BLAST Search Results

TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 131543.2.11
         (514 letters)

Database: At_nucl_with_EST.fasta 
           1,013,581 sequences; 908,940,872 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BP590939.1|BP590939  BP590939 RAFL15 Arabidopsis thaliana...   109   8e-023
gb|BP812426.1|BP812426  BP812426 RAFL19 Arabidopsis thaliana...   108   1e-022
gb|BP850536.1|BP850536  BP850536 RAFL21 Arabidopsis thaliana...   108   1e-022
gb|AI996189.1|AI996189  701550514 A. thaliana, Columbia Col-...   107   2e-022
gb|AV787917.1|AV787917  AV787917 RAFL6 Arabidopsis thaliana ...   107   2e-022
gb|AV789685.1|AV789685  AV789685 RAFL6 Arabidopsis thaliana ...   107   2e-022
gb|AV790204.1|AV790204  AV790204 RAFL6 Arabidopsis thaliana ...   107   2e-022
gb|BP567189.1|BP567189  BP567189 RAFL14 Arabidopsis thaliana...   107   2e-022
gb|BP570306.1|BP570306  BP570306 RAFL14 Arabidopsis thaliana...   107   2e-022
gb|BP573892.1|BP573892  BP573892 RAFL14 Arabidopsis thaliana...   107   2e-022
gb|BP584403.1|BP584403  BP584403 RAFL14 Arabidopsis thaliana...   107   2e-022
gb|BP594318.1|BP594318  BP594318 RAFL15 Arabidopsis thaliana...   107   2e-022
gb|BP627061.1|BP627061  BP627061 RAFL17 Arabidopsis thaliana...   107   2e-022
gb|BP793485.1|BP793485  BP793485 RAFL7 Arabidopsis thaliana ...   107   2e-022
gb|BP794770.1|BP794770  BP794770 RAFL7 Arabidopsis thaliana ...   107   2e-022
gb|BP798064.1|BP798064  BP798064 RAFL14 Arabidopsis thaliana...   107   2e-022
gb|BP823891.1|BP823891  BP823891 RAFL19 Arabidopsis thaliana...   107   2e-022
gb|BP860269.1|BP860269  BP860269 RAFL21 Arabidopsis thaliana...   107   2e-022
ref|NM_111550.2|  Arabidopsis thaliana structural constituen...   107   2e-022
gb|BP573487.1|BP573487  BP573487 RAFL14 Arabidopsis thaliana...   107   3e-022
gb|BP565017.1|BP565017  BP565017 RAFL14 Arabidopsis thaliana...   106   4e-022
gb|BP624148.1|BP624148  BP624148 RAFL17 Arabidopsis thaliana...   106   4e-022
gb|BP670437.1|BP670437  BP670437 RAFL21 Arabidopsis thaliana...   106   5e-022
gb|BP859109.1|BP859109  BP859109 RAFL21 Arabidopsis thaliana...   105   7e-022
gb|BP624094.1|BP624094  BP624094 RAFL17 Arabidopsis thaliana...   105   1e-021
gb|BP624538.1|BP624538  BP624538 RAFL17 Arabidopsis thaliana...   105   1e-021
gb|BP628571.1|BP628571  BP628571 RAFL17 Arabidopsis thaliana...   105   1e-021
gb|BP659569.1|BP659569  BP659569 RAFL19 Arabidopsis thaliana...   105   1e-021
gb|BP827764.1|BP827764  BP827764 RAFL19 Arabidopsis thaliana...   105   1e-021
gb|AY087083.1|  Arabidopsis thaliana clone 315 mRNA, complet...   105   1e-021
emb|BX824272.1|CNS0A7RM  Arabidopsis thaliana Full-length cD...   105   1e-021
emb|BX826254.1|CNS0A7ON  Arabidopsis thaliana Full-length cD...   105   1e-021
ref|NM_111548.2|  Arabidopsis thaliana structural constituen...   105   1e-021
ref|NM_001035573.1|  Arabidopsis thaliana structural constit...   105   1e-021
gb|BP578867.1|BP578867  BP578867 RAFL14 Arabidopsis thaliana...   105   1e-021
gb|BP566212.1|BP566212  BP566212 RAFL14 Arabidopsis thaliana...   104   2e-021
gb|BP801924.1|BP801924  BP801924 RAFL14 Arabidopsis thaliana...   104   3e-021
ref|NM_001035574.1|  Arabidopsis thaliana structural constit...   104   3e-021
gb|BP798665.1|BP798665  BP798665 RAFL14 Arabidopsis thaliana...   103   5e-021
gb|BP861973.1|BP861973  BP861973 RAFL21 Arabidopsis thaliana...   103   5e-021
gb|BP570914.1|BP570914  BP570914 RAFL14 Arabidopsis thaliana...   102   7e-021

