TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.130
(860 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE039272.1|BE039272 AC01D03 AC Arabidopsis thaliana cDNA... 312 1e-083
gb|AV826432.1|AV826432 AV826432 RAFL8 Arabidopsis thaliana ... 312 1e-083
gb|AV537607.1|AV537607 AV537607 Arabidopsis thaliana roots ... 312 1e-083
gb|AV544220.1|AV544220 AV544220 Arabidopsis thaliana roots ... 312 1e-083
gb|AV549585.1|AV549585 AV549585 Arabidopsis thaliana roots ... 312 1e-083
gb|AY050966.1| Arabidopsis thaliana putative ribosomal prot... 312 1e-083
gb|AY096616.1| Arabidopsis thaliana putative ribosomal prot... 312 1e-083
gb|AY085630.1| Arabidopsis thaliana clone 164 mRNA, complet... 312 1e-083
ref|NM_120988.2| Arabidopsis thaliana structural constituen... 312 1e-083
gb|AV553671.1|AV553671 AV553671 Arabidopsis thaliana roots ... 310 3e-083
gb|AV784120.1|AV784120 AV784120 RAFL5 Arabidopsis thaliana ... 309 8e-083
gb|AV823191.1|AV823191 AV823191 RAFL5 Arabidopsis thaliana ... 309 8e-083
gb|CA781266.1|CA781266 014B04AF Infected Arabidopsis Leaf A... 309 8e-083
gb|AV544758.1|AV544758 AV544758 Arabidopsis thaliana roots ... 309 8e-083
gb|AV553255.1|AV553255 AV553255 Arabidopsis thaliana roots ... 309 8e-083
gb|AY048221.1| Arabidopsis thaliana At1g04270/F19P19_29 mRN... 309 8e-083
gb|AY091703.1| Arabidopsis thaliana At1g04270/F19P19_29 mRN... 309 8e-083
emb|BX817406.1|CNS0ACK0 Arabidopsis thaliana Full-length cD... 309 8e-083
emb|Z23161.1|ATRBPS15A A.thaliana ribosomal protein S15 mRN... 309 8e-083
ref|NM_100308.2| Arabidopsis thaliana RPS15 (RIBOSOMAL PROT... 309 8e-083
emb|X91962.1|AT40SRS15 A.thaliana mRNA for 40S ribosomal pr... 308 2e-082
gb|BE037545.1|BE037545 AA01A06 AA Arabidopsis thaliana cDNA... 307 3e-082
gb|BE038613.1|BE038613 AB01H05 AB Arabidopsis thaliana cDNA... 307 3e-082
gb|BE038861.1|BE038861 AB05B09 AB Arabidopsis thaliana cDNA... 303 5e-081
ref|NM_120987.2| Arabidopsis thaliana structural constituen... 301 2e-080
gb|AU235816.1|AU235816 AU235816 RAFL14 Arabidopsis thaliana... 301 2e-080
gb|BT010135.1| Arabidopsis thaliana At5g09500 gene, complet... 301 2e-080
gb|AV538711.1|AV538711 AV538711 Arabidopsis thaliana roots ... 299 6e-080
gb|AV538084.1|AV538084 AV538084 Arabidopsis thaliana roots ... 295 2e-078
ref|NM_123730.1| Arabidopsis thaliana structural constituen... 292 7e-078
gb|AY086958.1| Arabidopsis thaliana clone 29963 mRNA, compl... 292 1e-077
ref|NM_120986.2| Arabidopsis thaliana structural constituen... 292 1e-077
ref|NM_001035879.1| Arabidopsis thaliana RPS15 (RIBOSOMAL P... 194 2e-077
gb|BE038827.1|BE038827 AB04G03 AB Arabidopsis thaliana cDNA... 273 1e-076
emb|Z23162.1|ATRBPS15B A.thaliana H1flk-3 gene, 3' end, and... 195 4e-072
gb|AV536604.1|AV536604 AV536604 Arabidopsis thaliana liquid... 268 2e-070
gb|AV545466.1|AV545466 AV545466 Arabidopsis thaliana roots ... 265 1e-069
emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5... 198 2e-069
gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsi... 195 5e-069
gb|AV553829.1|AV553829 AV553829 Arabidopsis thaliana roots ... 218 8e-068
gb|AV565619.1|AV565619 AV565619 Arabidopsis thaliana green ... 253 4e-066
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 195 8e-065
gb|N37540.1|N37540 18767 Lambda-PRL2 Arabidopsis thaliana c... 249 9e-065
gb|BP582590.1|BP582590 BP582590 RAFL14 Arabidopsis thaliana... 246 6e-064
gb|BP619574.1|BP619574 BP619574 RAFL16 Arabidopsis thaliana... 246 6e-064
dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosom... 184 7e-064
gb|AW004145.1|AW004145 701500185 A. thaliana, Ohio State cl... 201 1e-062
gb|AV532062.1|AV532062 AV532062 Arabidopsis thaliana flower... 237 4e-061
gb|BP594448.1|BP594448 BP594448 RAFL15 Arabidopsis thaliana... 223 3e-060
gb|BP618355.1|BP618355 BP618355 RAFL16 Arabidopsis thaliana... 160 3e-060
gb|AA712740.1|AA712740 32299 Lambda-PRL2 Arabidopsis thalia... 210 6e-060
gb|BP584508.1|BP584508 BP584508 RAFL14 Arabidopsis thaliana... 228 2e-058
gb|BE038972.1|BE038972 AB07H11 AB Arabidopsis thaliana cDNA... 226 7e-058
gb|T21856.1|T21856 3864 Lambda-PRL2 Arabidopsis thaliana cD... 223 7e-057
gb|BP607962.1|BP607962 BP607962 RAFL16 Arabidopsis thaliana... 220 5e-056
gb|BP571507.1|BP571507 BP571507 RAFL14 Arabidopsis thaliana... 214 4e-054
gb|BP593823.1|BP593823 BP593823 RAFL15 Arabidopsis thaliana... 211 2e-053
gb|BP836703.1|BP836703 BP836703 RAFL19 Arabidopsis thaliana... 210 7e-053
gb|AV530843.1|AV530843 AV530843 Arabidopsis thaliana flower... 208 2e-052
gb|AA597749.1|AA597749 29333 Lambda-PRL2 Arabidopsis thalia... 207 3e-052
gb|BP855680.1|BP855680 BP855680 RAFL21 Arabidopsis thaliana... 207 5e-052
gb|BP646287.1|BP646287 BP646287 RAFL19 Arabidopsis thaliana... 147 2e-051
gb|BP854001.1|BP854001 BP854001 RAFL21 Arabidopsis thaliana... 202 2e-050
gb|BP570282.1|BP570282 BP570282 RAFL14 Arabidopsis thaliana... 193 2e-050
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 198 7e-050
dbj|AB008265.1| Arabidopsis thaliana genomic DNA, chromosom... 118 7e-050
gb|DQ056736.1| Arabidopsis thaliana putative 40S ribosomal ... 118 8e-050
ref|NM_125701.1| Arabidopsis thaliana structural constituen... 118 8e-050
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 198 2e-049
gb|BP787497.1|BP787497 BP787497 RAFL7 Arabidopsis thaliana ... 197 4e-049
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 195 1e-048
gb|AA713022.1|AA713022 32584 Lambda-PRL2 Arabidopsis thalia... 193 5e-048
gb|BP642003.1|BP642003 BP642003 RAFL19 Arabidopsis thaliana... 193 5e-048
gb|BP853164.1|BP853164 BP853164 RAFL21 Arabidopsis thaliana... 95 8e-048
gb|BP853893.1|BP853893 BP853893 RAFL21 Arabidopsis thaliana... 191 2e-047
gb|BP563336.1|BP563336 BP563336 RAFL14 Arabidopsis thaliana... 191 3e-047
gb|BP597545.1|BP597545 BP597545 RAFL15 Arabidopsis thaliana... 190 6e-047
gb|BP595618.1|BP595618 BP595618 RAFL15 Arabidopsis thaliana... 189 1e-046
gb|BP789183.1|BP789183 BP789183 RAFL7 Arabidopsis thaliana ... 189 1e-046
gb|BZ292978.1|BZ292978 SALK_129050.48.35.x Arabidopsis thal... 106 2e-046
gb|BP844146.1|BP844146 BP844146 RAFL21 Arabidopsis thaliana... 188 3e-046
gb|R29788.1|R29788 12393 Lambda-PRL2 Arabidopsis thaliana c... 187 5e-046
gb|BP812124.1|BP812124 BP812124 RAFL19 Arabidopsis thaliana... 187 5e-046
gb|BP840222.1|BP840222 BP840222 RAFL19 Arabidopsis thaliana... 187 5e-046
gb|BP640396.1|BP640396 BP640396 RAFL19 Arabidopsis thaliana... 112 1e-045
gb|AU226581.1|AU226581 AU226581 RAFL14 Arabidopsis thaliana... 124 1e-045
gb|BP799430.1|BP799430 BP799430 RAFL14 Arabidopsis thaliana... 170 1e-045
gb|BP583991.1|BP583991 BP583991 RAFL14 Arabidopsis thaliana... 184 3e-045
gb|BP638304.1|BP638304 BP638304 RAFL19 Arabidopsis thaliana... 184 3e-045
emb|AJ553533.1|ATH553533 Arabidopsis thaliana T-DNA flankin... 184 3e-045
gb|AQ956828.1|AQ956828 LERAM31TF LERA Arabidopsis thaliana ... 183 7e-045
gb|BP865592.1|BP865592 BP865592 RAFL21 Arabidopsis thaliana... 183 7e-045
gb|BP827322.1|BP827322 BP827322 RAFL19 Arabidopsis thaliana... 119 4e-044
gb|BP849184.1|BP849184 BP849184 RAFL21 Arabidopsis thaliana... 177 6e-044
gb|N65110.1|N65110 20150 Lambda-PRL2 Arabidopsis thaliana c... 153 1e-043
gb|AQ956829.1|AQ956829 LERAM31TR LERA Arabidopsis thaliana ... 178 2e-043
gb|BP566550.1|BP566550 BP566550 RAFL14 Arabidopsis thaliana... 178 2e-043
gb|BP566825.1|BP566825 BP566825 RAFL14 Arabidopsis thaliana... 178 2e-043
gb|CB260534.1|CB260534 87-E9572-012-004-N21-T7R MPIZ-ADIS-0... 176 8e-043
gb|BP671919.1|BP671919 BP671919 RAFL21 Arabidopsis thaliana... 155 1e-042
gb|BP654930.1|BP654930 BP654930 RAFL19 Arabidopsis thaliana... 175 2e-042
gb|AV550232.1|AV550232 AV550232 Arabidopsis thaliana roots ... 174 3e-042
gb|BH251399.1|BH251399 SALK_011527 Arabidopsis thaliana TDN... 151 1e-041
gb|BP799546.1|BP799546 BP799546 RAFL14 Arabidopsis thaliana... 129 1e-041
gb|BP815278.1|BP815278 BP815278 RAFL19 Arabidopsis thaliana... 153 1e-041
gb|BP799355.1|BP799355 BP799355 RAFL14 Arabidopsis thaliana... 161 2e-041
gb|BP856362.1|BP856362 BP856362 RAFL21 Arabidopsis thaliana... 170 5e-041
gb|AV552702.1|AV552702 AV552702 Arabidopsis thaliana roots ... 169 1e-040
gb|BP861190.1|BP861190 BP861190 RAFL21 Arabidopsis thaliana... 168 2e-040
gb|BP644772.1|BP644772 BP644772 RAFL19 Arabidopsis thaliana... 149 3e-040
gb|BP815011.1|BP815011 BP815011 RAFL19 Arabidopsis thaliana... 120 3e-040
gb|BP642920.1|BP642920 BP642920 RAFL19 Arabidopsis thaliana... 166 6e-040
gb|BP590157.1|BP590157 BP590157 RAFL15 Arabidopsis thaliana... 98 2e-039
gb|AV551020.1|AV551020 AV551020 Arabidopsis thaliana roots ... 165 2e-039
gb|BP797747.1|BP797747 BP797747 RAFL14 Arabidopsis thaliana... 165 2e-039
gb|BP832293.1|BP832293 BP832293 RAFL19 Arabidopsis thaliana... 165 2e-039
gb|BP647548.1|BP647548 BP647548 RAFL19 Arabidopsis thaliana... 101 3e-039
gb|BP818160.1|BP818160 BP818160 RAFL19 Arabidopsis thaliana... 142 1e-038
gb|BP803741.1|BP803741 BP803741 RAFL14 Arabidopsis thaliana... 116 1e-038
gb|R30026.1|R30026 12631 Lambda-PRL2 Arabidopsis thaliana c... 143 2e-038
gb|BP650819.1|BP650819 BP650819 RAFL19 Arabidopsis thaliana... 161 2e-038
gb|BP651032.1|BP651032 BP651032 RAFL19 Arabidopsis thaliana... 161 3e-038
gb|BP663835.1|BP663835 BP663835 RAFL21 Arabidopsis thaliana... 161 3e-038
gb|BP644385.1|BP644385 BP644385 RAFL19 Arabidopsis thaliana... 133 3e-038
gb|BP822296.1|BP822296 BP822296 RAFL19 Arabidopsis thaliana... 159 1e-037
gb|BP632732.1|BP632732 BP632732 RAFL17 Arabidopsis thaliana... 158 2e-037
gb|BP855126.1|BP855126 BP855126 RAFL21 Arabidopsis thaliana... 112 2e-037
gb|BP564615.1|BP564615 BP564615 RAFL14 Arabidopsis thaliana... 158 3e-037
gb|BP644028.1|BP644028 BP644028 RAFL19 Arabidopsis thaliana... 158 3e-037
gb|BP638880.1|BP638880 BP638880 RAFL19 Arabidopsis thaliana... 157 4e-037
gb|BP844755.1|BP844755 BP844755 RAFL21 Arabidopsis thaliana... 156 7e-037
gb|AV535553.1|AV535553 AV535553 Arabidopsis thaliana flower... 156 9e-037
gb|AV536598.1|AV536598 AV536598 Arabidopsis thaliana liquid... 156 9e-037
gb|BP592451.1|BP592451 BP592451 RAFL15 Arabidopsis thaliana... 156 9e-037
gb|BP858904.1|BP858904 BP858904 RAFL21 Arabidopsis thaliana... 100 1e-036
gb|BP564344.1|BP564344 BP564344 RAFL14 Arabidopsis thaliana... 110 2e-036
gb|BP815140.1|BP815140 BP815140 RAFL19 Arabidopsis thaliana... 154 5e-036
gb|BP648711.1|BP648711 BP648711 RAFL19 Arabidopsis thaliana... 153 6e-036
gb|AV814593.1|AV814593 AV814593 RAFL9 Arabidopsis thaliana ... 153 9e-036
gb|BP805620.1|BP805620 BP805620 RAFL16 Arabidopsis thaliana... 77 1e-035
gb|AV790069.1|AV790069 AV790069 RAFL6 Arabidopsis thaliana ... 150 4e-035
gb|BP623778.1|BP623778 BP623778 RAFL17 Arabidopsis thaliana... 150 4e-035
gb|BP624306.1|BP624306 BP624306 RAFL17 Arabidopsis thaliana... 150 4e-035
gb|BP632135.1|BP632135 BP632135 RAFL17 Arabidopsis thaliana... 150 4e-035
gb|BP577470.1|BP577470 BP577470 RAFL14 Arabidopsis thaliana... 149 2e-034
gb|BP639587.1|BP639587 BP639587 RAFL19 Arabidopsis thaliana... 149 2e-034
gb|BP656135.1|BP656135 BP656135 RAFL19 Arabidopsis thaliana... 114 2e-034
gb|BP626011.1|BP626011 BP626011 RAFL17 Arabidopsis thaliana... 141 2e-034
gb|AV787809.1|AV787809 AV787809 RAFL6 Arabidopsis thaliana ... 145 2e-033
gb|BP630049.1|BP630049 BP630049 RAFL17 Arabidopsis thaliana... 145 2e-033
gb|BP869065.1|BP869065 BP869065 RAFL21 Arabidopsis thaliana... 144 3e-033
gb|BP657150.1|BP657150 BP657150 RAFL19 Arabidopsis thaliana... 114 4e-033
gb|BP648892.1|BP648892 BP648892 RAFL19 Arabidopsis thaliana... 122 4e-033
gb|BP797475.1|BP797475 BP797475 RAFL14 Arabidopsis thaliana... 105 4e-033
gb|N37263.1|N37263 18490 Lambda-PRL2 Arabidopsis thaliana c... 143 7e-033
gb|BP577273.1|BP577273 BP577273 RAFL14 Arabidopsis thaliana... 137 1e-032
gb|BP829369.1|BP829369 BP829369 RAFL19 Arabidopsis thaliana... 102 2e-032
gb|BP669875.1|BP669875 BP669875 RAFL21 Arabidopsis thaliana... 104 5e-032
gb|BP670504.1|BP670504 BP670504 RAFL21 Arabidopsis thaliana... 114 8e-032
gb|AV794154.1|AV794154 AV794154 RAFL8 Arabidopsis thaliana ... 84 2e-031
gb|BP569334.1|BP569334 BP569334 RAFL14 Arabidopsis thaliana... 94 2e-031
gb|BP625067.1|BP625067 BP625067 RAFL17 Arabidopsis thaliana... 128 4e-031
gb|BP592430.1|BP592430 BP592430 RAFL15 Arabidopsis thaliana... 55 5e-031
gb|BZ769940.1|BZ769940 SALK_142874.53.50.x Arabidopsis thal... 135 2e-030
gb|AV535648.1|AV535648 AV535648 Arabidopsis thaliana flower... 134 3e-030
gb|BP849172.1|BP849172 BP849172 RAFL21 Arabidopsis thaliana... 81 3e-030
gb|BP815658.1|BP815658 BP815658 RAFL19 Arabidopsis thaliana... 110 3e-030
gb|BP581489.1|BP581489 BP581489 RAFL14 Arabidopsis thaliana... 86 5e-029
gb|BP628741.1|BP628741 BP628741 RAFL17 Arabidopsis thaliana... 114 1e-028
gb|BP637705.1|BP637705 BP637705 RAFL19 Arabidopsis thaliana... 100 1e-027
gb|AV533902.1|AV533902 AV533902 Arabidopsis thaliana flower... 125 2e-027
gb|AV559935.1|AV559935 AV559935 Arabidopsis thaliana green ... 124 4e-027
gb|BP802394.1|BP802394 BP802394 RAFL14 Arabidopsis thaliana... 124 4e-027
gb|BP831675.1|BP831675 BP831675 RAFL19 Arabidopsis thaliana... 71 6e-027
gb|BP596175.1|BP596175 BP596175 RAFL15 Arabidopsis thaliana... 73 8e-027
emb|AL755805.1| Arabidopsis thaliana T-DNA flanking sequenc... 120 5e-026
gb|Z17791.1|Z17791 ATTS0365 Gif-SeedA+B Arabidopsis thalian... 120 7e-026
gb|CB261315.1|CB261315 08-E9573-012-004-P02-T7R MPIZ-ADIS-0... 120 7e-026
gb|CB261515.1|CB261515 32-E020823-012-004-P02q-T7R MPIZ-ADI... 120 7e-026
emb|AL755807.1| Arabidopsis thaliana T-DNA flanking sequenc... 119 1e-025
gb|BP831621.1|BP831621 BP831621 RAFL19 Arabidopsis thaliana... 92 4e-025
gb|T44160.1|T44160 7423 Lambda-PRL2 Arabidopsis thaliana cD... 117 5e-025
gb|BP826413.1|BP826413 BP826413 RAFL19 Arabidopsis thaliana... 101 7e-024
emb|CR360807.1| Arabidopsis thaliana T-DNA flanking sequenc... 111 2e-023
gb|BH214207.1|BH214207 SALK_010406 Arabidopsis thaliana TDN... 80 2e-023
ref|NM_103107.1| Arabidopsis thaliana structural constituen... 110 6e-023
gb|BZ761659.1|BZ761659 SALK_074986.53.30.x Arabidopsis thal... 89 6e-023
gb|BP802157.1|BP802157 BP802157 RAFL14 Arabidopsis thaliana... 106 8e-023
gb|CD531488.1|CD531488 10P20 Arabidopsis Leaf Senescence Li... 109 1e-022
gb|BP832815.1|BP832815 BP832815 RAFL19 Arabidopsis thaliana... 70 4e-022
emb|AL823727.1| Arabidopsis thaliana transposon insertion S... 92 5e-022
emb|CR360808.1| Arabidopsis thaliana T-DNA flanking sequenc... 105 1e-021
emb|AL083094.1|CNS00OE0 Arabidopsis thaliana genome survey ... 91 4e-021
>gb|BE039272.1|BE039272 AC01D03 AC Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 726
Score = 312 bits (675), Expect = 1e-083
Identities = 128/149 (85%), Positives = 141/149 (94%)
Frame = +3 / +2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 77 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 256
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 257 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 436
Query: 480 YKPVKHGRPGIGATHSSRFIPLK*AGTRL 566
YKPVKHGRPG+GATHSSRFIPLK* R+
Sbjct: 437 YKPVKHGRPGVGATHSSRFIPLK*RPYRV 523
Score = 204 bits (440), Expect = 3e-051
Identities = 95/138 (68%), Positives = 99/138 (71%)
Frame = -2 / -1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 507 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 328
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 327 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 148
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 147 RRASRSTPLKANFLNVLF 94
Score = 163 bits (351), Expect = 6e-039
Identities = 73/143 (51%), Positives = 98/143 (68%)
Frame = -1 / -3
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
SS +R++P GVG T+ P VL+ LV DGEL KV+++HLRLDL+LVE L++V TN+ASNH
Sbjct: 511 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 332
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGH 195
R NDHV ++ W LLTS + FRLA+FL++ H L Q+ EPS EELD+++ H
Sbjct: 331 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 152
Query: 194 VEKRI*VDAAVAVLAERPLLGSS 126
VEK I +D+ ER LL +S
Sbjct: 151 VEKSIEIDSFEGEFLERSLLWNS 83
Score = 142 bits (305), Expect(2) = 2e-033
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = +2 / +1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVHXXXXXXXXXXXQEKVPEGSEEEAHGAHQETAQGEK 307
SS+EE+V +++L C+SRHV+ +KV +E+A+G ET QGEK
