BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCH22b04.yg.2.1
(457 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ258005.1|BJ258005 BJ258005 Y. Ogihara unpublished cDNA... 492 e-137
gb|BJ248433.1|BJ248433 BJ248433 Y. Ogihara unpublished cDNA... 440 e-122
gb|BF201678.1|BF201678 WHE1774_D02_H04ZS Wheat pre-anthesis... 432 e-120
gb|BJ291570.1|BJ291570 BJ291570 Y. Ogihara unpublished cDNA... 349 1e-094
gb|BU099966.1|BU099966 WHE3313_E10_I19ZS Chinese Spring whe... 347 4e-094
gb|CK207508.1|CK207508 FGAS019132 Triticum aestivum FGAS: L... 343 6e-093
gb|CK207510.1|CK207510 FGAS019134 Triticum aestivum FGAS: L... 343 6e-093
gb|CA629836.1|CA629836 wle1n.pk0011.g6 wle1n Triticum aesti... 315 1e-084
gb|BE425679.1|BE425679 WHE0303_C11_C11ZS Wheat unstressed s... 224 4e-057
gb|CK208981.1|CK208981 FGAS020710 Triticum aestivum FGAS: L... 206 1e-051
gb|AL820281.1|AL820281 AL820281 N:130 Triticum aestivum cDN... 170 5e-041
gb|BJ302749.1|BJ302749 BJ302749 Y. Ogihara unpublished cDNA... 168 2e-040
gb|CD924992.1|CD924992 G750.115H01F010709 G750 Triticum aes... 153 1e-035
gb|BJ212260.1|BJ212260 BJ212260 Y. Ogihara unpublished cDNA... 109 2e-022
gb|BQ238899.1|BQ238899 TaE05039H01R TaE05 Triticum aestivum... 109 2e-022
gb|CK170680.1|CK170680 FGAS045652 Triticum aestivum FGAS: T... 103 1e-020
gb|BQ167265.1|BQ167265 WHE0061_C03_F05ZK Cheyenne wheat end... 96 3e-018
gb|CN012003.1|CN012003 WHE3891_D11_G21ZS Wheat Fusarium gra... 84 1e-014
gb|CD907358.1|CD907358 G468.106L06F010813 G468 Triticum aes... 74 9e-012
gb|CD922290.1|CD922290 G750.102C14F010528 G750 Triticum aes... 74 9e-012
gb|BQ246776.1|BQ246776 TaE15005F07R TaE15 Triticum aestivum... 72 4e-011
gb|BF483237.1|BF483237 WHE1787_E05_I09ZS Wheat pre-anthesis... 70 1e-010
gb|BI479008.1|BI479008 WHE2951_B02_C03ZS Wheat dormant embr... 70 1e-010
gb|CA502249.1|CA502249 WHE4044_G11_N22ZT Wheat meiotic anth... 68 6e-010
gb|BJ271854.1|BJ271854 BJ271854 Y. Ogihara unpublished cDNA... 62 4e-008
gb|CK206477.1|CK206477 FGAS018072 Triticum aestivum FGAS: L... 60 1e-007
gb|BF473458.1|BF473458 WHE0924_F07_L14ZS Wheat 5-15 DAP spi... 46 0.002
gb|CA632412.1|CA632412 wle1n.pk0053.b3 wle1n Triticum aesti... 44 0.008
>gb|BJ258005.1|BJ258005 BJ258005 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh5h11 5', mRNA sequence
Length = 681
Score = 492 bits (248), Expect = e-137
Identities = 401/452 (88%)
Strand = Plus / Plus
Query: 6 gagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgct 65
|||| ||||||| |||||||| |||||||| || ||| |||| |||||||||||||||||
Sbjct: 204 gagtcactttgcaatgaaggtgatggataaaacatctctggctagtcggaagaagctgct 263
Query: 66 tcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccct 125
|| || ||||||||||||||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 264 ccgggcacagaccgagcgggagatactgcagtccctggatcatccatttctgccgaccct 323
Query: 126 gtatactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagg 185
|||||||| |||||||| ||||||||||| || |||||||||| ||||||||||||||
Sbjct: 324 atatactcattttgagacggacaagttttcgtgtctggttatggagttctgccctggagg 383
Query: 186 ggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaa 245
||| | ||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 384 ggacttgcacactcttcgacaaaggcagcctggaaaacatttttcagagcaagcagcaaa 443
Query: 246 gttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatata 305
|||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 444 gttctatgtagcagaggtgctccttgcattggagtacctgcatatgctcgggattatata 503
Query: 306 ccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctgtcgga 365
||||||||| || ||||| |||||||| |||||||| ||||| |||||||||||| | ||
Sbjct: 504 ccgtgatctcaagccagaaaatgtcctagttcgggaggatgggcacatcatgctgactga 563
Query: 366 cttcgatctatctcttcgctgttcagtgagcctaacggtgatcaagtccgcaaatcctgg 425
