TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.392
(725 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU636327.1|BU636327 049E12 Infected Arabidopsis Leaf Ara... 152 1e-035
gb|AV440712.1|AV440712 AV440712 Arabidopsis thaliana above-... 152 1e-035
gb|AV544535.1|AV544535 AV544535 Arabidopsis thaliana roots ... 152 1e-035
gb|AV552854.1|AV552854 AV552854 Arabidopsis thaliana roots ... 152 1e-035
gb|U66343.1|ATU66343 Arabidopsis thaliana calreticulin (Crt... 152 1e-035
gb|AY062628.1| Arabidopsis thaliana calreticulin (Crt1) (At... 152 1e-035
emb|AX507390.1| Sequence 2085 from Patent WO0216655 152 1e-035
gb|AF083783.1| Arabidopsis thaliana clone sps818 unknown mRNA 152 1e-035
gb|BT008511.1| Arabidopsis thaliana At1g56340 gene, complet... 152 1e-035
ref|NM_104513.2| Arabidopsis thaliana CRT1 (CALRETICULIN 1)... 152 1e-035
ref|NM_001036122.1| Arabidopsis thaliana CRT1 (CALRETICULIN... 152 1e-035
gb|AV540422.1|AV540422 AV540422 Arabidopsis thaliana roots ... 148 2e-034
gb|AI995267.1|AI995267 701503307 A. thaliana, Ohio State cl... 146 8e-034
gb|CF651670.1|CF651670 08-L020361-066-002-P01-SP6P MPIZ-ADI... 146 8e-034
gb|AV440909.1|AV440909 AV440909 Arabidopsis thaliana above-... 146 8e-034
gb|AV520128.1|AV520128 AV520128 Arabidopsis thaliana aboveg... 146 8e-034
gb|U27698.1|ATU27698 Arabidopsis thaliana calreticulin (AtC... 146 8e-034
gb|AY045656.1| Arabidopsis thaliana At1g09210/T12M4_8 mRNA,... 146 8e-034
gb|AY059662.1| Arabidopsis thaliana At1g09210/T12M4_8 mRNA,... 146 8e-034
emb|AX412271.1| Sequence 35 from Patent WO0222675 146 8e-034
emb|AX505492.1| Sequence 187 from Patent WO0216655 146 8e-034
gb|AY086745.1| Arabidopsis thaliana clone 27210 mRNA, compl... 146 8e-034
ref|NM_100791.2| Arabidopsis thaliana calcium ion binding A... 146 8e-034
gb|CF652690.1|CF652690 70-L020830-066-002-P01q-SP6P MPIZ-AD... 144 4e-033
gb|AV442120.1|AV442120 AV442120 Arabidopsis thaliana above-... 144 4e-033
gb|AV552840.1|AV552840 AV552840 Arabidopsis thaliana roots ... 137 3e-031
gb|AA042519.1|AA042519 25112 Lambda-PRL2 Arabidopsis thalia... 134 3e-030
gb|AV538410.1|AV538410 AV538410 Arabidopsis thaliana roots ... 129 8e-029
gb|CF773183.1|CF773183 AG_FSL_14A06 Arabidopsis ag-1 35S:AG... 127 5e-028
gb|CB263392.1|CB263392 23-E8861-008-010-M05-pBl2 MPIZ-ADIS-... 124 2e-027
gb|CB252620.1|CB252620 21-E010931-019-003-I05-T7R MPIZ-ADIS... 124 2e-027
gb|U66345.1|ATU66345 Arabidopsis thaliana calreticulin (Crt... 124 2e-027
gb|AY056320.1| Arabidopsis thaliana putative calreticulin p... 124 2e-027
gb|BT002494.1| Arabidopsis thaliana calreticulin, putative ... 124 2e-027
emb|BX815527.1|CNS0AATS Arabidopsis thaliana Full-length cD... 124 2e-027
emb|BX815781.1|CNS0ACTU Arabidopsis thaliana Full-length cD... 124 2e-027
ref|NM_100718.2| Arabidopsis thaliana CRT3 (CALRETICULIN 3)... 124 2e-027
ref|NM_202064.1| Arabidopsis thaliana CRT3 (CALRETICULIN 3)... 124 2e-027
gb|AV530634.1|AV530634 AV530634 Arabidopsis thaliana flower... 122 1e-026
gb|AV561007.1|AV561007 AV561007 Arabidopsis thaliana green ... 122 1e-026
gb|CB185504.1|CB185504 EST00037 Arabidopsis Salicylic Acid ... 120 4e-026
gb|AV550200.1|AV550200 AV550200 Arabidopsis thaliana roots ... 118 2e-025
gb|CF774084.1|CF774084 AG_FSL_27B07 Arabidopsis ag-1 35S:AG... 116 1e-024
gb|AC058785.8|AC058785 Arabidopsis thaliana chromosome 1 BA... 63 5e-022
gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BA... 63 8e-022
gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T... 59 5e-021