Sbjct: 85 SSKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEK 264
Query: 308 GCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLLQA 487
+ W*EA S++ HDHC *+DWKH WC+Q +D QP DQA*DD LPC VLHL+QA
Sbjct: 265 RGTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQA 444
Query: 488 GQARQARYRCHPLLAVYSSEMSWYSAL 568
AR A C+PLL V+ S++ +L
Sbjct: 445 S*AR*AWRWCYPLLQVHPSQVKTIQSL 525
Score = 22.6 bits (43), Expect(2) = 2e-033
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 56 DVEPEVAAAGVPKK 97
>gb|AV826432.1|AV826432 AV826432 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-15-A10 5',
mRNA sequence
Length = 630
Score = 312 bits (675), Expect = 1e-083
Identities = 128/149 (85%), Positives = 141/149 (94%)
Frame = +3 / +3
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 108 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 287
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 288 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 467
Query: 480 YKPVKHGRPGIGATHSSRFIPLK*AGTRL 566
YKPVKHGRPG+GATHSSRFIPLK* R+
Sbjct: 468 YKPVKHGRPGVGATHSSRFIPLK*RPYRV 554
Score = 204 bits (440), Expect = 3e-051
Identities = 95/138 (68%), Positives = 99/138 (71%)
Frame = -2 / -3
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 538 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 359
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 358 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 179
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 178 RRASRSTPLKANFLNVLF 125
Score = 163 bits (351), Expect = 6e-039
Identities = 73/143 (51%), Positives = 98/143 (68%)
Frame = -1 / -2
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
SS +R++P GVG T+ P VL+ LV DGEL KV+++HLRLDL+LVE L++V TN+ASNH
Sbjct: 542 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 363
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGH 195
R NDHV ++ W LLTS + FRLA+FL++ H L Q+ EPS EELD+++ H
Sbjct: 362 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 183
Query: 194 VEKRI*VDAAVAVLAERPLLGSS 126
VEK I +D+ ER LL +S
Sbjct: 182 VEKSIEIDSFEGEFLERSLLWNS 114
Score = 142 bits (305), Expect(2) = 2e-033
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = +2 / +2
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVHXXXXXXXXXXXQEKVPEGSEEEAHGAHQETAQGEK 307
SS+EE+V +++L C+SRHV+ +KV +E+A+G ET QGEK
Sbjct: 116 SSKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEK 295
Query: 308 GCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLLQA 487
+ W*EA S++ HDHC *+DWKH WC+Q +D QP DQA*DD LPC VLHL+QA
Sbjct: 296 RGTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQA 475
Query: 488 GQARQARYRCHPLLAVYSSEMSWYSAL 568
AR A C+PLL V+ S++ +L
Sbjct: 476 S*AR*AWRWCYPLLQVHPSQVKTIQSL 556
Score = 22.6 bits (43), Expect(2) = 2e-033
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 87 DVEPEVAAAGVPKK 128
>gb|AV537607.1|AV537607 AV537607 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09f04F 3', mRNA sequence
Length = 602
Score = 312 bits (675), Expect = 1e-083
Identities = 128/149 (85%), Positives = 141/149 (94%)
Frame = +3 / -1
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 590 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 411
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 410 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 231
Query: 480 YKPVKHGRPGIGATHSSRFIPLK*AGTRL 566
YKPVKHGRPG+GATHSSRFIPLK* R+
Sbjct: 230 YKPVKHGRPGVGATHSSRFIPLK*RPYRV 144
Score = 204 bits (440), Expect = 3e-051
Identities = 95/138 (68%), Positives = 99/138 (71%)
Frame = -2 / +1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 160 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 339
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 340 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 519
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 520 RRASRSTPLKANFLNVLF 573
Score = 163 bits (351), Expect = 6e-039
Identities = 73/143 (51%), Positives = 98/143 (68%)
Frame = -1 / +3
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
SS +R++P GVG T+ P VL+ LV DGEL KV+++HLRLDL+LVE L++V TN+ASNH
Sbjct: 156 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 335
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGH 195
R NDHV ++ W LLTS + FRLA+FL++ H L Q+ EPS EELD+++ H
Sbjct: 336 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 515
Query: 194 VEKRI*VDAAVAVLAERPLLGSS 126
VEK I +D+ ER LL +S
Sbjct: 516 VEKSIEIDSFEGEFLERSLLWNS 584
Score = 142 bits (305), Expect = 1e-032
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = +2 / -3
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVHXXXXXXXXXXXQEKVPEGSEEEAHGAHQETAQGEK 307
SS+EE+V +++L C+SRHV+ +KV +E+A+G ET QGEK
Sbjct: 582 SSKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEK 403
Query: 308 GCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLLQA 487
+ W*EA S++ HDHC *+DWKH WC+Q +D QP DQA*DD LPC VLHL+QA
Sbjct: 402 RGTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQA 223
Query: 488 GQARQARYRCHPLLAVYSSEMSWYSAL 568
AR A C+PLL V+ S++ +L
Sbjct: 222 S*AR*AWRWCYPLLQVHPSQVKTIQSL 142
>gb|AV544220.1|AV544220 AV544220 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ36d04F 3', mRNA sequence
Length = 658
Score = 312 bits (675), Expect = 1e-083
Identities = 128/149 (85%), Positives = 141/149 (94%)
Frame = +3 / -3
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 614 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 435
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 434 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 255
Query: 480 YKPVKHGRPGIGATHSSRFIPLK*AGTRL 566
YKPVKHGRPG+GATHSSRFIPLK* R+
Sbjct: 254 YKPVKHGRPGVGATHSSRFIPLK*RPYRV 168
Score = 204 bits (440), Expect = 3e-051
Identities = 95/138 (68%), Positives = 99/138 (71%)
Frame = -2 / +1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 184 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 363
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 364 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 543
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 544 RRASRSTPLKANFLNVLF 597
Score = 163 bits (351), Expect = 6e-039
Identities = 73/143 (51%), Positives = 98/143 (68%)
Frame = -1 / +3
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
SS +R++P GVG T+ P VL+ LV DGEL KV+++HLRLDL+LVE L++V TN+ASNH
Sbjct: 180 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 359
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGH 195
R NDHV ++ W LLTS + FRLA+FL++ H L Q+ EPS EELD+++ H
Sbjct: 360 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 539
Query: 194 VEKRI*VDAAVAVLAERPLLGSS 126
VEK I +D+ ER LL +S
Sbjct: 540 VEKSIEIDSFEGEFLERSLLWNS 608
Score = 142 bits (305), Expect(2) = 2e-033
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = +2 / -2
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVHXXXXXXXXXXXQEKVPEGSEEEAHGAHQETAQGEK 307
SS+EE+V +++L C+SRHV+ +KV +E+A+G ET QGEK
Sbjct: 606 SSKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEK 427
Query: 308 GCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLLQA 487
+ W*EA S++ HDHC *+DWKH WC+Q +D QP DQA*DD LPC VLHL+QA
Sbjct: 426 RGTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQA 247
Query: 488 GQARQARYRCHPLLAVYSSEMSWYSAL 568
AR A C+PLL V+ S++ +L
Sbjct: 246 S*AR*AWRWCYPLLQVHPSQVKTIQSL 166
Score = 22.6 bits (43), Expect(2) = 2e-033
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / -3
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 635 DVEPEVAAAGVPKK 594
>gb|AV549585.1|AV549585 AV549585 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09f04R 5', mRNA sequence
Length = 562
Score = 312 bits (675), Expect = 1e-083
Identities = 128/149 (85%), Positives = 141/149 (94%)
Frame = +3 / +1
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 73 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 252
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 253 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 432
Query: 480 YKPVKHGRPGIGATHSSRFIPLK*AGTRL 566
YKPVKHGRPG+GATHSSRFIPLK* R+
Sbjct: 433 YKPVKHGRPGVGATHSSRFIPLK*RPYRV 519
Score = 204 bits (440), Expect = 3e-051
Identities = 95/138 (68%), Positives = 99/138 (71%)
Frame = -2 / -3
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 503 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 324
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 323 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 144
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 143 RRASRSTPLKANFLNVLF 90
Score = 163 bits (351), Expect = 6e-039
Identities = 73/143 (51%), Positives = 98/143 (68%)
Frame = -1 / -2
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
SS +R++P GVG T+ P VL+ LV DGEL KV+++HLRLDL+LVE L++V TN+ASNH
Sbjct: 507 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 328
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGH 195
R NDHV ++ W LLTS + FRLA+FL++ H L Q+ EPS EELD+++ H
Sbjct: 327 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 148
Query: 194 VEKRI*VDAAVAVLAERPLLGSS 126
VEK I +D+ ER LL +S
Sbjct: 147 VEKSIEIDSFEGEFLERSLLWNS 79
Score = 142 bits (305), Expect(2) = 2e-033
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = +2 / +3
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVHXXXXXXXXXXXQEKVPEGSEEEAHGAHQETAQGEK 307
SS+EE+V +++L C+SRHV+ +KV +E+A+G ET QGEK
Sbjct: 81 SSKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEK 260
Query: 308 GCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLLQA 487
+ W*EA S++ HDHC *+DWKH WC+Q +D QP DQA*DD LPC VLHL+QA
Sbjct: 261 RGTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQA 440
Query: 488 GQARQARYRCHPLLAVYSSEMSWYSAL 568
AR A C+PLL V+ S++ +L
Sbjct: 441 S*AR*AWRWCYPLLQVHPSQVKTIQSL 521
Score = 22.6 bits (43), Expect(2) = 2e-033
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 52 DVEPEVAAAGVPKK 93
>gb|AY050966.1| Arabidopsis thaliana putative ribosomal protein S15 (At5g09510)
mRNA, complete cds
Length = 1160
Score = 312 bits (675), Expect = 1e-083
Identities = 128/149 (85%), Positives = 141/149 (94%)
Frame = +3 / +2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 107 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 286
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 287 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 466
Query: 480 YKPVKHGRPGIGATHSSRFIPLK*AGTRL 566
YKPVKHGRPG+GATHSSRFIPLK* R+
Sbjct: 467 YKPVKHGRPGVGATHSSRFIPLK*RPYRV 553
Score = 204 bits (440), Expect = 3e-051
Identities = 95/138 (68%), Positives = 99/138 (71%)
Frame = -2 / -3
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 537 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 358
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 357 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 178
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 177 RRASRSTPLKANFLNVLF 124
Score = 163 bits (351), Expect = 6e-039
Identities = 73/143 (51%), Positives = 98/143 (68%)
Frame = -1 / -2
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
SS +R++P GVG T+ P VL+ LV DGEL KV+++HLRLDL+LVE L++V TN+ASNH
Sbjct: 541 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 362
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGH 195
R NDHV ++ W LLTS + FRLA+FL++ H L Q+ EPS EELD+++ H
Sbjct: 361 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 182
Query: 194 VEKRI*VDAAVAVLAERPLLGSS 126
VEK I +D+ ER LL +S
Sbjct: 181 VEKSIEIDSFEGEFLERSLLWNS 113
Score = 142 bits (305), Expect(2) = 2e-033
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = +2 / +1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVHXXXXXXXXXXXQEKVPEGSEEEAHGAHQETAQGEK 307
SS+EE+V +++L C+SRHV+ +KV +E+A+G ET QGEK
Sbjct: 115 SSKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEK 294
Query: 308 GCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLLQA 487
+ W*EA S++ HDHC *+DWKH WC+Q +D QP DQA*DD LPC VLHL+QA
Sbjct: 295 RGTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQA 474
Query: 488 GQARQARYRCHPLLAVYSSEMSWYSAL 568
AR A C+PLL V+ S++ +L
Sbjct: 475 S*AR*AWRWCYPLLQVHPSQVKTIQSL 555
Score = 22.6 bits (43), Expect(2) = 2e-033
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 86 DVEPEVAAAGVPKK 127
>gb|AY096616.1| Arabidopsis thaliana putative ribosomal protein S15 (AT5g09510)
mRNA, complete cds
Length = 490
Score = 312 bits (675), Expect = 1e-083
Identities = 128/149 (85%), Positives = 141/149 (94%)
Frame = +3 / +1
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 28 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 207
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 208 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 387
Query: 480 YKPVKHGRPGIGATHSSRFIPLK*AGTRL 566
YKPVKHGRPG+GATHSSRFIPLK* R+
Sbjct: 388 YKPVKHGRPGVGATHSSRFIPLK*RPYRV 474
Score = 204 bits (440), Expect = 3e-051
Identities = 95/138 (68%), Positives = 99/138 (71%)
Frame = -2 / -3
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 458 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 279
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 278 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 99
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 98 RRASRSTPLKANFLNVLF 45
Score = 163 bits (351), Expect = 6e-039
Identities = 73/143 (51%), Positives = 98/143 (68%)
Frame = -1 / -2
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
SS +R++P GVG T+ P VL+ LV DGEL KV+++HLRLDL+LVE L++V TN+ASNH
Sbjct: 462 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 283
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGH 195
R NDHV ++ W LLTS + FRLA+FL++ H L Q+ EPS EELD+++ H
Sbjct: 282 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 103
Query: 194 VEKRI*VDAAVAVLAERPLLGSS 126
VEK I +D+ ER LL +S
Sbjct: 102 VEKSIEIDSFEGEFLERSLLWNS 34
Score = 142 bits (305), Expect(2) = 2e-033
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = +2 / +3
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVHXXXXXXXXXXXQEKVPEGSEEEAHGAHQETAQGEK 307
SS+EE+V +++L C+SRHV+ +KV +E+A+G ET QGEK
Sbjct: 36 SSKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEK 215
Query: 308 GCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLLQA 487
+ W*EA S++ HDHC *+DWKH WC+Q +D QP DQA*DD LPC VLHL+QA
Sbjct: 216 RGTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQA 395
Query: 488 GQARQARYRCHPLLAVYSSEMSWYSAL 568
AR A C+PLL V+ S++ +L
Sbjct: 396 S*AR*AWRWCYPLLQVHPSQVKTIQSL 476
Score = 22.6 bits (43), Expect(2) = 2e-033
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 7 DVEPEVAAAGVPKK 48
>gb|AY085630.1| Arabidopsis thaliana clone 164 mRNA, complete sequence
Length = 753
Score = 312 bits (675), Expect = 1e-083
Identities = 128/149 (85%), Positives = 141/149 (94%)
Frame = +3 / +3
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 147 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 326
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 327 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 506
Query: 480 YKPVKHGRPGIGATHSSRFIPLK*AGTRL 566
YKPVKHGRPG+GATHSSRFIPLK* R+
Sbjct: 507 YKPVKHGRPGVGATHSSRFIPLK*RPYRV 593
Score = 204 bits (440), Expect = 3e-051
Identities = 95/138 (68%), Positives = 99/138 (71%)
Frame = -2 / -3
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 577 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 398
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 397 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 218
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 217 RRASRSTPLKANFLNVLF 164
Score = 163 bits (351), Expect = 6e-039
Identities = 73/143 (51%), Positives = 98/143 (68%)
Frame = -1 / -2
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
SS +R++P GVG T+ P VL+ LV DGEL KV+++HLRLDL+LVE L++V TN+ASNH
Sbjct: 581 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 402
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGH 195
R NDHV ++ W LLTS + FRLA+FL++ H L Q+ EPS EELD+++ H
Sbjct: 401 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 222
Query: 194 VEKRI*VDAAVAVLAERPLLGSS 126
VEK I +D+ ER LL +S
Sbjct: 221 VEKSIEIDSFEGEFLERSLLWNS 153
Score = 142 bits (305), Expect(2) = 2e-033
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = +2 / +2
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVHXXXXXXXXXXXQEKVPEGSEEEAHGAHQETAQGEK 307
SS+EE+V +++L C+SRHV+ +KV +E+A+G ET QGEK
