
>gb|BP815339.1|BP815339 BP815339 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-38-I16 5',
mRNA sequence
Length = 391
Score = 172 bits (370), Expect(2) = 3e-047
Identities = 69/79 (87%), Positives = 74/79 (93%)
Frame = +1 / +3
Query: 178 MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 357
M ++ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 102 MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 281
Query: 358 VREMWTEIPKTGKGKKKAL 414
VREMWTE+PKTGKGKKKAL
Sbjct: 282 VREMWTEVPKTGKGKKKAL 338
Score = 108 bits (230), Expect(2) = 2e-025
Identities = 49/65 (75%), Positives = 52/65 (80%)
Frame = -3 / -1
Query: 413 RAFFLPLPVLGISVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVLFLTLIIRTDR 234
RAFF P PV G SVHIS TFS TMLQ SKA TRP SFLLLRQL+ T VLFLTLII+T+
Sbjct: 337 RAFFFPFPVFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQLINT*VLFLTLIIKTES 158
Query: 233 GPVLN 219
GPVLN
Sbjct: 157 GPVLN 143
Score = 38.6 bits (78), Expect(2) = 3e-047
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +1 / +2
Query: 394 KGKKKALPVNKDRFISKMFLRGDSV 468
K K+++ VN+D FI KMFLRGDSV
Sbjct: 317 KRKEESSSVNRDGFIRKMFLRGDSV 391
Score = 29.9 bits (59), Expect(2) = 2e-025
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3 / -2
Query: 467 TESPLRNILLMNLSLFT 417
TESP RNI LMN SL T
Sbjct: 390 TESPRRNIFLMNPSLLT 340
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete
sequence
Length = 98937
Score = 92.3 bits (195), Expect(3) = 4e-045
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +1 / -1
Query: 271 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEI 381
QVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTE+
Sbjct: 10515 QVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEV 10405
Score = 89.5 bits (189), Expect(3) = 4e-045
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1 / -2
Query: 379 IPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 10325 VPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 10209
Score = 75.8 bits (159), Expect(3) = 1e-024
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = -3 / +1
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLG 381
HFGFL T+MTESP RNILLMN SLFTG AFFLP PV G
Sbjct: 10210 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFG 10323
Score = 57.9 bits (120), Expect(3) = 4e-045
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1 / -3
Query: 199 GKKEEEEFSTGPLSVLMMSVKNNTQV 276
GK EEEEF+TGPLSVLMMSVKNNTQV
Sbjct: 10777 GKTEEEEFNTGPLSVLMMSVKNNTQV 10700
Score = 57.4 bits (119), Expect(3) = 1e-024
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -3 / +2
Query: 389 VLGISVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRT 273
+L SVHIS TFS TMLQ S A TRP SFLL RQL++T
Sbjct: 10397 ILATSVHISLTFSRTMLQCLSNALTRPRSFLLFRQLIKT 10513
Score = 36.8 bits (74), Expect(3) = 1e-024
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / +3
Query: 275 TWVLFLTLIIRTDRGPVLN 219
T VLFLTLIIRT+ GPVLN
Sbjct: 10701 T*VLFLTLIIRTESGPVLN 10757
>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete
sequence
Length = 106355
Score = 92.3 bits (195), Expect(3) = 5e-045
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +1 / +2
Query: 271 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEI 381
QVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTE+
Sbjct: 5561 QVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEV 5671
Score = 89.5 bits (189), Expect(3) = 5e-045
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1 / +3
Query: 379 IPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 5751 VPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 5867