|| || || |||||||| ||||||||||||| ||| ||||||| | |||||||||||
Sbjct: 564 ttttgacctctctcttcgttgttcagtgagcccaaccgtgatcaggggtgcaaatcctgg 623
Query: 426 cctagatgcaatgcagaggaacaatgcagcgt 457
| ||||||| |||||||||||||||||||||
Sbjct: 624 cttagatgcgctgcagaggaacaatgcagcgt 655
>gb|BJ248433.1|BJ248433 BJ248433 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf6d23 5', mRNA sequence
Length = 488
Score = 440 bits (222), Expect = e-122
Identities = 393/452 (86%)
Strand = Plus / Plus
Query: 6 gagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgct 65
|||| ||||||| |||||||| |||||||| || ||| |||| |||||||||||||||||
Sbjct: 8 gagtcactttgcaatgaaggtgatggataaaacatctctggctagtcggaagaagctgct 67
Query: 66 tcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccct 125
|| || ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 68 ccgggcgcagaccgagcgggagatactgcagtccctggatcatccatttctgccaaccct 127
Query: 126 gtatactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagg 185
|||||||| |||||||| ||||||||||| || |||||||| ||||||||||| ||
Sbjct: 128 atatactcattttgagacggacaagttttcgtgtctggttatgnntttctgccctggcgg 187
Query: 186 ggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaa 245
||| | ||||| ||||| || |||||||||||||| ||||||||||||||||||||||
Sbjct: 188 ggacttgcacacccttcgacannggcagcctggaaaacatttttcagagcaagcagcaaa 247
Query: 246 gttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatata 305
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 248 gttctatgtagcagaggtgctccttgcattggagtacctgcatatgcttgggattatata 307
Query: 306 ccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctgtcgga 365
||||||||| || ||||| |||||||| |||||||| ||||| |||||||||||| | ||
Sbjct: 308 ccgtgatctcaagccagaaaatgtcctagttcgggaggatgggcacatcatgctgactga 367
Query: 366 cttcgatctatctcttcgctgttcagtgagcctaacggtgatcaagtccgcaaatcctgg 425
|| || || |||||||| ||||||||||||| ||| ||||||| | |||||||||||
Sbjct: 368 ttttgacctctctcttcgttgttcagtgagcccaaccgtgatcaggggtgcaaatcctgg 427
Query: 426 cctagatgcaatgcagaggaacaatgcagcgt 457
| |||| || |||| ||||| |||||| |||
Sbjct: 428 cttagacgcgctgcanaggaataatgcancgt 459
>gb|BF201678.1|BF201678 WHE1774_D02_H04ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1774_D02_H04, mRNA sequence
Length = 453
Score = 432 bits (218), Expect = e-120
Identities = 356/402 (88%)
Strand = Plus / Plus
Query: 6 gagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgct 65
|||| ||||||| |||||||| |||||||| || ||| |||| |||||||||||||||||
Sbjct: 52 gagtcactttgcaatgaaggtgatggataaaacatctctggctagtcggaagaagctgct 111
Query: 66 tcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccct 125
|| || || |||||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 112 ccgggcgcaaaccgagcgggagatactgcagtccctggatcatccatttctgccaaccct 171
Query: 126 gtatactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagg 185
|||||||| |||||||| ||||||||||| || |||||||||| ||||||||||| ||
Sbjct: 172 atatactcattttgagacggacaagttttcgtgtctggttatggagttctgccctggcgg 231
Query: 186 ggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaa 245
||| | ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 232 ggacttgcacacccttcgacaaaggcagcctggaaaacatttttcagagcaagcagcaaa 291
Query: 246 gttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatata 305
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 292 gttctatgtagcagaggtgctccttgcattggagtacctgcatatgcttgggattatata 351
Query: 306 ccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctgtcgga 365
||||||||| || ||||| |||||||| || ||||| ||||| |||||||||||| | ||
Sbjct: 352 ccgtgatctcaagccagaaaatgtccttgtccgggaggatgggcacatcatgctgactga 411
Query: 366 cttcgatctatctcttcgctgttcagtgagcctaacggtgat 407
|| || || |||||||| ||||||||||||| ||| |||||
Sbjct: 412 ttttgacctctctcttcgttgttcagtgagcccaaccgtgat 453
