TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.536
(819 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BP855931.1|BP855931 BP855931 RAFL21 Arabidopsis thaliana... 123 1e-047
gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F2... 102 9e-044
emb|AL096692.1|F17A13 Arabidopsis thaliana clone F17A13, **... 101 1e-042
ref|NM_001036297.1| Arabidopsis thaliana structural constit... 129 2e-042
ref|NM_127531.2| Arabidopsis thaliana structural constituen... 129 2e-042
emb|BX821549.1|CNS0A8EE Arabidopsis thaliana Full-length cD... 129 2e-042
emb|BX820934.1|CNS0A8QP Arabidopsis thaliana Full-length cD... 129 2e-042
gb|AV823405.1|AV823405 AV823405 RAFL5 Arabidopsis thaliana ... 129 2e-042
gb|CF652487.1|CF652487 58-L020526w-066-003-D16-SP6P MPIZ-AD... 129 2e-042
gb|AV784363.1|AV784363 AV784363 RAFL5 Arabidopsis thaliana ... 129 2e-042
gb|AY050769.1| Arabidopsis thaliana putative ribosomal prot... 129 2e-042
gb|CK120324.1|CK120324 207m05.p1 AtM1 Arabidopsis thaliana ... 129 2e-042
emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosom... 101 4e-042
emb|AL161575.2|ATCHRIV71 Arabidopsis thaliana DNA chromosom... 101 4e-042
gb|CF652479.1|CF652479 58-L020167-066-001-D16-SP6P MPIZ-ADI... 128 8e-042
gb|CB265133.1|CB265133 07-E014661-035-002-N02-T7R MPIZ-ADIS... 129 1e-041
gb|AY079378.1| Arabidopsis thaliana putative ribosomal prot... 127 1e-041
emb|AX506227.1| Sequence 922 from Patent WO0216655 127 1e-041
gb|BP863424.1|BP863424 BP863424 RAFL21 Arabidopsis thaliana... 123 2e-041
gb|BE038429.1|BE038429 AA17D06 AA Arabidopsis thaliana cDNA... 124 4e-041
ref|NM_119086.3| Arabidopsis thaliana structural constituen... 127 1e-040
emb|BX828625.1|CNS0A2F6 Arabidopsis thaliana Full-length cD... 127 1e-040
gb|AV822896.1|AV822896 AV822896 RAFL5 Arabidopsis thaliana ... 127 1e-040
emb|BX829363.1|CNS0A3JN Arabidopsis thaliana Full-length cD... 127 1e-040
gb|AY088304.1| Arabidopsis thaliana clone 5426 mRNA, comple... 127 1e-040
gb|AY072328.1| Arabidopsis thaliana putative protein (At4g2... 127 1e-040
gb|AV553363.1|AV553363 AV553363 Arabidopsis thaliana roots ... 127 1e-040
gb|AV553570.1|AV553570 AV553570 Arabidopsis thaliana roots ... 127 1e-040
gb|BP860079.1|BP860079 BP860079 RAFL21 Arabidopsis thaliana... 126 1e-040
gb|CF652803.1|CF652803 77-L020578-066-004-I20-SP6P MPIZ-ADI... 125 2e-039
gb|BT000047.1| Arabidopsis thaliana putative protein (At4g2... 124 3e-039
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 101 2e-038
gb|AV550092.1|AV550092 AV550092 Arabidopsis thaliana roots ... 125 1e-037
gb|BP842751.1|BP842751 BP842751 RAFL21 Arabidopsis thaliana... 123 9e-036
gb|AI995261.1|AI995261 701503270 A. thaliana, Ohio State cl... 129 2e-034
gb|BP796967.1|BP796967 BP796967 RAFL14 Arabidopsis thaliana... 126 2e-031
gb|T22823.1|T22823 4831 Lambda-PRL2 Arabidopsis thaliana cD... 134 3e-030
gb|AV531508.1|AV531508 AV531508 Arabidopsis thaliana flower... 109 1e-029
gb|AI999535.1|AI999535 701556327 A. thaliana, Columbia Col-... 108 8e-029
gb|AA042137.1|AA042137 24474 CD4-13 Arabidopsis thaliana cD... 129 1e-028
gb|BP814878.1|BP814878 BP814878 RAFL19 Arabidopsis thaliana... 126 8e-028
gb|BP597676.1|BP597676 BP597676 RAFL15 Arabidopsis thaliana... 125 2e-027
gb|BE529472.1|BE529472 M74D16STM Arabidopsis developing see... 125 2e-027
gb|AV544835.1|AV544835 AV544835 Arabidopsis thaliana roots ... 123 8e-027
gb|AV544976.1|AV544976 AV544976 Arabidopsis thaliana roots ... 123 8e-027
gb|BP856131.1|BP856131 BP856131 RAFL21 Arabidopsis thaliana... 111 9e-027
gb|AV819301.1|AV819301 AV819301 RAFL11 Arabidopsis thaliana... 122 1e-026
gb|AV564522.1|AV564522 AV564522 Arabidopsis thaliana green ... 122 1e-026
gb|H37001.1|H37001 15130 Lambda-PRL2 Arabidopsis thaliana c... 121 3e-026
gb|AV788181.1|AV788181 AV788181 RAFL6 Arabidopsis thaliana ... 121 3e-026
gb|BP647538.1|BP647538 BP647538 RAFL19 Arabidopsis thaliana... 121 3e-026
gb|T44307.1|T44307 7570 Lambda-PRL2 Arabidopsis thaliana cD... 120 5e-026
gb|AV534292.1|AV534292 AV534292 Arabidopsis thaliana flower... 119 1e-025
gb|BP865812.1|BP865812 BP865812 RAFL21 Arabidopsis thaliana... 117 3e-025
gb|AA712884.1|AA712884 32443 Lambda-PRL2 Arabidopsis thalia... 114 4e-024
gb|AV785568.1|AV785568 AV785568 RAFL6 Arabidopsis thaliana ... 90 3e-022
gb|AV801623.1|AV801623 AV801623 RAFL9 Arabidopsis thaliana ... 106 1e-021
gb|AV556012.1|AV556012 AV556012 Arabidopsis thaliana green ... 105 1e-021
>gb|BP855931.1|BP855931 BP855931 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-28-E24 5',
mRNA sequence
Length = 410
Score = 123 bits (263), Expect(2) = 1e-047
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = -2 / +3
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKK 567
++ EMATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SGLANKK
Sbjct: 27 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 206
Query: 566 TVTIQ 552
TVTIQ
Sbjct: 207 TVTIQ 221
Score = 89.5 bits (189), Expect(2) = 1e-047
Identities = 38/61 (62%), Positives = 46/61 (75%)
Frame = -2 / +1
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNY RPDL K+AL R
Sbjct: 226 AGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNY*RPDLKKAALAR 405
Query: 365 L 363
L
Sbjct: 406 L 408
Score = 87.2 bits (184), Expect(2) = 2e-027
Identities = 40/57 (70%), Positives = 44/57 (77%)
Frame = +1 / -2
Query: 556 IVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFLTICQIRSPGTV 726
+VTVFL AKPE L E L RLL SL+N TLALPLPNCFT+K+LF TI QI PGTV
Sbjct: 217 MVTVFLLAKPECLYELMLTRLLLSLLN*TLALPLPNCFTKKQLFLFTISQINCPGTV 47
Score = 57.9 bits (120), Expect(2) = 2e-027
Identities = 33/62 (53%), Positives = 35/62 (56%)
Frame = +1 / -1
Query: 361 LSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGVFCFLVLVVERTTAESF 540
LSL A +SGL**LS T T L IL NS DL G+FC LVLVV TT S
Sbjct: 410 LSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTESLGLFCLLVLVVPSTTPWSL 231
Query: 541 PA 546
PA
Sbjct: 230 PA 225
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete
sequence
Length = 126386
Score = 102 bits (217), Expect(3) = 9e-044
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = -2 / -2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSG 582
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SG
Sbjct: 111646 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSG 111494
Score = 72.1 bits (151), Expect(3) = 1e-023
Identities = 33/48 (68%), Positives = 36/48 (75%)
Frame = +1 / +3
Query: 583 PEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFLTICQIRSPGTV 726
PE L*E TL RLL SL+N TL PLPNCFT+K+L F TI QI PGTV
Sbjct: 111495 PECL*E*TLVRLLVSLLN*TLEFPLPNCFTKKQLLFFTISQINCPGTV 111638
Score = 71.2 bits (149), Expect(3) = 9e-044
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = -2 / -1
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYY 399
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV N+Y
Sbjct: 110993 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVLLNFY 110844
Score = 62.9 bits (131), Expect(3) = 9e-044
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = -2 / -1
Query: 416 VGDNYYRPDLTKSALGRLSSVYRSLQVAKSGVKKKNRQ 303
V DNYYRPDL K+AL RLS++ + L+VAKSG K++NRQ
Sbjct: 110519 VVDNYYRPDLKKAALARLSAISKGLRVAKSGAKQRNRQ 110406
Score = 52.8 bits (109), Expect(3) = 1e-023
Identities = 27/48 (56%), Positives = 28/48 (58%)
Frame = +1 / +1
Query: 406 LSPTWFFTALAILRNSLRITDLWLSFAGVFCFLVLVVERTTAESFPAA 549
LS TW TA IL NS DL G+FCFLVLVV TTA S AA
Sbjct: 110851 LSNTWLATAFDILGNSFLRIDLLTESLGLFCFLVLVVASTTAWSLSAA 110994
Score = 43.2 bits (88), Expect(3) = 1e-023
Identities = 24/42 (57%), Positives = 25/42 (59%)
Frame = +1 / +1
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFT 429
CLF L PDLAT R LSL A +SGL**LS T FT
Sbjct: 110407 CLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTT*TFT 110532
>emb|AL096692.1|F17A13 Arabidopsis thaliana clone F17A13, *** SEQUENCING IN PROGRESS ***
Length = 100310
Score = 101 bits (216), Expect(3) = 1e-042
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -2 / -2
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSG 582
++ EMATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SG
Sbjct: 80020 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSG 79856
Score = 72.1 bits (151), Expect(3) = 4e-021
Identities = 33/48 (68%), Positives = 36/48 (75%)
Frame = +1 / +3
Query: 583 PEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFLTICQIRSPGTV 726
PE L E L RLL SL+N TLALPLPNCFT+K+LF TI QI PGTV
Sbjct: 79857 PECLYELMLTRLLLSLLN*TLALPLPNCFTKKQLFLFTISQINCPGTV 80000
Score = 65.7 bits (137), Expect(3) = 1e-042
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = -2 / -2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQV 414
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV
Sbjct: 79591 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQV 79457
Score = 64.8 bits (135), Expect(3) = 1e-042
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -2 / -1
Query: 419 QVGDNYYRPDLTKSALGRLSSVYRSLQVAKSGVKKKNRQ 303
QV DNYYRPDL K+AL RLS++ + L+VAKSG K++NRQ
Sbjct: 78602 QVVDNYYRPDLKKAALARLSAISKGLRVAKSGPKRRNRQ 78486
Score = 46.0 bits (94), Expect(3) = 4e-021
Identities = 25/56 (44%), Positives = 28/56 (50%)
Frame = +1 / +3
Query: 406 LSPTWFFTALAILRNSLRITDLWLSFAGVFCFLVLVVERTTAESFPAAGWIVTVFL 573
+S T T L IL NS DL G+FC LVLVV TT S PAA + L
Sbjct: 79449 MSST*LATTLLILENSFLRIDLLTESLGLFCLLVLVVPSTTPWSLPAA*MVTVFLL 79616