Score = 75.8 bits (159), Expect(3) = 2e-024
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = -3 / -2
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLG 381
HFGFL T+MTESP RNILLMN SLFTG AFFLP PV G
Sbjct: 5866 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFG 5753
Score = 57.9 bits (120), Expect(3) = 5e-045
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1 / +1
Query: 199 GKKEEEEFSTGPLSVLMMSVKNNTQV 276
GK EEEEF+TGPLSVLMMSVKNNTQV
Sbjct: 5299 GKTEEEEFNTGPLSVLMMSVKNNTQV 5376
Score = 57.4 bits (119), Expect(3) = 2e-024
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -3 / -3
Query: 389 VLGISVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRT 273
+L SVHIS TFS TMLQ S A TRP SFLL RQL++T
Sbjct: 5679 ILATSVHISLTFSRTMLQCLSNALTRPRSFLLFRQLIKT 5563
Score = 36.8 bits (74), Expect(3) = 2e-024
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -1
Query: 275 TWVLFLTLIIRTDRGPVLN 219
T VLFLTLIIRT+ GPVLN
Sbjct: 5375 T*VLFLTLIIRTESGPVLN 5319
>gb|BP581041.1|BP581041 BP581041 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-30-D07 3',
mRNA sequence
Length = 467
Score = 116 bits (248), Expect(3) = 1e-042
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = +1 / -3
Query: 307 LGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGD 462
L + AFDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DRFISKMFLRG+
Sbjct: 384 LAELGAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGE 229
Score = 80.8 bits (170), Expect(3) = 2e-024
Identities = 37/54 (68%), Positives = 37/54 (68%)
Frame = -3 / +2
Query: 461 SPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKARTRPSSF 300
SP RNILLMN SL TGRAFF P PV G SVHIS TFS TMLQ SKA F
Sbjct: 230 SPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKAPNSAKEF 391
Score = 72.5 bits (152), Expect(3) = 1e-042
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +1 / -2
Query: 232 PLSVLMMSVKNNTQVLINCRNNKKLLGRVRAF 327
PLS+LMMSVKNNTQVLINCRNN+KLLGRVR F
Sbjct: 460 PLSILMMSVKNNTQVLINCRNNRKLLGRVRGF 365
Score = 48.3 bits (99), Expect(3) = 2e-024
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = -3 / +3
Query: 326 KARTRPSSFLLLRQLMRTWVLFLTLIIRTDRG 231
K TRP SFLLLRQL+ T VLFLTLII+ + G
Sbjct: 366 KPLTRPRSFLLLRQLINT*VLFLTLIIKIESG 461
Score = 24.9 bits (48), Expect(3) = 1e-042
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1 / -1
Query: 463 SVIIVLRNPK* 495
SVIIVLRNPK*
Sbjct: 227 SVIIVLRNPK* 195
Score = 23.1 bits (44), Expect(3) = 2e-024
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / +1
Query: 494 HFGFLSTMMTE 462
H GFL T+MTE
Sbjct: 196 HLGFLRTIMTE 228
>gb|BP851888.1|BP851888 BP851888 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-17-N19 5',
mRNA sequence
Length = 388
Score = 172 bits (370), Expect = 1e-041
Identities = 69/79 (87%), Positives = 74/79 (93%)
Frame = +1 / +2
Query: 178 MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 357
M ++ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 125 MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 304
Query: 358 VREMWTEIPKTGKGKKKAL 414
VREMWTE+PKTGKGKKKAL
Sbjct: 305 VREMWTEVPKTGKGKKKAL 361
Score = 105 bits (225), Expect = 1e-021
Identities = 48/64 (75%), Positives = 51/64 (79%)
Frame = -3 / -2
Query: 410 AFFLPLPVLGISVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVLFLTLIIRTDRG 231
AFFLP PV G SVHIS TFS TMLQ S A TRP SFLL RQL++T VLFLTLIIRT+ G
Sbjct: 357 AFFLPFPVFGTSVHISLTFSRTMLQCLSNALTRPRSFLLFRQLIKT*VLFLTLIIRTESG 178
Query: 230 PVLN 219
PVLN
Sbjct: 177 PVLN 166
>gb|BP854615.1|BP854615 BP854615 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-23-N20 5',
mRNA sequence
Length = 371
Score = 172 bits (370), Expect = 1e-041