>gb|BP590939.1|BP590939 BP590939 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-12-L02 3',
           mRNA sequence
          Length = 385

 Score =  109 bits (232), Expect = 8e-023
 Identities = 44/57 (77%), Positives = 48/57 (84%)
 Frame = +3 / -3

                                                                    
Query: 84  SRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           S +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 380 SSTSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 210



>gb|BP812426.1|BP812426 BP812426 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-03-F17 5',
           mRNA sequence
          Length = 403

 Score =  108 bits (231), Expect = 1e-022
 Identities = 44/59 (74%), Positives = 48/59 (81%)
 Frame = +3 / +2

                                                                      
Query: 78  RCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           R   +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 38  RVRSTSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 214



>gb|BP850536.1|BP850536 BP850536 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-13-D20 5',
           mRNA sequence
          Length = 388

 Score =  108 bits (230), Expect = 1e-022
 Identities = 43/60 (71%), Positives = 48/60 (80%)
 Frame = +3 / +2

                                                                       
Query: 75  IRCSRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +R   +SL    EMAKSKNHT HNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 38  VRARSTSLSQYSEMAKSKNHTGHNQSGKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 217



>gb|AI996189.1|AI996189 701550514 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
           thaliana cDNA clone 701550514, mRNA sequence
          Length = 378

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / -3

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 349 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 185



>gb|AV787917.1|AV787917 AV787917 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-77-H24 3',
           mRNA sequence
          Length = 415

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / -3

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 371 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 207



>gb|AV789685.1|AV789685 AV789685 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-84-J04 3',
           mRNA sequence
          Length = 408

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / -3

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 376 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 212



>gb|AV790204.1|AV790204 AV790204 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-87-H13 3',
           mRNA sequence
          Length = 411

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / -2

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 371 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 207



>gb|BP567189.1|BP567189 BP567189 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-57-B03 3',
           mRNA sequence
          Length = 394

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / -1

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 373 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 209



>gb|BP570306.1|BP570306 BP570306 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-72-C11 3',
           mRNA sequence
          Length = 430

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / -2

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 375 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 211



>gb|BP573892.1|BP573892 BP573892 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-85-P17 3',
           mRNA sequence
          Length = 394

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / -2

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 375 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 211



>gb|BP584403.1|BP584403 BP584403 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-46-C14 3',
           mRNA sequence
          Length = 425

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / -2

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 373 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 209



>gb|BP594318.1|BP594318 BP594318 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-25-H03 3',
           mRNA sequence
          Length = 448

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / -3

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 371 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 207



>gb|BP627061.1|BP627061 BP627061 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-49-M01 3',
           mRNA sequence
          Length = 420

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / -2

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 371 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 207



>gb|BP793485.1|BP793485 BP793485 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-56-H14 3',
           mRNA sequence
          Length = 410

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / -3

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 372 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 208



>gb|BP794770.1|BP794770 BP794770 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-61-P17 3',
           mRNA sequence
          Length = 409

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / -3

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 371 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 207



>gb|BP798064.1|BP798064 BP798064 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-05-N16 5',
           mRNA sequence
          Length = 389

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / +1

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 52  TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 216



>gb|BP823891.1|BP823891 BP823891 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-07-N21 5',
           mRNA sequence
          Length = 394

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / +1

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 49  TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 213