Score = 40.9 bits (83), Expect(3) = 4e-021
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = +1 / +1
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPT 417
CLF L PDLAT R LSL A +SGL**LS T
Sbjct: 78487 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT 78600
>ref|NM_001036297.1| Arabidopsis thaliana structural constituent of ribosome AT2G19730
transcript variant AT2G19730.2 mRNA, complete cds
Length = 721
Score = 129 bits (276), Expect(2) = 1e-028
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -2 / +1
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 61 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 240
Query: 554 QPAAGKDSAVVLSTTKTKK 498
Q A + V+ +T K+
Sbjct: 241 QAADKDQAVVLATTKTKKQ 297
Score = 125 bits (268), Expect(2) = 2e-042
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -2 / +1
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 244 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 423
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 424 RLSAISKGLRVAKSGAKQRNRQ 489
Score = 85.8 bits (181), Expect(2) = 6e-024
Identities = 46/82 (56%), Positives = 48/82 (58%)
Frame = +1 / -3
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS TW TA IL NS DL
Sbjct: 488 CLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 309
Query: 484 AGVFCFLVLVVERTTAESFPAA 549
G+FCFLVLVV TTA S AA
Sbjct: 308 LGLFCFLVLVVASTTAWSLSAA 243
Score = 69.8 bits (146), Expect(2) = 2e-042
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1 / +3
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
NGD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 63 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 242
Score = 47.3 bits (97), Expect(2) = 6e-024
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3 / -2
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHFPSPEM 749
+LLHQE VV+ H+LPDQ+ WN RHF E+
Sbjct: 135 ELLHQETVVVLHDLPDQLSWNCRHFKYREI 46
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +3
Query: 339 GCQVWCQEEEQAA 301
GCQV CQ ++Q +
Sbjct: 453 GCQVRCQAKKQTS 491
>ref|NM_127531.2| Arabidopsis thaliana structural constituent of ribosome AT2G19730
transcript variant AT2G19730.1 mRNA, complete cds
Length = 717
Score = 129 bits (276), Expect(2) = 1e-028
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 57 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 236
Query: 554 QPAAGKDSAVVLSTTKTKK 498
Q A + V+ +T K+
Sbjct: 237 QAADKDQAVVLATTKTKKQ 293
Score = 125 bits (268), Expect(2) = 2e-042
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -2 / +3
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 240 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 419
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 420 RLSAISKGLRVAKSGAKQRNRQ 485
Score = 85.8 bits (181), Expect(2) = 9e-024
Identities = 46/82 (56%), Positives = 48/82 (58%)
Frame = +1 / -3
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS TW TA IL NS DL
Sbjct: 484 CLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 305
Query: 484 AGVFCFLVLVVERTTAESFPAA 549
G+FCFLVLVV TTA S AA
Sbjct: 304 LGLFCFLVLVVASTTAWSLSAA 239
Score = 69.8 bits (146), Expect(2) = 2e-042
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1 / +2
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
NGD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 59 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 238
Score = 46.9 bits (96), Expect(2) = 9e-024
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +3 / -2
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV+ H+LPDQ+ WN RHF
Sbjct: 131 ELLHQETVVVLHDLPDQLSWNCRHF 57
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +2
Query: 339 GCQVWCQEEEQAA 301
GCQV CQ ++Q +
Sbjct: 449 GCQVRCQAKKQTS 487
>emb|BX821549.1|CNS0A8EE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL52ZB05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 701
Score = 129 bits (276), Expect(2) = 1e-028
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 45 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 224
Query: 554 QPAAGKDSAVVLSTTKTKK 498
Q A + V+ +T K+
Sbjct: 225 QAADKDQAVVLATTKTKKQ 281
Score = 125 bits (268), Expect(2) = 2e-042
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -2 / +3
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 228 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 407
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 408 RLSAISKGLRVAKSGAKQRNRQ 473
Score = 85.8 bits (181), Expect(2) = 9e-024
Identities = 46/82 (56%), Positives = 48/82 (58%)
Frame = +1 / -2
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS TW TA IL NS DL
Sbjct: 472 CLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 293
Query: 484 AGVFCFLVLVVERTTAESFPAA 549
G+FCFLVLVV TTA S AA
Sbjct: 292 LGLFCFLVLVVASTTAWSLSAA 227
Score = 69.8 bits (146), Expect(2) = 2e-042
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1 / +2
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
NGD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 47 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 226
Score = 46.9 bits (96), Expect(2) = 9e-024
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +3 / -1
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV+ H+LPDQ+ WN RHF
Sbjct: 119 ELLHQETVVVLHDLPDQLSWNCRHF 45
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +2
Query: 339 GCQVWCQEEEQAA 301
GCQV CQ ++Q +
Sbjct: 437 GCQVRCQAKKQTS 475
>emb|BX820934.1|CNS0A8QP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH82ZG10 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 695
Score = 129 bits (276), Expect(2) = 1e-028
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -2 / +1
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 43 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 222
Query: 554 QPAAGKDSAVVLSTTKTKK 498
Q A + V+ +T K+
Sbjct: 223 QAADKDQAVVLATTKTKKQ 279
Score = 125 bits (268), Expect(2) = 2e-042
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -2 / +1
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 226 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 405
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 406 RLSAISKGLRVAKSGAKQRNRQ 471
Score = 85.8 bits (181), Expect(2) = 9e-024
Identities = 46/82 (56%), Positives = 48/82 (58%)
Frame = +1 / -1
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS TW TA IL NS DL
Sbjct: 470 CLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 291
Query: 484 AGVFCFLVLVVERTTAESFPAA 549
G+FCFLVLVV TTA S AA
Sbjct: 290 LGLFCFLVLVVASTTAWSLSAA 225
Score = 69.8 bits (146), Expect(2) = 2e-042
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1 / +3
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
NGD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 45 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 224
Score = 46.9 bits (96), Expect(2) = 9e-024
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +3 / -3
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV+ H+LPDQ+ WN RHF
Sbjct: 117 ELLHQETVVVLHDLPDQLSWNCRHF 43
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +3
Query: 339 GCQVWCQEEEQAA 301
GCQV CQ ++Q +
Sbjct: 435 GCQVRCQAKKQTS 473
>gb|AV823405.1|AV823405 AV823405 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-18-M20 5',
mRNA sequence
Length = 673
Score = 129 bits (276), Expect(2) = 1e-028
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -2 / +1
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 58 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 237
Query: 554 QPAAGKDSAVVLSTTKTKK 498
Q A + V+ +T K+
Sbjct: 238 QAADKDQAVVLATTKTKKQ 294
Score = 125 bits (268), Expect(2) = 2e-042
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -2 / +1
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 241 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 420
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 421 RLSAISKGLRVAKSGAKQRNRQ 486
Score = 85.8 bits (181), Expect(2) = 9e-024
Identities = 46/82 (56%), Positives = 48/82 (58%)
Frame = +1 / -3
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS TW TA IL NS DL
Sbjct: 485 CLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 306
Query: 484 AGVFCFLVLVVERTTAESFPAA 549
G+FCFLVLVV TTA S AA
Sbjct: 305 LGLFCFLVLVVASTTAWSLSAA 240
Score = 69.8 bits (146), Expect(2) = 2e-042
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1 / +3
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
NGD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 60 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 239
Score = 46.9 bits (96), Expect(2) = 9e-024
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +3 / -2
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV+ H+LPDQ+ WN RHF
Sbjct: 132 ELLHQETVVVLHDLPDQLSWNCRHF 58
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +3
Query: 339 GCQVWCQEEEQAA 301
GCQV CQ ++Q +
Sbjct: 450 GCQVRCQAKKQTS 488
>gb|CF652487.1|CF652487 58-L020526w-066-003-D16-SP6P MPIZ-ADIS-066 Arabidopsis thaliana
cDNA clone MPIZp2001D163Q 5-PRIME, mRNA sequence
Length = 661
Score = 129 bits (276), Expect(2) = 1e-028
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 44 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 223
Query: 554 QPAAGKDSAVVLSTTKTKK 498
Q A + V+ +T K+
Sbjct: 224 QAADKDQAVVLATTKTKKQ 280
Score = 125 bits (268), Expect(2) = 2e-042