Sbjct: 155 SSKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEK 334
Query: 308 GCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLLQA 487
+ W*EA S++ HDHC *+DWKH WC+Q +D QP DQA*DD LPC VLHL+QA
Sbjct: 335 RGTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQA 514
Query: 488 GQARQARYRCHPLLAVYSSEMSWYSAL 568
AR A C+PLL V+ S++ +L
Sbjct: 515 S*AR*AWRWCYPLLQVHPSQVKTIQSL 595
Score = 22.6 bits (43), Expect(2) = 2e-033
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 126 DVEPEVAAAGVPKK 167
>ref|NM_120988.2| Arabidopsis thaliana structural constituent of ribosome AT5G09510
mRNA, complete cds
Length = 1163
Score = 312 bits (675), Expect = 1e-083
Identities = 128/149 (85%), Positives = 141/149 (94%)
Frame = +3 / +3
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 147 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 326
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 327 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 506
Query: 480 YKPVKHGRPGIGATHSSRFIPLK*AGTRL 566
YKPVKHGRPG+GATHSSRFIPLK* R+
Sbjct: 507 YKPVKHGRPGVGATHSSRFIPLK*RPYRV 593
Score = 204 bits (440), Expect = 3e-051
Identities = 95/138 (68%), Positives = 99/138 (71%)
Frame = -2 / -2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 577 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 398
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 397 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 218
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 217 RRASRSTPLKANFLNVLF 164
Score = 163 bits (351), Expect = 6e-039
Identities = 73/143 (51%), Positives = 98/143 (68%)
Frame = -1 / -1
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
SS +R++P GVG T+ P VL+ LV DGEL KV+++HLRLDL+LVE L++V TN+ASNH
Sbjct: 581 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 402
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGH 195
R NDHV ++ W LLTS + FRLA+FL++ H L Q+ EPS EELD+++ H
Sbjct: 401 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 222
Query: 194 VEKRI*VDAAVAVLAERPLLGSS 126
VEK I +D+ ER LL +S
Sbjct: 221 VEKSIEIDSFEGEFLERSLLWNS 153
Score = 142 bits (305), Expect(2) = 2e-033
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = +2 / +2
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVHXXXXXXXXXXXQEKVPEGSEEEAHGAHQETAQGEK 307
SS+EE+V +++L C+SRHV+ +KV +E+A+G ET QGEK
Sbjct: 155 SSKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEK 334
Query: 308 GCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLLQA 487
+ W*EA S++ HDHC *+DWKH WC+Q +D QP DQA*DD LPC VLHL+QA
Sbjct: 335 RGTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQA 514
Query: 488 GQARQARYRCHPLLAVYSSEMSWYSAL 568
AR A C+PLL V+ S++ +L
Sbjct: 515 S*AR*AWRWCYPLLQVHPSQVKTIQSL 595
Score = 22.6 bits (43), Expect(2) = 2e-033
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 126 DVEPEVAAAGVPKK 167
>gb|AV553671.1|AV553671 AV553671 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ69c07R 5', mRNA sequence
Length = 544
Score = 310 bits (672), Expect = 3e-083
Identities = 127/149 (85%), Positives = 141/149 (94%)
Frame = +3 / +2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 89 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 268
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 269 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 448
Query: 480 YKPVKHGRPGIGATHSSRFIPLK*AGTRL 566
YKPVKHGRPG+GATHSS+FIPLK* R+
Sbjct: 449 YKPVKHGRPGVGATHSSKFIPLK*RPYRV 535
Score = 204 bits (440), Expect = 3e-051
Identities = 95/138 (68%), Positives = 99/138 (71%)
Frame = -2 / -2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 519 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 340
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 339 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 160
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 159 RRASRSTPLKANFLNVLF 106
Score = 159 bits (341), Expect = 1e-037
Identities = 72/143 (50%), Positives = 97/143 (67%)
Frame = -1 / -1
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
SS +R++ GVG T+ P VL+ LV DGEL KV+++HLRLDL+LVE L++V TN+ASNH
Sbjct: 523 SSLERDELGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 344
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGH 195
R NDHV ++ W LLTS + FRLA+FL++ H L Q+ EPS EELD+++ H
Sbjct: 343 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 164
Query: 194 VEKRI*VDAAVAVLAERPLLGSS 126
VEK I +D+ ER LL +S
Sbjct: 163 VEKSIEIDSFEGEFLERSLLWNS 95
Score = 142 bits (305), Expect(2) = 2e-033
Identities = 67/147 (45%), Positives = 90/147 (61%)
Frame = +2 / +1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVHXXXXXXXXXXXQEKVPEGSEEEAHGAHQETAQGEK 307
SS+EE+V +++L C+SRHV+ +KV +E+A+G ET QGEK
Sbjct: 97 SSKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEK 276
Query: 308 GCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLLQA 487
+ W*EA S++ HDHC *+DWKH WC+Q +D QP DQA*DD LPC VLHL+QA
Sbjct: 277 RGTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQA 456
Query: 488 GQARQARYRCHPLLAVYSSEMSWYSAL 568
AR A C+PLL V+ S++ +L
Sbjct: 457 S*AR*AWRWCYPLLQVHPSQVKTIQSL 537
Score = 22.6 bits (43), Expect(2) = 2e-033
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 68 DVEPEVAAAGVPKK 109
>gb|AV784120.1|AV784120 AV784120 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-16-H14 3',
mRNA sequence
Length = 683
Score = 309 bits (669), Expect = 8e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / -1
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 611 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 432
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 431 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 252
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 251 YKPVKHGRPGVGATHSSRFIPLK* 180
Score = 197 bits (424), Expect = 5e-049
Identities = 92/139 (66%), Positives = 98/139 (70%)
Frame = -2 / +1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 181 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 360
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 361 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 540
Query: 190 XXXXXSTPR*LYLRNVLFL 134
STP NVLFL
Sbjct: 541 RRASRSTPLKANFLNVLFL 597
Score = 167 bits (359), Expect = 5e-040
Identities = 75/145 (51%), Positives = 99/145 (68%)
Frame = -1 / +3
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 180 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 359
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 360 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 539
Query: 191 EKRI*VDAAVAVLAERPLLGSSGGN 117
EK I +++ L +RPLLG+S +
Sbjct: 540 EKSIEINSFEGKLLKRPLLGNSSSS 614
Score = 111 bits (238), Expect(3) = 2e-027
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 471 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 292
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 291 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 190
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 603 SSQEEDV*EVCLQRS*SRCSSRYVY 529
Score = 22.6 bits (43), Expect(3) = 2e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / -1
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 632 DVEPEVAAAGVPKK 591
>gb|AV823191.1|AV823191 AV823191 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-16-H14 5',
mRNA sequence
Length = 649
Score = 309 bits (669), Expect = 8e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +3
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 120 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 299
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 300 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 480 YKPVKHGRPGVGATHSSRFIPLK* 551
Score = 197 bits (424), Expect = 5e-049
Identities = 92/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 550 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 371
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 370 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 191
Query: 190 XXXXXSTPR*LYLRNVLFL 134
STP NVLFL
Sbjct: 190 RRASRSTPLKANFLNVLFL 134
Score = 167 bits (359), Expect = 5e-040
Identities = 75/145 (51%), Positives = 99/145 (68%)
Frame = -1 / -3
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 551 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 372
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 371 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 192
Query: 191 EKRI*VDAAVAVLAERPLLGSSGGN 117
EK I +++ L +RPLLG+S +
Sbjct: 191 EKSIEINSFEGKLLKRPLLGNSSSS 117
Score = 111 bits (238), Expect(3) = 2e-027
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / +2
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 260 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 439
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 440 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 541
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +2
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 128 SSQEEDV*EVCLQRS*SRCSSRYVY 202
Score = 22.6 bits (43), Expect(3) = 2e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 99 DVEPEVAAAGVPKK 140
>gb|CA781266.1|CA781266 014B04AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 665
Score = 309 bits (669), Expect = 8e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 68 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 247
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 248 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 427
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 428 YKPVKHGRPGVGATHSSRFIPLK* 499
Score = 197 bits (424), Expect = 5e-049
Identities = 92/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -3
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 498 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 319
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 318 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 139
Query: 190 XXXXXSTPR*LYLRNVLFL 134
STP NVLFL
Sbjct: 138 RRASRSTPLKANFLNVLFL 82
Score = 167 bits (359), Expect = 5e-040
Identities = 75/145 (51%), Positives = 99/145 (68%)
Frame = -1 / -2
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 499 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 320
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 319 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 140
Query: 191 EKRI*VDAAVAVLAERPLLGSSGGN 117
EK I +++ L +RPLLG+S +
Sbjct: 139 EKSIEINSFEGKLLKRPLLGNSSSS 65
Score = 111 bits (238), Expect(3) = 2e-027
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / +1
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 208 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 387
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 388 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 489
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 76 SSQEEDV*EVCLQRS*SRCSSRYVY 150
Score = 22.6 bits (43), Expect(3) = 2e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 47 DVEPEVAAAGVPKK 88
>gb|AV544758.1|AV544758 AV544758 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ58c02F 3', mRNA sequence
Length = 651
Score = 309 bits (669), Expect = 8e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / -2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 608 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 429
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 428 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 249
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 248 YKPVKHGRPGVGATHSSRFIPLK* 177
Score = 197 bits (424), Expect = 5e-049
Identities = 92/139 (66%), Positives = 98/139 (70%)
Frame = -2 / +1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 178 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 357
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 358 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 537
Query: 190 XXXXXSTPR*LYLRNVLFL 134
STP NVLFL
Sbjct: 538 RRASRSTPLKANFLNVLFL 594
Score = 167 bits (359), Expect = 5e-040
Identities = 75/145 (51%), Positives = 99/145 (68%)
Frame = -1 / +3
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 177 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 356
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 357 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 536
Query: 191 EKRI*VDAAVAVLAERPLLGSSGGN 117
EK I +++ L +RPLLG+S +
Sbjct: 537 EKSIEINSFEGKLLKRPLLGNSSSS 611
Score = 111 bits (238), Expect(3) = 2e-027
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / -1
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 468 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 289
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 288 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 187
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / -1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 600 SSQEEDV*EVCLQRS*SRCSSRYVY 526
Score = 22.6 bits (43), Expect(3) = 2e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / -2
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 629 DVEPEVAAAGVPKK 588
>gb|AV553255.1|AV553255 AV553255 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ58c02R 5', mRNA sequence
Length = 575
Score = 309 bits (669), Expect = 8e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +1
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 88 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 267
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 268 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 447
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 448 YKPVKHGRPGVGATHSSRFIPLK* 519
Score = 197 bits (424), Expect = 5e-049
Identities = 92/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 518 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 339
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 338 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 159
Query: 190 XXXXXSTPR*LYLRNVLFL 134
STP NVLFL
Sbjct: 158 RRASRSTPLKANFLNVLFL 102
Score = 167 bits (359), Expect = 5e-040
Identities = 75/145 (51%), Positives = 99/145 (68%)
Frame = -1 / -3
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 519 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 340
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 339 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 160
Query: 191 EKRI*VDAAVAVLAERPLLGSSGGN 117
EK I +++ L +RPLLG+S +
Sbjct: 159 EKSIEINSFEGKLLKRPLLGNSSSS 85
Score = 111 bits (238), Expect(3) = 2e-027
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / +3
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 228 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 407
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 408 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 509
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +3
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 96 SSQEEDV*EVCLQRS*SRCSSRYVY 170
Score = 22.6 bits (43), Expect(3) = 2e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 67 DVEPEVAAAGVPKK 108
>gb|AY048221.1| Arabidopsis thaliana At1g04270/F19P19_29 mRNA, complete cds
Length = 729
Score = 309 bits (669), Expect = 8e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 119 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 298
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 299 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 478
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 479 YKPVKHGRPGVGATHSSRFIPLK* 550
Score = 197 bits (424), Expect = 5e-049
Identities = 92/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 549 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 370
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 369 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 190
Query: 190 XXXXXSTPR*LYLRNVLFL 134
STP NVLFL
Sbjct: 189 RRASRSTPLKANFLNVLFL 133
Score = 167 bits (359), Expect = 5e-040
Identities = 75/145 (51%), Positives = 99/145 (68%)
Frame = -1 / -3
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 550 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 371
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 370 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 191
Query: 191 EKRI*VDAAVAVLAERPLLGSSGGN 117
EK I +++ L +RPLLG+S +
Sbjct: 190 EKSIEINSFEGKLLKRPLLGNSSSS 116
Score = 111 bits (238), Expect(3) = 2e-027
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / +1