>gb|BU636327.1|BU636327 049E12 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 654
Score = 152 bits (326), Expect = 1e-035
Identities = 54/73 (73%), Positives = 64/73 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP
Sbjct: 280 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPE 459
Query: 189 LAKTFAEETWGKH 227
AK AEETWGKH
Sbjct: 460 YAKKLAEETWGKH 498
>gb|AV440712.1|AV440712 AV440712 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ07b03_f 3', mRNA
sequence
Length = 629
Score = 152 bits (326), Expect = 1e-035
Identities = 54/73 (73%), Positives = 64/73 (87%)
Frame = +3 / -3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP
Sbjct: 552 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPE 373
Query: 189 LAKTFAEETWGKH 227
AK AEETWGKH
Sbjct: 372 YAKKLAEETWGKH 334
>gb|AV544535.1|AV544535 AV544535 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ47a11F 3', mRNA sequence
Length = 660
Score = 152 bits (326), Expect = 1e-035
Identities = 54/73 (73%), Positives = 64/73 (87%)
Frame = +3 / -1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP
Sbjct: 597 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPE 418
Query: 189 LAKTFAEETWGKH 227
AK AEETWGKH
Sbjct: 417 YAKKLAEETWGKH 379
>gb|AV552854.1|AV552854 AV552854 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ47a11R 5', mRNA sequence
Length = 563
Score = 152 bits (326), Expect = 1e-035
Identities = 54/73 (73%), Positives = 64/73 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP
Sbjct: 172 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPE 351
Query: 189 LAKTFAEETWGKH 227
AK AEETWGKH
Sbjct: 352 YAKKLAEETWGKH 390
>gb|U66343.1|ATU66343 Arabidopsis thaliana calreticulin (Crt1) mRNA, complete cds
Length = 1463
Score = 152 bits (326), Expect = 1e-035
Identities = 54/73 (73%), Positives = 64/73 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP
Sbjct: 847 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPE 1026
Query: 189 LAKTFAEETWGKH 227
AK AEETWGKH
Sbjct: 1027 YAKKLAEETWGKH 1065
>gb|AY062628.1| Arabidopsis thaliana calreticulin (Crt1) (At1g56340; F13N6.20) mRNA,
complete cds
Length = 1440
Score = 152 bits (326), Expect = 1e-035
Identities = 54/73 (73%), Positives = 64/73 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP
Sbjct: 871 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPE 1050
Query: 189 LAKTFAEETWGKH 227
AK AEETWGKH
Sbjct: 1051 YAKKLAEETWGKH 1089
>emb|AX507390.1| Sequence 2085 from Patent WO0216655
Length = 1278
Score = 152 bits (326), Expect = 1e-035
Identities = 54/73 (73%), Positives = 64/73 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP
Sbjct: 844 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPE 1023
Query: 189 LAKTFAEETWGKH 227
AK AEETWGKH
Sbjct: 1024 YAKKLAEETWGKH 1062
>gb|AF083783.1| Arabidopsis thaliana clone sps818 unknown mRNA
Length = 1251
Score = 152 bits (326), Expect = 1e-035
Identities = 54/73 (73%), Positives = 64/73 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP
Sbjct: 847 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPE 1026
Query: 189 LAKTFAEETWGKH 227
AK AEETWGKH
Sbjct: 1027 YAKKLAEETWGKH 1065
>gb|BT008511.1| Arabidopsis thaliana At1g56340 gene, complete cds
Length = 1278
Score = 152 bits (326), Expect = 1e-035
Identities = 54/73 (73%), Positives = 64/73 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP
Sbjct: 844 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPE 1023
Query: 189 LAKTFAEETWGKH 227
AK AEETWGKH
Sbjct: 1024 YAKKLAEETWGKH 1062
>ref|NM_104513.2| Arabidopsis thaliana CRT1 (CALRETICULIN 1); calcium ion binding