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -2 / +2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 227 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 406
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 407 RLSAISKGLRVAKSGAKQRNRQ 472
Score = 85.8 bits (181), Expect(2) = 6e-024
Identities = 46/82 (56%), Positives = 48/82 (58%)
Frame = +1 / -2
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS TW TA IL NS DL
Sbjct: 471 CLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 292
Query: 484 AGVFCFLVLVVERTTAESFPAA 549
G+FCFLVLVV TTA S AA
Sbjct: 291 LGLFCFLVLVVASTTAWSLSAA 226
Score = 69.8 bits (146), Expect(2) = 2e-042
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1 / +1
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
NGD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 46 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 225
Score = 47.3 bits (97), Expect(2) = 6e-024
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3 / -1
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHFPSPEM 749
+LLHQE VV+ H+LPDQ+ WN RHF E+
Sbjct: 118 ELLHQETVVVLHDLPDQLSWNCRHFKYREI 29
Score = 22.1 bits (42), Expect(2) = 1e-028
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +1
Query: 339 GCQVWCQEEEQAA 301
GCQV CQ ++Q +
Sbjct: 436 GCQVRCQAKKQTS 474
>gb|AV784363.1|AV784363 AV784363 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-18-M20 3',
mRNA sequence
Length = 648
Score = 129 bits (276), Expect(2) = 9e-029
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -2 / -2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 575 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 396
Query: 554 QPAAGKDSAVVLSTTKTKK 498
Q A + V+ +T K+
Sbjct: 395 QAADKDQAVVLATTKTKKQ 339
Score = 125 bits (268), Expect(2) = 2e-042
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -2 / -2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 392 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 213
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 212 RLSAISKGLRVAKSGAKQRNRQ 147
Score = 85.8 bits (181), Expect(2) = 9e-024
Identities = 46/82 (56%), Positives = 48/82 (58%)
Frame = +1 / +1
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS TW TA IL NS DL
Sbjct: 148 CLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 327
Query: 484 AGVFCFLVLVVERTTAESFPAA 549
G+FCFLVLVV TTA S AA
Sbjct: 328 LGLFCFLVLVVASTTAWSLSAA 393
Score = 69.8 bits (146), Expect(2) = 2e-042
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1 / -1
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
NGD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 573 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 394
Score = 46.9 bits (96), Expect(2) = 9e-024
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +3 / +3
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV+ H+LPDQ+ WN RHF
Sbjct: 501 ELLHQETVVVLHDLPDQLSWNCRHF 575
Score = 22.1 bits (42), Expect(2) = 9e-029
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / -1
Query: 339 GCQVWCQEEEQAA 301
GCQV CQ ++Q +
Sbjct: 183 GCQVRCQAKKQTS 145
>gb|AY050769.1| Arabidopsis thaliana putative ribosomal protein L28 (At2g19730)
mRNA, complete cds
Length = 647
Score = 129 bits (276), Expect(2) = 9e-029
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 57 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 236
Query: 554 QPAAGKDSAVVLSTTKTKK 498
Q A + V+ +T K+
Sbjct: 237 QAADKDQAVVLATTKTKKQ 293
Score = 125 bits (268), Expect(2) = 2e-042
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -2 / +3
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 240 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 419
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 420 RLSAISKGLRVAKSGAKQRNRQ 485
Score = 85.8 bits (181), Expect(2) = 9e-024
Identities = 46/82 (56%), Positives = 48/82 (58%)
Frame = +1 / -2
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS TW TA IL NS DL
Sbjct: 484 CLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 305
Query: 484 AGVFCFLVLVVERTTAESFPAA 549
G+FCFLVLVV TTA S AA
Sbjct: 304 LGLFCFLVLVVASTTAWSLSAA 239
Score = 69.8 bits (146), Expect(2) = 2e-042
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1 / +2
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
NGD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 59 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 238
Score = 46.9 bits (96), Expect(2) = 9e-024
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +3 / -1
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV+ H+LPDQ+ WN RHF
Sbjct: 131 ELLHQETVVVLHDLPDQLSWNCRHF 57
Score = 22.1 bits (42), Expect(2) = 9e-029
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +2
Query: 339 GCQVWCQEEEQAA 301
GCQV CQ ++Q +
Sbjct: 449 GCQVRCQAKKQTS 487
>gb|CK120324.1|CK120324 207m05.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011M05207
5-PRIME, mRNA sequence
Length = 623
Score = 129 bits (276), Expect(2) = 9e-029
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 48 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 227
Query: 554 QPAAGKDSAVVLSTTKTKK 498
Q A + V+ +T K+
Sbjct: 228 QAADKDQAVVLATTKTKKQ 284
Score = 125 bits (268), Expect(2) = 2e-042
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -2 / +3
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 231 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 410
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 411 RLSAISKGLRVAKSGAKQRNRQ 476
Score = 85.8 bits (181), Expect(2) = 6e-024
Identities = 46/82 (56%), Positives = 48/82 (58%)
Frame = +1 / -2
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS TW TA IL NS DL
Sbjct: 475 CLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 296
Query: 484 AGVFCFLVLVVERTTAESFPAA 549
G+FCFLVLVV TTA S AA
Sbjct: 295 LGLFCFLVLVVASTTAWSLSAA 230
Score = 69.8 bits (146), Expect(2) = 2e-042
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1 / +2
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
NGD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 50 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 229
Score = 47.3 bits (97), Expect(2) = 6e-024
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3 / -1
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHFPSPEM 749
+LLHQE VV+ H+LPDQ+ WN RHF E+
Sbjct: 122 ELLHQETVVVLHDLPDQLSWNCRHFKYREI 33
Score = 22.1 bits (42), Expect(2) = 9e-029
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +2
Query: 339 GCQVWCQEEEQAA 301
GCQV CQ ++Q +
Sbjct: 440 GCQVRCQAKKQTS 478
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70
Length = 198429
Score = 101 bits (216), Expect(3) = 4e-042
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -2 / -2
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSG 582
++ EMATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SG
Sbjct: 198059 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSG 197895
Score = 65.7 bits (137), Expect(3) = 4e-042
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = -2 / -2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQV 414
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV
Sbjct: 197630 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQV 197496
Score = 64.8 bits (135), Expect(3) = 4e-042
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -2 / -1
Query: 419 QVGDNYYRPDLTKSALGRLSSVYRSLQVAKSGVKKKNRQ 303
QV DNYYRPDL K+AL RLS++ + L+VAKSG K++NRQ
Sbjct: 196641 QVVDNYYRPDLKKAALARLSAISKGLRVAKSGPKRRNRQ 196525
>emb|AL161575.2|ATCHRIV71 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 71
Length = 200001
Score = 101 bits (216), Expect(3) = 4e-042
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -2 / -3
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSG 582
++ EMATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SG
Sbjct: 4630 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSG 4466
Score = 65.7 bits (137), Expect(3) = 4e-042
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = -2 / -3
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQV 414
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV
Sbjct: 4201 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQV 4067
Score = 64.8 bits (135), Expect(3) = 4e-042
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -2 / -2
Query: 419 QVGDNYYRPDLTKSALGRLSSVYRSLQVAKSGVKKKNRQ 303
QV DNYYRPDL K+AL RLS++ + L+VAKSG K++NRQ
Sbjct: 3212 QVVDNYYRPDLKKAALARLSAISKGLRVAKSGPKRRNRQ 3096
>gb|CF652479.1|CF652479 58-L020167-066-001-D16-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001D161Q 5-PRIME, mRNA sequence
Length = 689
Score = 128 bits (274), Expect(2) = 2e-028
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 45 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 224
Query: 554 QPAAGKDSAVVLSTTKTKK 498
Q A + V+ +T K+
Sbjct: 225 QAAD*DQAVVLATTKTKKQ 281
Score = 123 bits (263), Expect(2) = 8e-042
Identities = 53/82 (64%), Positives = 66/82 (80%)
Frame = -2 / +3
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA D AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 228 AAD*DQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 407
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K+KNRQ
Sbjct: 408 RLSAIIKGLRVAKSGAKQKNRQ 473
Score = 95.9 bits (203), Expect(2) = 1e-038
Identities = 42/61 (68%), Positives = 48/61 (78%)
Frame = +1 / -2
Query: 544 AAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFLTICQIRSPGT 723
