BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCG38e04.yg.2.1
(690 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN010180.1|CN010180 WHE3867_F07_K13ZS Wheat Fusarium gra... 561 e-158
gb|BQ239591.1|BQ239591 TaE05029A09R TaE05 Triticum aestivum... 456 e-127
gb|CD934560.1|CD934560 OV.001G12F000920 OV Triticum aestivu... 422 e-116
gb|CA604015.1|CA604015 wr1.pk0033.a10 wr1 Triticum aestivum... 329 1e-088
gb|CD927659.1|CD927659 GR45.102M21F010315 GR45 Triticum aes... 309 1e-082
gb|BF484041.1|BF484041 WHE2305_E08_I15ZS Wheat pre-anthesis... 303 8e-081
gb|CN007988.1|CN007988 WHE2635_H07_P13ZE Wheat Fusarium gra... 224 6e-057
gb|DR733707.1|DR733707 FGAS079465 Triticum aestivum FGAS: L... 139 3e-031
gb|CK207448.1|CK207448 FGAS019071 Triticum aestivum FGAS: L... 113 2e-023
gb|BE415659.1|BE415659 MWL037.F12000424 ITEC MWL Wheat Root... 105 4e-021
dbj|AP008982.1| Triticum aestivum mitochondrial DNA, comple... 68 9e-010
ref|NC_007579.1| Triticum aestivum mitochondrion, complete ... 68 9e-010
gb|CK203891.1|CK203891 FGAS012426 Triticum aestivum FGAS: L... 62 5e-008
gb|CK204215.1|CK204215 FGAS012751 Triticum aestivum FGAS: L... 62 5e-008
gb|BQ246010.1|BQ246010 TaE15017C07R TaE15 Triticum aestivum... 50 2e-004
gb|AL820672.1|AL820672 AL820672 O:232 Triticum aestivum cDN... 50 2e-004
gb|CA502235.1|CA502235 WHE4044_F09_L18ZT Wheat meiotic anth... 50 2e-004
gb|DQ086485.1| Triticum aestivum putative 1,3-beta-glucan s... 50 2e-004
gb|CA484126.1|CA484126 WHE4301_E08_I15ZS Wheat meiotic anth... 44 0.013
gb|AJ603181.1|AJ603181 AJ603181 T06 Triticum aestivum cDNA ... 42 0.050
gb|AJ603185.1|AJ603185 AJ603185 T06 Triticum aestivum cDNA ... 42 0.050
gb|CK206996.1|CK206996 FGAS018609 Triticum aestivum FGAS: L... 40 0.20
>gb|CN010180.1|CN010180 WHE3867_F07_K13ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3867_F07_K13,
mRNA sequence
Length = 684
Score = 561 bits (283), Expect = e-158
Identities = 463/523 (88%)
Strand = Plus / Minus
Query: 22 cgcttcccagagcaacgaaggggctcctgctctttttcccaccatgactcccagcttttc 81
|||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||||
Sbjct: 533 cgcttcccagagtgacgaagaggcccctgctctttgtcccaccatgactcccagcttttc 474
Query: 82 tctggtgccacaccaatacctccacgattgctgatccacttgtgccaatcagtccagtca 141
||||| |||||||||||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 473 tctggcgccacaccaatacctccacggttactgatccacttgttccaatcagtccagtcg 414
Query: 142 tccacaatcttctgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaa 201
|||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 413 tccacaatcttctgccactcaaatccagaagggttgaaaaggaagggtgcaaagagccag 354
Query: 202 gtgcccaccatgaaccacatggatacggtgatgaagatgtaagttatagcccctctatat 261
||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||||| ||
Sbjct: 353 gtgcccaccataaaccacatggaaacagtgatgaagatgtaagtgatagctcctctgtac 294
Query: 262 gactgaccaaatatttcatacacaactagtagaatcatcagctcaaggcccttgacaaaa 321
| ||| || || ||||||||||| || || |||||||||||||||| ||||| || |||
Sbjct: 293 gtctgtccgaagatttcatacacgacaagcagaatcatcagctcaatacccttcacgaaa 234
