BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCT19a08.yg.2.1
(645 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE606424.1|BE606424 WHE0904_G11_N22ZS Wheat 5-15 DAP spi... 339 1e-091
gb|CN012120.1|CN012120 WHE3892_G05_M10ZS Wheat Fusarium gra... 339 1e-091
gb|BM068644.1|BM068644 WHE3461_A09_B17ZS Wheat pre-anthesis... 163 2e-038
gb|CA712741.1|CA712741 wdk3c.pk006.d13 wdk3c Triticum aesti... 123 2e-026
gb|AL814447.1|AL814447 AL814447 h:116 Triticum aestivum cDN... 117 1e-024
gb|CD885617.1|CD885617 G118.001P04R010921 G118 Triticum aes... 78 8e-013
gb|CA624587.1|CA624587 wl1n.pk0121.c6 wl1n Triticum aestivu... 62 5e-008
gb|CV780363.1|CV780363 FGAS074772 Triticum aestivum FGAS: L... 60 2e-007
gb|BQ839459.1|BQ839459 WHE4166_D03_H06ZS Wheat CS whole pla... 54 1e-005
gb|CA618918.1|CA618918 wl1n.pk0045.f6 wl1n Triticum aestivu... 54 1e-005
gb|CD892775.1|CD892775 G118.121O12R010927 G118 Triticum aes... 54 1e-005
gb|CK212514.1|CK212514 FGAS024389 Triticum aestivum FGAS: L... 54 1e-005
gb|BG906163.1|BG906163 TaLr1146H01F TaLr1 Triticum aestivum... 50 2e-004
gb|CA742506.1|CA742506 wri1s.pk001.g22 wri1s Triticum aesti... 50 2e-004
gb|CD894732.1|CD894732 G118.126P13F010823 G118 Triticum aes... 50 2e-004
gb|CD894733.1|CD894733 G118.126P13R011119 G118 Triticum aes... 50 2e-004
gb|CV772982.1|CV772982 FGAS067377 Triticum aestivum FGAS: L... 50 2e-004
gb|CA663590.1|CA663590 wlmk1.pk0035.f2 wlmk1 Triticum aesti... 48 8e-004
gb|BQ237016.1|BQ237016 TaE05023E11F TaE05 Triticum aestivum... 46 0.003
gb|BE428750.1|BE428750 MTD010.D12F990617 ITEC MTD Durum Whe... 44 0.012
gb|BE429018.1|BE429018 MTD013.D05F990621 ITEC MTD Durum Whe... 44 0.012
gb|BE430565.1|BE430565 SUN004.C06R991213 ITEC SUN Wheat cDN... 44 0.012
gb|BJ281306.1|BJ281306 BJ281306 Y. Ogihara unpublished cDNA... 44 0.012
gb|BQ743475.1|BQ743475 WHE4104_D09_H18ZS Wheat salt-stresse... 44 0.012
gb|CK195720.1|CK195720 FGAS004163 Triticum aestivum FGAS: L... 44 0.012
gb|CK208184.1|CK208184 FGAS019866 Triticum aestivum FGAS: L... 44 0.012
gb|DR736794.1|DR736794 FGAS082164 Triticum aestivum FGAS: L... 44 0.012
gb|BQ904479.1|BQ904479 Ta04_01a07_R Ta04_AAFC_ECORC_Fusariu... 42 0.046
gb|CK208379.1|CK208379 FGAS020091 Triticum aestivum FGAS: L... 40 0.18
gb|DR736891.1|DR736891 FGAS082261 Triticum aestivum FGAS: L... 40 0.18
>gb|BE606424.1|BE606424 WHE0904_G11_N22ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0904_G11_N22, mRNA sequence
Length = 537
Score = 339 bits (171), Expect = 1e-091
Identities = 324/375 (86%)
Strand = Plus / Plus
Query: 1 gatccaccccatcaacaacggcctcgactcctgcgtcccgccggaggtcggcttgctccg 60
||||| || |||||||||||||||| ||| ||| |||||||||||||||| |||||||
Sbjct: 133 gatcctcctcatcaacaacggcctcacctcgtgcctcccgccggaggtcgggatgctccg 192
Query: 61 ggaggtgaccgtcttcgacgtcagcttcaactcgctcgttggcccgctgccgcagcaggt 120
||||||||| || |||||||||||||||||| | |||| ||||||||||||| | ||||