>gb|BJ291570.1|BJ291570 BJ291570 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl23m10 5', mRNA sequence
Length = 522
Score = 349 bits (176), Expect = 1e-094
Identities = 260/288 (90%)
Strand = Plus / Plus
Query: 6 gagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgct 65
|||| ||||||| |||||||| |||||||| || ||| |||| |||||||||||||||||
Sbjct: 231 gagtcactttgcaatgaaggtgatggataaaacatctctggctagtcggaagaagctgct 290
Query: 66 tcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccct 125
|| || ||||||||||||||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 291 ccgggcacagaccgagcgggagatactgcagtccctggatcatccatttctgccgaccct 350
Query: 126 gtatactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagg 185
|||||||| |||||||| ||||||||||| || |||||||||| ||||||||||||||
Sbjct: 351 atatactcattttgagacggacaagttttcgtgtctggttatggagttctgccctggagg 410
Query: 186 ggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaa 245
||| | ||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 411 ggacttgcacactcttcgacaaaggcagcctggaaaacatttttcagagcaagcagcaaa 470
Query: 246 gttctatgtagctgaggtgctccttgcattggaatacctgcatatgct 293
|||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 471 gttctatgtagcagaggtgctccttgcattggagtacctgcatatgct 518
>gb|BU099966.1|BU099966 WHE3313_E10_I19ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3313_E10_I19,
mRNA sequence
Length = 726
Score = 347 bits (175), Expect = 4e-094
Identities = 292/331 (88%)
Strand = Plus / Plus
Query: 127 tatactcactttgagacagacaagttttcatgcttggttatggaattctgccctggaggg 186
|||||||| |||||||| ||||||||||| || |||||||||| ||||||||||| |||
Sbjct: 5 tatactcattttgagacggacaagttttcgtgtctggttatggagttctgccctggcggg 64
Query: 187 gatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaag 246
|| | ||||| ||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 65 gacttgcacacccttcgacaaaggcagcctggaaaacatttttcagagcaagcagcaaag 124
Query: 247 ttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatatac 306
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 125 ttctatgtagcagaggtgctccttgcattggagtacctgcatatgcttgggattatatac 184
Query: 307 cgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctgtcggac 366
|||||||| || ||||| |||||||| |||||||| ||||| |||||||||||| | ||
Sbjct: 185 cgtgatctcaagccagaaaatgtcctagttcgggaggatgggcacatcatgctgactgat 244
Query: 367 ttcgatctatctcttcgctgttcagtgagcctaacggtgatcaagtccgcaaatcctggc 426
|| || || |||||||| ||||||||||||| ||| ||||||| | ||||||||||||
Sbjct: 245 tttgacctctctcttcgttgttcagtgagcccaaccgtgatcaggggtgcaaatcctggc 304
Query: 427 ctagatgcaatgcagaggaacaatgcagcgt 457
|||| || |||||||||| ||||||||||
Sbjct: 305 ttagacgcgctgcagaggaataatgcagcgt 335
>gb|CK207508.1|CK207508 FGAS019132 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1149
Score = 343 bits (173), Expect = 6e-093
Identities = 266/297 (89%)
Strand = Plus / Plus
Query: 161 tggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctggaa 220
|||||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 26 tggttatggagttctgccctggaggggacttgcacactcttcgacaaaggcagcctggaa 85
Query: 221 aatatttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaat 280
|| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 86 aacatttttcagagcaagcagcaaagttctatgtagcagaggtgctccttgcattggagt 145
Query: 281 acctgcatatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcggg 340
||||||||||||| |||||||||||||||||||| || ||||| |||||||| |||||||
Sbjct: 146 acctgcatatgctcgggattatataccgtgatctcaagccagaaaatgtcctagttcggg 205
Query: 341 aagatggccacatcatgctgtcggacttcgatctatctcttcgctgttcagtgagcctaa 400
| ||||| |||||||||||| | || || || || |||||||| ||||||||||||| ||
Sbjct: 206 aggatgggcacatcatgctgactgattttgacctctctcttcgttgttcagtgagcccaa 265
Query: 401 cggtgatcaagtccgcaaatcctggcctagatgcaatgcagaggaacaatgcagcgt 457