>gb|BP860269.1|BP860269 BP860269 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-43-J12 5',
           mRNA sequence
          Length = 378

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / +2

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 50  TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 214



>ref|NM_111550.2| Arabidopsis thaliana structural constituent of ribosome AT3G06700
           transcript variant AT3G06700.1 mRNA, complete cds
          Length = 427

 Score =  107 bits (229), Expect = 2e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / +2

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 53  TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 217



>gb|BP573487.1|BP573487 BP573487 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-84-H11 3',
           mRNA sequence
          Length = 403

 Score =  107 bits (228), Expect = 3e-022
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +3 / -3

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 371 TSLPQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 207



>gb|BP565017.1|BP565017 BP565017 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-10-H11 3',
           mRNA sequence
          Length = 428

 Score =  106 bits (227), Expect = 4e-022
 Identities = 43/56 (76%), Positives = 47/56 (83%)
 Frame = +3 / -3

                                                                   
Query: 84  SRSSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYS 251
           S +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+
Sbjct: 381 SSTSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYA 214



>gb|BP624148.1|BP624148 BP624148 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-39-C01 3',
           mRNA sequence
          Length = 424

 Score =  106 bits (227), Expect = 4e-022
 Identities = 43/55 (78%), Positives = 46/55 (83%)
 Frame = +3 / -2

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP RHR T T+GMDPKFLRN RY+R
Sbjct: 375 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPSRHRHTPTRGMDPKFLRNQRYAR 211



>gb|BP670437.1|BP670437 BP670437 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-35-C04 3',
           mRNA sequence
          Length = 434

 Score =  106 bits (226), Expect = 5e-022
 Identities = 43/55 (78%), Positives = 46/55 (83%)
 Frame = +3 / -3

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY R
Sbjct: 378 TSLSHYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYPR 214



>gb|BP859109.1|BP859109 BP859109 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-39-I18 5',
           mRNA sequence
          Length = 394

 Score =  105 bits (225), Expect = 7e-022
 Identities = 42/55 (76%), Positives = 46/55 (83%)
 Frame = +3 / +1

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHT HNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 52  TSLSQYSEMAKSKNHTVHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 216



>gb|BP624094.1|BP624094 BP624094 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-38-O20 3',
           mRNA sequence
          Length = 368

 Score =  105 bits (224), Expect = 1e-021
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = +3 / -2

                                                           
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 319 EMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 176



>gb|BP624538.1|BP624538 BP624538 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-40-J12 3',
           mRNA sequence
          Length = 428

 Score =  105 bits (224), Expect = 1e-021
 Identities = 42/55 (76%), Positives = 46/55 (83%)
 Frame = +3 / -3

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNH AHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 375 TSLSQYSEMAKSKNHAAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 211



>gb|BP628571.1|BP628571 BP628571 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-12-P09 3',
           mRNA sequence
          Length = 345

 Score =  105 bits (224), Expect = 1e-021
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = +3 / -2

                                                           
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 320 EMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 177



>gb|BP659569.1|BP659569 BP659569 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-39-P20 3',
           mRNA sequence
          Length = 402

 Score =  105 bits (224), Expect = 1e-021
 Identities = 42/54 (77%), Positives = 46/54 (85%)
 Frame = +3 / -1

                                                                 
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYS 251
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+
Sbjct: 375 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYA 214



>gb|BP827764.1|BP827764 BP827764 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-76-J11 5',
           mRNA sequence
          Length = 383

 Score =  105 bits (224), Expect = 1e-021
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = +3 / +3

                                                           
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 42  EMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 185



>gb|AY087083.1| Arabidopsis thaliana clone 315 mRNA, complete sequence
          Length = 421

 Score =  105 bits (224), Expect = 1e-021
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = +3 / +1

                                                           
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 73  EMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 216



>emb|BX824272.1|CNS0A7RM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH35ZD10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 360

 Score =  105 bits (224), Expect = 1e-021
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = +3 / +1

                                                           
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 31  EMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 174



>emb|BX826254.1|CNS0A7ON Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL94ZE11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 322