Sbjct: 193 ggaggtgacggtgttcgacgtcagcttcaacgccctcgcaggcccgctgccgccggaggt 252
Query: 121 ggccgggatgcgcaaggtggagcagctggacgtcgcgcacaaccgcctgtccggggccgt 180
|||| |||||| |||||||||||||| ||| |||||||||||| ||||| ||| ||||
Sbjct: 253 ggccaggatgcaaaaggtggagcagctcgacatcgcgcacaacctgctgtcggggaccgt 312
Query: 181 cccggaggccatctgcgccctcccgcggctcaagaacctgaccatctcctacaacttctt 240
||||||||| | |||| |||||| |||||||||||| | ||| ||||||||||||||||
Sbjct: 313 gccggaggccgtgtgcgacctcccacggctcaagaacttcaccttctcctacaacttctt 372
Query: 241 caccggcgagccgccgtcctgcgcgcgcgtcgtgccttcggacggtgacaggaggaactg 300
||||||||||||||||||||||||||||||| ||||| | ||||| ||| | |||||||
Sbjct: 373 caccggcgagccgccgtcctgcgcgcgcgtcctgcctgccgacggcgaccgccggaactg 432
Query: 301 cctgcccaaccgccccacacagcgcacgccgcagcagtgcgccgcgttctactcgcagcc 360
||| || ||||||||| | ||||||| |||||||||||||||||| ||||| | | ||
Sbjct: 433 cctcccaaaccgccccgcccagcgcatgccgcagcagtgcgccgctttctatgcccgccc 492
Query: 361 gcccgtcgactgcgc 375
|||||||||||||||
Sbjct: 493 gcccgtcgactgcgc 507
>gb|CN012120.1|CN012120 WHE3892_G05_M10ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3892_G05_M10,
mRNA sequence
Length = 653
Score = 339 bits (171), Expect = 1e-091
Identities = 324/375 (86%)
Strand = Plus / Plus
Query: 1 gatccaccccatcaacaacggcctcgactcctgcgtcccgccggaggtcggcttgctccg 60
||||| || |||||||||||||||| ||| ||| |||||||||||||||| |||||||
Sbjct: 242 gatcctcctcatcaacaacggcctcacctcgtgcctcccgccggaggtcgggatgctccg 301
Query: 61 ggaggtgaccgtcttcgacgtcagcttcaactcgctcgttggcccgctgccgcagcaggt 120
||||||||| || |||||||||||||||||| | |||| ||||||||||||| | ||||
Sbjct: 302 ggaggtgacggtgttcgacgtcagcttcaacgccctcgcaggcccgctgccgccggaggt 361
Query: 121 ggccgggatgcgcaaggtggagcagctggacgtcgcgcacaaccgcctgtccggggccgt 180
|||| |||||| |||||||||||||| ||| |||||||||||| ||||| ||| ||||
Sbjct: 362 ggccaggatgcaaaaggtggagcagctcgacatcgcgcacaacctgctgtcggggaccgt 421
Query: 181 cccggaggccatctgcgccctcccgcggctcaagaacctgaccatctcctacaacttctt 240
||||||||| | |||| |||||| |||||||||||| | ||| ||||||||||||||||
Sbjct: 422 gccggaggccgtgtgcgacctcccacggctcaagaacttcaccttctcctacaacttctt 481
Query: 241 caccggcgagccgccgtcctgcgcgcgcgtcgtgccttcggacggtgacaggaggaactg 300
||||||||||||||||||||||||||||||| ||||| | ||||| ||| | |||||||
Sbjct: 482 caccggcgagccgccgtcctgcgcgcgcgtcctgcctgccgacggcgaccgccggaactg 541
Query: 301 cctgcccaaccgccccacacagcgcacgccgcagcagtgcgccgcgttctactcgcagcc 360
||| || ||||||||| | ||||||| |||||||||||||||||| ||||| | | ||
Sbjct: 542 cctcccaaaccgccccgcccagcgcatgccgcagcagtgcgccgctttctatgcccgccc 601
Query: 361 gcccgtcgactgcgc 375
|||||||||||||||
Sbjct: 602 gcccgtcgactgcgc 616
>gb|BM068644.1|BM068644 WHE3461_A09_B17ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3461_A09_B17, mRNA sequence
Length = 517
Score = 163 bits (82), Expect = 2e-038
Identities = 115/126 (91%)
Strand = Plus / Plus
Query: 225 tctcctacaacttcttcaccggcgagccgccgtcctgcgcgcgcgtcgtgccttcggacg 284