| ||||||| | |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 266 ccgtgatcaggggtgcaaatcctggcttagatgcgctgcagaggaacaatgcagcgt 322
>gb|CK207510.1|CK207510 FGAS019134 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1128
Score = 343 bits (173), Expect = 6e-093
Identities = 266/297 (89%)
Strand = Plus / Plus
Query: 161 tggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctggaa 220
|||||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 19 tggttatggagttctgccctggaggggacttgcacactcttcgacaaaggcagcctggaa 78
Query: 221 aatatttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaat 280
|| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 79 aacatttttcagagcaagcagcaaagttctatgtagcagaggtgctccttgcattggagt 138
Query: 281 acctgcatatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcggg 340
||||||||||||| |||||||||||||||||||| || ||||| |||||||| |||||||
Sbjct: 139 acctgcatatgctcgggattatataccgtgatctcaagccagaaaatgtcctagttcggg 198
Query: 341 aagatggccacatcatgctgtcggacttcgatctatctcttcgctgttcagtgagcctaa 400
| ||||| |||||||||||| | || || || || |||||||| ||||||||||||| ||
Sbjct: 199 aggatgggcacatcatgctgactgattttgacctctctcttcgttgttcagtgagcccaa 258
Query: 401 cggtgatcaagtccgcaaatcctggcctagatgcaatgcagaggaacaatgcagcgt 457
| ||||||| | |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 259 ccgtgatcaggggtgcaaatcctggcttagatgcgctgcagaggaacaatgcagcgt 315
>gb|CA629836.1|CA629836 wle1n.pk0011.g6 wle1n Triticum aestivum cDNA clone wle1n.pk0011.g6
5' end, mRNA sequence
Length = 486
Score = 315 bits (159), Expect = 1e-084
Identities = 278/311 (89%), Gaps = 5/311 (1%)
Strand = Plus / Plus
Query: 6 gagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgct 65
|||| ||||||| |||||||| |||||||| || ||| |||| |||||||||||||||||
Sbjct: 13 gagtcactttgcaatgaaggtgatggataaaacatctctggctagtcggaagaagctgct 72
Query: 66 tcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccct 125
|| || ||||||||||||||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 73 ccgggcacagaccgagcgggagatactgcagtccctggatcatccatttctgccgaccct 132
Query: 126 gtatactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagg 185
|||||||| |||||||| ||||||||||| || |||||||||| ||||||||||||||
Sbjct: 133 atatactcattttgagacggacaagttttcgtgtctggttatggagttctgccctggagg 192
Query: 186 ggatcttcacactcttcgccaaaggcagcct-ggaaaatatttttc-agagcaagcagca 243
||| | ||||| ||||| |||||||||||| |||||| ||||||| |||||||||||||
Sbjct: 193 ggacttgcacacccttcgacaaaggcagcctgggaaaacatttttcaagagcaagcagca 252
Query: 244 aagttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattata 303
|| ||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 253 aa-ttctatgtagcagaggtgc-ccttgcattgg-atacctgcatatgcttgggattata 309
Query: 304 taccgtgatct 314
|||||||||||
Sbjct: 310 taccgtgatct 320
>gb|BE425679.1|BE425679 WHE0303_C11_C11ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0303_C11_C11, mRNA
sequence
Length = 460
Score = 224 bits (113), Expect = 4e-057
Identities = 198/225 (88%), Gaps = 1/225 (0%)
Strand = Plus / Plus
Query: 6 gagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgct 65
|||| ||||||| |||||||| |||||||| || ||| |||| |||||||||||||||||
Sbjct: 237 gagtcactttgcaatgaaggtgatggataaaacatctctggctagtcggaagaagctgct 296
Query: 66 tcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccct 125
|| || ||||||||||||||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 297 ccgggcacagaccgagcgggagatactgcagtccctggatcatccatttctgccgaccct 356
Query: 126 gtatactcactttgagacagacaagttttcatgcttggttatggaattctgccctggagg 185
|||||||| |||||||| ||||||||||| || |||||||||| ||||||||||||||
Sbjct: 357 atatactcattttgagacggacaagttttcgtgtctggttatggagttctgccctggagg 416
Query: 186 ggatcttcacactcttcgccaaaggcagcctggaaaatatttttc 230
||| | ||||||||||| | |||||||||||||||| |||||||