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 259 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 438
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 439 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 540
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 127 SSQEEDV*EVCLQRS*SRCSSRYVY 201
Score = 22.6 bits (43), Expect(3) = 2e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 98 DVEPEVAAAGVPKK 139
>gb|AY091703.1| Arabidopsis thaliana At1g04270/F19P19_29 mRNA, complete cds
Length = 459
Score = 309 bits (669), Expect = 8e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +1
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 28 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 207
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 208 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 387
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 388 YKPVKHGRPGVGATHSSRFIPLK* 459
Score = 197 bits (424), Expect = 5e-049
Identities = 92/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 458 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 279
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 278 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 99
Query: 190 XXXXXSTPR*LYLRNVLFL 134
STP NVLFL
Sbjct: 98 RRASRSTPLKANFLNVLFL 42
Score = 167 bits (359), Expect = 5e-040
Identities = 75/145 (51%), Positives = 99/145 (68%)
Frame = -1 / -1
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 459 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 280
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 279 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 100
Query: 191 EKRI*VDAAVAVLAERPLLGSSGGN 117
EK I +++ L +RPLLG+S +
Sbjct: 99 EKSIEINSFEGKLLKRPLLGNSSSS 25
Score = 111 bits (238), Expect(3) = 2e-027
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / +3
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 168 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 347
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 348 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 449
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +3
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 36 SSQEEDV*EVCLQRS*SRCSSRYVY 110
Score = 22.6 bits (43), Expect(3) = 2e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 7 DVEPEVAAAGVPKK 48
>emb|BX817406.1|CNS0ACK0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL20ZD06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 695
Score = 309 bits (669), Expect = 8e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 83 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 262
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 263 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 442
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 443 YKPVKHGRPGVGATHSSRFIPLK* 514
Score = 197 bits (424), Expect = 5e-049
Identities = 92/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -3
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 513 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 334
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 333 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 154
Query: 190 XXXXXSTPR*LYLRNVLFL 134
STP NVLFL
Sbjct: 153 RRASRSTPLKANFLNVLFL 97
Score = 167 bits (359), Expect = 5e-040
Identities = 75/145 (51%), Positives = 99/145 (68%)
Frame = -1 / -2
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 514 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 335
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 334 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 155
Query: 191 EKRI*VDAAVAVLAERPLLGSSGGN 117
EK I +++ L +RPLLG+S +
Sbjct: 154 EKSIEINSFEGKLLKRPLLGNSSSS 80
Score = 111 bits (238), Expect(3) = 2e-027
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / +1
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 223 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 402
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 403 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 504
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 91 SSQEEDV*EVCLQRS*SRCSSRYVY 165
Score = 22.6 bits (43), Expect(3) = 2e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 62 DVEPEVAAAGVPKK 103
>emb|Z23161.1|ATRBPS15A A.thaliana ribosomal protein S15 mRNA, complete CDS
Length = 668
Score = 309 bits (669), Expect = 8e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +3
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 57 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 236
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 237 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 416
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 417 YKPVKHGRPGVGATHSSRFIPLK* 488
Score = 197 bits (424), Expect = 5e-049
Identities = 92/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 487 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 308
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 307 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 128
Query: 190 XXXXXSTPR*LYLRNVLFL 134
STP NVLFL
Sbjct: 127 RRASRSTPLKANFLNVLFL 71
Score = 167 bits (359), Expect = 5e-040
Identities = 75/145 (51%), Positives = 99/145 (68%)
Frame = -1 / -1
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 488 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 309
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 308 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 129
Query: 191 EKRI*VDAAVAVLAERPLLGSSGGN 117
EK I +++ L +RPLLG+S +
Sbjct: 128 EKSIEINSFEGKLLKRPLLGNSSSS 54
Score = 111 bits (238), Expect(3) = 2e-027
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / +2
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 197 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 376
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 377 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 478
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +2
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 65 SSQEEDV*EVCLQRS*SRCSSRYVY 139
Score = 22.6 bits (43), Expect(3) = 2e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 36 DVEPEVAAAGVPKK 77
>ref|NM_100308.2| Arabidopsis thaliana RPS15 (RIBOSOMAL PROTEIN S15); structural
constituent of ribosome AT1G04270 (RPS15) transcript
variant AT1G04270.1 mRNA, complete cds
Length = 798
Score = 309 bits (669), Expect = 8e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = +3 / +2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 119 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 298
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 299 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 478
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 479 YKPVKHGRPGVGATHSSRFIPLK* 550
Score = 197 bits (424), Expect = 5e-049
Identities = 92/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 549 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 370
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 369 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 190
Query: 190 XXXXXSTPR*LYLRNVLFL 134
STP NVLFL
Sbjct: 189 RRASRSTPLKANFLNVLFL 133
Score = 167 bits (359), Expect = 5e-040
Identities = 75/145 (51%), Positives = 99/145 (68%)
Frame = -1 / -3
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 550 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 371
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 370 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 191
Query: 191 EKRI*VDAAVAVLAERPLLGSSGGN 117
EK I +++ L +RPLLG+S +
Sbjct: 190 EKSIEINSFEGKLLKRPLLGNSSSS 116
Score = 111 bits (238), Expect(3) = 2e-027
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / +1
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 259 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 438
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 439 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 540
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 127 SSQEEDV*EVCLQRS*SRCSSRYVY 201
Score = 22.6 bits (43), Expect(3) = 2e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 98 DVEPEVAAAGVPKK 139
>emb|X91962.1|AT40SRS15 A.thaliana mRNA for 40S ribosomal protein S15
Length = 694
Score = 308 bits (666), Expect = 2e-082
Identities = 125/144 (86%), Positives = 138/144 (95%)
Frame = +3 / +2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 89 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 268
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMII+PEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 269 AKREAPQGEKPEPVRTHLRNMIILPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 448
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 449 YKPVKHGRPGVGATHSSRFIPLK* 520
Score = 196 bits (423), Expect = 7e-049
Identities = 92/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL*TP MLPIISG
Sbjct: 519 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPL*TPMMLPIISG 340
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
MIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 339 RMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 160
Query: 190 XXXXXSTPR*LYLRNVLFL 134
STP NVLFL
Sbjct: 159 RRASRSTPLKANFLNVLFL 103
Score = 166 bits (357), Expect = 9e-040
Identities = 74/142 (52%), Positives = 99/142 (69%)
Frame = -1 / -1
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV+TN+A+NH R
Sbjct: 520 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVNTNDAANHFR 341
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
++DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 340 EDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSSNTRREELDKIISRHI 161
Query: 191 EKRI*VDAAVAVLAERPLLGSS 126
EK I +++ L +RPLLG+S
Sbjct: 160 EKSIEINSFEGKLLKRPLLGNS 95
Score = 116 bits (247), Expect(3) = 1e-028
Identities = 52/94 (55%), Positives = 68/94 (72%)
Frame = +2 / +1
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DW+H WCLQR+D QPG*DQA
Sbjct: 229 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHPP*NDWQHHWCLQRKDFQPG*DQA 408
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 409 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 510
Score = 28.6 bits (56), Expect(3) = 1e-028
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 97 SSQEEDV*EVCLQRS*SRCSSRYVY 171
Score = 22.6 bits (43), Expect(3) = 1e-028
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 68 DVEPEVAAAGVPKK 109
>gb|BE037545.1|BE037545 AA01A06 AA Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 758
Score = 307 bits (665), Expect = 3e-082
Identities = 125/144 (86%), Positives = 137/144 (95%)
Frame = +3 / +3
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 123 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 302
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 303 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 482
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GATHS RFIPLK*
Sbjct: 483 YKPVKHGRPGVGATHSXRFIPLK* 554
Score = 194 bits (418), Expect = 3e-048
Identities = 91/139 (65%), Positives = 97/139 (69%)
Frame = -2 / -2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 553 HLRGMNLXEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 374
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 373 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 194
Query: 190 XXXXXSTPR*LYLRNVLFL 134
STP NVLFL
Sbjct: 193 RRASRSTPLKANFLNVLFL 137
Score = 167 bits (360), Expect = 3e-040
Identities = 75/145 (51%), Positives = 99/145 (68%)
Frame = -1 / -1
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 554 SLKGNESXRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 375
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 374 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 195
Query: 191 EKRI*VDAAVAVLAERPLLGSSGGN 117
EK I +++ L +RPLLG+S +
Sbjct: 194 EKSIEINSFEGKLLKRPLLGNSSSS 120
Score = 111 bits (237), Expect(3) = 2e-027
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / +2
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 263 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 442
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 443 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLXQIHS 544
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +2
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 131 SSQEEDV*EVCLQRS*SRCSSRYVY 205
Score = 22.6 bits (43), Expect(3) = 2e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 102 DVEPEVAAAGVPKK 143
>gb|BE038613.1|BE038613 AB01H05 AB Arabidopsis thaliana cDNA 5' similar to ribosomal
protein s15, mRNA sequence
Length = 709
Score = 307 bits (665), Expect = 3e-082
Identities = 126/144 (87%), Positives = 137/144 (95%)
Frame = +3 / +2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K +++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 83 AAGVPKKRTFKKLAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 262
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 263 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 442
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 443 YKPVKHGRPGVGATHSSRFIPLK* 514
Score = 197 bits (424), Expect = 5e-049
Identities = 92/139 (66%), Positives = 98/139 (70%)
Frame = -2 / -2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 513 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 334
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 333 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 154
Query: 190 XXXXXSTPR*LYLRNVLFL 134
STP NVLFL
Sbjct: 153 RRASRSTPLKASFLNVLFL 97
Score = 167 bits (359), Expect = 5e-040
Identities = 75/145 (51%), Positives = 99/145 (68%)
Frame = -1 / -1
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 514 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 335
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 334 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 155
Query: 191 EKRI*VDAAVAVLAERPLLGSSGGN 117
EK I +++ L +RPLLG+S +
Sbjct: 154 EKSIEINSFEGKLLKRPLLGNSSSS 80
Score = 111 bits (238), Expect(3) = 6e-027
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / +1
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 223 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 402
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 403 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 504
Score = 26.7 bits (52), Expect(3) = 6e-027
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV + L C+SR+V+
Sbjct: 91 SSQEEDV*EACLQRS*SRCSSRYVY 165
Score = 22.6 bits (43), Expect(3) = 6e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 62 DVEPEVAAAGVPKK 103
>gb|BE038861.1|BE038861 AB05B09 AB Arabidopsis thaliana cDNA 5' similar to ribosomal
protein s15, mRNA sequence
Length = 725
Score = 303 bits (656), Expect = 5e-081
Identities = 124/149 (83%), Positives = 138/149 (92%)
Frame = +3 / +1
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 97 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 276
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++APAGEKP+P +THLRNMIIVPEMIGSI+GVYNGKT NQVEIKPEMIGHYLAEFSIS
Sbjct: 277 AKREAPAGEKPDPARTHLRNMIIVPEMIGSIIGVYNGKTLNQVEIKPEMIGHYLAEFSIS 456
Query: 480 YKPVKHGRPGIGATHSSRFIPLK*AGTRL 566
YKPVKHG PG+GATHSSRFIPLK* R+
Sbjct: 457 YKPVKHGTPGVGATHSSRFIPLK*RPYRV 543
Score = 199 bits (428), Expect = 1e-049
Identities = 92/138 (66%), Positives = 98/138 (71%)
Frame = -2 / -1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PG+PCLTGL EMENSAR* PIISGLISTWL+V PL TP MLPIISG
Sbjct: 527 HLRGMNLEEWVAPTPGVPCLTGLYEMENSAR*CPIISGLISTWLRVFPLYTPMMLPIISG 348
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VL GSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 347 TMIMFLKWVLAGSGFSPAGASLFALRSFLIRAIGFLVNPLENLLRIREEKSLTRSSVDMS 168
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 167 RRASRSTPLKANFLNVLF 114
Score = 160 bits (343), Expect = 7e-038
Identities = 72/143 (50%), Positives = 98/143 (68%)
Frame = -1 / -3
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
SS +R++P GVG T+ VL+ LV DGEL KV+++HLRLDL+LVE L++V TN+ASNH
Sbjct: 531 SSLERDEPGGVGSTNARRTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 352
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGH 195
R NDHV ++ W+ LLTS + FRLA+FL++ H L Q+ EPS EELD+++ H
Sbjct: 351 RHNDHVPQVGSRWIWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 172