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 10 tctcctacaacttcttcaccggcgagccgccgtcctgcgcgcgcgtcgtgcctgccgacg 69
Query: 285 gtgacaggaggaactgcctgcccaaccgccccacacagcgcacgccgcagcagtgcgccg 344
| ||| | |||||||||| |||||||||||| | ||||||| |||||||||||||||||
Sbjct: 70 gcgaccgccggaactgcctccccaaccgccccgcccagcgcatgccgcagcagtgcgccg 129
Query: 345 cgttct 350
| ||||
Sbjct: 130 ctttct 135
Score = 77.8 bits (39), Expect = 8e-013
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 373 cgccatcataccccggcccgttgccaccggtataccctatgccgtacgcatcgcctccgc 432
||||| |||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 205 cgccagcataccccggcccgttgccaccagtataccccatgccatacgcgtcgccgccgc 264
Query: 433 cacctgcgcagtaccgatgattc 455
| ||| | | ||||||||||||
Sbjct: 265 cgcctccacgttaccgatgattc 287
Score = 50.1 bits (25), Expect = 2e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 584 gttcttgattgatagctaccggcatatagaaga 616
||||||||||||||||||||||| || ||||||
Sbjct: 410 gttcttgattgatagctaccggcgtaaagaaga 442
>gb|CA712741.1|CA712741 wdk3c.pk006.d13 wdk3c Triticum aestivum cDNA clone wdk3c.pk006.d13
5' end, mRNA sequence
Length = 554
Score = 123 bits (62), Expect = 2e-026
Identities = 289/364 (79%), Gaps = 1/364 (0%)
Strand = Plus / Minus
Query: 10 catcaacaacggcctcgactcctgcgtcccgccggaggtcggcttgctccgggaggtgac 69
|||||||||||||||||| || ||| | ||||||||| ||||| | |||||| | ||
Sbjct: 442 catcaacaacggcctcgagtcatgcctgccgccggagctcggccgcntgcgggagctcac 383
Query: 70 cgtcttcgacgtcagcttcaactcgctcgttggcccgctgc-cgcagcaggtggccggga 128
|| |||| |||||| |||| ||||| |||||||| | ||||| ||||||| |||
Sbjct: 382 ggtgctcgatgtcagccacaaccagctcgccggcccgcttcacgcaggaggtggcggggc 323
Query: 129 tgcgcaaggtggagcagctggacgtcgcgcacaaccgcctgtccggggccgtcccggagg 188
|| | ||| |||||||||| ||||||||||||||| || ||||| | | ||| |||
Sbjct: 322 tgaggaagctggagcagctcaacgtcgcgcacaacctgctctccggcccgataccgcagg 263
Query: 189 ccatctgcgccctcccgcggctcaagaacctgaccatctcctacaacttcttcaccggcg 248
|| | ||||| || |||||||||||||| | ||| |||| ||||||||||||||||| |
Sbjct: 262 ccgtgtgcgcgctgccgcggctcaagaatttcaccttctcatacaacttcttcaccgggg 203
Query: 249 agccgccgtcctgcgcgcgcgtcgtgccttcggacggtgacaggaggaactgcctgccca 308
|||||||| | ||||||||||||||||| || | | ||| || ||||||||||| |
Sbjct: 202 agccgccggcgtgcgcgcgcgtcgtgccccggggcagcgaccgggacaactgcctgccga 143
Query: 309 accgccccacacagcgcacgccgcagcagtgcgccgcgttctactcgcagccgcccgtcg 368
| |||||| | ||||| |||| ||||||||||||||| || ||| | || |||||||||
Sbjct: 142 atcgcccctctcagcggacgcggcagcagtgcgccgccttntacgcccacccgcccgtca 83
Query: 369 actg 372
||||
Sbjct: 82 actg 79
>gb|AL814447.1|AL814447 AL814447 h:116 Triticum aestivum cDNA clone B04_h116_plate_11, mRNA
sequence
Length = 581
Score = 117 bits (59), Expect = 1e-024
Identities = 287/363 (79%)
Strand = Plus / Plus
Query: 10 catcaacaacggcctcgactcctgcgtcccgccggaggtcggcttgctccgggaggtgac 69
|||||||||||||||||| || ||| | ||||||||| ||||| || |||||| | ||
Sbjct: 212 catcaacaacggcctcgagtcgtgcctgccgccggagatcggccgcctgcgggagctcac 271