AT1G56340 (CRT1) transcript variant AT1G56340.1 mRNA,
complete cds
Length = 1492
Score = 152 bits (326), Expect = 1e-035
Identities = 54/73 (73%), Positives = 64/73 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP
Sbjct: 871 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPE 1050
Query: 189 LAKTFAEETWGKH 227
AK AEETWGKH
Sbjct: 1051 YAKKLAEETWGKH 1089
>ref|NM_001036122.1| Arabidopsis thaliana CRT1 (CALRETICULIN 1); calcium ion binding
AT1G56340 (CRT1) transcript variant AT1G56340.2 mRNA,
complete cds
Length = 1444
Score = 152 bits (326), Expect = 1e-035
Identities = 54/73 (73%), Positives = 64/73 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP
Sbjct: 871 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPE 1050
Query: 189 LAKTFAEETWGKH 227
AK AEETWGKH
Sbjct: 1051 YAKKLAEETWGKH 1089
>gb|AV540422.1|AV540422 AV540422 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ150a06F 3', mRNA sequence
Length = 596
Score = 148 bits (317), Expect = 2e-034
Identities = 53/73 (72%), Positives = 63/73 (86%)
Frame = +3 / -3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKN Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP
Sbjct: 591 KKIKNXAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPE 412
Query: 189 LAKTFAEETWGKH 227
AK AEETWGKH
Sbjct: 411 YAKKLAEETWGKH 373
>gb|AI995267.1|AI995267 701503307 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701503307, mRNA sequence
Length = 424
Score = 146 bits (313), Expect = 8e-034
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKW+AP+IDNPDFKDDP +Y F LKY+G+ELWQVKSG+LFDN++I DDP
Sbjct: 143 KQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPD 322
Query: 189 LAKTFAEETWGK 224
AK A+ETWGK
Sbjct: 323 YAKKLADETWGK 358
>gb|CF651670.1|CF651670 08-L020361-066-002-P01-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001P012Q 5-PRIME, mRNA sequence
Length = 757
Score = 146 bits (313), Expect = 8e-034
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKW+AP+IDNPDFKDDP +Y F LKY+G+ELWQVKSG+LFDN++I DDP
Sbjct: 39 KQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPD 218
Query: 189 LAKTFAEETWGK 224
AK A+ETWGK
Sbjct: 219 YAKKLADETWGK 254
>gb|AV440909.1|AV440909 AV440909 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ14a07_f 3', mRNA
sequence
Length = 651
Score = 146 bits (313), Expect = 8e-034
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = +3 / -2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKW+AP+IDNPDFKDDP +Y F LKY+G+ELWQVKSG+LFDN++I DDP
Sbjct: 575 KQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPD 396
Query: 189 LAKTFAEETWGK 224
AK A+ETWGK
Sbjct: 395 YAKKLADETWGK 360
>gb|AV520128.1|AV520128 AV520128 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ07g11F 3', mRNA
sequence
Length = 646
Score = 146 bits (313), Expect = 8e-034
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = +3 / -2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKW+AP+IDNPDFKDDP +Y F LKY+G+ELWQVKSG+LFDN++I DDP
Sbjct: 585 KQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPD 406
Query: 189 LAKTFAEETWGK 224
AK A+ETWGK
Sbjct: 405 YAKKLADETWGK 370
>gb|U27698.1|ATU27698 Arabidopsis thaliana calreticulin (AtCRTL) mRNA, partial cds
Length = 1413
Score = 146 bits (313), Expect = 8e-034
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKW+AP+IDNPDFKDDP +Y F LKY+G+ELWQVKSG+LFDN++I DDP
Sbjct: 799 KQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPD 978
Query: 189 LAKTFAEETWGK 224
AK A+ETWGK
Sbjct: 979 YAKKLADETWGK 1014