Sbjct: 417 ggacttgcacactcttcgac-aaggcagcctggaaaacatttttc 460
>gb|CK208981.1|CK208981 FGAS020710 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1140
Score = 206 bits (104), Expect = 1e-051
Identities = 128/136 (94%)
Strand = Plus / Plus
Query: 225 tttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaatacct 284
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 27 tttttcagagcaagcagcaaagttctatgtagcagaggtgctccttgcattggagtacct 86
Query: 285 gcatatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaaga 344
|||||||||||||||||||||||||||||| || ||||| |||||||| |||||||| ||
Sbjct: 87 gcatatgcttgggattatataccgtgatctcaagccagaaaatgtcctagttcgggagga 146
Query: 345 tggccacatcatgctg 360
||| ||||||||||||
Sbjct: 147 tgggcacatcatgctg 162
Score = 58.0 bits (29), Expect = 5e-007
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 385 tgttcagtgagcctaacggtgatcaagtccgcaaatcctggcctagatgcaatgcagagg 444
||||||||||||| ||| ||||||| | |||||||||||| |||| || ||||||||
Sbjct: 209 tgttcagtgagcccaaccgtgatcaggggtgcaaatcctggcttagacgcgctgcagagg 268
Query: 445 aacaatgcagcgt 457
|| ||||||||||
Sbjct: 269 aataatgcagcgt 281
>gb|AL820281.1|AL820281 AL820281 N:130 Triticum aestivum cDNA clone G11_N130_plate_48, mRNA
sequence
Length = 560
Score = 170 bits (86), Expect = 5e-041
Identities = 149/170 (87%)
Strand = Plus / Plus
Query: 6 gagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgct 65
|||| ||||||| |||||||| |||||||| || ||| |||| |||||||||||||||||
Sbjct: 391 gagtcactttgcaatgaaggtgatggataaaacatctctggctagtcggaagaagctgct 450
Query: 66 tcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccct 125
|| || ||||||||||||||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 451 ccgggcacagaccgagcgggagatactgcagtccctggatcatccatttctgccgaccct 510
Query: 126 gtatactcactttgagacagacaagttttcatgcttggttatggaattct 175
|||||||| |||||||| ||||||||||| || |||||||||| ||||
Sbjct: 511 atatactcattttgagacggacaagttttcgtgtctggttatggagttct 560
>gb|BJ302749.1|BJ302749 BJ302749 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd16j20 5', mRNA sequence
Length = 226
Score = 168 bits (85), Expect = 2e-040
Identities = 145/165 (87%)
Strand = Plus / Plus
Query: 6 gagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgct 65
|||| ||||||| |||||||| |||||||| || ||| |||| |||||||||||||||||
Sbjct: 58 gagtcactttgcaatgaaggtgatggataaaacatctctggctagtcggaagaagctgct 117
Query: 66 tcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccct 125
|| || || |||||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 118 ccgggcgcaaaccgagcgggagatactgcagtccctggatcatccatttctgccaaccct 177
Query: 126 gtatactcactttgagacagacaagttttcatgcttggttatgga 170
|||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 178 atatactcattttgagacggacaagttttcgtgtctggttatgga 222
>gb|CD924992.1|CD924992 G750.115H01F010709 G750 Triticum aestivum cDNA clone G750115H01,
mRNA sequence
Length = 637
Score = 153 bits (77), Expect = 1e-035
Identities = 149/173 (86%)
Strand = Plus / Plus
Query: 285 gcatatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaaga 344
|||||||||||||||||||||||||||||| || ||||| |||||||| |||||||| ||
Sbjct: 23 gcatatgcttgggattatataccgtgatctcaagccagaaaatgtcctagttcgggagga 82
Query: 345 tggccacatcatgctgtcggacttcgatctatctcttcgctgttcagtgagcctaacggt 404
||| |||||||||||| | || || || || |||||||| ||||||||||||| ||| ||
Sbjct: 83 tgggcacatcatgctgactgattttgacctctctcttcgttgttcagtgagcccaaccgt 142
Query: 405 gatcaagtccgcaaatcctggcctagatgcaatgcagaggaacaatgcagcgt 457
||||| | |||||||||||| |||| || |||||||||| ||||||||||
Sbjct: 143 gatcaggggtgcaaatcctggcttagacgcgctgcagaggaataatgcagcgt 195
>gb|BJ212260.1|BJ212260 BJ212260 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh35k10 5', mRNA sequence
Length = 495
Score = 109 bits (55), Expect = 2e-022