+A W+VTVFLFA+PE L*E TL RLL SL+N TL PLPNCFT+K+L F TI QI PGT
Sbjct: 235 SAAWMVTVFLFARPECL*E*TLVRLLVSLLN*TLEFPLPNCFTKKQLLFFTISQINCPGT 56
Query: 724 V 726
V
Sbjct: 55 V 53
Score = 86.8 bits (183), Expect(2) = 1e-038
Identities = 47/82 (57%), Positives = 49/82 (59%)
Frame = +1 / -2
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLFF L PDLAT R LSL A +SGL**LS TW TA IL NS DL
Sbjct: 472 CLFFCLAPDLATLRPLMMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 293
Query: 484 AGVFCFLVLVVERTTAESFPAA 549
G+FCFLVLVV TTA S AA
Sbjct: 292 LGLFCFLVLVVASTTAWS*SAA 227
Score = 69.8 bits (146), Expect(2) = 8e-042
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1 / +2
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
NGD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 47 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 226
Score = 22.1 bits (42), Expect(2) = 2e-028
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +2
Query: 339 GCQVWCQEEEQAA 301
GCQV CQ ++Q +
Sbjct: 437 GCQVRCQAKKQTS 475
>gb|CB265133.1|CB265133 07-E014661-035-002-N02-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000N022Q 5-PRIME, mRNA sequence
Length = 523
Score = 129 bits (276), Expect = 1e-028
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -2 / +1
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 52 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 231
Query: 554 QPAAGKDSAVVLSTTKTKK 498
Q A + V+ +T K+
Sbjct: 232 QAADKDQAVVLATTKTKKQ 288
Score = 122 bits (262), Expect(2) = 1e-041
Identities = 53/82 (64%), Positives = 66/82 (80%)
Frame = -2 / +1
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 235 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 414
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ SL+VAKS K++NRQ
Sbjct: 415 RLSAISNSLKVAKSRAKQRNRQ 480
Score = 84.9 bits (179), Expect(2) = 2e-023
Identities = 46/82 (56%), Positives = 48/82 (58%)
Frame = +1 / -3
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L DLAT RL LSL A +SGL**LS TW TA IL NS DL
Sbjct: 479 CLFLCLARDLATLRLLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 300
Query: 484 AGVFCFLVLVVERTTAESFPAA 549
G+FCFLVLVV TTA S AA
Sbjct: 299 LGLFCFLVLVVASTTAWSLSAA 234
Score = 69.8 bits (146), Expect(2) = 1e-041
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1 / +3
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
NGD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 54 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 233
Score = 46.9 bits (96), Expect(2) = 2e-023
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +3 / -2
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV+ H+LPDQ+ WN RHF
Sbjct: 126 ELLHQETVVVLHDLPDQLSWNCRHF 52
>gb|AY079378.1| Arabidopsis thaliana putative ribosomal protein L28 (At2g19730)
mRNA, complete cds
Length = 463
Score = 127 bits (271), Expect(2) = 3e-028
Identities = 53/78 (67%), Positives = 62/78 (79%)
Frame = -2 / +1
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
MATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 180
Query: 551 PAAGKDSAVVLSTTKTKK 498
A + V+ +T K+
Sbjct: 181 AADKDQAVVLATTKTKKQ 234
Score = 125 bits (268), Expect(2) = 1e-041
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -2 / +1
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 181 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 360
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 361 RLSAISKGLRVAKSGAKQRNRQ 426
Score = 85.8 bits (181), Expect(2) = 6e-023
Identities = 46/82 (56%), Positives = 48/82 (58%)
Frame = +1 / -3
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS TW TA IL NS DL
Sbjct: 425 CLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 246
Query: 484 AGVFCFLVLVVERTTAESFPAA 549
G+FCFLVLVV TTA S AA
Sbjct: 245 LGLFCFLVLVVASTTAWSLSAA 180
Score = 67.0 bits (140), Expect(2) = 1e-041
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = -1 / +3
Query: 729 GDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
GD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 3 GDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 179
Score = 44.1 bits (90), Expect(2) = 6e-023
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3 / -2
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRH 731
+LLHQE VV+ H+LPDQ+ WN RH
Sbjct: 72 ELLHQETVVVLHDLPDQLSWNCRH 1
Score = 22.1 bits (42), Expect(2) = 3e-028
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +3
Query: 339 GCQVWCQEEEQAA 301
GCQV CQ ++Q +
Sbjct: 390 GCQVRCQAKKQTS 428
>emb|AX506227.1| Sequence 922 from Patent WO0216655
Length = 432
Score = 127 bits (271), Expect(2) = 3e-028
Identities = 53/78 (67%), Positives = 62/78 (79%)
Frame = -2 / +1
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
MATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 180
Query: 551 PAAGKDSAVVLSTTKTKK 498
A + V+ +T K+
Sbjct: 181 AADKDQAVVLATTKTKKQ 234
Score = 125 bits (268), Expect(2) = 1e-041
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -2 / +1
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 181 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 360
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 361 RLSAISKGLRVAKSGAKQRNRQ 426
Score = 85.8 bits (181), Expect(2) = 6e-023
Identities = 46/82 (56%), Positives = 48/82 (58%)
Frame = +1 / -2
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS TW TA IL NS DL
Sbjct: 425 CLFLCLAPDLATLRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 246
Query: 484 AGVFCFLVLVVERTTAESFPAA 549
G+FCFLVLVV TTA S AA
Sbjct: 245 LGLFCFLVLVVASTTAWSLSAA 180
Score = 67.0 bits (140), Expect(2) = 1e-041
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = -1 / +3
Query: 729 GDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
GD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 3 GDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 179
Score = 44.1 bits (90), Expect(2) = 6e-023
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3 / -1
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRH 731
+LLHQE VV+ H+LPDQ+ WN RH
Sbjct: 72 ELLHQETVVVLHDLPDQLSWNCRH 1
Score = 22.1 bits (42), Expect(2) = 3e-028
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +3
Query: 339 GCQVWCQEEEQAA 301
GCQV CQ ++Q +
Sbjct: 390 GCQVRCQAKKQTS 428
>gb|BP863424.1|BP863424 BP863424 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-66-K15 5',
mRNA sequence
Length = 412
Score = 123 bits (264), Expect(2) = 2e-041
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 57 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 236
Query: 554 Q 552
Q
Sbjct: 237 Q 239
Score = 93.6 bits (198), Expect(2) = 3e-027
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = +1 / -1
Query: 553 WIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFLTICQIRSPGTV 726
W+VTVFLFA+PE L*E TL RLL SL+N TL PLPNCFT+K+L F TI QI PGTV
Sbjct: 238 WMVTVFLFARPECL*E*TLVRLLVSLLN*TLEFPLPNCFTKKQLLFFTISQINCPGTV 65
Score = 68.4 bits (143), Expect(2) = 2e-041
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = -2 / +2
Query: 515 TTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKS 378
TTKTKKQN P KS+++KEF +M+KAV NQV DNY RPDL K+
Sbjct: 275 TTKTKKQNKPKLSVKKSILKKEFPRMSKAVANQVVDNY*RPDLKKA 412
Score = 50.6 bits (104), Expect(2) = 3e-027
Identities = 25/43 (58%), Positives = 27/43 (62%)
Frame = +1 / -2
Query: 388 RSGL**LSPTWFFTALAILRNSLRITDLWLSFAGVFCFLVLVV 516
+SGL**LS TW TA IL NS D G+FCFLVLVV
Sbjct: 402 KSGL**LSTTWLATAFDILGNSFLRIDFLTESLGLFCFLVLVV 274
>gb|BE038429.1|BE038429 AA17D06 AA Arabidopsis thaliana cDNA 5' similar to ribosomal
protein l28, mRNA sequence
Length = 699
Score = 124 bits (266), Expect(2) = 2e-027
Identities = 52/77 (67%), Positives = 61/77 (79%)
Frame = -2 / +3
Query: 728 ATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQP 549
ATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTIQ
Sbjct: 9 ATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQA 188
Query: 548 AAGKDSAVVLSTTKTKK 498
A + V+ +T K+
Sbjct: 189 ADKDQAVVLATTKTKKQ 239
Score = 123 bits (264), Expect(2) = 4e-041
Identities = 52/82 (63%), Positives = 66/82 (80%)
Frame = -2 / +3
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 186 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 365
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+ AKSG K++NRQ
Sbjct: 366 RLSAISKGLRAAKSGAKQRNRQ 431
Score = 83.5 bits (176), Expect(2) = 3e-021
Identities = 45/82 (54%), Positives = 47/82 (57%)
Frame = +1 / -3
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLA R LSL A +SGL**LS TW TA IL NS DL
Sbjct: 430 CLFLCLAPDLAALRPLLMALSLASAAFFKSGL**LSTTWLATAFDILGNSFLRIDLLTES 251
Query: 484 AGVFCFLVLVVERTTAESFPAA 549
G+FCFLVLVV TTA S AA
Sbjct: 250 LGLFCFLVLVVASTTAWSLSAA 185
Score = 67.0 bits (140), Expect(2) = 4e-041
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = -1 / +2
Query: 729 GDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
GD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 8 GDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 184
Score = 40.5 bits (82), Expect(2) = 3e-021
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3 / -2
Query: 660 KLLHQEGVVLPHNLPDQIPWNGR 728
+LLHQE VV+ H+LPDQ+ WN R
Sbjct: 77 ELLHQETVVVLHDLPDQLSWNCR 9
Score = 22.1 bits (42), Expect(2) = 2e-027
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +2
Query: 339 GCQVWCQEEEQAA 301
GCQV CQ ++Q +
Sbjct: 395 GCQVRCQAKKQTS 433