Query: 194 VEKRI*VDAAVAVLAERPLLGSS 126
VEK I +D+ ER LL +S
Sbjct: 171 VEKSIEIDSFEGEFLERSLLWNS 103
Score = 144 bits (310), Expect(2) = 4e-034
Identities = 67/147 (45%), Positives = 92/147 (62%)
Frame = +2 / +3
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVHXXXXXXXXXXXQEKVPEGSEEEAHGAHQETAQGEK 307
SS+EE+V +++L C+SRHV+ +KV +E+A+G+ ET QGEK
Sbjct: 105 SSKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGSD*ETPQGEK 284
Query: 308 GCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLLQA 487
+ W*EA +S++ HDHC *+DWKH WC+Q +D QP DQA*DD LPC VLHL+QA
Sbjct: 285 RGTSW*EARSSENPLEEHDHCA*NDWKHHWCVQWKDSQPSGDQA*DDWTLPCRVLHLVQA 464
Query: 488 GQARQARYRCHPLLAVYSSEMSWYSAL 568
AR A C+PLL V+ S++ +L
Sbjct: 465 S*ARYAWRWCYPLLQVHPSQVKTIQSL 545
Score = 22.6 bits (43), Expect(2) = 4e-034
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 76 DVEPEVAAAGVPKK 117
>ref|NM_120987.2| Arabidopsis thaliana structural constituent of ribosome AT5G09500
mRNA, complete cds
Length = 652
Score = 301 bits (652), Expect = 2e-080
Identities = 127/151 (84%), Positives = 139/151 (92%)
Frame = +3 / +3
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG KKRTF+K+S+RGVDLDALLDMSTDDLV+LFP+R RRRF RGL RKPMALIKKLRK
Sbjct: 90 AAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRK 269
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK +APAGEKP V+THLRNMIIVPEMIGS++GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 270 AKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 449
Query: 480 YKPVKHGRPGIGATHSSRFIPLK*AGTRLFS 572
YKPVKHGRPG+GAT+SSRFIPLK* L+S
Sbjct: 450 YKPVKHGRPGVGATNSSRFIPLK*IIKLLWS 542
Score = 194 bits (418), Expect = 3e-048
Identities = 92/138 (66%), Positives = 97/138 (70%)
Frame = -2 / -1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RGIN EE VAP PGLPCLTGL E+ENSA+* PIISGLISTWLKV PL*TP LPIISG
Sbjct: 520 HLRGINLEELVAPTPGLPCLTGLYEIENSAK*CPIISGLISTWLKVFPL*TPMTLPIISG 341
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM R VLT +GFSPAGAS FA RSFL+ A+GFL PL NLL R GKS T
Sbjct: 340 TMIMFLRWVLTAAGFSPAGASIFAFRSFLIKAIGFLVNPLENLLRIREGKSLTRSSVDMS 161
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 160 RRASRSTPLKENFLNVLF 107
Score = 84.0 bits (177), Expect(2) = 2e-028
Identities = 33/65 (50%), Positives = 52/65 (80%)
Frame = -1 / -3
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S +R+K G+G T+T P +L+RL+ D +LS+V+++HL DL+LV+ L++V+T++ASNH R
Sbjct: 521 SLERDKSGGIGSTNTRPTMLNRLI*D*KLSQVMSNHLWFDLDLVKSLSIVNTDDASNHFR 342
Query: 371 DNDHV 357
NDHV
Sbjct: 341 HNDHV 327
Score = 64.8 bits (135), Expect(2) = 2e-028
Identities = 31/68 (45%), Positives = 41/68 (60%)
Frame = -1 / -3
Query: 329 LLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHVEKRI*VDAAVAVLA 150
LL+S FR QFLD+ H LP Q+ EPS E+LD+++S HVEK I +D++ L
Sbjct: 299 LLSSWCFNFRFPQFLDQSHRLPRQSSREPSTDTGREKLDKIISRHVEKSIKIDSSEGKLF 120
Query: 149 ERPLLGSS 126
ER L S
Sbjct: 119 ERSLFYDS 96
>gb|AU235816.1|AU235816 AU235816 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-46-M02 5',
mRNA sequence
Length = 597
Score = 301 bits (651), Expect = 2e-080
Identities = 125/144 (86%), Positives = 136/144 (94%)
Frame = +3 / +1
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG KKRTF+K+S+RGVDLDALLDMSTDDLV+LFP+R RRRF RGL RKPMALIKKLRK
Sbjct: 91 AAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRK 270
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK +APAGEKP V+THLRNMIIVPEMIGS++GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 271 AKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 450
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GAT+SSRFIPLK*
Sbjct: 451 YKPVKHGRPGVGATNSSRFIPLK* 522
Score = 194 bits (418), Expect = 3e-048
Identities = 92/138 (66%), Positives = 97/138 (70%)
Frame = -2 / -2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RGIN EE VAP PGLPCLTGL E+ENSA+* PIISGLISTWLKV PL*TP LPIISG
Sbjct: 521 HLRGINLEELVAPTPGLPCLTGLYEIENSAK*CPIISGLISTWLKVFPL*TPMTLPIISG 342
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM R VLT +GFSPAGAS FA RSFL+ A+GFL PL NLL R GKS T
Sbjct: 341 TMIMFLRWVLTAAGFSPAGASIFAFRSFLIKAIGFLVNPLENLLRIREGKSLTRSSVDMS 162
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 161 RRASRSTPLKENFLNVLF 108
Score = 84.0 bits (177), Expect(2) = 2e-028
Identities = 33/65 (50%), Positives = 52/65 (80%)
Frame = -1 / -1
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S +R+K G+G T+T P +L+RL+ D +LS+V+++HL DL+LV+ L++V+T++ASNH R
Sbjct: 522 SLERDKSGGIGSTNTRPTMLNRLI*D*KLSQVMSNHLWFDLDLVKSLSIVNTDDASNHFR 343
Query: 371 DNDHV 357
NDHV
Sbjct: 342 HNDHV 328
Score = 64.8 bits (135), Expect(2) = 2e-028
Identities = 31/68 (45%), Positives = 41/68 (60%)
Frame = -1 / -1
Query: 329 LLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHVEKRI*VDAAVAVLA 150
LL+S FR QFLD+ H LP Q+ EPS E+LD+++S HVEK I +D++ L
Sbjct: 300 LLSSWCFNFRFPQFLDQSHRLPRQSSREPSTDTGREKLDKIISRHVEKSIKIDSSEGKLF 121
Query: 149 ERPLLGSS 126
ER L S
Sbjct: 120 ERSLFYDS 97
>gb|BT010135.1| Arabidopsis thaliana At5g09500 gene, complete cds
Length = 453
Score = 301 bits (651), Expect = 2e-080
Identities = 125/144 (86%), Positives = 136/144 (94%)
Frame = +3 / +1
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG KKRTF+K+S+RGVDLDALLDMSTDDLV+LFP+R RRRF RGL RKPMALIKKLRK
Sbjct: 22 AAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRK 201
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK +APAGEKP V+THLRNMIIVPEMIGS++GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 202 AKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 381
Query: 480 YKPVKHGRPGIGATHSSRFIPLK* 551
YKPVKHGRPG+GAT+SSRFIPLK*
Sbjct: 382 YKPVKHGRPGVGATNSSRFIPLK* 453
Score = 194 bits (418), Expect = 3e-048
Identities = 92/138 (66%), Positives = 97/138 (70%)
Frame = -2 / -2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RGIN EE VAP PGLPCLTGL E+ENSA+* PIISGLISTWLKV PL*TP LPIISG
Sbjct: 452 HLRGINLEELVAPTPGLPCLTGLYEIENSAK*CPIISGLISTWLKVFPL*TPMTLPIISG 273
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM R VLT +GFSPAGAS FA RSFL+ A+GFL PL NLL R GKS T
Sbjct: 272 TMIMFLRWVLTAAGFSPAGASIFAFRSFLIKAIGFLVNPLENLLRIREGKSLTRSSVDMS 93
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 92 RRASRSTPLKENFLNVLF 39
Score = 84.0 bits (177), Expect(2) = 2e-028
Identities = 33/65 (50%), Positives = 52/65 (80%)
Frame = -1 / -1
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S +R+K G+G T+T P +L+RL+ D +LS+V+++HL DL+LV+ L++V+T++ASNH R
Sbjct: 453 SLERDKSGGIGSTNTRPTMLNRLI*D*KLSQVMSNHLWFDLDLVKSLSIVNTDDASNHFR 274
Query: 371 DNDHV 357
NDHV
Sbjct: 273 HNDHV 259
Score = 64.8 bits (135), Expect(2) = 2e-028
Identities = 31/68 (45%), Positives = 41/68 (60%)
Frame = -1 / -1
Query: 329 LLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHVEKRI*VDAAVAVLA 150
LL+S FR QFLD+ H LP Q+ EPS E+LD+++S HVEK I +D++ L
Sbjct: 231 LLSSWCFNFRFPQFLDQSHRLPRQSSREPSTDTGREKLDKIISRHVEKSIKIDSSEGKLF 52
Query: 149 ERPLLGSS 126
ER L S
Sbjct: 51 ERSLFYDS 28
>gb|AV538711.1|AV538711 AV538711 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ120a09F 3', mRNA sequence
Length = 597
Score = 299 bits (648), Expect = 6e-080
Identities = 122/139 (87%), Positives = 134/139 (96%)
Frame = +3 / -1
Query: 135 KKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDA 314
KKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRKAK++A
Sbjct: 597 KKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREA 418
Query: 315 PAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVK 494
P GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVK
Sbjct: 417 PQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVK 238
Query: 495 HGRPGIGATHSSRFIPLK* 551
HGRPG+GATHSSRFIPLK*
Sbjct: 237 HGRPGVGATHSSRFIPLK* 181
Score = 195 bits (420), Expect = 2e-048
Identities = 91/138 (65%), Positives = 97/138 (70%)
Frame = -2 / +2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 182 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 361
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 362 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 541
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 542 RRASRSTPLKANFLNVLF 595
Score = 161 bits (347), Expect = 2e-038
Identities = 73/139 (52%), Positives = 95/139 (68%)
Frame = -1 / +1
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 181 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 360
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 361 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 540
Query: 191 EKRI*VDAAVAVLAERPLL 135
EK I +++ L +RPLL
Sbjct: 541 EKSIEINSFEGKLLKRPLL 597
Score = 111 bits (238), Expect(2) = 3e-024
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 472 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 293
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 292 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 191
Score = 22.6 bits (43), Expect(2) = 3e-024
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2 / -3
Query: 137 EEDVPQVQLXXXXXXCASRHVH 202
EEDV +V L C+SR+V+
Sbjct: 595 EEDV*EVCLQRS*SRCSSRYVY 530
>gb|AV538084.1|AV538084 AV538084 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ11b11F 3', mRNA sequence
Length = 620
Score = 295 bits (638), Expect = 2e-078
Identities = 119/138 (86%), Positives = 132/138 (95%)
Frame = +3 / -2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 613 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 434
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 433 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 254
Query: 480 YKPVKHGRPGIGATHSSR 533
YKPVKHGRPG+GATHSS+
Sbjct: 253 YKPVKHGRPGVGATHSSQ 200
Score = 186 bits (400), Expect = 1e-045
Identities = 88/132 (66%), Positives = 93/132 (70%)
Frame = -2 / +3
Query: 529 EEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISGTMIMLRR 350
EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISGTMIM +
Sbjct: 204 EEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISGTMIMFLK 383
Query: 349 CVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXXXXXXXST 170
VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T ST
Sbjct: 384 WVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDISRRASRST 563
Query: 169 PR*LYLRNVLFL 134
P NVLFL
Sbjct: 564 PLKANFLNVLFL 599
Score = 167 bits (360), Expect = 3e-040
Identities = 75/142 (52%), Positives = 98/142 (69%)
Frame = -1 / +2
Query: 542 RNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLRDND 363
R+ R VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH RD+D
Sbjct: 191 RSSLRRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDD 370
Query: 362 HVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHVEKR 183
HV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+EK
Sbjct: 371 HVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKS 550
Query: 182 I*VDAAVAVLAERPLLGSSGGN 117
I +++ L +RPLLG+S +
Sbjct: 551 IEINSFEGKLLKRPLLGNSSSS 616
Score = 108 bits (231), Expect(2) = 4e-025
Identities = 50/91 (54%), Positives = 65/91 (71%)
Frame = +2 / -1
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 473 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 294
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLA 532
*DD LP *VL+L+QAGQAR A C+PL +
Sbjct: 293 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFS 201
Score = 104 bits (221), Expect = 5e-021
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +3 / -3
Query: 420 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 551
N VEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 189 NLVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 58
Score = 28.6 bits (56), Expect(2) = 4e-025
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / -1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 605 SSQEEDV*EVCLQRS*SRCSSRYVY 531
>ref|NM_123730.1| Arabidopsis thaliana structural constituent of ribosome AT5G43640
mRNA, complete cds
Length = 450
Score = 292 bits (633), Expect = 7e-078
Identities = 123/145 (84%), Positives = 134/145 (92%)
Frame = +3 / +1
Query: 117 VAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLR 296
VAAG KKRTF+K+S+RGVDLDALLDMS +DLV+ F +R RRRF RGL RKPMALIKKLR
Sbjct: 16 VAAGIVKKRTFKKFSFRGVDLDALLDMSIEDLVKHFSSRIRRRFSRGLTRKPMALIKKLR 195
Query: 297 KAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSI 476
KAK +APAGEKP V+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSI
Sbjct: 196 KAKMEAPAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSI 375
Query: 477 SYKPVKHGRPGIGATHSSRFIPLK* 551
SYKPVKHGRPG+GAT+SSRFIPLK*
Sbjct: 376 SYKPVKHGRPGVGATNSSRFIPLK* 450
Score = 187 bits (403), Expect = 4e-046
Identities = 88/138 (63%), Positives = 95/138 (68%)
Frame = -2 / -2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RGIN EE VAP PGLPC TGL E+ENSA+* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 449 HLRGINLEELVAPTPGLPCFTGLYEIENSAK*CPIISGLISTWLKVFPLYTPMMLPIISG 270
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
TMIM +CVLT +GFSPAGAS FALR+FL+ A+GFL PL NLL R K T
Sbjct: 269 TMIMFLKCVLTDAGFSPAGASIFALRNFLIKAIGFLVNPLENLLRIRELKCLTRSSMDMS 90
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP VLF
Sbjct: 89 RSASRSTPLKENFLKVLF 36
Score = 150 bits (322), Expect = 6e-035
Identities = 70/145 (48%), Positives = 95/145 (65%)
Frame = -1 / -1
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S +R+KP G+G T+T P VL R V D ELS+V+++HLRLDL+LV+ L+VV TN+ASNH R
Sbjct: 450 SLERDKPGGIGSTNTRPTVLYRFV*D*ELSQVMSNHLRLDLDLVKSLSVVHTNDASNHFR 271
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
NDHV ++C LLTS + FR AQFL++ H Q+ +PS E D++ GHV
Sbjct: 270 HNDHVPQVCSH*CWLLTSWCLHFRFAQFLNQSHRFSGQSSRKPSANTGTEMFDKIFDGHV 91
Query: 191 EKRI*VDAAVAVLAERPLLGSSGGN 117
EKRI +D++ L E L +S N
Sbjct: 90 EKRIEIDSSERKLFEGSLFHNSSRN 16
Score = 120 bits (257), Expect = 5e-026
Identities = 58/139 (41%), Positives = 80/139 (57%)
Frame = +2 / +3
Query: 134 QEEDVPQVQLXXXXXXCASRHVHXXXXXXXXXXXQEKVPEGSEEEAHGAHQETAQGEKGC 313
++E++ +V CASRHVH +KV +++ +G E AQ E G
Sbjct: 33 EKENLQKVFFQRSRSRCASRHVHRRSCQTFQFPYSQKVF*RIDQKTYGFD*EIAQSENGG 212
Query: 314 SCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLLQAGQ 493
+ W*EA S++T HDHC *+DWKH WC+QR+D P DQA DD L *VL+L+Q G+
Sbjct: 213 TSW*EASISENTLEEHDHCA*NDWKHHWCVQRKDF*PSRDQAGDDWTLLG*VLNLIQTGK 392
Query: 494 ARQARYRCHPLLAVYSSEM 550
AR A C+ L VY S++
Sbjct: 393 AR*AWCWCYQFLQVYPSQV 449
>gb|AY086958.1| Arabidopsis thaliana clone 29963 mRNA, complete sequence
Length = 682
Score = 292 bits (632), Expect = 1e-077
Identities = 119/145 (82%), Positives = 134/145 (92%)
Frame = +3 / +3
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AA KKRTF+K+S++GVDLDALLDM TDDLV+LFP+R RRR RGL RKPMALIKKLRK
Sbjct: 90 AAALAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRMSRGLTRKPMALIKKLRK 269
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK DAPAGEKPE V+THLRNM+I+PEMIGSI+GVYNGKTFNQ+EIKPEMIGHYLAEFSI+
Sbjct: 270 AKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIGHYLAEFSIT 449
Query: 480 YKPVKHGRPGIGATHSSRFIPLK*A 554
YKPV+HG+PG GATHSSRFIPLK*+
Sbjct: 450 YKPVRHGKPGHGATHSSRFIPLK*S 524
Score = 184 bits (396), Expect = 4e-045
Identities = 91/138 (65%), Positives = 95/138 (68%)
Frame = -2 / -1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RGIN EE VAP PGLPCLTGL* +ENSAR* PIISGLIS WLKV PL TP MLPIISG
Sbjct: 520 HLRGINLEECVAP*PGLPCLTGL*VIENSAR*CPIISGLISIWLKVFPLYTPIMLPIISG 341
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
+ M R VLT SGFSPAGAS FALR+FLM A+GFL PL LLL R GKS T
Sbjct: 340 IITMFLRWVLTTSGFSPAGASSFALRNFLMRAIGFLVNPLLILLLIREGKSSTRSSVGMS 161
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 160 RRASRSTPLKENFLNVLF 107
Score = 149 bits (320), Expect = 1e-034
Identities = 73/143 (51%), Positives = 92/143 (64%)
Frame = -1 / -3
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
+S +R+KPRGV T TG AV + V D E KV+++HLR DL+LV+ L++V TNNASNH
Sbjct: 524 ASLERDKPRGVCSTMTGLAVPNGFVSD*EFRKVMSNHLRFDLDLVKSLSIVHTNNASNHF 345
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGH 195
R N HV M + LLTS I FR AQFLDE H LP + PS EELD+++SGH
Sbjct: 344 RHNHHVP*MGSHYFGLLTSWCI*FRFAQFLDESHRLPR*SSTHPSSYTGREELDKIISGH 165
Query: 194 VEKRI*VDAAVAVLAERPLLGSS 126
V+K I +D+ L ER LL S
Sbjct: 164 VKKSIEIDSFEGKLFERSLLRKS 96
Score = 109 bits (233), Expect(2) = 4e-024
Identities = 49/96 (51%), Positives = 63/96 (65%)
Frame = +2 / +2
Query: 263 EEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA* 442
EEA+G+HQE AQ E C+ W*EA +S++ S H *+DWKH WC+Q +D P DQ