Query: 70 cgtcttcgacgtcagcttcaactcgctcgttggcccgctgccgcagcaggtggccgggat 129
|| |||| |||||| |||| ||||| |||||||| ||||| ||||||| ||| |
Sbjct: 272 ggtgctcgatgtcagccacaaccagctcgccggcccgctcacgcaggaggtggcggggct 331
Query: 130 gcgcaaggtggagcagctggacgtcgcgcacaaccgcctgtccggggccgtcccggaggc 189
| | ||| ||||||| || ||||||||||||||| || |||||| | | || ||||
Sbjct: 332 gaggaagctggagcaactcaacgtcgcgcacaacctgctctccgggccgataccccaggc 391
Query: 190 catctgcgccctcccgcggctcaagaacctgaccatctcctacaacttcttcaccggcga 249
| | || || || ||||||||||||||| | ||| |||| ||||| ||||||||||| ||
Sbjct: 392 cgtgtgtgctctgccgcggctcaagaacttcaccttctcatacaatttcttcaccgggga 451
Query: 250 gccgccgtcctgcgcgcgcgtcgtgccttcggacggtgacaggaggaactgcctgcccaa 309
||||||| | ||||||||||||||||| || | | ||| || ||||||||||| ||
Sbjct: 452 gccgccggcgtgcgcgcgcgtcgtgccccggggcagcgaccgggacaactgcctgccgaa 511
Query: 310 ccgccccacacagcgcacgccgcagcagtgcgccgcgttctactcgcagccgcccgtcga 369
||||| | ||||| |||| ||||||||||||||| |||||| | || ||||||||| |
Sbjct: 512 tcgcccttctcagcggacgcggcagcagtgcgccgccttctacgcccacccgcccgtcaa 571
Query: 370 ctg 372
|||
Sbjct: 572 ctg 574
>gb|CD885617.1|CD885617 G118.001P04R010921 G118 Triticum aestivum cDNA clone G118001P04,
mRNA sequence
Length = 630
Score = 77.8 bits (39), Expect = 8e-013
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 373 cgccatcataccccggcccgttgccaccggtataccctatgccgtacgcatcgcctccgc 432
||||| |||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 617 cgccagcataccccggcccgttgccaccagtataccccatgccatacgcgtcgccgccgc 558
Query: 433 cacctgcgcagtaccgatgattc 455
| ||| | | ||||||||||||
Sbjct: 557 cgcctccacgttaccgatgattc 535
Score = 50.1 bits (25), Expect = 2e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 584 gttcttgattgatagctaccggcatatagaaga 616
||||||||||||||||||||||| || ||||||
Sbjct: 412 gttcttgattgatagctaccggcgtaaagaaga 380
>gb|CA624587.1|CA624587 wl1n.pk0121.c6 wl1n Triticum aestivum cDNA clone wl1n.pk0121.c6 5'
end, mRNA sequence
Length = 280
Score = 61.9 bits (31), Expect = 5e-008
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 373 cgccatcataccccggcccgttgccaccggtataccctatgccgtacgcatcgcctccgc 432
||||| ||||||||||||||||||| || || ||||| ||||| ||||| ||||| ||||
Sbjct: 96 cgccagcataccccggcccgttgccgccagtgtaccccatgccatacgcgtcgccgccgc 155
Query: 433 cacctgcgcagtaccgatgattc 455
| ||| | | ||||||||||||
Sbjct: 156 cgcctccacgttaccgatgattc 178
Score = 48.1 bits (24), Expect = 8e-004
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 328 gccgcagcagtgcgccgcgttctactcgcagccgcccgtcgactgcgc 375
|||||||||||||||||| ||||| | | |||||||||||||||||
Sbjct: 4 gccgcagcagtgcgccgctttctatgcccgcccgcccgtcgactgcgc 51
>gb|CV780363.1|CV780363 FGAS074772 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1038
Score = 60.0 bits (30), Expect = 2e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 386 cggcccgttgccaccggtataccctatgccgtacgcatcgcctccgccacctgcgcagta 445
||||||||||||||| |||||||| ||||| ||||| ||||| ||||| ||| | | ||