Query: 322 tggctgcgggaataaagtcgatagttctcagcaaatttggcatggaacaccacaaaccca 381
|||||||| ||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 233 tggctgcgagaataaagtcggtagttctcggcgaatttggcatggaacaccacaaaccca 174
Query: 382 cgtccagtggctctgtattccgctcctccatggagtaacgtccttccgtagtagtgagtt 441
|||||||| ||||| ||||| |||||||| ||||||| |||||||| || |||||||||
Sbjct: 173 cgtccagtcgctctatattcagctcctccgtggagtagggtccttccataatagtgagtt 114
Query: 442 tttgttcccaacgagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaa 501
|| || || | || ||||||||||||||||| |||||||| || ||||| || | |||
Sbjct: 113 ttggtcccaagtgaaaatgtgaagaaaacagatgccaactggagttgcatgagcacaaag 54
Query: 502 tcactcaatgcagttctgaatcctctctccaaaccgatttcca 544
||||| ||||| |||||||||||||||||||| ||||||||||
Sbjct: 53 tcacttaatgctgttctgaatcctctctccaacccgatttcca 11
>gb|BQ239591.1|BQ239591 TaE05029A09R TaE05 Triticum aestivum cDNA clone TaE05029A09R, mRNA
sequence
Length = 603
Score = 456 bits (230), Expect = e-127
Identities = 338/374 (90%)
Strand = Plus / Minus
Query: 37 cgaaggggctcctgctctttttcccaccatgactcccagcttttctctggtgccacacca 96
||||| ||| |||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 386 cgaagaggcccctgctctttgtcccaccatgattcccagcttttctctggagccacacca 327
Query: 97 atacctccacgattgctgatccacttgtgccaatcagtccagtcatccacaatcttctgc 156
||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 326 atacctccacggttactgatccacttgttccaatcagtccagtcatccacaatcttctgc 267
Query: 157 cactcaaatccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatgaac 216
||||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 266 cactcgaatccagaagggttgaacaggaagggtgcaaagagccaggtgcccaccataaac 207
Query: 217 cacatggatacggtgatgaagatgtaagttatagcccctctatatgactgaccaaatatt 276
|||||||| || ||||||||||||||||| ||||| ||||| || | ||| |||||||||
Sbjct: 206 cacatggaaacagtgatgaagatgtaagtgatagctcctctgtacgtctgtccaaatatt 147
Query: 277 tcatacacaactagtagaatcatcagctcaaggcccttgacaaaatggctgcgggaataa 336
|||||||| || || |||||||||||||||| ||||| || ||||||||||| |||||
Sbjct: 146 tcatacacgacaagcagaatcatcagctcaatacccttcacgaaatggctgcgagaatag 87
Query: 337 agtcgatagttctcagcaaatttggcatggaacaccacaaacccacgtccagtggctctg 396
||||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 86 agtcggtagttctcggcgaatttggcatggaacaccacaaacccacgtccagtcgctcta 27
Query: 397 tattccgctcctcc 410
||||| ||||||||
Sbjct: 26 tattcagctcctcc 13
>gb|CD934560.1|CD934560 OV.001G12F000920 OV Triticum aestivum cDNA clone OV001G12, mRNA
sequence
Length = 571
Score = 422 bits (213), Expect = e-116
Identities = 327/365 (89%)
Strand = Plus / Minus
Query: 22 cgcttcccagagcaacgaaggggctcctgctctttttcccaccatgactcccagcttttc 81
|||||||||||| |||||| ||| |||||||||| ||||||||||| ||||||||||||
Sbjct: 365 cgcttcccagagtgacgaagaggcccctgctctttgtcccaccatgattcccagcttttc 306
Query: 82 tctggtgccacaccaatacctccacgattgctgatccacttgtgccaatcagtccagtca 141
||||| |||||||||||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 305 tctggcgccacaccaatacctccacggttactgatccacttgttccaatcagtccagtcg 246
Query: 142 tccacaatcttctgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaa 201