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1 / +1
Query: 199 GKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTE 378
GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTE
Sbjct: 148 GKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTE 327
Query: 379 IPKTGKGKKKALP 417
+PKTGKGKKKALP
Sbjct: 328 VPKTGKGKKKALP 366
Score = 111 bits (236), Expect = 3e-023
Identities = 50/66 (75%), Positives = 53/66 (80%)
Frame = -3 / -1
Query: 416 GRAFFLPLPVLGISVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVLFLTLIIRTD 237
GRAFF P PV G SVHIS TFS TMLQ SKA TRP SFLLLRQL+ T VLFLTLII+T+
Sbjct: 365 GRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQLINT*VLFLTLIIKTE 186
Query: 236 RGPVLN 219
GPVLN
Sbjct: 185 SGPVLN 168
>gb|AI999102.1|AI999102 701554462 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701554462, mRNA sequence
Length = 379
Score = 169 bits (364), Expect = 8e-041
Identities = 68/71 (95%), Positives = 71/71 (100%)
Frame = +1 / -1
Query: 283 NCRNNKKLLGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGD 462
NCRNN+KLLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGD
Sbjct: 379 NCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGD 200
Query: 463 SVIIVLRNPK* 495
SVIIVLRNPK*
Sbjct: 199 SVIIVLRNPK* 167
Score = 121 bits (258), Expect = 3e-026
Identities = 54/70 (77%), Positives = 55/70 (78%)
Frame = -3 / +3
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
H GFL T+MTESP RNILLMN SL TGRAFF P PV G SVHIS TFS TMLQ SKA T
Sbjct: 168 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 347
Query: 314 RPSSFLLLRQ 285
RP SFLLLRQ
Sbjct: 348 RPRSFLLLRQ 377
>gb|BP665200.1|BP665200 BP665200 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-15-H11 3',
mRNA sequence
Length = 408
Score = 94.1 bits (199), Expect(4) = 7e-040
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +1 / -1
Query: 298 KKLLGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKALP 417
+KLLGRVRAFDRH NMVLENVREMWTE+PKTGKGKKKALP
Sbjct: 288 QKLLGRVRAFDRHSNMVLENVREMWTEVPKTGKGKKKALP 169
Score = 61.6 bits (128), Expect(3) = 2e-022
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = -3 / +2
Query: 416 GRAFFLPLPVLGISVHISRTFSSTMLQWRSKARTRPSSF 300
G AFFLP PV G SVHIS TFS TML+ S A TRP SF
Sbjct: 170 GSAFFLPFPVFGTSVHISLTFSRTMLECLSNALTRPRSF 286
Score = 58.3 bits (121), Expect(4) = 7e-040
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +1 / -3
Query: 400 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
++++ VN+DRFISKMFLRGDSVII+LRNPK*
Sbjct: 187 QEESTSVNRDRFISKMFLRGDSVIILLRNPK* 92
Score = 50.6 bits (104), Expect(3) = 2e-022
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -3 / +3
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFT 417
HFGFL +MTESP RNILLMN SLFT
Sbjct: 93 HFGFLRRIMTESPRRNILLMNRSLFT 170
Score = 46.0 bits (94), Expect(4) = 7e-040
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1 / -3
Query: 193 QAGKKEEEEFSTGPLSVLMMSVKNNTQ 273
Q+G+ EF+TGPLSVLMMS+KNNTQ
Sbjct: 391 QSGQD*GREFNTGPLSVLMMSLKNNTQ 311
Score = 33.6 bits (67), Expect(3) = 2e-022
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -3 / +3
Query: 269 VLFLTLIIRTDRGPVLN 219
VLFL LIIRT+ GPVLN
Sbjct: 315 VLFLRLIIRTESGPVLN 365
Score = 24.0 bits (46), Expect(4) = 7e-040
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / -2
Query: 274 VLINCRNNKKLLG 312
VLIN RNN+ LG
Sbjct: 311 VLINSRNNRNFLG 273
>gb|BP858325.1|BP858325 BP858325 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-36-N11 5',
mRNA sequence
Length = 398
Score = 99.6 bits (211), Expect(3) = 6e-039
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +1 / +1