>ref|NM_119086.3| Arabidopsis thaliana structural constituent of ribosome AT4G29410
mRNA, complete cds
Length = 709
Score = 127 bits (271), Expect = 6e-028
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = -2 / +2
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKK 567
++ EMATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SGLANKK
Sbjct: 68 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 247
Query: 566 TVTIQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNY 402
TVTIQ A V+ +T ++ ++ + ++ R V + Y
Sbjct: 248 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYY 412
Score = 123 bits (263), Expect(2) = 1e-040
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -2 / +2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K+AL
Sbjct: 263 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 442
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 443 RLSAISKGLRVAKSGPKRRNRQ 508
Score = 79.4 bits (167), Expect(3) = 3e-024
Identities = 45/90 (50%), Positives = 48/90 (53%)
Frame = +1 / -2
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS T T L IL NS DL
Sbjct: 507 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 328
Query: 484 AGVFCFLVLVVERTTAESFPAAGWIVTVFL 573
G+FC LVLVV TT S PAA + L
Sbjct: 327 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLL 238
Score = 65.7 bits (137), Expect(2) = 1e-040
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = -1 / +1
Query: 750 SSPAKGNGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQ 571
SS NG SR DL D EE+QL GEA+ R CQG+V Q QQP Q L+Q LW +Q
Sbjct: 64 SSEGARNGHSSRTVDLGDREEKQLFLGEAIR*R*CQGSVQQREQQPRQHQLVQALWFGQQ 243
Query: 570 EN 565
++
Sbjct: 244 KD 249
Score = 42.3 bits (86), Expect(3) = 3e-024
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / -1
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV H+LPDQ+ WN HF
Sbjct: 154 ELLHQETVVSLHDLPDQLSWNCGHF 80
Score = 30.4 bits (60), Expect(3) = 3e-024
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2 / -3
Query: 572 CLLSQSTCRSVHCRGCWAPW*TAPWH 649
C +QS C S RGC + *T PWH
Sbjct: 242 CWPNQSACTS*C*RGCCSLC*TEPWH 165
>emb|BX828625.1|CNS0A2F6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL22ZH11 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 691
Score = 127 bits (271), Expect = 6e-028
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = -2 / +2
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKK 567
++ EMATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SGLANKK
Sbjct: 50 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 229
Query: 566 TVTIQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNY 402
TVTIQ A V+ +T ++ ++ + ++ R V + Y
Sbjct: 230 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYY 394
Score = 123 bits (263), Expect(2) = 1e-040
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -2 / +2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K+AL
Sbjct: 245 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 424
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 425 RLSAISKGLRVAKSGPKRRNRQ 490
Score = 79.4 bits (167), Expect(3) = 3e-024
Identities = 45/90 (50%), Positives = 48/90 (53%)
Frame = +1 / -2
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS T T L IL NS DL
Sbjct: 489 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 310
Query: 484 AGVFCFLVLVVERTTAESFPAAGWIVTVFL 573
G+FC LVLVV TT S PAA + L
Sbjct: 309 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLL 220
Score = 65.7 bits (137), Expect(2) = 1e-040
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = -1 / +1
Query: 750 SSPAKGNGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQ 571
SS NG SR DL D EE+QL GEA+ R CQG+V Q QQP Q L+Q LW +Q
Sbjct: 46 SSEGARNGHSSRTVDLGDREEKQLFLGEAIR*R*CQGSVQQREQQPRQHQLVQALWFGQQ 225
Query: 570 EN 565
++
Sbjct: 226 KD 231
Score = 42.3 bits (86), Expect(3) = 3e-024
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / -1
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV H+LPDQ+ WN HF
Sbjct: 136 ELLHQETVVSLHDLPDQLSWNCGHF 62
Score = 30.4 bits (60), Expect(3) = 3e-024
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2 / -3
Query: 572 CLLSQSTCRSVHCRGCWAPW*TAPWH 649
C +QS C S RGC + *T PWH
Sbjct: 224 CWPNQSACTS*C*RGCCSLC*TEPWH 147
>gb|AV822896.1|AV822896 AV822896 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-12-O17 5',
mRNA sequence
Length = 676
Score = 127 bits (271), Expect = 6e-028
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = -2 / +1
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKK 567
++ EMATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SGLANKK
Sbjct: 64 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 243
Query: 566 TVTIQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNY 402
TVTIQ A V+ +T ++ ++ + ++ R V + Y
Sbjct: 244 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYY 408
Score = 123 bits (263), Expect(2) = 1e-040
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -2 / +1
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K+AL
Sbjct: 259 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 438
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 439 RLSAISKGLRVAKSGPKRRNRQ 504
Score = 79.4 bits (167), Expect(3) = 3e-024
Identities = 45/90 (50%), Positives = 48/90 (53%)
Frame = +1 / -3
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS T T L IL NS DL
Sbjct: 503 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 324
Query: 484 AGVFCFLVLVVERTTAESFPAAGWIVTVFL 573
G+FC LVLVV TT S PAA + L
Sbjct: 323 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLL 234
Score = 65.7 bits (137), Expect(2) = 1e-040
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = -1 / +3
Query: 750 SSPAKGNGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQ 571
SS NG SR DL D EE+QL GEA+ R CQG+V Q QQP Q L+Q LW +Q
Sbjct: 60 SSEGARNGHSSRTVDLGDREEKQLFLGEAIR*R*CQGSVQQREQQPRQHQLVQALWFGQQ 239
Query: 570 EN 565
++
Sbjct: 240 KD 245
Score = 42.3 bits (86), Expect(3) = 3e-024
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / -2
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV H+LPDQ+ WN HF
Sbjct: 150 ELLHQETVVSLHDLPDQLSWNCGHF 76
Score = 30.4 bits (60), Expect(3) = 3e-024
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2 / -1
Query: 572 CLLSQSTCRSVHCRGCWAPW*TAPWH 649
C +QS C S RGC + *T PWH
Sbjct: 238 CWPNQSACTS*C*RGCCSLC*TEPWH 161
>emb|BX829363.1|CNS0A3JN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL95ZC06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 675
Score = 127 bits (271), Expect = 6e-028
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = -2 / +2
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKK 567
++ EMATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SGLANKK
Sbjct: 53 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 232
Query: 566 TVTIQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNY 402
TVTIQ A V+ +T ++ ++ + ++ R V + Y
Sbjct: 233 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYY 397
Score = 123 bits (263), Expect(2) = 1e-040
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -2 / +2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K+AL
Sbjct: 248 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 427
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 428 RLSAISKGLRVAKSGPKRRNRQ 493
Score = 79.4 bits (167), Expect(3) = 3e-024
Identities = 45/90 (50%), Positives = 48/90 (53%)
Frame = +1 / -1
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS T T L IL NS DL
Sbjct: 492 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 313
Query: 484 AGVFCFLVLVVERTTAESFPAAGWIVTVFL 573
G+FC LVLVV TT S PAA + L
Sbjct: 312 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLL 223
Score = 65.7 bits (137), Expect(2) = 1e-040
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = -1 / +1
Query: 750 SSPAKGNGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQ 571
SS NG SR DL D EE+QL GEA+ R CQG+V Q QQP Q L+Q LW +Q
Sbjct: 49 SSEGARNGHSSRTVDLGDREEKQLFLGEAIR*R*CQGSVQQREQQPRQHQLVQALWFGQQ 228
Query: 570 EN 565
++
Sbjct: 229 KD 234
Score = 42.3 bits (86), Expect(3) = 3e-024
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / -3
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV H+LPDQ+ WN HF
Sbjct: 139 ELLHQETVVSLHDLPDQLSWNCGHF 65
Score = 30.4 bits (60), Expect(3) = 3e-024
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2 / -2
Query: 572 CLLSQSTCRSVHCRGCWAPW*TAPWH 649
C +QS C S RGC + *T PWH
Sbjct: 227 CWPNQSACTS*C*RGCCSLC*TEPWH 150
>gb|AY088304.1| Arabidopsis thaliana clone 5426 mRNA, complete sequence
Length = 665
Score = 127 bits (271), Expect = 6e-028
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = -2 / +2
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKK 567
++ EMATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SGLANKK
Sbjct: 68 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 247
Query: 566 TVTIQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNY 402
TVTIQ A V+ +T ++ ++ + ++ R V + Y
Sbjct: 248 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYY 412
Score = 123 bits (263), Expect(2) = 1e-040
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -2 / +2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K+AL
Sbjct: 263 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 442
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 443 RLSAISKGLRVAKSGPKRRNRQ 508