Sbjct: 170 cggcccgttgccaccagtataccccatgccatacgcgtcgccgccgccgcctccacgtta 229
Query: 446 ccgatgattc 455
||||||||||
Sbjct: 230 ccgatgattc 239
Score = 50.1 bits (25), Expect = 2e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 584 gttcttgattgatagctaccggcatatagaaga 616
||||||||||||||||||||||| || ||||||
Sbjct: 361 gttcttgattgatagctaccggcgtaaagaaga 393
>gb|BQ839459.1|BQ839459 WHE4166_D03_H06ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4166_D03_H06, mRNA sequence
Length = 434
Score = 54.0 bits (27), Expect = 1e-005
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 120 tggccgggatgcgcaaggtggagcagctggacgtcgcgcacaaccgcctgtccggggccg 179
|||| ||||||||| | |||||||||||||||| ||||||||| || ||||| |
Sbjct: 133 tggcggggatgcgcgcgctggagcagctggacgtggcgcacaacgagctcgccgggcaca 192
Query: 180 tcccggaggccatctgcgccctcccgcggct 210
||||||||| ||||||||| || ||||||||
Sbjct: 193 tcccggagggcatctgcgcgctgccgcggct 223
>gb|CA618918.1|CA618918 wl1n.pk0045.f6 wl1n Triticum aestivum cDNA clone wl1n.pk0045.f6 5'
end, mRNA sequence
Length = 434
Score = 54.0 bits (27), Expect = 1e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 139 ggagcagctggacgtcgcgcacaaccg 165
|||||||||||||||||||||||||||
Sbjct: 314 ggagcagctggacgtcgcgcacaaccg 340
>gb|CD892775.1|CD892775 G118.121O12R010927 G118 Triticum aestivum cDNA clone G118121O12,
mRNA sequence
Length = 541
Score = 54.0 bits (27), Expect = 1e-005
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 120 tggccgggatgcgcaaggtggagcagctggacgtcgcgcacaaccgcctgtccggggccg 179
|||| ||||||||| | |||||||||||||||| ||||||||| || ||||| |
Sbjct: 440 tggcggggatgcgcgcgctggagcagctggacgtggcgcacaacgagctcgccgggcaca 381
Query: 180 tcccggaggccatctgcgccctcccgcggct 210
||||||||| ||||||||| || ||||||||
Sbjct: 380 tcccggagggcatctgcgcgctgccgcggct 350
>gb|CK212514.1|CK212514 FGAS024389 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1094
Score = 54.0 bits (27), Expect = 1e-005
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 120 tggccgggatgcgcaaggtggagcagctggacgtcgcgcacaaccgcctgtccggggccg 179
|||| ||||||||| | |||||||||||||||| ||||||||| || ||||| |
Sbjct: 538 tggcggggatgcgcgcgctggagcagctggacgtggcgcacaacgagctcgccgggcaca 479
Query: 180 tcccggaggccatctgcgccctcccgcggct 210
||||||||| ||||||||| || ||||||||
Sbjct: 478 tcccggagggcatctgcgcgcttccgcggct 448
>gb|BG906163.1|BG906163 TaLr1146H01F TaLr1 Triticum aestivum cDNA clone TaLr1146H01 3',
mRNA sequence
Length = 629
Score = 50.1 bits (25), Expect = 2e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 584 gttcttgattgatagctaccggcatatagaaga 616
||||||||||||||||||||||| || ||||||
Sbjct: 521 gttcttgattgatagctaccggcgtaaagaaga 489
>gb|CA742506.1|CA742506 wri1s.pk001.g22 wri1s Triticum aestivum cDNA clone wri1s.pk001.g22
5' end, mRNA sequence
Length = 553
Score = 50.1 bits (25), Expect = 2e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 584 gttcttgattgatagctaccggcatatagaaga 616
||||||||||||||||||||||| || ||||||