Identities = 250/315 (79%)
Strand = Plus / Plus
Query: 58 aagctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccatttcta 117
||||| ||| |||| ||||| || ||||||| |||||| | | |||||||| |||||
Sbjct: 181 aagcttcttagagcacagactgaaagggagatattgcagtgcttagaccatccttttctt 240
Query: 118 ccaaccctgtatactcactttgagacagacaagttttcatgcttggttatggaattctgc 177
|| || |||| || ||||||||||| || || || ||||||||||| ||||| || |||
Sbjct: 241 ccgactttgtacacccactttgagactgataaattctcatgcttggtgatggagttttgc 300
Query: 178 cctggaggggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagagcaa 237
|||||||| || ||||| || || | || | ||||||||| || ||||| | || |||
Sbjct: 301 cctggaggagaccttcataccctaaggcagaagcagcctgggaagtatttccccgaacaa 360
Query: 238 gcagcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatgcttggg 297
|| || ||||| |||||||| || ||||| ||||| | ||||||||||| ||||| ||
Sbjct: 361 gctgccaagttttatgtagcagaagtgcttcttgctctagaatacctgcacatgctcggt 420
Query: 298 attatataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatg 357
|| ||||| || || || || ||||||||||| || || | ||||||||||||||||||
Sbjct: 421 atcatatatcgggacctcaagccagagaatgttcttgtgagagaagatggccacatcatg 480
Query: 358 ctgtcggacttcgat 372
||||| || ||||||
Sbjct: 481 ctgtcagatttcgat 495
>gb|BQ238899.1|BQ238899 TaE05039H01R TaE05 Triticum aestivum cDNA clone TaE05039H01R, mRNA
sequence
Length = 738
Score = 109 bits (55), Expect = 2e-022
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 6 gagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgct 65
|||| ||||||| |||||||| |||||||| || ||| |||| |||||||||||||||||
Sbjct: 637 gagtcactttgcaatgaaggtgatggataaaacatctctggctagtcggaagaagctgct 696
Query: 66 tcgagctcagaccgagcgggagatcctgcagtccctgga 104
|| || ||||||||||||||||| ||||||||||||||
Sbjct: 697 ccgggcacagaccgagcgggagatactgcagtccctgga 735
>gb|CK170680.1|CK170680 FGAS045652 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 1130
Score = 103 bits (52), Expect = 1e-020
Identities = 223/280 (79%)
Strand = Plus / Plus
Query: 83 gggagatcctgcagtccctggaccatccatttctaccaaccctgtatactcactttgaga 142
||||||| |||||| | |||||||||| || || || || |||| || ||||||||||
Sbjct: 226 gggagatattgcagtgcttggaccatcctttccttccgactttgtacacccactttgaga 285
Query: 143 cagacaagttttcatgcttggttatggaattctgccctggaggggatcttcacactcttc 202
| || || || ||||||||||| ||||| || |||||||||||||| || || || ||
Sbjct: 286 ctgataaattctcatgcttggtgatggagttttgccctggaggggacctgcataccctaa 345
Query: 203 gccaaaggcagcctggaaaatatttttcagagcaagcagcaaagttctatgtagctgagg 262
| || | |||||||| || ||||| | || ||||| || ||||| |||||||| ||||
Sbjct: 346 ggcagaaacagcctgggaagtatttccccgaacaagctgccaagttttatgtagcagagg 405
Query: 263 tgctccttgcattggaatacctgcatatgcttgggattatataccgtgatcttaaaccag 322
|||| ||||| | ||||||||||| ||||| || || ||||| || || || || ||||
Sbjct: 406 tgcttcttgctctagaatacctgcacatgctcggtatcatatatcgggacctcaagccag 465
Query: 323 agaatgtcctcgttcgggaagatggccacatcatgctgtc 362
||||||| || || | |||||||||||||||||||||||
Sbjct: 466 agaatgttcttgtgagagaagatggccacatcatgctgtc 505
>gb|BQ167265.1|BQ167265 WHE0061_C03_F05ZK Cheyenne wheat endosperm cDNA library Triticum
aestivum cDNA clone WHE0061_C03_F05, mRNA sequence
Length = 493
Score = 95.6 bits (48), Expect = 3e-018
Identities = 207/260 (79%)
Strand = Plus / Plus
Query: 103 gaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgcttg 162
|||||||| ||||| || || |||| || ||||||||||| || || || |||||||||
Sbjct: 189 gaccatccttttcttccgactttgtacacccactttgagactgataaattctcatgcttg 248
Query: 163 gttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctggaaaa 222
|| ||||| || ||||||||||| || || || || || | || | ||||||||| ||
Sbjct: 249 gtgatggagttttgccctggaggagacctgcataccctaaggcagaagcagcctgggaag 308
Query: 223 tatttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaatac 282