 Score =  105 bits (224), Expect = 1e-021
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = +3 / +3

                                                           
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 3   EMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 146



>ref|NM_111548.2| Arabidopsis thaliana structural constituent of ribosome AT3G06680
           mRNA, complete cds
          Length = 254

 Score =  105 bits (224), Expect = 1e-021
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = +3 / +3

                                                           
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 66  EMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 209



>ref|NM_001035573.1| Arabidopsis thaliana structural constituent of ribosome AT3G06700
           transcript variant AT3G06700.2 mRNA, complete cds
          Length = 405

 Score =  105 bits (224), Expect = 1e-021
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = +3 / +2

                                                           
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 53  EMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 196



>gb|BP578867.1|BP578867 BP578867 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-19-P18 3',
           mRNA sequence
          Length = 435

 Score =  105 bits (223), Expect = 1e-021
 Identities = 42/55 (76%), Positives = 46/55 (83%)
 Frame = +3 / -1

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHN S KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 375 TSLSQ*SEMAKSKNHTAHNHSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 211



>gb|BP566212.1|BP566212 BP566212 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-52-O20 3',
           mRNA sequence
          Length = 441

 Score =  104 bits (222), Expect = 2e-021
 Identities = 42/55 (76%), Positives = 46/55 (83%)
 Frame = +3 / -1

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KAHKNGIKKP+RH  T T+GMDPKFLRN RY+R
Sbjct: 375 TSLSQYSEMAKSKNHTAHNQSAKAHKNGIKKPRRHLHTPTRGMDPKFLRNQRYAR 211



>gb|BP801924.1|BP801924 BP801924 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-22-A01 5',
           mRNA sequence
          Length = 350

 Score =  104 bits (221), Expect = 3e-021
 Identities = 42/55 (76%), Positives = 46/55 (83%)
 Frame = +3 / +3

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKSKNHTAHNQS KA KNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 6   TSLSQYSEMAKSKNHTAHNQSAKAQKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 170



>ref|NM_001035574.1| Arabidopsis thaliana structural constituent of ribosome AT3G06700
           transcript variant AT3G06700.3 mRNA, complete cds
          Length = 400

 Score =  104 bits (221), Expect = 3e-021
 Identities = 40/48 (83%), Positives = 44/48 (91%)
 Frame = +3 / +3

                                                           
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +MAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 48  QMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 191



>gb|BP798665.1|BP798665 BP798665 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-08-A18 5',
           mRNA sequence
          Length = 397

 Score =  103 bits (219), Expect = 5e-021
 Identities = 40/47 (85%), Positives = 43/47 (91%)
 Frame = +3 / +2

                                                          
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYS 251
           EMAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+
Sbjct: 65  EMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYA 205



>gb|BP861973.1|BP861973 BP861973 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-49-H18 5',
           mRNA sequence
          Length = 403

 Score =  103 bits (219), Expect = 5e-021
 Identities = 40/48 (83%), Positives = 43/48 (89%)
 Frame = +3 / +3

                                                           
Query: 111 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           EMAKSKNHTAHNQS KAHKNGIKKP+RHR T  +GMDPKFLRN RY+R
Sbjct: 54  EMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPNRGMDPKFLRNQRYAR 197



>gb|BP570914.1|BP570914 BP570914 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-74-F01 3',
           mRNA sequence
          Length = 431

 Score =  102 bits (218), Expect = 7e-021
 Identities = 41/55 (74%), Positives = 45/55 (81%)
 Frame = +3 / -1

                                                                  
Query: 90  SSLRDPEEMAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 254
           +SL    EMAKS NH AHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 371 TSLSQYSEMAKSNNHPAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 207



  Database: At_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:09 PM
  Number of letters in database: 908,940,872
  Number of sequences in database:  1,013,581
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 980,674,761
Number of Sequences: 1013581
Number of extensions: 12306375
Number of successful extensions: 287112
Number of sequences better than 1.0e-020: 41
length of database: 302,980,290
effective HSP length: 54
effective length of database: 248,246,916
effective search space used: 28796642256
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)