Sbjct: 41 gttcttgattgatagctaccggcgtaaagaaga 73
>gb|CD894732.1|CD894732 G118.126P13F010823 G118 Triticum aestivum cDNA clone G118126P13,
mRNA sequence
Length = 699
Score = 50.1 bits (25), Expect = 2e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 584 gttcttgattgatagctaccggcatatagaaga 616
||||||||||||||||||||||| || ||||||
Sbjct: 181 gttcttgattgatagctaccggcgtaaagaaga 213
>gb|CD894733.1|CD894733 G118.126P13R011119 G118 Triticum aestivum cDNA clone G118126P13,
mRNA sequence
Length = 701
Score = 50.1 bits (25), Expect = 2e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 584 gttcttgattgatagctaccggcatatagaaga 616
||||||||||||||||||||||| || ||||||
Sbjct: 522 gttcttgattgatagctaccggcgtaaagaaga 490
>gb|CV772982.1|CV772982 FGAS067377 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 850
Score = 50.1 bits (25), Expect = 2e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 584 gttcttgattgatagctaccggcatatagaaga 616
||||||||||||||||||||||| || ||||||
Sbjct: 673 gttcttgattgatagctaccggcgtaaagaaga 641
>gb|CA663590.1|CA663590 wlmk1.pk0035.f2 wlmk1 Triticum aestivum cDNA clone wlmk1.pk0035.f2
5' end, mRNA sequence
Length = 533
Score = 48.1 bits (24), Expect = 8e-004
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 138 tggagcagctggacgtcgcgcacaaccgcctgtccggggccgtcccggaggccatctgcg 197
|||||||||| ||||||||||||||| || ||||| | ||||||||| ||||||||
Sbjct: 399 tggagcagctngacgtcgcgcacaacgagctcgccgggcacatcccggagggcatctgcg 340
Query: 198 ccctcccgcggct 210
| | ||||||||
Sbjct: 339 cgntnccgcggct 327
>gb|BQ237016.1|BQ237016 TaE05023E11F TaE05 Triticum aestivum cDNA clone TaE05023E11F, mRNA
sequence
Length = 576
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 580 tagtgttcttgattgatagctaccggc 606
||||||||||||||||| |||||||||
Sbjct: 448 tagtgttcttgattgatggctaccggc 422
>gb|BE428750.1|BE428750 MTD010.D12F990617 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD010.D12, mRNA
sequence
Length = 400
Score = 44.1 bits (22), Expect = 0.012
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 tggagcagctggacgtcgcgcacaac 163
|||||||||| |||||||||||||||
Sbjct: 244 tggagcagctcgacgtcgcgcacaac 269
>gb|BE429018.1|BE429018 MTD013.D05F990621 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD013.D05, mRNA
sequence
Length = 402
Score = 44.1 bits (22), Expect = 0.012
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 tggagcagctggacgtcgcgcacaac 163
|||||||||| |||||||||||||||
Sbjct: 244 tggagcagctcgacgtcgcgcacaac 269
>gb|BE430565.1|BE430565 SUN004.C06R991213 ITEC SUN Wheat cDNA Library Triticum aestivum
cDNA clone SUN004.C06, mRNA sequence
Length = 569
Score = 44.1 bits (22), Expect = 0.012
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 138 tggagcagctggacgtcgcgcacaac 163
|||||||||| |||||||||||||||
Sbjct: 504 tggagcagctcgacgtcgcgcacaac 479
>gb|BJ281306.1|BJ281306 BJ281306 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr21g20 5', mRNA sequence