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 245 tccacaatcttctgccactcaaatccagaagggttgaacaggaagggtgcaaagagccag 186
Query: 202 gtgcccaccatgaaccacatggatacggtgatgaagatgtaagttatagcccctctatat 261
||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||||| ||
Sbjct: 185 gtgcccaccataaaccacatggaaacagtgatgaagatgtaagtgatagctcctctgtac 126
Query: 262 gactgaccaaatatttcatacacaactagtagaatcatcagctcaaggcccttgacaaaa 321
| ||| || || ||||||||||| || || ||||||||||| |||| ||||| || |||
Sbjct: 125 gtctgtccgaagatttcatacacgacaagcagaatcatcagttcaatacccttcacgaaa 66
Query: 322 tggctgcgggaataaagtcgatagttctcagcaaatttggcatggaacaccacaaaccca 381
|||||||| ||||| ||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 65 tggctgcgagaatagagtcggtagttctcggcgaatttggcatggaacaccacaaaccca 6
Query: 382 cgtcc 386
|||||
Sbjct: 5 cgtcc 1
>gb|CA604015.1|CA604015 wr1.pk0033.a10 wr1 Triticum aestivum cDNA clone wr1.pk0033.a10 5'
end, mRNA sequence
Length = 412
Score = 329 bits (166), Expect = 1e-088
Identities = 244/271 (90%)
Strand = Plus / Minus
Query: 37 cgaaggggctcctgctctttttcccaccatgactcccagcttttctctggtgccacacca 96
||||| ||| | |||||||| ||||||||||| |||||||||| | |||| |||||||||
Sbjct: 271 cgaagaggcccntgctctttgtcccaccatgattcccagctttncnctggagccacacca 212
Query: 97 atacctccacgattgctgatccacttgtgccaatcagtccagtcatccacaatcttctgc 156
||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 211 atacctccacggttactgatccacttgttccaatcagtccagtcatccacaatcttctgc 152
Query: 157 cactcaaatccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatgaac 216
||||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 151 cactcgaatccagaagggttgaacaggaagggtgcaaagagccaggtgcccaccataaac 92
Query: 217 cacatggatacggtgatgaagatgtaagttatagcccctctatatgactgaccaaatatt 276
|||||||| || ||||||||||||||||| ||||| ||||| || | ||| |||||||||
Sbjct: 91 cacatggaaacagtgatgaagatgtaagtgatagctcctctgtacgtctgtccaaatatt 32
Query: 277 tcatacacaactagtagaatcatcagctcaa 307
|||||||| || || ||||||||||||||||
Sbjct: 31 tcatacacgacaagcagaatcatcagctcaa 1
>gb|CD927659.1|CD927659 GR45.102M21F010315 GR45 Triticum aestivum cDNA clone GR45102M21,
mRNA sequence
Length = 706
Score = 309 bits (156), Expect = 1e-082
Identities = 216/236 (91%)
Strand = Plus / Minus
Query: 22 cgcttcccagagcaacgaaggggctcctgctctttttcccaccatgactcccagcttttc 81
|||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||||
Sbjct: 257 cgcttcccagagtgacgaagaggcccctgctctttgtcccaccatgactcccagcttttc 198
Query: 82 tctggtgccacaccaatacctccacgattgctgatccacttgtgccaatcagtccagtca 141
||||| |||||||||||||||||||| || ||||||||||||| |||||||||||| |||
Sbjct: 197 tctggcgccacaccaatacctccacggttactgatccacttgttccaatcagtccaatca 138
Query: 142 tccacaatcttctgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaa 201
|||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 137 tccacaatcttctgccactcgaatccagaagggttgaaaaggaagggtgcaaagagccag 78
Query: 202 gtgcccaccatgaaccacatggatacggtgatgaagatgtaagttatagcccctct 257
||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||
Sbjct: 77 gtgcccaccataaaccacatggaaacagtgatgaagatgtaagtgatagctcctct 22
>gb|BF484041.1|BF484041 WHE2305_E08_I15ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2305_E08_I15, mRNA sequence