Query: 307 LGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRFISK 444
L + FDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DRFIS+
Sbjct: 232 LAELGPFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISQ 369
Score = 68.0 bits (142), Expect(3) = 6e-039
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +1 / +3
Query: 241 VLMMSVKNNTQVLINCRNNKKLLGRVRAF 327
VLMMSVKNNTQVLINCRNN+KLLGRVRAF
Sbjct: 165 VLMMSVKNNTQVLINCRNNRKLLGRVRAF 251
Score = 34.1 bits (68), Expect(3) = 6e-039
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1 / +2
Query: 184 DENQAGKKEEEEFSTGPLS 240
+E+ GK EEEEF+TGPLS
Sbjct: 107 EEDTNGKTEEEEFNTGPLS 163
>gb|BP869127.1|BP869127 BP869127 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-86-N16 5',
mRNA sequence
Length = 361
Score = 163 bits (350), Expect = 7e-039
Identities = 69/86 (80%), Positives = 74/86 (86%)
Frame = +1 / +1
Query: 184 DENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVR 363
+E+ GK EEEE TGPLSV MMSVKNNTQVLIN RN +KLLGRVRA DRH MVLENVR
Sbjct: 103 EEDTNGKTEEEELKTGPLSVWMMSVKNNTQVLINGRNKRKLLGRVRASDRHGKMVLENVR 282
Query: 364 EMWTEIPKTGKGKKKALPVNKDRFIS 441
EMWTE+PKTGKGK KALPVN+DRFIS
Sbjct: 283 EMWTEVPKTGKGKNKALPVNRDRFIS 360
Score = 108 bits (231), Expect = 2e-022
Identities = 50/74 (67%), Positives = 55/74 (74%)
Frame = -3 / -3
Query: 440 LMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVLF 261
LMN SL TGRA F P PV G SVHIS TFS T+L S+A TRP SFLLLR L+ T VLF
Sbjct: 359 LMNRSLLTGRALFFPFPVFGTSVHISLTFSRTILPCLSEALTRPRSFLLLRPLINT*VLF 180
Query: 260 LTLIIRTDRGPVLN 219
LTLII+T+ GPV N
Sbjct: 179 LTLIIQTESGPVFN 138
>gb|BP788381.1|BP788381 BP788381 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-33-J03 3',
mRNA sequence
Length = 403
Score = 162 bits (349), Expect = 9e-039
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +1 / -3
Query: 289 RNNKKLLGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSV 468
RNN+KLLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSV
Sbjct: 401 RNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSV 222
Query: 469 IIVLRNPK* 495
IIVLRNPK*
Sbjct: 221 IIVLRNPK* 195
Score = 118 bits (253), Expect = 2e-025
Identities = 53/69 (76%), Positives = 54/69 (78%)
Frame = -3 / +1
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
H GFL T+MTESP RNILLMN SL TGRAFF P PV G SVHIS TFS TMLQ SKA T
Sbjct: 196 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 375
Query: 314 RPSSFLLLR 288
RP SFLLLR
Sbjct: 376 RPRSFLLLR 402
>gb|BP831765.1|BP831765 BP831765 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-90-C10 5',
mRNA sequence
Length = 364
Score = 159 bits (341), Expect = 1e-037
Identities = 64/91 (70%), Positives = 76/91 (83%)
Frame = +1 / +2
Query: 139 RLATGAEKEGGGSMADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRV 318
R+++ + M ++ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRV
Sbjct: 65 RISSSLQVNMSKPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRV 244
Query: 319 RAFDRHCNMVLENVREMWTEIPKTGKGKKKA 411
RAFDRHCNMVLENVREMWTE+PKT K K+++
Sbjct: 245 RAFDRHCNMVLENVREMWTEVPKTRKRKEES 337
Score = 92.3 bits (195), Expect(2) = 3e-021
Identities = 43/57 (75%), Positives = 46/57 (80%)
Frame = -3 / -2
Query: 389 VLGISVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
V G SVHIS TFS TMLQ SKA TRP SFLLLRQL+ T VLFLTLII+T+ GPVLN
Sbjct: 315 VFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 145
Score = 31.8 bits (63), Expect(2) = 3e-021
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -3 / -1
Query: 437 MNLSLFTGRAFFLPLP 390
MN SL TGRAFF P P
Sbjct: 364 MNRSLLTGRAFFFPFP 317
>gb|BP621376.1|BP621376 BP621376 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-41-B20 3',