||||| | || ||||| || || || |||||||| |||||||| ||||| | ||||||
Sbjct: 309 tatttccccgaacaagctgccaaattttatgtagcagaggtgcttcttgctctagaatac 368
Query: 283 ctgcatatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaa 342
||||| ||||| || || ||||| || || || || ||||||||||| || || | |||
Sbjct: 369 ctgcacatgctcggtatcatatatcgggacctcaagccagagaatgttcttgtgagagaa 428
Query: 343 gatggccacatcatgctgtc 362
||||||||||||||||||||
Sbjct: 429 gatggccacatcatgctgtc 448
>gb|CN012003.1|CN012003 WHE3891_D11_G21ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3891_D11_G21,
mRNA sequence
Length = 730
Score = 83.8 bits (42), Expect = 1e-014
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 376 tctcttcgctgttcagtgagcctaacggtgatcaagtccgcaaatcctggcctagatgca 435
|||||||| ||||||||||||| ||| ||||||| | |||||||||||| |||||||
Sbjct: 32 tctcttcgttgttcagtgagcccaaccgtgatcaggggtgcaaatcctggcttagatgcg 91
Query: 436 atgcagaggaacaatgcagcgt 457
|||||||||||||||||||||
Sbjct: 92 ctgcagaggaacaatgcagcgt 113
>gb|CD907358.1|CD907358 G468.106L06F010813 G468 Triticum aestivum cDNA clone G468106L06,
mRNA sequence
Length = 695
Score = 73.8 bits (37), Expect = 9e-012
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 250 tatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgt 309
||||| ||||| || ||||| |||||||| || ||||||||| | ||| ||||||| |||
Sbjct: 512 tatgtcgctgaagttctcctagcattggagtatctgcatatgttgggggttatatatcgt 571
Query: 310 gatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttc 369
||||| || || ||||| | || ||||| |||||||| ||||||||||| || |||||
Sbjct: 572 gatctgaagcctgagaacatacttgttcgtgaagatgggcacatcatgctctccgacttt 631
Query: 370 gatct 374
|||||
Sbjct: 632 gatct 636
>gb|CD922290.1|CD922290 G750.102C14F010528 G750 Triticum aestivum cDNA clone G750102C14,
mRNA sequence
Length = 562
Score = 73.8 bits (37), Expect = 9e-012
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 250 tatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgt 309
||||| ||||| || ||||| |||||||| || ||||||||| | ||| ||||||| |||
Sbjct: 161 tatgtcgctgaagttctcctagcattggagtatctgcatatgttgggggttatatatcgt 220
Query: 310 gatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttc 369
||||| || || ||||| | || ||||| |||||||| ||||||||||| || |||||
Sbjct: 221 gatctgaagcctgagaacatacttgttcgtgaagatgggcacatcatgctctccgacttt 280
Query: 370 gatct 374
|||||
Sbjct: 281 gatct 285
>gb|BQ246776.1|BQ246776 TaE15005F07R TaE15 Triticum aestivum cDNA clone TaE15005F07R, mRNA
sequence
Length = 730
Score = 71.9 bits (36), Expect = 4e-011
Identities = 204/260 (78%)
Strand = Plus / Plus
Query: 55 aagaagctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccattt 114
|||||| |||||||||| ||||| ||| ||| ||| | |||| |||||| ||||| |||
Sbjct: 452 aagaagttgcttcgagcccagactgagaaggaaatcttacagtgcctggatcatcctttt 511
Query: 115 ctaccaaccctgtatactcactttgagacagacaagttttcatgcttggttatggaattc 174
|| ||||| |||| || ||||| ||||| || ||||| |||||| | |||||||| |||
Sbjct: 512 cttccaacattgtacacacacttcgagactgataagttctcatgcctcgttatggagttc 571
Query: 175 tgccctggaggggatcttcacactcttcgccaaaggcagcctggaaaatatttttcagag 234
||||||| || || | || || ||||| || | |||| ||| || |||||| ||||
Sbjct: 572 tgccctgagggagacttgcatacacttcgacagaaacagcgtggcaagtattttccagaa 631
Query: 235 caagcagcaaagttctatgtagctgaggtgctccttgcattggaatacctgcatatgctt 294
||||| | || ||||||||||| || | |||||||| |||| ||| ||||||||||
Sbjct: 632 caagctgttaaattctatgtagcagaaatcctccttgctatggagtacttgcatatgcta 691
Query: 295 gggattatataccgtgatct 314
|| || ||||| ||||||||
Sbjct: 692 ggcatcatatatcgtgatct 711
>gb|BF483237.1|BF483237 WHE1787_E05_I09ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1787_E05_I09, mRNA sequence
Length = 495
Score = 69.9 bits (35), Expect = 1e-010
Identities = 98/119 (82%)
Strand = Plus / Plus
Query: 256 gctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgtgatctt 315