Sbjct: 233 EEAYGSHQEIAQSETRCTSW*EARSSENPSKEHGDYA*NDWKHYWCVQWKDF*PNRDQTG 412
Query: 443 DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYSSEM 550
DD LPC +L+ LQ ARQAR C+ LL VY S++
Sbjct: 413 DDWTLPCGILNHLQTR*ARQARSWCYTLL*VYPSQV 520
Score = 24.4 bits (47), Expect(2) = 4e-024
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2 / +2
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
S +EE+V +V L C+S H H
Sbjct: 98 SCEEENVQKVFLQRSRSRCSS*HAH 172
>ref|NM_120986.2| Arabidopsis thaliana structural constituent of ribosome AT5G09490
mRNA, complete cds
Length = 681
Score = 292 bits (632), Expect = 1e-077
Identities = 119/145 (82%), Positives = 134/145 (92%)
Frame = +3 / +3
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AA KKRTF+K+S++GVDLDALLDM TDDLV+LFP+R RRR RGL RKPMALIKKLRK
Sbjct: 90 AAALAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRMSRGLTRKPMALIKKLRK 269
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK DAPAGEKPE V+THLRNM+I+PEMIGSI+GVYNGKTFNQ+EIKPEMIGHYLAEFSI+
Sbjct: 270 AKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIGHYLAEFSIT 449
Query: 480 YKPVKHGRPGIGATHSSRFIPLK*A 554
YKPV+HG+PG GATHSSRFIPLK*+
Sbjct: 450 YKPVRHGKPGHGATHSSRFIPLK*S 524
Score = 184 bits (396), Expect = 4e-045
Identities = 91/138 (65%), Positives = 95/138 (68%)
Frame = -2 / -3
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RGIN EE VAP PGLPCLTGL* +ENSAR* PIISGLIS WLKV PL TP MLPIISG
Sbjct: 520 HLRGINLEECVAP*PGLPCLTGL*VIENSAR*CPIISGLISIWLKVFPLYTPMMLPIISG 341
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 191
+ M R VLT SGFSPAGAS FALR+FLM A+GFL PL LLL R GKS T
Sbjct: 340 IITMFLRWVLTTSGFSPAGASSFALRNFLMRAIGFLVNPLLILLLIREGKSSTRSSVGMS 161
Query: 190 XXXXXSTPR*LYLRNVLF 137
STP NVLF
Sbjct: 160 RRASRSTPLKENFLNVLF 107
Score = 147 bits (315), Expect = 5e-034
Identities = 72/143 (50%), Positives = 92/143 (64%)
Frame = -1 / -2
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
+S +R+KPRGV T TG AV + V D E KV+++HLR DL+LV+ L++V TN+ASNH
Sbjct: 524 ASLERDKPRGVCSTMTGLAVPNGFVSD*EFRKVMSNHLRFDLDLVKSLSIVHTNDASNHF 345
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGH 195
R N HV M + LLTS I FR AQFLDE H LP + PS EELD+++SGH
Sbjct: 344 RHNHHVP*MGSHYFGLLTSWCI*FRFAQFLDESHRLPR*SSTHPSSYTGREELDKIISGH 165
Query: 194 VEKRI*VDAAVAVLAERPLLGSS 126
V+K I +D+ L ER LL S
Sbjct: 164 VKKSIEIDSFEGKLFERSLLRKS 96
Score = 109 bits (232), Expect(2) = 5e-024
Identities = 49/96 (51%), Positives = 63/96 (65%)
Frame = +2 / +2
Query: 263 EEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA* 442
EEA+G+HQE AQ E C+ W*EA +S++ S H *+DWKH WC+Q +D P DQ
Sbjct: 233 EEAYGSHQEIAQSETRCTSW*EARSSENPSKEHGDYA*NDWKHHWCVQWKDF*PNRDQTG 412
Query: 443 DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYSSEM 550
DD LPC +L+ LQ ARQAR C+ LL VY S++
Sbjct: 413 DDWTLPCGILNHLQTR*ARQARSWCYTLL*VYPSQV 520
Score = 24.4 bits (47), Expect(2) = 5e-024
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2 / +2
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
S +EE+V +V L C+S H H
Sbjct: 98 SCEEENVQKVFLQRSRSRCSS*HAH 172
>ref|NM_001035879.1| Arabidopsis thaliana RPS15 (RIBOSOMAL PROTEIN S15); structural
constituent of ribosome AT1G04270 (RPS15) transcript
variant AT1G04270.2 mRNA, complete cds
Length = 795
Score = 194 bits (418), Expect(2) = 2e-077
Identities = 78/88 (88%), Positives = 84/88 (95%)
Frame = +3 / +2
Query: 288 KLRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAE 467
K + K++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAE
Sbjct: 284 KKLRKKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAE 463
Query: 468 FSISYKPVKHGRPGIGATHSSRFIPLK* 551
FSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 464 FSISYKPVKHGRPGVGATHSSRFIPLK* 547
Score = 157 bits (337), Expect(2) = 2e-050
Identities = 68/85 (80%), Positives = 71/85 (83%)
Frame = -2 / -1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 546 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 367
Query: 370 TMIMLRRCVLTGSGFSPAGASFFAL 296
TMIM + VLTGSGFSP GAS F L
Sbjct: 366 TMIMFLKWVLTGSGFSPCGASLFFL 292
Score = 117 bits (251), Expect(2) = 2e-077
Identities = 48/63 (76%), Positives = 57/63 (90%)
Frame = +3 / +2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 119 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 298
Query: 300 AKK 308
++
Sbjct: 299 KRE 307
Score = 103 bits (220), Expect(2) = 8e-028
Identities = 46/77 (59%), Positives = 57/77 (74%)
Frame = -1 / -3
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 547 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 368
Query: 371 DNDHVTEMCLDWLRLLT 321
D+DHV ++ W LLT
Sbjct: 367 DDDHVPQVGSHWFWLLT 317
Score = 102 bits (217), Expect(3) = 1e-024
Identities = 47/83 (56%), Positives = 60/83 (72%)
Frame = +2 / +1
Query: 293 AQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VL 472
A+ +KG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA*DD LP *VL
Sbjct: 289 AEEKKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VL 468
Query: 473 HLLQAGQARQARYRCHPLLAVYS 541
+L+QAGQAR A C+PL ++S
Sbjct: 469 YLIQAGQAR*AWCWCYPLFQIHS 537
Score = 65.2 bits (136), Expect(2) = 2e-050
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = -1 / -3
Query: 293 QFLDERHGLPLQTPLEPSPGARGEELDEVVSGHVEKRI*VDAAVAVLAERPLLGSSGGN 117
Q L++ H LP QT EPS R EELD+++S H+EK I +++ L +RPLLG+S +
Sbjct: 292 QLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNSSSS 116
Score = 42.8 bits (87), Expect(2) = 8e-028
Identities = 24/53 (45%), Positives = 27/53 (50%)
Frame = -2 / -1
Query: 292 SFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXXXXXXXSTPR*LYLRNVLFL 134
SFL+ A+GFL +PL NLL R KS T STP NVLFL
Sbjct: 291 SFLIRAIGFLVKPLENLLRIREEKSLTRSSVDISRRASRSTPLKANFLNVLFL 133
Score = 28.6 bits (56), Expect(3) = 1e-024
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 127 SSQEEDV*EVCLQRS*SRCSSRYVY 201
Score = 22.6 bits (43), Expect(3) = 1e-024
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 98 DVEPEVAAAGVPKK 139
>gb|BE038827.1|BE038827 AB04G03 AB Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 729
Score = 273 bits (590), Expect(2) = 1e-076
Identities = 113/125 (90%), Positives = 120/125 (96%)
Frame = +3 / -1
Query: 177 LDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLR 356
LDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLR
Sbjct: 624 LDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLR 445
Query: 357 NMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRF 536
NMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRF
Sbjct: 444 NMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRF 265
Query: 537 IPLK* 551
IPLK*
Sbjct: 264 IPLK* 250
Score = 188 bits (406), Expect = 2e-046
Identities = 84/113 (74%), Positives = 90/113 (79%)
Frame = -2 / +2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 251 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 430
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWT 212
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 431 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLT 589
Score = 153 bits (328), Expect = 9e-036
Identities = 68/124 (54%), Positives = 86/124 (69%)
Frame = -1 / +1
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 250 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 429
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHV 192
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++S H+
Sbjct: 430 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 609
Query: 191 EKRI 180
EK I
Sbjct: 610 EKSI 621
Score = 111 bits (238), Expect(2) = 3e-024
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 541 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 362
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 361 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 260
Score = 36.3 bits (73), Expect(2) = 1e-076
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +3 / -2
Query: 120 AAGAPKKRTFRKYSYRGV 173
AAG PKKRTF+K++++GV
Sbjct: 680 AAGVPKKRTFKKFAFKGV 627
Score = 22.6 bits (43), Expect(2) = 3e-024
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / -2
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 701 DVEPEVAAAGVPKK 660
>emb|Z23162.1|ATRBPS15B A.thaliana H1flk-3 gene, 3' end, and ribosomal protein S15 gene,
complete CDS
Length = 2780
Score = 195 bits (421), Expect(3) = 4e-072
Identities = 79/87 (90%), Positives = 84/87 (96%)
Frame = +3 / +3
Query: 291 LRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 470
L K K++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 1968 LIKQKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 2147
Query: 471 SISYKPVKHGRPGIGATHSSRFIPLK* 551
SISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 2148 SISYKPVKHGRPGVGATHSSRFIPLK* 2228
Score = 158 bits (339), Expect(3) = 3e-046
Identities = 68/85 (80%), Positives = 71/85 (83%)
Frame = -2 / -2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 2227 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 2048
Query: 370 TMIMLRRCVLTGSGFSPAGASFFAL 296
TMIM + VLTGSGFSP GAS F L
Sbjct: 2047 TMIMFLKWVLTGSGFSPCGASLFCL 1973
Score = 103 bits (220), Expect = 7e-021
Identities = 46/77 (59%), Positives = 57/77 (74%)
Frame = -1 / -1
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 2228 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 2049
Query: 371 DNDHVTEMCLDWLRLLT 321
D+DHV ++ W LLT
Sbjct: 2048 DDDHVPQVGSHWFWLLT 1998
Score = 102 bits (217), Expect(3) = 2e-022
Identities = 47/80 (58%), Positives = 58/80 (72%)
Frame = +2 / +2
Query: 302 EKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLL 481
EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA*DD LP *VL+L+
Sbjct: 1979 EKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLI 2158
Query: 482 QAGQARQARYRCHPLLAVYS 541
QAGQAR A C+PL ++S
Sbjct: 2159 QAGQAR*AWCWCYPLFQIHS 2218
Score = 82.6 bits (174), Expect(3) = 4e-072
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = +3 / +2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRF 248
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRR+
Sbjct: 1235 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRY 1363
Score = 47.3 bits (97), Expect(3) = 3e-046
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = -1 / -2
Query: 245 PSPGARGEELDEVVSGHVEKRI*VDAAVAVLAERPLLGSSGGN 117
PS R EELD+++S H+EK I +++ L +RPLLG+S +
Sbjct: 1360 PSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNSSSS 1232
Score = 42.8 bits (87), Expect(3) = 4e-072
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3 / +2
Query: 243 RFQRGLKRKPMALIKKLRKA 302
RF RGL RKPMALIKKLRKA
Sbjct: 1445 RFSRGLTRKPMALIKKLRKA 1504
Score = 28.6 bits (56), Expect(3) = 3e-046
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2 / -3
Query: 301 ALRSFLMSAMGFLFRPLWNL 242
A SFL+ A+GFL +PL NL
Sbjct: 1503 AFLSFLIRAIGFLVKPLENL 1444
Score = 28.6 bits (56), Expect(3) = 2e-022
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 1243 SSQEEDV*EVCLQRS*SRCSSRYVY 1317
Score = 22.6 bits (43), Expect(3) = 2e-022
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 1214 DVEPEVAAAGVPKK 1255
>gb|AV536604.1|AV536604 AV536604 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0335R 5', mRNA
sequence
Length = 461
Score = 268 bits (579), Expect = 2e-070
Identities = 109/126 (86%), Positives = 120/126 (95%)
Frame = +3 / +2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 83 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 262
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 263 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 442
Query: 480 YKPVKH 497
YKPVKH
Sbjct: 443 YKPVKH 460
Score = 159 bits (341), Expect = 1e-037
Identities = 78/121 (64%), Positives = 83/121 (68%)
Frame = -2 / -3
Query: 496 CLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISGTMIMLRRCVLTGSGFSPA 317
CLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISGTMIM + VLTGSGFSP
Sbjct: 459 CLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISGTMIMFLKWVLTGSGFSPC 280
Query: 316 GASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXXXXXXXSTPR*LYLRNVLF 137
GAS FA SFL+ A+GFL +PL NLL R KS T STP NVLF
Sbjct: 279 GASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDISRRASRSTPLKANFLNVLF 100
Query: 136 L 134
L
Sbjct: 99 L 97
Score = 153 bits (328), Expect = 9e-036
Identities = 68/127 (53%), Positives = 89/127 (70%)
Frame = -1 / -2
Query: 497 VLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLRDNDHVTEMCLDWLRLLTS 318
VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH RD+DHV ++ W LLT
Sbjct: 460 VLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVGSHWFWLLTL 281
Query: 317 RSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHVEKRI*VDAAVAVLAERPL 138
+ FR Q L++ H LP QT EPS R EELD+++S H+EK I +++ L +RPL
Sbjct: 280 WCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPL 101
Query: 137 LGSSGGN 117
LG+S +
Sbjct: 100 LGNSSSS 80
Score = 99.6 bits (211), Expect(3) = 7e-024
Identities = 45/79 (56%), Positives = 58/79 (73%)
Frame = +2 / +1
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 223 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 402
Query: 440 *DDRPLPC*VLHLLQAGQA 496
*DD LP *VL+L+QAGQA
Sbjct: 403 *DDWSLPG*VLYLIQAGQA 459
Score = 28.6 bits (56), Expect(3) = 7e-024
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SSQEEDV +V L C+SR+V+
Sbjct: 91 SSQEEDV*EVCLQRS*SRCSSRYVY 165
Score = 22.6 bits (43), Expect(3) = 7e-024
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 102 DVEPEVAAGAPKKR 143
DVEPEVAA K+
Sbjct: 62 DVEPEVAAAGVPKK 103
>gb|AV545466.1|AV545466 AV545466 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ84a04F 3', mRNA sequence
Length = 561
Score = 265 bits (574), Expect = 1e-069
Identities = 111/129 (86%), Positives = 120/129 (93%)
Frame = +3 / -1
Query: 180 DALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLRN 359
DALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRKAK++APAGEKPE V++HLRN
Sbjct: 561 DALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPAGEKPEAVRSHLRN 382
Query: 360 MIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFI 539
MIIVPEMIGSI+GVYNGKTF QVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFI
Sbjct: 381 MIIVPEMIGSIIGVYNGKTFKQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFI 202
Query: 540 PLK*AGTRL 566
PLK* R+
Sbjct: 201 PLK*RPYRV 175
Score = 188 bits (404), Expect = 3e-046
Identities = 85/113 (75%), Positives = 90/113 (79%)
Frame = -2 / +2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLIST LKV PL TP MLPIISG
Sbjct: 191 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTCLKVFPLYTPMMLPIISG 370
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWT 212
TMIM + +LT SGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 371 TMIMFLKWLLTASGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLT 529
Score = 149 bits (319), Expect = 2e-034
Identities = 65/125 (52%), Positives = 88/125 (70%)
Frame = -1 / +1
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
SS +R++P GVG T+ P VL+ LV DGEL KV+++HLRLDL+L+E L++V TN+ASNH
Sbjct: 187 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLLESLSIVHTNDASNHF 366
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVVSGH 195
R NDHV ++ LLTS + FRLA+FL++ H L Q+ EPS EELD+++ H
Sbjct: 367 RHNDHVPQVASHCFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 546
Query: 194 VEKRI 180
VEK I
Sbjct: 547 VEKSI 561
Score = 125 bits (267), Expect = 2e-027
Identities = 60/129 (46%), Positives = 78/129 (60%)
Frame = +2 / -3
Query: 182 CASRHVHXXXXXXXXXXXQEKVPEGSEEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*H 361
C+SRHV+ +KV +E+A+G ET QGEK + W*EA +S+ H
Sbjct: 559 CSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEKRGTSW*EARSSEKPLEEH 380
Query: 362 DHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
DHC *+DWKH WC+Q +D Q DQA*DD LPC VLHL+QA AR A C+PLL V+
Sbjct: 379 DHCA*NDWKHHWCVQWKDFQASGDQA*DDWTLPCRVLHLVQAS*AR*AWRWCYPLLQVHP 200
Query: 542 SEMSWYSAL 568
S++ +L
Sbjct: 199 SQVKTIQSL 173
>emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5, BAC clone T5E8 (ESSA project)
Length = 103534
Score = 198 bits (427), Expect(3) = 2e-069
Identities = 80/92 (86%), Positives = 87/92 (94%)
Frame = +3 / -3
Query: 291 LRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 470
+R K++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 96743 MRDQKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 96564