mRNA sequence
Length = 426
Score = 158 bits (339), Expect = 2e-037
Identities = 68/88 (77%), Positives = 74/88 (84%)
Frame = +1 / -3
Query: 271 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMF 450
+VLIN NN+KLLGRVRAFDRH NMVLENVREMWTE+PKTGKGKKKALPVN+DRFISKMF
Sbjct: 415 RVLINSPNNRKLLGRVRAFDRHSNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMF 236
Query: 451 LRGDSVIIVLRNPK*SPNQSPCSSYALS 534
LRGDSVIIVLR P + S + LS
Sbjct: 235 LRGDSVIIVLRTPSERSSSYDNSRFFLS 152
Score = 112 bits (240), Expect = 1e-023
Identities = 51/72 (70%), Positives = 55/72 (76%)
Frame = -3 / +3
Query: 488 GFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKARTRP 309
G L T+MTESP RNILLMN SL TGRAFF P PV G SVHIS TFS TML+ SKA TRP
Sbjct: 198 GVLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLECLSKALTRP 377
Query: 308 SSFLLLRQLMRT 273
SFLLL +L+ T
Sbjct: 378 RSFLLLGELINT 413
>gb|H36625.1|H36625 14293 Lambda-PRL2 Arabidopsis thaliana cDNA clone 175N1T7, mRNA
sequence
Length = 450
Score = 151 bits (324), Expect(2) = 6e-036
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = +1 / +2
Query: 184 DENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVR 363
+E+ GK EEEEF+TGPLSV MMSVKNNTQVLINCRNN+KLLGRVRAF RHCNMVLEN R
Sbjct: 125 EEDTNGKTEEEEFNTGPLSVXMMSVKNNTQVLINCRNNRKLLGRVRAFXRHCNMVLENXR 304
Query: 364 EMWTEIPKTGKGKKK 408
MWTE+PKTGKG ++
Sbjct: 305 XMWTEVPKTGKGXER 349
Score = 22.1 bits (42), Expect(2) = 6e-036
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 400 KKKALPVNKDRFISK 444
++K N+DRFISK
Sbjct: 344 ERKXFLFNRDRFISK 388
>gb|BP851641.1|BP851641 BP851641 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-17-B11 5',
mRNA sequence
Length = 396
Score = 109 bits (232), Expect(2) = 1e-035
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +1 / +3
Query: 280 INCRNNKKLLGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKAL 414
+NCRNN+KLLGRVRAFDRHCNMVLENVREMWTE+PKTGKG KKAL
Sbjct: 228 LNCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGNKKAL 362
Score = 62.9 bits (131), Expect(2) = 1e-035
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +1 / +2
Query: 178 MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVL 279
M ++ GK EEEEF+TGPLSVLMMSVKNNTQVL
Sbjct: 125 MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVL 226
>gb|BP636278.1|BP636278 BP636278 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-03-P22 3',
mRNA sequence
Length = 469
Score = 83.1 bits (175), Expect(3) = 2e-035
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +1 / -3
Query: 385 KTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
+TGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 350 ETGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 240
Score = 64.8 bits (135), Expect(3) = 2e-035
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +1 / -1
Query: 307 LGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKK 408
L + AFDRHCNMVLENVREMWTE+PK K ++K
Sbjct: 427 LAELGAFDRHCNMVLENVREMWTEVPKPEKERRK 326
Score = 41.8 bits (85), Expect(3) = 2e-035
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1 / -3
Query: 268 TQVLINCRNNKKLLGRVRAF 327
TQ LINCRNN KLLGRVR F
Sbjct: 467 TQWLINCRNNTKLLGRVRGF 408
>gb|AV549536.1|AV549536 AV549536 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09a07R 5', mRNA sequence
Length = 352
Score = 149 bits (321), Expect = 7e-035
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +1 / +1
Query: 307 LGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN 486
LGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRN
Sbjct: 1 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRN 180
Query: 487 PK* 495
PK*