>gb|AY045656.1| Arabidopsis thaliana At1g09210/T12M4_8 mRNA, complete cds
Length = 1516
Score = 146 bits (313), Expect = 8e-034
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKW+AP+IDNPDFKDDP +Y F LKY+G+ELWQVKSG+LFDN++I DDP
Sbjct: 886 KQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPD 1065
Query: 189 LAKTFAEETWGK 224
AK A+ETWGK
Sbjct: 1066 YAKKLADETWGK 1101
>gb|AY059662.1| Arabidopsis thaliana At1g09210/T12M4_8 mRNA, complete cds
Length = 1275
Score = 146 bits (313), Expect = 8e-034
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKW+AP+IDNPDFKDDP +Y F LKY+G+ELWQVKSG+LFDN++I DDP
Sbjct: 844 KQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPD 1023
Query: 189 LAKTFAEETWGK 224
AK A+ETWGK
Sbjct: 1024 YAKKLADETWGK 1059
>emb|AX412271.1| Sequence 35 from Patent WO0222675
Length = 1275
Score = 146 bits (313), Expect = 8e-034
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKW+AP+IDNPDFKDDP +Y F LKY+G+ELWQVKSG+LFDN++I DDP
Sbjct: 844 KQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPD 1023
Query: 189 LAKTFAEETWGK 224
AK A+ETWGK
Sbjct: 1024 YAKKLADETWGK 1059
>emb|AX505492.1| Sequence 187 from Patent WO0216655
Length = 1275
Score = 146 bits (313), Expect = 8e-034
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKW+AP+IDNPDFKDDP +Y F LKY+G+ELWQVKSG+LFDN++I DDP
Sbjct: 844 KQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPD 1023
Query: 189 LAKTFAEETWGK 224
AK A+ETWGK
Sbjct: 1024 YAKKLADETWGK 1059
>gb|AY086745.1| Arabidopsis thaliana clone 27210 mRNA, complete sequence
Length = 1532
Score = 146 bits (313), Expect = 8e-034
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKW+AP+IDNPDFKDDP +Y F LKY+G+ELWQVKSG+LFDN++I DDP
Sbjct: 918 KQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPD 1097
Query: 189 LAKTFAEETWGK 224
AK A+ETWGK
Sbjct: 1098 YAKKLADETWGK 1133
>ref|NM_100791.2| Arabidopsis thaliana calcium ion binding AT1G09210 mRNA, complete cds
Length = 1724
Score = 146 bits (313), Expect = 8e-034
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKW+AP+IDNPDFKDDP +Y F LKY+G+ELWQVKSG+LFDN++I DDP
Sbjct: 918 KQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPD 1097
Query: 189 LAKTFAEETWGK 224
AK A+ETWGK
Sbjct: 1098 YAKKLADETWGK 1133
>gb|CF652690.1|CF652690 70-L020830-066-002-P01q-SP6P MPIZ-ADIS-066 Arabidopsis thaliana
cDNA clone MPIZp2001P012Q 5-PRIME, mRNA sequence
Length = 852
Score = 144 bits (308), Expect = 4e-033
Identities = 51/72 (70%), Positives = 62/72 (86%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+I NPNY+GKW+AP+IDNPDFKDDP +Y F LKY+G+ELWQVKSG+LFDN++I DDP
Sbjct: 39 KQINNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPD 218
Query: 189 LAKTFAEETWGK 224
AK A+ETWGK
Sbjct: 219 YAKKLADETWGK 254
>gb|AV442120.1|AV442120 AV442120 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ14a07_r 5', mRNA
sequence
Length = 574
Score = 144 bits (308), Expect = 4e-033
Identities = 51/71 (71%), Positives = 62/71 (87%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKW+AP+IDNPDFKDDP +Y F LKY+G+ELWQVKSG+LFDN++I DDP
Sbjct: 362 KQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPD 541
Query: 189 LAKTFAEETWG 221
AK A+ETWG
Sbjct: 542 YAKKLADETWG 574
>gb|AV552840.1|AV552840 AV552840 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ39g08R 5', mRNA sequence
Length = 489
Score = 137 bits (294), Expect = 3e-031
Identities = 50/72 (69%), Positives = 60/72 (83%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP
Sbjct: 216 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPE 395
Query: 189 LAKTFAEETWGK 224
AK E T GK