Query: 471 SISYKPVKHGRPGIGATHSSRFIPLK*AGTRL 566
SISYKPVKHGRPG+GATHSSRFIPLK* R+
Sbjct: 96563 SISYKPVKHGRPGVGATHSSRFIPLK*RPYRV 96468
Score = 184 bits (397), Expect(2) = 1e-062
Identities = 77/94 (81%), Positives = 85/94 (90%)
Frame = +3 / -1
Query: 291 LRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 470
L + K +APAGEKP V+THLRNMIIVPEMIGS++GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 95089 LYEQKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEF 94910
Query: 471 SISYKPVKHGRPGIGATHSSRFIPLK*AGTRLFS 572
SISYKPVKHGRPG+GAT+SSRFIPLK* L+S
Sbjct: 94909 SISYKPVKHGRPGVGATNSSRFIPLK*IIKLLWS 94808
Score = 182 bits (393), Expect(3) = 4e-064
Identities = 72/84 (85%), Positives = 81/84 (96%)
Frame = +3 / -2
Query: 303 KKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISY 482
K DAPAGEKPE V+THLRNM+I+PEMIGSI+GVYNGKTFNQ+EIKPEMIGHYLAEFSI+Y
Sbjct: 93411 KLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIGHYLAEFSITY 93232
Query: 483 KPVKHGRPGIGATHSSRFIPLK*A 554
KPV+HG+PG GATHSSRFIPLK*+
Sbjct: 93231 KPVRHGKPGHGATHSSRFIPLK*S 93160
Score = 160 bits (345), Expect(3) = 2e-042
Identities = 69/83 (83%), Positives = 71/83 (85%)
Frame = -2 / +1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 96484 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 96663
Query: 370 TMIMLRRCVLTGSGFSPAGASFF 302
TMIM + VLTGSGFSPAGAS F
Sbjct: 96664 TMIMFLKWVLTGSGFSPAGASLF 96732
Score = 149 bits (321), Expect(2) = 2e-035
Identities = 66/83 (79%), Positives = 69/83 (83%)
Frame = -2 / +3
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RGIN EE VAP PGLPCLTGL E+ENSA+* PIISGLISTWLKV PL*TP LPIISG
Sbjct: 94830 HLRGINLEELVAPTPGLPCLTGLYEIENSAK*CPIISGLISTWLKVFPL*TPMTLPIISG 95009
Query: 370 TMIMLRRCVLTGSGFSPAGASFF 302
TMIM R VLT +GFSPAGAS F
Sbjct: 95010 TMIMFLRWVLTAAGFSPAGASIF 95078
Score = 139 bits (298), Expect(3) = 3e-037
Identities = 64/83 (77%), Positives = 66/83 (79%)
Frame = -2 / +2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RGIN EE VAP PGLPCLTGL* +ENSAR* PIISGLIS WLKV PL TP MLPIISG
Sbjct: 93164 HLRGINLEECVAP*PGLPCLTGL*VIENSAR*CPIISGLISIWLKVFPLYTPMMLPIISG 93343
Query: 370 TMIMLRRCVLTGSGFSPAGASFF 302
+ M R VLT SGFSPAGAS F
Sbjct: 93344 IITMFLRWVLTTSGFSPAGASSF 93412
Score = 110 bits (234), Expect = 8e-023
Identities = 47/84 (55%), Positives = 62/84 (73%)
Frame = -1 / +3
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
SS +R++P GVG T+ P VL+ LV DGEL KV+++HLRLDL+LVE L++V TN+ASNH
Sbjct: 96480 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 96659
Query: 374 RDNDHVTEMCLDWLRLLTSRSILF 303
R NDHV ++ W LLTS + F
Sbjct: 96660 RHNDHVPQVGSHWFWLLTSWCLSF 96731
Score = 105 bits (224), Expect(2) = 4e-022
Identities = 47/89 (52%), Positives = 59/89 (66%)
Frame = +2 / -2
Query: 302 EKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLL 481
EK + W*EA S++ HDHC *+DWKH WC+Q +D QP DQA*DD LPC VLHL+
Sbjct: 96732 EKRGTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLV 96553
Query: 482 QAGQARQARYRCHPLLAVYSSEMSWYSAL 568
QA AR A C+PLL V+ S++ +L
Sbjct: 96552 QAS*AR*AWRWCYPLLQVHPSQVKTIQSL 96466
Score = 88.1 bits (186), Expect(2) = 1e-062
Identities = 35/57 (61%), Positives = 47/57 (82%)
Frame = +3 / -3
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKK 290
AAG KKRTF+K+S+RGVDLDALLDMSTDDLV+LFP+R RRR + L ++ ++ ++
Sbjct: 95519 AAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRLEDSLNQRALSQFRR 95349
Score = 81.3 bits (171), Expect(3) = 2e-069
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = +3 / -1
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRR 245
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRR
Sbjct: 97213 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRR 97088
Score = 80.3 bits (169), Expect(3) = 4e-064
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3 / -1
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRF 248
AA KKRTF+K+S++GVDLDALLDM TDDLV+LFP+R RRRF
Sbjct: 93844 AAALAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRF 93716
Score = 42.8 bits (87), Expect(3) = 2e-069
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3 / -2
Query: 243 RFQRGLKRKPMALIKKLRKA 302
RF RGL RKPMALIKKLRKA
Sbjct: 97005 RFSRGLTRKPMALIKKLRKA 96946
Score = 41.4 bits (84), Expect(3) = 4e-064
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3 / -1
Query: 243 RFQRGLKRKPMALIKKLRKAKK 308
R RGL RKPMALIKKLRKA K
Sbjct: 93634 RMSRGLTRKPMALIKKLRKAVK 93569
Score = 40.9 bits (83), Expect(3) = 3e-037
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -1 / +2
Query: 248 EPSPGARGEELDEVVSGHVEKRI*VDAAVAVLAERPLLGSS 126
+PS EELD+++SGHV+K I +D+ L ER LL S
Sbjct: 93716 KPSSYTGREELDKIISGHVKKSIEIDSFEGKLFERSLLRKS 93838
Score = 37.3 bits (75), Expect(3) = 2e-042
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -1 / +2
Query: 245 PSPGARGEELDEVVSGHVEKRI*VDAAVAVLAERPLLGSS 126
PS EELD+++ HVEK I +D+ ER LL +S
Sbjct: 97088 PSANTGREELDKIIGRHVEKSIEIDSFEGEFLERSLLWNS 97207
Score = 33.6 bits (67), Expect(3) = 3e-037
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2 / +3
Query: 310 SFFALRSFLMSAMGFLFRPL 251
SF ALR+FLM A+GFL PL
Sbjct: 93567 SFTALRNFLMRAIGFLVNPL 93626
Score = 33.1 bits (66), Expect(3) = 2e-042
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2 / +2
Query: 301 ALRSFLMSAMGFLFRPLWNL 242
ALRSFL+ A+GFL PL NL
Sbjct: 96947 ALRSFLIKAIGFLVNPLENL 97006
Score = 31.3 bits (62), Expect(2) = 2e-035
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2 / +1
Query: 301 ALRSFLMSAMGFLFRPLWNL 242
A RSFL+ A+GFL PL NL
Sbjct: 95248 AFRSFLIKAIGFLVNPLENL 95307
Score = 31.3 bits (62), Expect(2) = 4e-022
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2 / -3
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVH 202
SS+EE+V +++L C+SRHV+
Sbjct: 97205 SSKEENVQEIRLQRSRSRCSSRHVY 97131
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 107527
Score = 195 bits (421), Expect(3) = 5e-069
Identities = 79/87 (90%), Positives = 84/87 (96%)
Frame = +3 / +3
Query: 291 LRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 470
L K K++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 91092 LIKQKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 91271
Query: 471 SISYKPVKHGRPGIGATHSSRFIPLK* 551
SISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 91272 SISYKPVKHGRPGVGATHSSRFIPLK* 91352
Score = 158 bits (339), Expect(3) = 4e-043
Identities = 68/85 (80%), Positives = 71/85 (83%)
Frame = -2 / -1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 91351 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 91172
Query: 370 TMIMLRRCVLTGSGFSPAGASFFAL 296
TMIM + VLTGSGFSP GAS F L
Sbjct: 91171 TMIMFLKWVLTGSGFSPCGASLFCL 91097
Score = 103 bits (220), Expect = 7e-021
Identities = 46/77 (59%), Positives = 57/77 (74%)
Frame = -1 / -3
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 91352 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 91173
Query: 371 DNDHVTEMCLDWLRLLT 321
D+DHV ++ W LLT
Sbjct: 91172 DDDHVPQVGSHWFWLLT 91122
Score = 82.6 bits (174), Expect(3) = 5e-069
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = +3 / +2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRF 248
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRR+
Sbjct: 90359 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRY 90487
Score = 47.3 bits (97), Expect(3) = 4e-043
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = -1 / -1
Query: 245 PSPGARGEELDEVVSGHVEKRI*VDAAVAVLAERPLLGSSGGN 117
PS R EELD+++S H+EK I +++ L +RPLLG+S +
Sbjct: 90484 PSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNSSSS 90356
Score = 42.8 bits (87), Expect(3) = 5e-069
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3 / +2
Query: 243 RFQRGLKRKPMALIKKLRKA 302
RF RGL RKPMALIKKLRKA
Sbjct: 90569 RFSRGLTRKPMALIKKLRKA 90628
Score = 28.6 bits (56), Expect(3) = 4e-043
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2 / -2
Query: 301 ALRSFLMSAMGFLFRPLWNL 242
A SFL+ A+GFL +PL NL
Sbjct: 90627 AFLSFLIRAIGFLVKPLENL 90568
>gb|AV553829.1|AV553829 AV553829 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ73e06R 5', mRNA sequence
Length = 477
Score = 218 bits (470), Expect(2) = 8e-068
Identities = 89/106 (83%), Positives = 100/106 (94%)
Frame = +3 / +1
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 85 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 264
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIK 437
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIK
Sbjct: 265 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIK 402
Score = 124 bits (265), Expect(2) = 6e-035
Identities = 61/101 (60%), Positives = 65/101 (64%)
Frame = -2 / -2
Query: 436 LISTWLKVLPL*TPTMLPIISGTMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFR 257
LISTWLKV PL TP MLPIISGTMIM + VLTGSGFSP GAS FA SFL+ A+GFL +
Sbjct: 401 LISTWLKVFPLYTPMMLPIISGTMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVK 222
Query: 256 PLWNLLLARAGKSWTXXXXXXXXXXXXSTPR*LYLRNVLFL 134
PL NLL R KS T STP NVLFL
Sbjct: 221 PLENLLRIREEKSLTRSSVDISRRASRSTPLKANFLNVLFL 99
Score = 122 bits (262), Expect(2) = 4e-032
Identities = 53/108 (49%), Positives = 73/108 (67%)
Frame = -1 / -1
Query: 440 RLDLNLVEGLAVVDTNNASNHLRDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPL 261
+LDLNLVE L+VV +N+ASNH RD+DHV ++ W LLT + FR Q L++ H LP
Sbjct: 405 QLDLNLVESLSVVHSNDASNHFRDDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPC 226
Query: 260 QTPLEPSPGARGEELDEVVSGHVEKRI*VDAAVAVLAERPLLGSSGGN 117
QT EPS R EELD+++S H+EK I +++ L +RPLLG+S +
Sbjct: 225 QTSREPSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNSSSS 82
Score = 62.0 bits (129), Expect(2) = 8e-068
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3 / +3
Query: 441 EMIGHYLAEFSISYKPVKHGRPGI 512
EMIGHYLAEFSISYKPVKHGRPG+
Sbjct: 405 EMIGHYLAEFSISYKPVKHGRPGV 476
Score = 46.0 bits (94), Expect(2) = 6e-035
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -2 / -3
Query: 508 PGLPCLTGL*EMENSAR*WPIIS 440
PGLPCLTGL E+ENSAR* PIIS
Sbjct: 472 PGLPCLTGLYEIENSAR**PIIS 404
Score = 37.7 bits (76), Expect(2) = 4e-032
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -1 / -2
Query: 512 DTGPAVLDRLVGDGELSKVVADHLRL 435
+T P VLDRLV D ELS+VV +HL L
Sbjct: 476 NTRPTVLDRLV*DRELSQVVTNHLSL 399
>gb|AV565619.1|AV565619 AV565619 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ227f09F 3', mRNA sequence
Length = 596
Score = 253 bits (548), Expect = 4e-066
Identities = 104/116 (89%), Positives = 111/116 (95%)
Frame = +3 / -1
Query: 204 DDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLRNMIIVPEMI 383
DDLV+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMI
Sbjct: 596 DDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMI 417
Query: 384 GSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 551
GSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 416 GSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 249
Score = 188 bits (406), Expect = 2e-046
Identities = 84/113 (74%), Positives = 90/113 (79%)
Frame = -2 / +1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 250 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 429
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWT 212
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 430 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLT 588
Score = 141 bits (302), Expect = 3e-032
Identities = 63/116 (54%), Positives = 80/116 (68%)
Frame = -1 / +3
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 249 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 428
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELDEVV 204
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD+++
Sbjct: 429 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKII 596
Score = 111 bits (238), Expect = 2e-023
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 540 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 361
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 360 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 259
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 195 bits (421), Expect(3) = 8e-065
Identities = 79/87 (90%), Positives = 84/87 (96%)
Frame = +3 / -1
Query: 291 LRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 470
L K K++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 1142187 LIKQKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 1142008
Query: 471 SISYKPVKHGRPGIGATHSSRFIPLK* 551
SISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 1142007 SISYKPVKHGRPGVGATHSSRFIPLK* 1141927
Score = 158 bits (339), Expect(2) = 2e-040
Identities = 68/85 (80%), Positives = 71/85 (83%)
Frame = -2 / +2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 1141928 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 1142107
Query: 370 TMIMLRRCVLTGSGFSPAGASFFAL 296
TMIM + VLTGSGFSP GAS F L
Sbjct: 1142108 TMIMFLKWVLTGSGFSPCGASLFCL 1142182
Score = 103 bits (220), Expect(3) = 8e-022
Identities = 46/77 (59%), Positives = 57/77 (74%)
Frame = -1 / +1
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 1141927 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 1142106
Query: 371 DNDHVTEMCLDWLRLLT 321
D+DHV ++ W LLT
Sbjct: 1142107 DDDHVPQVGSHWFWLLT 1142157
Score = 102 bits (217), Expect(3) = 1e-034
Identities = 47/80 (58%), Positives = 58/80 (72%)
Frame = +2 / -3
Query: 302 EKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHLL 481
EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA*DD LP *VL+L+
Sbjct: 1142176 EKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLI 1141997
Query: 482 QAGQARQARYRCHPLLAVYS 541
QAGQAR A C+PL ++S
Sbjct: 1141996 QAGQAR*AWCWCYPLFQIHS 1141937
Score = 82.6 bits (174), Expect(3) = 8e-065
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = +3 / -3
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRF 248
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRR+
Sbjct: 1142920 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRY 1142792
Score = 73.5 bits (154), Expect(3) = 1e-034
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +3 / -3
Query: 117 VAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRR 245
VAAG KKR F+K+S+RGVDLDALLDMST+DLV+ F +R RRR
Sbjct: 12296971 VAAGIVKKRIFKKFSFRGVDLDALLDMSTEDLVKHFSSRIRRR 12296843
Score = 47.3 bits (97), Expect(2) = 2e-040
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = -1 / +2
Query: 245 PSPGARGEELDEVVSGHVEKRI*VDAAVAVLAERPLLGSSGGN 117
PS R EELD+++S H+EK I +++ L +RPLLG+S +
Sbjct: 1142795 PSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNSSSS 1142923
Score = 43.2 bits (88), Expect(3) = 1e-034
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3 / -1
Query: 240 RRFQRGLKRKPMALIKKLRKAKK 308
+RF RG RKPMALIKKLRKA K
Sbjct: 12296763 KRFSRGFTRKPMALIKKLRKAVK 12296695
Score = 42.8 bits (87), Expect(3) = 8e-065
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3 / -3
Query: 243 RFQRGLKRKPMALIKKLRKA 302
RF RGL RKPMALIKKLRKA
Sbjct: 1142710 RFSRGLTRKPMALIKKLRKA 1142651
Score = 36.3 bits (73), Expect(3) = 8e-022
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -1 / +2
Query: 245 PSPGARGEELDEVVSGHVEKRI*VDAAVAVLAERPLLGSSGGN 117
PS E D++ GHVEKRI +D++ L E L +S N
Sbjct: 12296843 PSANTGTEMFDKIFGGHVEKRIEIDSSERKLLEDSLFHNSSRN 12296971
Score = 35.4 bits (71), Expect(3) = 8e-022
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / +2
Query: 307 FFALRSFLMSAMGFLFRPLWNLL 239
F ALR+FL+ A+GFL PL NLL
Sbjct: 12296696 FTALRNFLIKAIGFLVNPLENLL 12296764
>gb|N37540.1|N37540 18767 Lambda-PRL2 Arabidopsis thaliana cDNA clone 205M16T7, mRNA
sequence
Length = 528
Score = 249 bits (538), Expect = 9e-065
Identities = 101/119 (84%), Positives = 113/119 (94%)
Frame = +3 / +2
Query: 120 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 299
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 20 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 199
Query: 300 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSI 476
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGK FNQVE+KPEMIGHYLAEFSI
Sbjct: 200 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKAFNQVEVKPEMIGHYLAEFSI 376
Score = 149 bits (320), Expect = 1e-034
Identities = 73/114 (64%), Positives = 77/114 (67%)
Frame = -2 / -1
Query: 478 EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISGTMIMLRRCVLTGSGFSPAGASFFA 299
+MENSAR* PIISGL STWLK PL TP MLPIISGTMIM + VLTGSGFSPAGAS FA
Sbjct: 378 KMENSAR*CPIISGLTSTWLKAFPLYTPMMLPIISGTMIMFLKWVLTGSGFSPAGASLFA 199