Length = 600
Score = 44.1 bits (22), Expect = 0.012
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 tggagcagctggacgtcgcgcacaac 163
|||||||||| |||||||||||||||
Sbjct: 536 tggagcagctcgacgtcgcgcacaac 561
>gb|BQ743475.1|BQ743475 WHE4104_D09_H18ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4104_D09_H18, mRNA sequence
Length = 486
Score = 44.1 bits (22), Expect = 0.012
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 tggagcagctggacgtcgcgcacaac 163
|||||||||| |||||||||||||||
Sbjct: 154 tggagcagctcgacgtcgcgcacaac 179
>gb|CK195720.1|CK195720 FGAS004163 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 840
Score = 44.1 bits (22), Expect = 0.012
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 209 ctcaagaacctgaccatctcctacaacttcttcaccggcgagccgc 254
||||||||||| ||| |||| ||||||||||| |||||||||||
Sbjct: 492 ctcaagaacctcacctactcccacaacttcttctgcggcgagccgc 447
>gb|CK208184.1|CK208184 FGAS019866 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1178
Score = 44.1 bits (22), Expect = 0.012
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 138 tggagcagctggacgtcgcgcacaac 163
|||||||||| |||||||||||||||
Sbjct: 455 tggagcagctcgacgtcgcgcacaac 430
>gb|DR736794.1|DR736794 FGAS082164 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1120
Score = 44.1 bits (22), Expect = 0.012
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 tggagcagctggacgtcgcgcacaac 163
|||||||||| |||||||||||||||
Sbjct: 876 tggagcagctcgacgtcgcgcacaac 901
>gb|BQ904479.1|BQ904479 Ta04_01a07_R
Ta04_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta04_01a07, mRNA
sequence
Length = 506
Score = 42.1 bits (21), Expect = 0.046
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 584 gttcttgattgatagctaccggcatatagaaga 616
||||||| ||||||||||||||| || ||||||
Sbjct: 477 gttcttggttgatagctaccggcgtaaagaaga 445
>gb|CK208379.1|CK208379 FGAS020091 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1123
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 103 cccgctgccgcagcaggtgg 122
||||||||||||||||||||
Sbjct: 650 cccgctgccgcagcaggtgg 669
>gb|DR736891.1|DR736891 FGAS082261 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1118
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 103 cccgctgccgcagcaggtgg 122
||||||||||||||||||||
Sbjct: 649 cccgctgccgcagcaggtgg 630
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 155,573
Number of Sequences: 636343
Number of extensions: 155573
Number of successful extensions: 44607
Number of sequences better than 0.5: 30
Number of HSP's better than 0.5 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44542
Number of HSP's gapped (non-prelim): 61
length of query: 645
length of database: 367,240,239
effective HSP length: 19
effective length of query: 626
effective length of database: 355,149,722
effective search space: 222323725972
effective search space used: 222323725972
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)