Sbjct: 181 PK* 189
Score = 109 bits (232), Expect = 1e-022
Identities = 48/62 (77%), Positives = 49/62 (79%)
Frame = -3 / -3
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKART 315
HFGFL T+MTESP RNILLMN SLFTG AFFLP PV G SVHIS TFS TMLQ S A T
Sbjct: 188 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 9
Query: 314 RP 309
RP
Sbjct: 8 RP 3
>gb|BP867804.1|BP867804 BP867804 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-82-E04 5',
mRNA sequence
Length = 377
Score = 149 bits (321), Expect = 7e-035
Identities = 58/77 (75%), Positives = 68/77 (88%)
Frame = +1 / +1
Query: 178 MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 357
M ++ GK EEEEF+TGPLSV+MMSVKNNT+VLINCR N+KLLGRVRA DRHC+MV E
Sbjct: 121 MEEDTNQGKTEEEEFNTGPLSVIMMSVKNNTKVLINCRKNRKLLGRVRASDRHCHMVFET 300
Query: 358 VREMWTEIPKTGKGKKK 408
VREMWTE+PKTGKG++K
Sbjct: 301 VREMWTEVPKTGKGRRK 351
>gb|AV832022.1|AV832022 AV832022 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-01-A19 5',
mRNA sequence
Length = 547
Score = 138 bits (297), Expect(3) = 9e-035
Identities = 56/58 (96%), Positives = 58/58 (100%)
Frame = +1 / +2
Query: 322 AFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
AFDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 254 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 427
Score = 100 bits (212), Expect(2) = 2e-032
Identities = 44/58 (75%), Positives = 45/58 (77%)
Frame = -3 / -2
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKA 321
H GFL T+MTESP RNILLMN SL TGRAFF P PV G SVHIS TFS TMLQ SKA
Sbjct: 426 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKA 253
Score = 96.4 bits (204), Expect(2) = 2e-021
Identities = 43/77 (55%), Positives = 51/77 (66%)
Frame = +1 / +3
Query: 178 MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 357
M ++ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVR L+
Sbjct: 111 MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRLLTGTATWFLKM 290
Query: 358 VREMWTEIPKTGKGKKK 408
+ K K ++K
Sbjct: 291 SEKCGLRFRKPEKERRK 341
Score = 61.6 bits (128), Expect(2) = 2e-032
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -3 / -1
Query: 326 KARTRPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
K+ TRP SFLLLRQL+ T VLFLTLII+T+ GPVLN
Sbjct: 259 KSLTRPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 152
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / +3
Query: 428 IDSSVRCSSGATRSS*C*GTRSDRPTSH 511
IDSS RCS T+S GT S+R +S+
Sbjct: 360 IDSSARCSCVETQSLSSSGTPSERSSSY 443
Score = 24.9 bits (48), Expect(3) = 9e-035
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3 / +2
Query: 201 KERGGGI*HRPSVSPNDEC*E 263
K+ GGG+ H ++ +DEC*E
Sbjct: 134 KD*GGGVQHWTTLCFDDEC*E 196
Score = 23.5 bits (45), Expect(3) = 9e-035
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 245 ***VLRTTPRSSSIAATTRSCLA 313
***VLR T R SIA TT + LA
Sbjct: 178 ***VLRITLRC*SIAVTTGNSLA 246
>gb|AY042797.1| Arabidopsis thaliana small nuclear ribonucleoprotein-like protein
(F26K9.270) mRNA, complete cds
Length = 541
Score = 138 bits (297), Expect(3) = 9e-035
Identities = 56/58 (96%), Positives = 58/58 (100%)
Frame = +1 / +1
Query: 322 AFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
AFDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 256 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 429
Score = 100 bits (212), Expect(2) = 2e-032
Identities = 44/58 (75%), Positives = 45/58 (77%)
Frame = -3 / -3
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKA 321
H GFL T+MTESP RNILLMN SL TGRAFF P PV G SVHIS TFS TMLQ SKA
Sbjct: 428 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKA 255
Score = 96.4 bits (204), Expect(2) = 2e-021