Sbjct: 396 YAKELGEGTLGK 431
>gb|AA042519.1|AA042519 25112 Lambda-PRL2 Arabidopsis thaliana cDNA clone 251K15T7, mRNA
sequence
Length = 620
Score = 134 bits (287), Expect = 3e-030
Identities = 49/72 (68%), Positives = 60/72 (83%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKW+AP+IDNPDFKDDP +Y F LKY+G+ELWQVKSG+LFDN++I DDP
Sbjct: 143 KQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPD 322
Query: 189 LAKTFAEETWGK 224
AK A+ GK
Sbjct: 323 YAKKLAD*NMGK 358
>gb|AV538410.1|AV538410 AV538410 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ115h04F 3', mRNA sequence
Length = 578
Score = 129 bits (277), Expect = 8e-029
Identities = 45/62 (72%), Positives = 54/62 (87%)
Frame = +3 / -2
Query: 42 WKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKTFAEETWG 221
WKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP AK AEETWG
Sbjct: 577 WKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPEYAKKLAEETWG 398
Query: 222 KH 227
KH
Sbjct: 397 KH 392
>gb|CF773183.1|CF773183 AG_FSL_14A06 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 14A06, mRNA sequence
Length = 201
Score = 127 bits (271), Expect = 5e-028
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +3 / -3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDP 185
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP
Sbjct: 181 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDP 5
>gb|CB263392.1|CB263392 23-E8861-008-010-M05-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767M0510Q 5-PRIME, mRNA sequence
Length = 510
Score = 124 bits (266), Expect = 2e-027
Identities = 43/73 (58%), Positives = 60/73 (82%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y S+KY GIE+WQVK+G++FDNI+I DDPA
Sbjct: 77 KRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGSIFDNILICDDPA 256
Query: 189 LAKTFAEETWGKH 227
A++ ++ + +H
Sbjct: 257 YARSIVDDYFAQH 295
>gb|CB252620.1|CB252620 21-E010931-019-003-I05-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768I053Q 5-PRIME, mRNA sequence
Length = 478
Score = 124 bits (266), Expect = 2e-027
Identities = 43/73 (58%), Positives = 60/73 (82%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y S+KY GIE+WQVK+G++FDNI+I DDPA
Sbjct: 244 KRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGSIFDNILICDDPA 423
Query: 189 LAKTFAEETWGKH 227
A++ ++ + +H
Sbjct: 424 YARSIVDDYFAQH 462
>gb|U66345.1|ATU66345 Arabidopsis thaliana calreticulin (Crt3) mRNA, complete cds
Length = 1424
Score = 124 bits (266), Expect = 2e-027
Identities = 43/73 (58%), Positives = 60/73 (82%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y S+KY GIE+WQVK+G++FDNI+I DDPA
Sbjct: 884 KRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGSIFDNILICDDPA 1063
Query: 189 LAKTFAEETWGKH 227
A++ ++ + +H
Sbjct: 1064 YARSIVDDYFAQH 1102
>gb|AY056320.1| Arabidopsis thaliana putative calreticulin protein (At1g08450) mRNA,
complete cds
Length = 1462
Score = 124 bits (266), Expect = 2e-027
Identities = 43/73 (58%), Positives = 60/73 (82%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y S+KY GIE+WQVK+G++FDNI+I DDPA
Sbjct: 887 KRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGSIFDNILICDDPA 1066
Query: 189 LAKTFAEETWGKH 227
A++ ++ + +H
Sbjct: 1067 YARSIVDDYFAQH 1105
>gb|BT002494.1| Arabidopsis thaliana calreticulin, putative (At1g08450) mRNA,
complete cds
Length = 1426
Score = 124 bits (266), Expect = 2e-027
Identities = 43/73 (58%), Positives = 60/73 (82%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y S+KY GIE+WQVK+G++FDNI+I DDPA