Score = 79.4 bits (167), Expect(3) = 3e-024
Identities = 45/90 (50%), Positives = 48/90 (53%)
Frame = +1 / -3
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS T T L IL NS DL
Sbjct: 507 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 328
Query: 484 AGVFCFLVLVVERTTAESFPAAGWIVTVFL 573
G+FC LVLVV TT S PAA + L
Sbjct: 327 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLL 238
Score = 65.7 bits (137), Expect(2) = 1e-040
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = -1 / +1
Query: 750 SSPAKGNGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQ 571
SS NG SR DL D EE+QL GEA+ R CQG+V Q QQP Q L+Q LW +Q
Sbjct: 64 SSEGARNGHSSRTVDLGDREEKQLFLGEAIR*R*CQGSVQQREQQPRQHQLVQALWFGQQ 243
Query: 570 EN 565
++
Sbjct: 244 KD 249
Score = 42.3 bits (86), Expect(3) = 3e-024
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / -2
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV H+LPDQ+ WN HF
Sbjct: 154 ELLHQETVVSLHDLPDQLSWNCGHF 80
Score = 30.4 bits (60), Expect(3) = 3e-024
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2 / -1
Query: 572 CLLSQSTCRSVHCRGCWAPW*TAPWH 649
C +QS C S RGC + *T PWH
Sbjct: 242 CWPNQSACTS*C*RGCCSLC*TEPWH 165
>gb|AY072328.1| Arabidopsis thaliana putative protein (At4g29410) mRNA, complete
cds
Length = 660
Score = 127 bits (271), Expect = 6e-028
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = -2 / +3
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKK 567
++ EMATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SGLANKK
Sbjct: 63 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 242
Query: 566 TVTIQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNY 402
TVTIQ A V+ +T ++ ++ + ++ R V + Y
Sbjct: 243 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYY 407
Score = 123 bits (263), Expect(2) = 1e-040
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -2 / +3
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K+AL
Sbjct: 258 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 437
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 438 RLSAISKGLRVAKSGPKRRNRQ 503
Score = 79.4 bits (167), Expect(3) = 3e-024
Identities = 45/90 (50%), Positives = 48/90 (53%)
Frame = +1 / -3
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS T T L IL NS DL
Sbjct: 502 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 323
Query: 484 AGVFCFLVLVVERTTAESFPAAGWIVTVFL 573
G+FC LVLVV TT S PAA + L
Sbjct: 322 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLL 233
Score = 65.7 bits (137), Expect(2) = 1e-040
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = -1 / +2
Query: 750 SSPAKGNGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQ 571
SS NG SR DL D EE+QL GEA+ R CQG+V Q QQP Q L+Q LW +Q
Sbjct: 59 SSEGARNGHSSRTVDLGDREEKQLFLGEAIR*R*CQGSVQQREQQPRQHQLVQALWFGQQ 238
Query: 570 EN 565
++
Sbjct: 239 KD 244
Score = 42.3 bits (86), Expect(3) = 3e-024
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / -2
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV H+LPDQ+ WN HF
Sbjct: 149 ELLHQETVVSLHDLPDQLSWNCGHF 75
Score = 30.4 bits (60), Expect(3) = 3e-024
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2 / -1
Query: 572 CLLSQSTCRSVHCRGCWAPW*TAPWH 649
C +QS C S RGC + *T PWH
Sbjct: 237 CWPNQSACTS*C*RGCCSLC*TEPWH 160
>gb|AV553363.1|AV553363 AV553363 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ60g08R 5', mRNA sequence
Length = 548
Score = 127 bits (271), Expect = 6e-028
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = -2 / +1
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKK 567
++ EMATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SGLANKK
Sbjct: 31 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 210
Query: 566 TVTIQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNY 402
TVTIQ A V+ +T ++ ++ + ++ R V + Y
Sbjct: 211 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYY 375
Score = 123 bits (263), Expect(2) = 1e-040
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -2 / +1
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K+AL
Sbjct: 226 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 405
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 406 RLSAISKGLRVAKSGPKRRNRQ 471
Score = 79.4 bits (167), Expect(3) = 3e-024
Identities = 45/90 (50%), Positives = 48/90 (53%)
Frame = +1 / -1
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS T T L IL NS DL
Sbjct: 470 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 291
Query: 484 AGVFCFLVLVVERTTAESFPAAGWIVTVFL 573
G+FC LVLVV TT S PAA + L
Sbjct: 290 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLL 201
Score = 65.7 bits (137), Expect(2) = 1e-040
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = -1 / +3
Query: 750 SSPAKGNGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQ 571
SS NG SR DL D EE+QL GEA+ R CQG+V Q QQP Q L+Q LW +Q
Sbjct: 27 SSEGARNGHSSRTVDLGDREEKQLFLGEAIR*R*CQGSVQQREQQPRQHQLVQALWFGQQ 206
Query: 570 EN 565
++
Sbjct: 207 KD 212
Score = 42.3 bits (86), Expect(3) = 3e-024
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / -3
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV H+LPDQ+ WN HF
Sbjct: 117 ELLHQETVVSLHDLPDQLSWNCGHF 43
Score = 30.4 bits (60), Expect(3) = 3e-024
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2 / -2
Query: 572 CLLSQSTCRSVHCRGCWAPW*TAPWH 649
C +QS C S RGC + *T PWH
Sbjct: 205 CWPNQSACTS*C*RGCCSLC*TEPWH 128
>gb|AV553570.1|AV553570 AV553570 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ66c10R 5', mRNA sequence
Length = 505
Score = 127 bits (271), Expect = 6e-028
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = -2 / +2
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKK 567
++ EMATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SGLANKK
Sbjct: 44 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 223
Query: 566 TVTIQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNY 402
TVTIQ A V+ +T ++ ++ + ++ R V + Y
Sbjct: 224 TVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYY 388
Score = 123 bits (263), Expect(2) = 1e-040
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -2 / +2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K+AL
Sbjct: 239 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 418
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 419 RLSAISKGLRVAKSGPKRRNRQ 484
Score = 79.4 bits (167), Expect(3) = 3e-024
Identities = 45/90 (50%), Positives = 48/90 (53%)
Frame = +1 / -2
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS T T L IL NS DL
Sbjct: 483 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 304
Query: 484 AGVFCFLVLVVERTTAESFPAAGWIVTVFL 573
G+FC LVLVV TT S PAA + L
Sbjct: 303 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLL 214
Score = 65.7 bits (137), Expect(2) = 1e-040
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = -1 / +1
Query: 750 SSPAKGNGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQ 571
SS NG SR DL D EE+QL GEA+ R CQG+V Q QQP Q L+Q LW +Q
Sbjct: 40 SSEGARNGHSSRTVDLGDREEKQLFLGEAIR*R*CQGSVQQREQQPRQHQLVQALWFGQQ 219
Query: 570 EN 565
++
Sbjct: 220 KD 225
Score = 42.3 bits (86), Expect(3) = 3e-024
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / -1
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRHF 734
+LLHQE VV H+LPDQ+ WN HF
Sbjct: 130 ELLHQETVVSLHDLPDQLSWNCGHF 56
Score = 30.4 bits (60), Expect(3) = 3e-024
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2 / -3
Query: 572 CLLSQSTCRSVHCRGCWAPW*TAPWH 649
C +QS C S RGC + *T PWH
Sbjct: 218 CWPNQSACTS*C*RGCCSLC*TEPWH 141
>gb|BP860079.1|BP860079 BP860079 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-42-P20 5',
mRNA sequence
Length = 395
Score = 126 bits (269), Expect(2) = 1e-040
Identities = 52/74 (70%), Positives = 60/74 (81%)
Frame = -2 / +1
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 52 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLSNVHSYKHSGLANKKTVTI 231
Query: 554 QPAAGKDSAVVLST 513
Q + V+ +T
Sbjct: 232 QAGDKDQAVVLATT 273
Score = 93.6 bits (198), Expect(2) = 3e-025
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = +1 / -1
Query: 553 WIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFLTICQIRSPGTV 726
W+VTVFLFA+PE L*E TL RLL SL+N TL PLPNCFT+K+L F TI QI PGTV
Sbjct: 233 WMVTVFLFARPECL*E*TLLRLLVSLLN*TLEFPLPNCFTKKQLLFFTISQINCPGTV 60
Score = 62.9 bits (131), Expect(2) = 1e-040
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = -2 / +2
Query: 509 KTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPD 390
K KKQN P +KS+++KEF +M+KAV NQV DNYYRPD
Sbjct: 275 KPKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPD 394
Score = 44.1 bits (90), Expect(2) = 3e-025
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = +1 / -3
Query: 391 SGL**LSPTWFFTALAILRNSLRITDLWLSFAGVFCFL 504
SGL**LS TW TA IL NS DL G+FCFL
Sbjct: 393 SGL**LSTTWLATAFDILGNSFLRIDLLTESLGLFCFL 280
>gb|CF652803.1|CF652803 77-L020578-066-004-I20-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001I204Q 5-PRIME, mRNA sequence
Length = 616
Score = 125 bits (268), Expect(2) = 2e-039
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -2 / +2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 161 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 340
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 341 RLSAISKGLRVAKSGAKQRNRQ 406
Score = 112 bits (240), Expect(2) = 7e-024
Identities = 47/71 (66%), Positives = 56/71 (78%)