||||||| |||||| |||||||| || ||||||||| | ||| ||||||| || |||||
Sbjct: 171 gctgaggggctcctagcattggagtatctgcatatgttgggggttatatatcgcgatctg 230
Query: 316 aaaccagagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcgatct 374
|| || ||||| | || ||||| |||||||| ||||||||||| || ||||| |||||
Sbjct: 231 aagcctgagaacatacttgttcgtgaagatgggcacatcatgctctccgactttgatct 289
>gb|BI479008.1|BI479008 WHE2951_B02_C03ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2951_B02_C03, mRNA sequence
Length = 704
Score = 69.9 bits (35), Expect = 1e-010
Identities = 101/123 (82%)
Strand = Plus / Plus
Query: 250 tatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgt 309
|||||||| || ||||| ||||| | ||||||||||| ||||| || || ||||| ||
Sbjct: 426 tatgtagcagaagtgcttcttgctctagaatacctgcacatgctcggtatcatatatcgg 485
Query: 310 gatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttc 369
|| || || ||||||||||| || || | ||||||||||||||||||||||| || |||
Sbjct: 486 gacctcaagccagagaatgttcttgtgagagaagatggccacatcatgctgtcagatttc 545
Query: 370 gat 372
|||
Sbjct: 546 gat 548
>gb|CA502249.1|CA502249 WHE4044_G11_N22ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4044_G11_N22, mRNA sequence
Length = 690
Score = 67.9 bits (34), Expect = 6e-010
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 6 gagttactttgccatgaaggttatggataagacttctttggcaagtcggaagaagctgct 65
|||| ||||||| |||||||| |||||||| || ||| |||| |||||||||||||||||
Sbjct: 613 gagtcactttgcaatgaaggtgatggataaaacatctctggctagtcggaagaagctgct 672
Query: 66 tcgagctcagaccgagcg 83
|| || || ||||||||
Sbjct: 673 ccgggcgcaaaccgagcg 690
>gb|BJ271854.1|BJ271854 BJ271854 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh27n03 5', mRNA sequence
Length = 591
Score = 61.9 bits (31), Expect = 4e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 301 atataccgtgatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgct 359
||||||||||||||||| ||||||||| |||| || || || ||||| |||||||||||
Sbjct: 203 atataccgtgatcttaagccagagaatatcctggtccgcgatgatggtcacatcatgct 261
>gb|CK206477.1|CK206477 FGAS018072 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1123
Score = 60.0 bits (30), Expect = 1e-007
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 70 gctcagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgtat 129
||||| || ||| |||||||||||||| ||||| |||||||| |||||||| ||||||
Sbjct: 240 gctcaaactgagagggagatcctgcagcttctggatcatccattcctaccaactctgtat 299
Query: 130 actcactttgagac 143
|| || ||||||||
Sbjct: 300 acacattttgagac 313
>gb|BF473458.1|BF473458 WHE0924_F07_L14ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0924_F07_L14, mRNA sequence
Length = 595
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 340 gaagatggccacatcatgctgtc 362
|||||||||||||||||||||||
Sbjct: 58 gaagatggccacatcatgctgtc 80
>gb|CA632412.1|CA632412 wle1n.pk0053.b3 wle1n Triticum aestivum cDNA clone wle1n.pk0053.b3
5' end, mRNA sequence
Length = 581
Score = 44.1 bits (22), Expect = 0.008
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 343 gatggccacatcatgctgtcggacttcgat 372
|||||||||||||||||||| || ||||||
Sbjct: 1 gatggccacatcatgctgtcagatttcgat 30
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 77,447
Number of Sequences: 636343
Number of extensions: 77447
Number of successful extensions: 20725
Number of sequences better than 0.5: 29
Number of HSP's better than 0.5 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20680
Number of HSP's gapped (non-prelim): 39
length of query: 457
length of database: 367,240,239
effective HSP length: 19
effective length of query: 438
effective length of database: 355,149,722
effective search space: 155555578236
effective search space used: 155555578236
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)