Sbjct: 887 KRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGSIFDNILICDDPA 1066
Query: 189 LAKTFAEETWGKH 227
A++ ++ + +H
Sbjct: 1067 YARSIVDDYFAQH 1105
>emb|BX815527.1|CNS0AATS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS6ZD12 of Adult vegetative tissue of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1359
Score = 124 bits (266), Expect = 2e-027
Identities = 43/73 (58%), Positives = 60/73 (82%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y S+KY GIE+WQVK+G++FDNI+I DDPA
Sbjct: 874 KRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGSIFDNILICDDPA 1053
Query: 189 LAKTFAEETWGKH 227
A++ ++ + +H
Sbjct: 1054 YARSIVDDYFAQH 1092
>emb|BX815781.1|CNS0ACTU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS93ZH04 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1391
Score = 124 bits (266), Expect = 2e-027
Identities = 43/73 (58%), Positives = 60/73 (82%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y S+KY GIE+WQVK+G++FDNI+I DDPA
Sbjct: 872 KRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGSIFDNILICDDPA 1051
Query: 189 LAKTFAEETWGKH 227
A++ ++ + +H
Sbjct: 1052 YARSIVDDYFAQH 1090
>ref|NM_100718.2| Arabidopsis thaliana CRT3 (CALRETICULIN 3); calcium ion binding
AT1G08450 (CRT3) transcript variant AT1G08450.1 mRNA,
complete cds
Length = 1469
Score = 124 bits (266), Expect = 2e-027
Identities = 43/73 (58%), Positives = 60/73 (82%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y S+KY GIE+WQVK+G++FDNI+I DDPA
Sbjct: 887 KRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGSIFDNILICDDPA 1066
Query: 189 LAKTFAEETWGKH 227
A++ ++ + +H
Sbjct: 1067 YARSIVDDYFAQH 1105
>ref|NM_202064.1| Arabidopsis thaliana CRT3 (CALRETICULIN 3); calcium ion binding
AT1G08450 (CRT3) transcript variant AT1G08450.2 mRNA,
complete cds
Length = 1307
Score = 124 bits (266), Expect = 2e-027
Identities = 43/73 (58%), Positives = 60/73 (82%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K+IKNPNY+GKWK P IDNP+F+DDP +Y S+KY GIE+WQVK+G++FDNI+I DDPA
Sbjct: 725 KRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGSIFDNILICDDPA 904
Query: 189 LAKTFAEETWGKH 227
A++ ++ + +H
Sbjct: 905 YARSIVDDYFAQH 943
>gb|AV530634.1|AV530634 AV530634 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB006e05F 3', mRNA sequence
Length = 544
Score = 122 bits (261), Expect = 1e-026
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +3 / -3
Query: 48 APMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKTFAEETWGKH 227
APMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP AK AEETWGKH
Sbjct: 542 APMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPEYAKKLAEETWGKH 363
>gb|AV561007.1|AV561007 AV561007 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ144c08F 3', mRNA sequence
Length = 575
Score = 122 bits (261), Expect = 1e-026
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +3 / -1
Query: 48 APMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKTFAEETWGKH 227
APMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++DDP AK AEETWGKH
Sbjct: 575 APMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPEYAKKLAEETWGKH 396
>gb|CB185504.1|CB185504 EST00037 Arabidopsis Salicylic Acid Subtracted Library Arabidopsis
thaliana cDNA clone SA1-G2 similar to putative
calreticulin, mRNA sequence
Length = 496
Score = 120 bits (257), Expect = 4e-026
Identities = 42/73 (57%), Positives = 57/73 (78%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
K KNPNY+GKWK P IDNP+F+DDP +Y S+KY GIE+WQVK+G++FDNI+I DDPA
Sbjct: 16 KXXKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGSIFDNILICDDPA 195