Frame = -2 / +2
Query: 710 LIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDS 531
LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTIQ A +
Sbjct: 2 LIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQAADKDQA 181
Query: 530 AVVLSTTKTKK 498
V+ +T K+
Sbjct: 182 VVLATTKTKKQ 214
Score = 59.7 bits (124), Expect(2) = 2e-039
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = -1 / +1
Query: 708 DLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 4 DLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 159
Score = 22.1 bits (42), Expect(2) = 7e-024
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +1
Query: 339 GCQVWCQEEEQAA 301
GCQV CQ ++Q +
Sbjct: 370 GCQVRCQAKKQTS 408
>gb|BT000047.1| Arabidopsis thaliana putative protein (At4g29410) mRNA, complete
cds
Length = 556
Score = 124 bits (265), Expect = 4e-027
Identities = 54/110 (49%), Positives = 71/110 (64%)
Frame = -2 / +1
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
MATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 180
Query: 551 PAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNY 402
A V+ +T ++ ++ + ++ R V + Y
Sbjct: 181 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYY 330
Score = 123 bits (263), Expect(2) = 3e-039
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -2 / +1
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K+AL
Sbjct: 181 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 360
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 361 RLSAISKGLRVAKSGPKRRNRQ 426
Score = 79.4 bits (167), Expect(3) = 2e-023
Identities = 45/90 (50%), Positives = 48/90 (53%)
Frame = +1 / -3
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL**LS T T L IL NS DL
Sbjct: 425 CLFLLLGPDLATLRPLLIALSLASAAFFKSGL**LSTT*LATTLLILENSFLRIDLLTES 246
Query: 484 AGVFCFLVLVVERTTAESFPAAGWIVTVFL 573
G+FC LVLVV TT S PAA + L
Sbjct: 245 LGLFCLLVLVVPSTTPWSLPAA*MVTVFLL 156
Score = 61.1 bits (127), Expect(2) = 3e-039
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = -1 / +3
Query: 729 GDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQEN 565
G SR DL D EE+QL GEA+ R CQG+V Q QQP Q L+Q LW +Q++
Sbjct: 3 GHSSRTVDLGDREEKQLFLGEAIR*R*CQGSVQQREQQPRQHQLVQALWFGQQKD 167
Score = 39.6 bits (80), Expect(3) = 2e-023
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3 / -2
Query: 660 KLLHQEGVVLPHNLPDQIPWNGRH 731
+LLHQE VV H+LPDQ+ WN H
Sbjct: 72 ELLHQETVVSLHDLPDQLSWNCGH 1
Score = 30.4 bits (60), Expect(3) = 2e-023
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2 / -1
Query: 572 CLLSQSTCRSVHCRGCWAPW*TAPWH 649
C +QS C S RGC + *T PWH
Sbjct: 160 CWPNQSACTS*C*RGCCSLC*TEPWH 83
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 101 bits (216), Expect(3) = 2e-038
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -2 / -1
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSG 582
++ EMATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SG
Sbjct: 10382755 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSG 10382591
Score = 65.7 bits (137), Expect(3) = 2e-038
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = -2 / -1
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQV 414
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV
Sbjct: 10382326 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQV 10382192
Score = 64.8 bits (135), Expect(3) = 2e-038
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -2 / -3
Query: 419 QVGDNYYRPDLTKSALGRLSSVYRSLQVAKSGVKKKNRQ 303
QV DNYYRPDL K+AL RLS++ + L+VAKSG K++NRQ
Sbjct: 10381337 QVVDNYYRPDLKKAALARLSAISKGLRVAKSGPKRRNRQ 10381221
>gb|AV550092.1|AV550092 AV550092 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ108b04R 5', mRNA sequence
Length = 422
Score = 125 bits (268), Expect(2) = 1e-037
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -2 / +2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 143 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 322
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 323 RLSAISKGLRVAKSGAKQRNRQ 388
Score = 53.8 bits (111), Expect(2) = 1e-037
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = -1 / +1
Query: 693 EEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 1 EEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 141
>gb|BP842751.1|BP842751 BP842751 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-55-N20 5',
mRNA sequence
Length = 380
Score = 123 bits (264), Expect(2) = 9e-036
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = -2 / +1
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 61 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 240
Query: 554 Q 552
Q
Sbjct: 241 Q 243
Score = 93.6 bits (198), Expect(2) = 9e-024
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = +1 / -1
Query: 553 WIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFLTICQIRSPGTV 726
W+VTVFLFA+PE L*E TL RLL SL+N TL PLPNCFT+K+L F TI QI PGTV
Sbjct: 242 WMVTVFLFARPECL*E*TLVRLLVSLLN*TLEFPLPNCFTKKQLLFFTISQINCPGTV 69
Score = 49.2 bits (101), Expect(2) = 9e-036
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = -2 / +2
Query: 512 TKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQV 414
TKTKKQN P +KS+++KEF +M+KAV NQV
Sbjct: 278 TKTKKQNKPKLSVNKSILKKEFPRMSKAVANQV 376
Score = 39.1 bits (79), Expect(2) = 9e-024
Identities = 18/33 (54%), Positives = 19/33 (57%)
Frame = +1 / -3
Query: 415 TWFFTALAILRNSLRITDLWLSFAGVFCFLVLV 513
TW TA IL NS DL G+FCFLVLV
Sbjct: 375 TWLATAFDILGNSFLRIDLLTESLGLFCFLVLV 277
>gb|AI995261.1|AI995261 701503270 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701503270, mRNA sequence
Length = 420
Score = 129 bits (276), Expect = 1e-028
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 45 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 224
Query: 554 QPAAGKDSAVVLSTTKTKK 498
Q A + V+ +T K+
Sbjct: 225 QAADKDQAVVLATTKTKKQ 281
Score = 98.7 bits (209), Expect(2) = 2e-034
Identities = 42/64 (65%), Positives = 52/64 (81%)
Frame = -2 / +3
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL ++AL
Sbjct: 228 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLQEAALA 407
Query: 368 RLSS 357
RLS+
Sbjct: 408 RLSA 419
Score = 69.8 bits (146), Expect(2) = 2e-034
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1 / +2
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
NGD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 47 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 226
>gb|BP796967.1|BP796967 BP796967 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-01-J10 5',
mRNA sequence
Length = 391
Score = 126 bits (270), Expect(2) = 2e-031
Identities = 53/79 (67%), Positives = 62/79 (78%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NL NVHSYK+SGLANKKTVTI
Sbjct: 56 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETKNLTNVHSYKHSGLANKKTVTI 235
Query: 554 QPAAGKDSAVVLSTTKTKK 498
Q A + V+ +T K+
Sbjct: 236 QAADKDQAVVLATTKTKKQ 292
Score = 68.0 bits (142), Expect(3) = 4e-021
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = -1 / +1
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
NGD SR DL D EE+QL GEAV R+ G++ QG +P Q +LLQ LW KQ++C+ P
Sbjct: 58 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*KPHQRSLLQALWSCKQKDCDHP 237
Score = 50.6 bits (104), Expect(3) = 4e-021
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = -2 / +2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEF 447
AA KD AVVL+TTKTKKQN P +K +++KEF
Sbjct: 239 AADKDQAVVLATTKTKKQNKPKLFVNKFILKKEF 340
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2 / +1
Query: 443 KMAKAVKNQVGDNYYR 396
+M+KAV NQV DNYYR
Sbjct: 343 RMSKAVANQVVDNYYR 390
Score = 22.6 bits (43), Expect(3) = 4e-021
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / +3
Query: 444 QDGQGCEKPGWRQLLQ 397
QD +GC PG QLLQ
Sbjct: 342 QDVKGCC*PGGGQLLQ 389
>gb|T22823.1|T22823 4831 Lambda-PRL2 Arabidopsis thaliana cDNA clone 107I10T7, mRNA
sequence
Length = 489
Score = 134 bits (288), Expect = 3e-030
Identities = 59/116 (50%), Positives = 76/116 (65%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 32 EMATVPGQLIWEIVKNNNXFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 211
Query: 554 QPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDL 387
Q A + V+ +T K+ + + + + + + + V NYY+ L
Sbjct: 212 QAADKDQAVVLXTTKTKKQNKPKLSFNKXILKKGFPQXVKRLLXTXVVGNYYKAGL 379
>gb|AV531508.1|AV531508 AV531508 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB024e01F 3', mRNA sequence
Length = 521
Score = 109 bits (233), Expect(2) = 1e-029
Identities = 47/82 (57%), Positives = 61/82 (74%)
Frame = -2 / -1
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AAGKD VVL T K K+QN P +KS+++KEF +M+K V NQV N YRPDL K+AL
Sbjct: 389 AAGKDQGVVLGTAKAKRQNKPKLSVNKSILKKEFSRMSKVVANQVVVN*YRPDLKKAALA 210
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 209 RLSAISKGLRVAKSGPKRRNRQ 144
Score = 72.1 bits (151), Expect(2) = 5e-024
Identities = 41/90 (45%), Positives = 45/90 (50%)
Frame = +1 / +1
Query: 304 CLFFFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSF 483
CLF L PDLAT R LSL A +SGL *L+ T T L IL NS DL
Sbjct: 145 CLFLLLGPDLATLRPLLIALSLASAAFFKSGLY*LTTT*LATTLLILENSFLRIDLLTES 324
Query: 484 AGVFCFLVLVVERTTAESFPAAGWIVTVFL 573
G+FC L L V TT S PAA + L
Sbjct: 325 LGLFCLLALAVPSTTPWSLPAA*MVTVFLL 414
Score = 61.6 bits (128), Expect(2) = 5e-024
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +1 / +1