Length = 354
Score = 303 bits (153), Expect = 8e-081
Identities = 303/354 (85%)
Strand = Plus / Minus
Query: 234 gaagatgtaagttatagcccctctatatgactgaccaaatatttcatacacaactagtag 293
|||||||||||| ||||| ||| | || | ||| || || || |||||||| || || ||
Sbjct: 354 gaagatgtaagtgatagctcctttgtacgtctgtccgaagatctcatacacgacaagcag 295
Query: 294 aatcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagc 353
|||||||||||||| ||||| || ||||||||||| ||||| ||||| |||||||| ||
Sbjct: 294 aatcatcagctcaatacccttcacgaaatggctgcgagaatagagtcggtagttctcggc 235
Query: 354 aaatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctccatg 413
||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||
Sbjct: 234 gaatttggcatggaacaccacaaacccacgtccagtcgctctatattcagctcctccgtg 175
Query: 414 gagtaacgtccttccgtagtagtgagtttttgttcccaacgagaatgtgaagaaaacaga 473
||||| ||||||||| || ||||||||||| || || | ||| || ||||||||||||||
Sbjct: 174 gagtagcgtccttccataatagtgagttttagtcccaagcgaaaacgtgaagaaaacaga 115
Query: 474 ggccaactgaagctgcatcagtataaaatcactcaatgcagttctgaatcctctctccaa 533
|||||||| || ||||| || | ||| ||||| ||||| ||||||||||||||||||||
Sbjct: 114 tgccaactggagttgcatgagcacaaagtcacttaatgccgttctgaatcctctctccaa 55
Query: 534 accgatttccatcatcatgggcagcgccatcaaaaatccangnngcacaaaaga 587
|||||| |||||||||||||||| ||||||||||||||| | | ||||||||
Sbjct: 54 accgatctccatcatcatgggcaatgccatcaaaaatccaagttgaacaaaaga 1
>gb|CN007988.1|CN007988 WHE2635_H07_P13ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2635_H07_P13,
mRNA sequence
Length = 514
Score = 224 bits (113), Expect = 6e-057
Identities = 320/390 (82%)
Strand = Plus / Minus
Query: 195 gagccaagtgcccaccatgaaccacatggatacggtgatgaagatgtaagttatagcccc 254
|||||| ||| | ||||| ||||||||||| | ||||||||||||||| | ||||| ||
Sbjct: 514 gagccaggtgacaaccataaaccacatggagaaggtgatgaagatgtacgcgatagctcc 455
Query: 255 tctatatgactgaccaaatatttcatacacaactagtagaatcatcagctcaaggccctt 314
|| ||||||||| || || || ||| |||| | || || ||||||||||| | ||||||
Sbjct: 454 tcgatatgactgcccgaagatctcaaacacgataagcaggatcatcagctcgatgccctt 395
Query: 315 gacaaaatggctgcgggaataaagtcgatagttctcagcaaatttggcatggaacaccac 374
||| |||||||| || || || || || |||||||| || |||||||| |||||||||||
Sbjct: 394 gacgaaatggctccgtgagtagaggcggtagttctcggcgaatttggcgtggaacaccac 335
Query: 375 aaacccacgtccagtggctctgtattccgctcctccatggagtaacgtccttccgtagta 434
|| |||||||||||||||||||| || |||||||| ||||| | |||| |||| |||||
Sbjct: 334 gaatccacgtccagtggctctgtactcggctcctccgtggagcagcgtctttccatagta 275
Query: 435 gtgagtttttgttcccaacgagaatgtgaagaaaacagaggccaactgaagctgcatcag 494
|||||| || ||||| | || ||||||||||| || || || |||||||||||||| ||
Sbjct: 274 gtgagtcttggttccgagggaaaatgtgaagaagacggacgctaactgaagctgcatgag 215
Query: 495 tataaaatcactcaatgcagttctgaatcctctctccaaaccgatttccatcatcatggg 554
| ||| || ||||| || || ||||| |||||||||| |||||| ||||||||||| ||
Sbjct: 214 cacaaagtcgctcaacgcggtcctgaaccctctctccagaccgatctccatcatcatagg 155
Query: 555 cagcgccatcaaaaatccangnngcacaaa 584
||||||||||| || ||| | |||||||
Sbjct: 154 gagcgccatcaagaagccaagctgcacaaa 125