Query: 298 LRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXXXXXXXSTPR*LYLRNVLF 137
LRSFL+ A+GFL PL NLL R KS T STP NVLF
Sbjct: 198 LRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMSRRASRSTPLKANFLNVLF 37
Score = 133 bits (286), Expect = 5e-030
Identities = 59/117 (50%), Positives = 80/117 (68%)
Frame = -1 / -3
Query: 476 DGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLRDNDHVTEMCLDWLRLLTSRSILFRL 297
DG+L KV+++HLRLDL+LVE L++V TN+ASNH R NDHV ++ W LLTS + FRL
Sbjct: 376 DGKLCKVMSNHLRLDLHLVESLSIVHTNDASNHFRHNDHVPQVGSHWFWLLTSWCLSFRL 197
Query: 296 AQFLDERHGLPLQTPLEPSPGARGEELDEVVSGHVEKRI*VDAAVAVLAERPLLGSS 126
A+FL++ H L Q+ EPS EELD+++ HVEK I +D+ ER LL +S
Sbjct: 196 AEFLNQSHRLSRQSSREPSANTGREELDKIIGRHVEKSIEIDSFEGEFLERSLLWNS 26
Score = 113 bits (241), Expect = 9e-024
Identities = 52/117 (44%), Positives = 69/117 (58%)
Frame = +2 / +1
Query: 128 SSQEEDVPQVQLXXXXXXCASRHVHXXXXXXXXXXXQEKVPEGSEEEAHGAHQETAQGEK 307
SS+EE+V +++L C+SRHV+ +KV +E+A+G ET QGEK
Sbjct: 28 SSKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEK 207
Query: 308 GCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA*DDRPLPC*VLHL 478
+ W*EA S++ HDHC *+DWKH WC+Q + QP QA*DD LPC V HL
Sbjct: 208 RGTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKGFQPSGGQA*DDWTLPCRVFHL 378
>gb|BP582590.1|BP582590 BP582590 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-36-N16 3',
mRNA sequence
Length = 455
Score = 246 bits (532), Expect = 6e-064
Identities = 101/113 (89%), Positives = 108/113 (95%)
Frame = +3 / -2
Query: 213 VQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSI 392
V+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI
Sbjct: 454 VKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSI 275
Query: 393 VGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 551
+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 274 IGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 116
Score = 188 bits (406), Expect = 2e-046
Identities = 84/113 (74%), Positives = 90/113 (79%)
Frame = -2 / +3
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 117 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 296
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWT 212
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 297 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLT 455
Score = 138 bits (295), Expect = 3e-031
Identities = 63/113 (55%), Positives = 77/113 (68%)
Frame = -1 / +2
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 116 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 295
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELD 213
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD
Sbjct: 296 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELD 454
Score = 111 bits (238), Expect = 2e-023
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / -1
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 407 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 228
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 227 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 126
>gb|BP619574.1|BP619574 BP619574 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-33-M09 3',
mRNA sequence
Length = 451
Score = 246 bits (532), Expect = 6e-064
Identities = 101/113 (89%), Positives = 108/113 (95%)
Frame = +3 / -2
Query: 213 VQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSI 392
V+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI
Sbjct: 450 VKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSI 271
Query: 393 VGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 551
+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 270 IGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 112
Score = 188 bits (406), Expect = 2e-046
Identities = 84/113 (74%), Positives = 90/113 (79%)
Frame = -2 / +2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 113 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 292
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWT 212
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 293 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLT 451
Score = 138 bits (295), Expect = 3e-031
Identities = 63/113 (55%), Positives = 77/113 (68%)
Frame = -1 / +1
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 112 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 291
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGARGEELD 213
D+DHV ++ W LLT + FR Q L++ H LP QT EPS R EELD
Sbjct: 292 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELD 450
Score = 111 bits (238), Expect = 2e-023
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / -1
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 403 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 224
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 223 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 122
>dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9D7
Length = 60476
Score = 184 bits (397), Expect(3) = 7e-064
Identities = 75/83 (90%), Positives = 80/83 (96%)
Frame = +3 / +2
Query: 303 KKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISY 482
K +APAGEKP V+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISY
Sbjct: 56030 KMEAPAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISY 56209
Query: 483 KPVKHGRPGIGATHSSRFIPLK* 551
KPVKHGRPG+GAT+SSRFIPLK*
Sbjct: 56210 KPVKHGRPGVGATNSSRFIPLK* 56278
Score = 152 bits (326), Expect(3) = 6e-040
Identities = 65/87 (74%), Positives = 71/87 (81%)
Frame = -2 / -3
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RGIN EE VAP PGLPC TGL E+ENSA+* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 56277 HLRGINLEELVAPTPGLPCFTGLYEIENSAK*CPIISGLISTWLKVFPLYTPMMLPIISG 56098
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRS 290
TMIM +CVLT +GFSPAGAS F ++
Sbjct: 56097 TMIMFLKCVLTDAGFSPAGASIFCSKT 56017
Score = 105 bits (225), Expect = 1e-021
Identities = 48/86 (55%), Positives = 63/86 (73%)
Frame = -1 / -2
Query: 554 SSFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHL 375
SS +R+KP G+G T+T P VL R V D ELS+V+++HLRLDL+LV+ L+VV TN+ASNH
Sbjct: 56281 SSLERDKPGGIGSTNTRPTVLYRFV*D*ELSQVMSNHLRLDLDLVKSLSVVHTNDASNHF 56102
Query: 374 RDNDHVTEMCLDWLRLLTSRSILFRL 297
R NDHV ++C LLTS + F L
Sbjct: 56101 RHNDHVPQVCSH*CWLLTSWCLHFLL 56024
Score = 73.5 bits (154), Expect(3) = 7e-064
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +3 / +1
Query: 117 VAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRR 245
VAAG KKRTF+K+S+RGVDLDALLDMS +DLV+ F +R RRR
Sbjct: 55225 VAAGIVKKRTFKKFSFRGVDLDALLDMSIEDLVKHFSSRIRRR 55353
Score = 44.1 bits (90), Expect(3) = 7e-064
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 243 RFQRGLKRKPMALIKKLRKAKK 308
RF RGL RKPMALIKKLRKA K
Sbjct: 55434 RFSRGLTRKPMALIKKLRKAVK 55499
Score = 35.9 bits (72), Expect(3) = 6e-040
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -1 / -3
Query: 245 PSPGARGEELDEVVSGHVEKRI*VDAAVAVLAERPLLGSSGGN 117
PS E D++ GHVEKRI +D++ L E L +S N
Sbjct: 55353 PSANTGTEMFDKIFDGHVEKRIEIDSSERKLFEGSLFHNSSRN 55225
Score = 33.6 bits (67), Expect(3) = 6e-040
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 307 FFALRSFLMSAMGFLFRPLWNL 242
F ALR+FL+ A+GFL PL NL
Sbjct: 55498 FTALRNFLIKAIGFLVNPLENL 55433
>gb|AW004145.1|AW004145 701500185 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701500185, mRNA sequence
Length = 631
Score = 201 bits (433), Expect(2) = 1e-062
Identities = 83/113 (73%), Positives = 97/113 (85%)
Frame = +3 / -2
Query: 123 AGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKA 302
AG PKKRT +K++++GV LDALLDMST+DLV+LF +R RRRF RGL KPMALI LRKA
Sbjct: 591 AGVPKKRTSKKFAFKGVHLDALLDMSTNDLVKLFSSRIRRRFSRGLTCKPMALIHTLRKA 412
Query: 303 KKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYL 461
+DAP GEKPEPV+THLRNMII PEMIGSI+GVYNG+T +QVEIKPEMI Y+
Sbjct: 411 HRDAPQGEKPEPVRTHLRNMIIFPEMIGSIIGVYNGETLDQVEIKPEMIAQYV 253
Score = 116 bits (247), Expect(2) = 8e-034
Identities = 53/111 (47%), Positives = 74/111 (66%)
Frame = -1 / +1
Query: 458 VVADHLRLDLNLVEGLAVVDTNNASNHLRDNDHVTEMCLDWLRLLTSRSILFRLAQFLDE 279
V+++HLRLDLNLVE L+VV +N+ASNH R++DHV ++ W LLT I R Q +++
Sbjct: 256 VLSNHLRLDLNLVESLSVVHSNDASNHFREDDHVPQVGSHWFWLLTLWCIPVRFPQRVNQ 435
Query: 278 RHGLPLQTPLEPSPGARGEELDEVVSGHVEKRI*VDAAVAVLAERPLLGSS 126
H L QT EPS R EELD+++S H+E I +++ L RPLLG+S
Sbjct: 436 SHWLTCQTSREPSTNTR*EELDKIISRHIE*SIEMNSFEGKLLRRPLLGNS 588
Score = 103 bits (220), Expect = 7e-021
Identities = 55/105 (52%), Positives = 61/105 (58%)
Frame = -2 / +2
Query: 448 IISGLISTWLKVLPL*TPTMLPIISGTMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMG 269
IISGLISTW +V PL TP MLPIISG MIM + VLTGSGFSP GAS A S + A+G
Sbjct: 266 IISGLISTWSRVSPLYTPMMLPIISGKMIMFLKWVLTGSGFSPCGASLCAFLSV*IRAIG 445
Query: 268 FLFRPLWNLLLARAGKSWTXXXXXXXXXXXXSTPR*LYLRNVLFL 134
+PL NLL R KS T TP +VLFL
Sbjct: 446 LHVKPLENLLRIRDEKSLTRSLVDISSRASR*TPLKANFLDVLFL 580
Score = 62.0 bits (129), Expect(2) = 1e-062
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +3 / -3
Query: 462 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 551
AEFSISYKPVKH PG+GAT SSRFIPLK*
Sbjct: 251 AEFSISYKPVKHCMPGVGATDSSRFIPLK* 162
Score = 50.6 bits (104), Expect(2) = 8e-034
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = -2 / +1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSA 461
H RG+N EE VAP PG+ C TGL E+ENSA
Sbjct: 163 HLRGMNLEESVAPTPGIQCFTGLYEIENSA 252
>gb|AV532062.1|AV532062 AV532062 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB035a04F 3', mRNA sequence
Length = 508
Score = 237 bits (512), Expect = 4e-061
Identities = 96/108 (88%), Positives = 104/108 (96%)
Frame = +3 / -2
Query: 228 ARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYN 407
+R R+RF +GL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYN
Sbjct: 504 SRIRKRFSKGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYN 325
Query: 408 GKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 551
GKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 324 GKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 181
Score = 184 bits (397), Expect = 3e-045
Identities = 81/107 (75%), Positives = 87/107 (81%)
Frame = -2 / +2
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 182 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 361
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLAR 230
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R
Sbjct: 362 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIR 502
Score = 125 bits (268), Expect = 2e-027
Identities = 58/108 (53%), Positives = 72/108 (66%)
Frame = -1 / +1
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV D ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 181 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 360
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQTPLEPSPGAR 228
D+DHV ++ W LLT + FR Q L++ H LP QT EP R
Sbjct: 361 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTFREPFTNTR 504
Score = 111 bits (238), Expect = 2e-023
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +2 / -1
Query: 260 EEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*DQA 439
++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 472 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 293
Query: 440 *DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 292 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 191
>gb|BP594448.1|BP594448 BP594448 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-25-O18 3',
mRNA sequence
Length = 459
Score = 223 bits (482), Expect(2) = 3e-060
Identities = 91/99 (91%), Positives = 96/99 (96%)
Frame = +3 / -3
Query: 255 GLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEI 434
GL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEI
Sbjct: 406 GLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEI 227
Query: 435 KPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 551
KPEMIGHYLAEFS SYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 226 KPEMIGHYLAEFSTSYKPVKHGRPGVGATHSSRFIPLK* 110
Score = 177 bits (380), Expect = 6e-043
Identities = 76/99 (76%), Positives = 82/99 (82%)
Frame = -2 / +3
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 371
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 111 HLRGMNLEEWVAPTPGLPCLTGLYEVENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 290
Query: 370 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRP 254
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +P
Sbjct: 291 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKP 407
Score = 118 bits (253), Expect = 2e-025
Identities = 54/99 (54%), Positives = 68/99 (68%)
Frame = -1 / +2
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRLDLNLVEGLAVVDTNNASNHLR 372
S + N+ VG T+T P VLDRLV ELS+VV +HLRLDLNLVE L+VV +N+ASNH R
Sbjct: 110 SLKGNESGRVGSTNTRPTVLDRLV*GRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 289
Query: 371 DNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQT 255
D+DHV ++ W LLT + FR Q L++ H LP QT
Sbjct: 290 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQT 406
Score = 113 bits (242), Expect = 6e-024
Identities = 52/96 (54%), Positives = 68/96 (70%)
Frame = +2 / -2
Query: 254 GSEEEAHGAHQETAQGEKGCSCW*EA*ASQDTSP*HDHCP*DDWKHCWCLQRQDLQPG*D 433
G ++EA+G+ E + EKG + *EA S++ HDH P*+DWKH W +QR+D QPG*D
Sbjct: 407 GFDKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*D 228
Query: 434 QA*DDRPLPC*VLHLLQAGQARQARYRCHPLLAVYS 541
QA*DD LP *VL+L+QAGQAR A C+PL ++S
Sbjct: 227 QA*DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 120
Score = 31.3 bits (62), Expect(2) = 3e-060
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3 / -2
Query: 204 DDLVQLFPARARRRFQRGLKRK 269
DDLV+LF +R RRF RG ++
Sbjct: 458 DDLVKLFSSRIPRRFSRGFDKE 393
>gb|BP618355.1|BP618355 BP618355 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-27-P19 3',
mRNA sequence
Length = 453
Score = 160 bits (344), Expect(2) = 3e-060
Identities = 66/77 (85%), Positives = 72/77 (93%)
Frame = +3 / -3
Query: 204 DDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLRNMIIVPEMI 383
DDLV+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMI
Sbjct: 451 DDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMI 272
Query: 384 GSIVGVYNGKTFNQVEI 434
GSI+GVYNGKTFNQVEI
Sbjct: 271 GSIIGVYNGKTFNQVEI 221
Score = 116 bits (247), Expect(2) = 2e-041
Identities = 53/75 (70%), Positives = 57/75 (76%)
Frame = -2 / +3
Query: 436 LISTWLKVLPL*TPTMLPIISGTMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFR 257
LISTWLKV PL TP MLPIISGTMIM + VLTGSGFSP GAS FA SFL+ A+GFL +
Sbjct: 219 LISTWLKVFPLYTPMMLPIISGTMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVK 398
Query: 256 PLWNLLLARAGKSWT 212
PL NLL R KS T
Sbjct: 399 PLENLLRIREEKSLT 443
Score = 94.5 bits (200), Expect(2) = 3e-060
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3 / -2
Query: 435 KPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 551
+PEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 221 QPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 105
Score = 94.5 bits (200), Expect(2) = 4e-027
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = -1 / +2
Query: 434 DLNLVEGLAVVDTNNASNHLRDNDHVTEMCLDWLRLLTSRSILFRLAQFLDERHGLPLQT 255
DLNLVE L+VV +N+ASNH RD+DHV ++ W LLT + FR Q L++ H LP QT
Sbjct: 221 DLNLVESLSVVHSNDASNHFRDDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQT 400
Query: 254 PLEPSPGARGEELDEVV 204
EPS R EELD+++
Sbjct: 401 SREPSTNTRREELDKII 451
Score = 75.8 bits (159), Expect(2) = 2e-041
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = -2 / +1
Query: 550 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISG 437
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISG
Sbjct: 106 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISG 219
Score = 49.6 bits (102), Expect(2) = 4e-027
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = -1 / +3
Query: 551 SFQRNKPRGVGGTDTGPAVLDRLVGDGELSKVVADHLRL 435
S + N+ VG T+T P VLDRLV D ELS+VV +HLRL
Sbjct: 105 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRL 221
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,432,918,298
Number of Sequences: 1013581
Number of extensions: 17631946
Number of successful extensions: 107812
Number of sequences better than 1.0e-020: 216
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 56630543420
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)