Identities = 43/77 (55%), Positives = 51/77 (66%)
Frame = +1 / +2
Query: 178 MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 357
M ++ GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVR L+
Sbjct: 113 MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRLLTGTATWFLKM 292
Query: 358 VREMWTEIPKTGKGKKK 408
+ K K ++K
Sbjct: 293 SEKCGLRFRKPEKERRK 343
Score = 61.6 bits (128), Expect(2) = 2e-032
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -3 / -2
Query: 326 KARTRPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
K+ TRP SFLLLRQL+ T VLFLTLII+T+ GPVLN
Sbjct: 261 KSLTRPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 154
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / +2
Query: 428 IDSSVRCSSGATRSS*C*GTRSDRPTSH 511
IDSS RCS T+S GT S+R +S+
Sbjct: 362 IDSSARCSCVETQSLSSSGTPSERSSSY 445
Score = 24.9 bits (48), Expect(3) = 9e-035
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3 / +1
Query: 201 KERGGGI*HRPSVSPNDEC*E 263
K+ GGG+ H ++ +DEC*E
Sbjct: 136 KD*GGGVQHWTTLCFDDEC*E 198
Score = 23.5 bits (45), Expect(3) = 9e-035
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 245 ***VLRTTPRSSSIAATTRSCLA 313
***VLR T R SIA TT + LA
Sbjct: 180 ***VLRITLRC*SIAVTTGNSLA 248
>gb|AV818857.1|AV818857 AV818857 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-01-A19 3',
mRNA sequence
Length = 412
Score = 138 bits (297), Expect(3) = 9e-035
Identities = 56/58 (96%), Positives = 58/58 (100%)
Frame = +1 / -1
Query: 322 AFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
AFDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 286 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 113
Score = 100 bits (212), Expect(2) = 2e-032
Identities = 44/58 (75%), Positives = 45/58 (77%)
Frame = -3 / +3
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGISVHISRTFSSTMLQWRSKA 321
H GFL T+MTESP RNILLMN SL TGRAFF P PV G SVHIS TFS TMLQ SKA
Sbjct: 114 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKA 287
Score = 61.6 bits (128), Expect(2) = 2e-032
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -3 / +2
Query: 326 KARTRPSSFLLLRQLMRTWVLFLTLIIRTDRGPVLN 219
K+ TRP SFLLLRQL+ T VLFLTLII+T+ GPVLN
Sbjct: 281 KSLTRPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 388
Score = 24.9 bits (48), Expect(3) = 9e-035
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3 / -1
Query: 201 KERGGGI*HRPSVSPNDEC*E 263
K+ GGG+ H ++ +DEC*E
Sbjct: 406 KD*GGGVQHWTTLCFDDEC*E 344
Score = 23.5 bits (45), Expect(3) = 9e-035
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +2 / -3
Query: 245 ***VLRTTPRSSSIAATTRSCLA 313
***VLR T R SIA TT + LA
Sbjct: 362 ***VLRITLRC*SIAVTTGNSLA 294
>gb|BP650469.1|BP650469 BP650469 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-84-H22 3',
mRNA sequence
Length = 410
Score = 94.5 bits (200), Expect(2) = 2e-034
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +1 / -1
Query: 277 LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKA 411
LINC NN+KLLGRVRAFDRHCNMVLENVREMWTE+PKT K ++ +
Sbjct: 410 LINCLNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTEKKEESS 276
Score = 73.9 bits (155), Expect(2) = 2e-034
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +1 / -2
Query: 394 KGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
K KKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 295 KRKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 194
>gb|BP844944.1|BP844944 BP844944 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-92-A02 5',
mRNA sequence
Length = 383
Score = 112 bits (240), Expect(2) = 3e-034
Identities = 44/53 (83%), Positives = 47/53 (88%)