Query: 189 LAKTFAEETWGKH 227
A+ ++ + +H
Sbjct: 196 YARNIVDDYFAQH 234
>gb|AV550200.1|AV550200 AV550200 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ109f02R 5', mRNA sequence
Length = 573
Score = 118 bits (252), Expect = 2e-025
Identities = 41/56 (73%), Positives = 51/56 (91%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIIT 176
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQVKSG+LFDN++++
Sbjct: 406 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVS 573
>gb|CF774084.1|CF774084 AG_FSL_27B07 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 27B07, mRNA sequence
Length = 201
Score = 116 bits (247), Expect = 1e-024
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / -3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDP 185
KKIKNP Y+GKWKAPMIDNP+FKDDP +Y F LKY+G+ELWQ SG DN++++DDP
Sbjct: 181 KKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQXXSGXXXDNVLVSDDP 5
>gb|AC058785.8|AC058785 Arabidopsis thaliana chromosome 1 BAC F13N6 genomic sequence,
complete sequence
Length = 90698
Score = 63.4 bits (132), Expect(3) = 5e-022
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +3 / -2
Query: 132 WQVKSGTLFDNIIITDDPALAKTFAEETWGKH 227
W VKSG+LFDN++++DDP AK AEETWGKH
Sbjct: 733 W*VKSGSLFDNVLVSDDPEYAKKLAEETWGKH 638
Score = 49.2 bits (101), Expect(3) = 5e-022
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3 / -2
Query: 69 DFKDDPYIYAFDSLKYIGIELWQV 140
+FKDDP +Y F LKY+G+ELWQV
Sbjct: 880 EFKDDPELYVFPKLKYVGVELWQV 809
Score = 48.3 bits (99), Expect(3) = 5e-022
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3 / -2
Query: 12 KIKNPNYQGKWKAPMIDNP 68
KIKNP Y+GKWKAPMIDNP
Sbjct: 1087 KIKNPAYKGKWKAPMIDNP 1031
>gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BAC F14G9 genomic sequence, complete
sequence
Length = 111481
Score = 63.4 bits (132), Expect(3) = 8e-022
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +3 / +2
Query: 132 WQVKSGTLFDNIIITDDPALAKTFAEETWGKH 227
W VKSG+LFDN++++DDP AK AEETWGKH
Sbjct: 17498 W*VKSGSLFDNVLVSDDPEYAKKLAEETWGKH 17593
Score = 49.2 bits (101), Expect(3) = 8e-022
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3 / +2
Query: 69 DFKDDPYIYAFDSLKYIGIELWQV 140
+FKDDP +Y F LKY+G+ELWQV
Sbjct: 17351 EFKDDPELYVFPKLKYVGVELWQV 17422
Score = 48.3 bits (99), Expect(3) = 8e-022
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3 / +2
Query: 12 KIKNPNYQGKWKAPMIDNP 68
KIKNP Y+GKWKAPMIDNP
Sbjct: 17144 KIKNPAYKGKWKAPMIDNP 17200
>gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 sequence, complete sequence
Length = 59261
Score = 58.8 bits (122), Expect(3) = 5e-021
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +3 / +2
Query: 129 LWQVKSGTLFDNIIITDDPALAKTFAEETWGK 224
L+QVKSG+LFDN++I DDP AK A+ETWGK
Sbjct: 28286 LFQVKSGSLFDNVLICDDPDYAKKLADETWGK 28381
Score = 50.6 bits (104), Expect(3) = 5e-021
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3 / +1
Query: 69 DFKDDPYIYAFDSLKYIGIELWQV 140
DFKDDP +Y F LKY+G+ELWQV
Sbjct: 28141 DFKDDPELYVFPKLKYVGLELWQV 28212
Score = 46.9 bits (96), Expect(3) = 5e-021
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +3 / +1
Query: 12 KIKNPNYQGKWKAPMIDNP 68
+IKNPNY+GKW+AP+IDNP
Sbjct: 27577 QIKNPNYKGKWEAPLIDNP 27633
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,178,598,140
Number of Sequences: 1013581
Number of extensions: 13493300
Number of successful extensions: 128176
Number of sequences better than 1.0e-020: 54
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 45550654490
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)