>gb|DR733707.1|DR733707 FGAS079465 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 821
Score = 139 bits (70), Expect = 3e-031
Identities = 118/134 (88%)
Strand = Plus / Minus
Query: 109 ttgctgatccacttgtgccaatcagtccagtcatccacaatcttctgccactcaaatcca 168
|||||||||||||||| ||| || |||||||| ||||||||||||||||| | || |||
Sbjct: 560 ttgctgatccacttgttccagtcggtccagtcgtccacaatcttctgccattagaaccca 501
Query: 169 gaaggattgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatggatacg 228
||||| ||||||||||| || ||||||||||| ||| | ||||||||||||||||| | |
Sbjct: 500 gaaggcttgaacaggaacggcgcaaagagccaggtggcaaccatgaaccacatggagaag 441
Query: 229 gtgatgaagatgta 242
||||||||||||||
Sbjct: 440 gtgatgaagatgta 427
Score = 91.7 bits (46), Expect = 6e-017
Identities = 202/254 (79%)
Strand = Plus / Minus
Query: 295 atcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagca 354
|||||||| |||| |||||| || |||||| |||| || || || || ||||| | ||
Sbjct: 374 atcatcagatcaatgccctttacgaaatgggtgcgcgagtagaggcggtagttattggcg 315
Query: 355 aatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctccatgg 414
|| ||||| |||||||||| || || || || ||||| |||| || ||||||||||||
Sbjct: 314 aacttggcgtggaacaccaggaatccgcgcccggtggccttgtactcggctcctccatgg 255
Query: 415 agtaacgtccttccgtagtagtgagtttttgttcccaacgagaatgtgaagaaaacagag 474
|| | |||| ||| ||||||| |||| || ||||| | |||||||||||||| || ||
Sbjct: 254 agcagcgtctttcggtagtagcgagtcttggttccaagggagaatgtgaagaagacggac 195
Query: 475 gccaactgaagctgcatcagtataaaatcactcaatgcagttctgaatcctctctccaaa 534
|| |||||||||||||| || | ||| || |||||||| | ||||| |||||||||| |
Sbjct: 194 gctaactgaagctgcatgagcacaaagtcgctcaatgctatcctgaaccctctctccaga 135
Query: 535 ccgatttccatcat 548
| ||| ||||||||
Sbjct: 134 ctgatctccatcat 121
>gb|CK207448.1|CK207448 FGAS019071 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1129
Score = 113 bits (57), Expect = 2e-023
Identities = 150/181 (82%)
Strand = Plus / Minus
Query: 44 gctcctgctctttttcccaccatgactcccagcttttctctggtgccacaccaatacctc 103
||||||||||| | |||||||| || |||||||| || ||||| | ||||||||| || |
Sbjct: 247 gctcctgctctatctcccaccaggattcccagctcttttctggagacacaccaatcccac 188
Query: 104 cacgattgctgatccacttgtgccaatcagtccagtcatccacaatcttctgccactcaa 163
||||||||||||||||||||| |||||| | ||| || |||| ||| ||| ||||||||
Sbjct: 187 cacgattgctgatccacttgttccaatccgaccaatcgtccaaaattttcgcccactcaa 128
Query: 164 atccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatgg 223
| || || || ||||| || ||||||||||||||||| || ||| | |||||||||||
Sbjct: 127 accccgaggggttgaatagaaatggtgcaaagagccatgtcaacactaggaaccacatgg 68
Query: 224 a 224
|
Sbjct: 67 a 67
>gb|BE415659.1|BE415659 MWL037.F12000424 ITEC MWL Wheat Root Library Triticum aestivum cDNA
clone MWL037.F12, mRNA sequence
Length = 467
Score = 105 bits (53), Expect = 4e-021
Identities = 149/181 (82%)
Strand = Plus / Minus
Query: 44 gctcctgctctttttcccaccatgactcccagcttttctctggtgccacaccaatacctc 103
||||||||||| | |||||||| || |||||||| || ||||||| ||||||||| || |
Sbjct: 340 gctcctgctctatctcccaccaggattcccagctcttttctggtgacacaccaatcccac 281
Query: 104 cacgattgctgatccacttgtgccaatcagtccagtcatccacaatcttctgccactcaa 163