Frame = +1 / +1
Query: 277 LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRF 435
LINCR N+KL GRVRAFDRHCNMVLENVREMW E+ KTGKG KKAL VN+DRF
Sbjct: 223 LINCRKNRKLFGRVRAFDRHCNMVLENVREMWPEVRKTGKGTKKALAVNRDRF 381
Score = 54.7 bits (113), Expect(2) = 3e-034
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +1 / +2
Query: 184 DENQAGKKEEEEFSTGPLSVLMMSVKNNTQV 276
+E+ GK EEEE +TGPLSV MMSVKNNTQV
Sbjct: 131 EEDTNGKTEEEESNTGPLSVFMMSVKNNTQV 223
>gb|AV820625.1|AV820625 AV820625 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-11-H04 3',
mRNA sequence
Length = 404
Score = 122 bits (261), Expect(2) = 5e-034
Identities = 54/75 (72%), Positives = 59/75 (78%)
Frame = +1 / -2
Query: 271 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMF 450
QVLINCRN+ KLLGRVR L+ + E+PKTGKGKKKALPVN+DRFISKMF
Sbjct: 337 QVLINCRNDTKLLGRVRLLTGTATWFLKMSEKCGAEVPKTGKGKKKALPVNRDRFISKMF 158
Query: 451 LRGDSVIIVLRNPK* 495
LRGDSVIIVLRNPK*
Sbjct: 157 LRGDSVIIVLRNPK* 113
Score = 72.5 bits (152), Expect(4) = 9e-023
Identities = 30/40 (75%), Positives = 31/40 (77%)
Frame = -3 / +3
Query: 494 HFGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGIS 375
H GFL T+MTESP RNILLMN SL TGRAFF P PV G S
Sbjct: 114 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTS 233
Score = 44.6 bits (91), Expect(2) = 5e-034
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / -1
Query: 214 EEFSTGPLSVLMMSVKNNT 270
EEF+TGPLSVLMMSVKNNT
Sbjct: 395 EEFNTGPLSVLMMSVKNNT 339
Score = 35.0 bits (70), Expect(4) = 9e-023
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3 / +1
Query: 269 VLFLTLIIRTDRGPVLN 219
VLFLTLII+T+ GPVLN
Sbjct: 340 VLFLTLIIKTESGPVLN 390
Score = 29.0 bits (57), Expect(4) = 9e-023
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / +1
Query: 374 VHISRTFSSTMLQWRSKA 321
+HIS TFS TMLQ SKA
Sbjct: 235 LHISLTFSRTMLQCLSKA 288
Score = 27.2 bits (53), Expect(4) = 9e-023
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3 / +3
Query: 326 KARTRPSSFLLLRQLMRT 273
K+ TRP SF+ LRQL+ T
Sbjct: 282 KSLTRPRSFVSLRQLINT 335
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 143 bits (306), Expect = 8e-033
Identities = 57/61 (93%), Positives = 60/61 (98%)
Frame = +1 / -3
Query: 199 GKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTE 378
GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTE
Sbjct: 23179342 GKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTE 23179163
Query: 379 I 381
+
Sbjct: 23179162 V 23179160
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 143 bits (306), Expect = 8e-033
Identities = 57/61 (93%), Positives = 60/61 (98%)
Frame = +1 / -1
Query: 199 GKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTE 378
GK EEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTE
Sbjct: 23247086 GKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTE 23246907
Query: 379 I 381
+
Sbjct: 23246906 V 23246904
>gb|BP623210.1|BP623210 BP623210 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-05-P16 3',
mRNA sequence
Length = 368
Score = 138 bits (297), Expect = 1e-031
Identities = 56/58 (96%), Positives = 58/58 (100%)
Frame = +1 / -2
Query: 322 AFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 495
AFDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 367 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 194
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,439,598,384
Number of Sequences: 1013581
Number of extensions: 19147424
Number of successful extensions: 149251
Number of sequences better than 1.0e-020: 65
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 46535533506
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)