Query: 556 IVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKE 681
+VTVFL AKPE L E L RLL SL+N TLA PLPNCFT+K+
Sbjct: 394 MVTVFLLAKPECLYELMLTRLLLSLLN*TLA*PLPNCFTKKQ 519
Score = 42.8 bits (87), Expect(2) = 1e-029
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -1 / -3
Query: 681 LLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQEN 565
L G+A+ R CQG+V Q QQP Q L+Q LW +Q++
Sbjct: 519 LFLGKAIR*RLCQGSVQQREQQPRQHQLVQALWFGQQKD 403
>gb|AI999535.1|AI999535 701556327 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701556327, mRNA sequence
Length = 616
Score = 108 bits (231), Expect = 2e-022
Identities = 45/78 (57%), Positives = 56/78 (71%)
Frame = -2 / -1
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKK 567
++ EMATVPG IW+IV++NN FLVKQFG GN VQF+KE NL N++SYK+SGLAN
Sbjct: 580 VKELEMATVPGQXIWEIVKRNNXFLVKQFGRGNXXVQFSKESXNLVNINSYKHSGLANXX 401
Query: 566 TVTIQPAAGKDSAVVLST 513
TVTI A V+ +T
Sbjct: 400 TVTIXAAXKDQGVVLGTT 347
Score = 100 bits (214), Expect(2) = 8e-029
Identities = 44/82 (53%), Positives = 55/82 (67%)
Frame = -2 / -1
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD VVL TTKTK+QN P +KS++ KEF M+ V NQV NYY PDL K L
Sbjct: 385 AAXKDQGVVLGTTKTKRQNKPKLSVNKSILXKEFSXMSXXVANQVVXNYYXPDLKKXXLA 206
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + +VAKSG K++ RQ
Sbjct: 205 RLSAISKGXRVAKSGPKRRXRQ 140
Score = 48.7 bits (100), Expect(2) = 8e-029
Identities = 26/59 (44%), Positives = 31/59 (52%)
Frame = -1 / -3
Query: 750 SSPAKGNGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSK 574
SS NG SR L D EE+QL GEA+ R G+V Q QP Q L+Q LW +
Sbjct: 584 SSEGARNGHSSRTVXLGDREEKQLFLGEAIR*R*XXGSVQQREXQPRQHQLVQALWFGQ 408
>gb|AA042137.1|AA042137 24474 CD4-13 Arabidopsis thaliana cDNA clone E2H7T7, mRNA sequence
Length = 587
Score = 129 bits (276), Expect(2) = 1e-028
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 23 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 202
Query: 554 QPAAGKDSAVVLSTTKTKK 498
Q A + V+ +T K+
Sbjct: 203 QAADKDQAVVLATTKTKKQ 259
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1 / +1
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCNDP 553
NGD SR DL D EE+QL GEAV R+ G++ QG QP Q +LLQ LW KQ++C+ P
Sbjct: 25 NGDSSRTIDLGDREEQQLFLGEAVR*RKL*GSIQQGD*QPHQRSLLQALWSCKQKDCDHP 204
Score = 61.1 bits (127), Expect(2) = 3e-023
Identities = 27/46 (58%), Positives = 34/46 (73%)
Frame = -2 / +2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVG 411
AA KD AVVL+TTKTKKQN P +KS+++K F +M+KAV N G
Sbjct: 206 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKGFPRMSKAVANPGG 343
Score = 21.7 bits (41), Expect(2) = 1e-028
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1 / +2
Query: 456 QGVPQDGQGCEKPGWRQLLQA 394
+G P+ + PG QLLQA
Sbjct: 299 KGFPRMSKAVANPGGGQLLQA 361
>gb|BP814878.1|BP814878 BP814878 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-37-C10 5',
mRNA sequence
Length = 391
Score = 126 bits (270), Expect = 8e-028
Identities = 52/78 (66%), Positives = 63/78 (80%)
Frame = -2 / +2
Query: 746 LRRREMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKK 567
++ EMATVPG LIW+IV++NN FLVKQFG GNAKVQF+KE NNL N++SYK+SGLANKK
Sbjct: 95 VKELEMATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKK 274
Query: 566 TVTIQPAAGKDSAVVLST 513
TVTIQ A V+ +T
Sbjct: 275 TVTIQAAGKDQGVVLGTT 328
>gb|BP597676.1|BP597676 BP597676 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-40-H08 3',
mRNA sequence
Length = 424
Score = 125 bits (268), Expect = 2e-027
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = -2 / -2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL
Sbjct: 396 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 217
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 216 RLSAISKGLRVAKSGAKQRNRQ 151
>gb|BE529472.1|BE529472 M74D16STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600038758R1 5', mRNA sequence
Length = 236
Score = 125 bits (267), Expect = 2e-027
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATVPG LIW+IV+ NN FLVKQFG GN+KVQF+KE NNL NVHSYK+SGLANKKTVTI
Sbjct: 35 EMATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 214
Query: 554 QPA 546
Q A
Sbjct: 215 QAA 223
>gb|AV544835.1|AV544835 AV544835 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ60g08F 3', mRNA sequence
Length = 442
Score = 123 bits (263), Expect = 8e-027
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -2 / -2
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K+AL
Sbjct: 429 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 250
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 249 RLSAISKGLRVAKSGPKRRNRQ 184
>gb|AV544976.1|AV544976 AV544976 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ66c10F 3', mRNA sequence
Length = 469
Score = 123 bits (263), Expect = 8e-027
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -2 / -3
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AAGKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K+AL
Sbjct: 410 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 231
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 230 RLSAISKGLRVAKSGPKRRNRQ 165
>gb|BP856131.1|BP856131 BP856131 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-28-P09 5',
mRNA sequence
Length = 404
Score = 111 bits (236), Expect = 4e-023
Identities = 49/113 (43%), Positives = 67/113 (59%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
EMATV G LIW+IV+ N FLVK+FG GN+KVQ +KE NNL N +SYK+SG+ANKKTVT+
Sbjct: 57 EMATVQGQLIWEIVKNKNCFLVKEFGRGNSKVQLSKETNNLTNAYSYKHSGVANKKTVTM 236
Query: 554 QPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYR 396
Q + V+ +T K+ + + ++ R V + Y R
Sbjct: 237 QAGEKDQAVVLATTKTKKQNKPKLSVKKSILKKEFPRMSKAVANQVVDNYYRR 395
Score = 79.9 bits (168), Expect(2) = 9e-027
Identities = 35/60 (58%), Positives = 41/60 (68%)
Frame = -2 / +3
Query: 569 KTVTIQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPD 390
K A KD AVVL+TTKTKKQN P KS+++KEF +M+KAV NQV DNYYR D
Sbjct: 219 KKTVTMQAGEKDQAVVLATTKTKKQNKPKLSVKKSILKKEFPRMSKAVANQVVDNYYRRD 398
Score = 73.9 bits (155), Expect(2) = 2e-022
Identities = 36/57 (63%), Positives = 40/57 (70%)
Frame = +1 / -2
Query: 556 IVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFLTICQIRSPGTV 726
+VTVFLFA PE L*E L RLL SL+N TL PLPN FT+K+ F TI QI P TV
Sbjct: 235 MVTVFLFATPECL*E*ALVRLLVSLLN*TLEFPLPNSFTKKQFLFFTISQINCP*TV 65
Score = 62.9 bits (131), Expect(2) = 9e-027
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = -1 / +2
Query: 732 NGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQVLWLSKQENCN 559
NGD SR DL D EE++L GE V R+ G++ QG QP Q LLQ LW KQ++C+
Sbjct: 59 NGDSSRTIDLGDREEQKLFLGEGVR*REL*GSIKQGD*QPHQRLLLQALWCCKQKDCD 232
Score = 54.2 bits (112), Expect(2) = 2e-022
Identities = 29/54 (53%), Positives = 31/54 (57%)
Frame = +1 / -2
Query: 388 RSGL**LSPTWFFTALAILRNSLRITDLWLSFAGVFCFLVLVVERTTAESFPAA 549
+S L**LS TW TA IL NS D G+FCFLV VV TTA SF A
Sbjct: 400 QSRL**LSTTWLATAFDILGNSFLRIDFLTESLGLFCFLVFVVASTTAWSFSPA 239
>gb|AV819301.1|AV819301 AV819301 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-03-J09 3',
mRNA sequence
Length = 421
Score = 122 bits (262), Expect = 1e-026
Identities = 52/82 (63%), Positives = 66/82 (80%)
Frame = -2 / -1
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
AA KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV D YYRPDL K+AL
Sbjct: 397 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDKYYRPDLKKAALA 218
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 217 RLSAISKGLRVAKSGAKQRNRQ 152
>gb|AV564522.1|AV564522 AV564522 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ205g07F 3', mRNA sequence
Length = 387
Score = 122 bits (261), Expect = 1e-026
Identities = 51/79 (64%), Positives = 65/79 (82%)
Frame = -2 / -3
Query: 539 KDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGRLS 360
KD AVVL+TTKTKKQN P +KS+++KEF +M+KAV NQV DNYYRPDL K+AL RLS
Sbjct: 385 KDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALARLS 206
Query: 359 SVYRSLQVAKSGVKKKNRQ 303
++ + L+VAKSG K++NRQ
Sbjct: 205 AISKGLRVAKSGAKQRNRQ 149
>gb|H37001.1|H37001 15130 Lambda-PRL2 Arabidopsis thaliana cDNA clone 181H5T7, mRNA
sequence
Length = 355
Score = 121 bits (259), Expect = 3e-026
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = -2 / +3
Query: 731 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQ 552
MATVPG LIW+IV+ NN FLVKQFG GN+KVQF+K NNL NVHSYK+SGLANKKTVTIQ
Sbjct: 48 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKXTNNLTNVHSYKHSGLANKKTVTIQ 227
Query: 551 PAAGKDSAVVLST 513
A + V+ +T
Sbjct: 228 AADKDQAVVLGTT 266
>gb|AV788181.1|AV788181 AV788181 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-78-H05 3',
mRNA sequence
Length = 416
Score = 121 bits (259), Expect = 3e-026
Identities = 50/82 (60%), Positives = 64/82 (78%)
Frame = -2 / -3
Query: 548 AAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALG 369
A GKD VVL TTKTK+QN P +KS+++KEF +M+K V NQV DNYYRPDL K+AL
Sbjct: 408 AVGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 229
Query: 368 RLSSVYRSLQVAKSGVKKKNRQ 303
RLS++ + L+VAKSG K++NRQ
Sbjct: 228 RLSAISKGLRVAKSGPKRRNRQ 163
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,688,852,218
Number of Sequences: 1013581
Number of extensions: 23776328
Number of successful extensions: 158556
Number of sequences better than 1.0e-020: 66
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 53183466864
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)