||||||||||||||||||| | ||| || | ||| || |||| ||| ||| ||||||||
Sbjct: 280 cacgattgctgatccacttattccagtccgaccaatcgtccaaaattttcgcccactcaa 221
Query: 164 atccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatgg 223
| || || || |||||||| || |||||||||||||| || ||| | |||||||||||
Sbjct: 220 accccgaggggttgaacagaaagggtgcaaagagccatgtcaacactaggaaccacatgg 161
Query: 224 a 224
|
Sbjct: 160 a 160
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome
Length = 452528
Score = 67.9 bits (34), Expect = 9e-010
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 135 ccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaatggtgcaaa 194
||||||||| || || ||||||||||||||||| || |||||||| |||||||| || ||
Sbjct: 164804 ccagtcatctactattttctgccactcaaatcctgatggattgaagaggaatggagcgaa 164745
Query: 195 gagccaagtg 204
|||||||||
Sbjct: 164744 tagccaagtg 164735
>ref|NC_007579.1| Triticum aestivum mitochondrion, complete genome
Length = 452528
Score = 67.9 bits (34), Expect = 9e-010
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 135 ccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaatggtgcaaa 194
||||||||| || || ||||||||||||||||| || |||||||| |||||||| || ||
Sbjct: 164804 ccagtcatctactattttctgccactcaaatcctgatggattgaagaggaatggagcgaa 164745
Query: 195 gagccaagtg 204
|||||||||
Sbjct: 164744 tagccaagtg 164735
>gb|CK203891.1|CK203891 FGAS012426 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 826
Score = 61.9 bits (31), Expect = 5e-008
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||| ||||||||||| || |||||||||||||||| | || |||||||| | ||
Sbjct: 385 ccaatctgtccagtcatcaaccgtcttctgccactcaaaacatgacggattgaagataaa 326
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacatgga 224
||||||||| ||||||| |||||| |||||| |||||
Sbjct: 325 tggtgcaaatagccaagatgccaccaggaaccatatgga 287
>gb|CK204215.1|CK204215 FGAS012751 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 831
Score = 61.9 bits (31), Expect = 5e-008
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 126 ccaatcagtccagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaa 185
|||||| ||||||||||| || |||||||||||||||| | || |||||||| | ||
Sbjct: 384 ccaatctgtccagtcatcaaccgtcttctgccactcaaaacatgacggattgaagataaa 325
Query: 186 tggtgcaaagagccaagtgcccaccatgaaccacatgga 224
||||||||| ||||||| |||||| |||||| |||||
Sbjct: 324 tggtgcaaatagccaagatgccaccaggaaccatatgga 286
>gb|BQ246010.1|BQ246010 TaE15017C07R TaE15 Triticum aestivum cDNA clone TaE15017C07R, mRNA
sequence
Length = 653
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 316 acaaaatggctgcgggaataaagtcgatagttctcagcaaa 356
||||||||||| ||||||||||| || || |||||||||||
Sbjct: 606 acaaaatggcttcgggaataaagacggtaattctcagcaaa 566
>gb|AL820672.1|AL820672 AL820672 O:232 Triticum aestivum cDNA clone E11_O232_plate_16, mRNA
sequence
Length = 592
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 316 acaaaatggctgcgggaataaagtcgatagttctcagcaaa 356
||||||||||| ||||||||||| || || |||||||||||
Sbjct: 165 acaaaatggcttcgggaataaagacggtaattctcagcaaa 125
Score = 42.1 bits (21), Expect = 0.050
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 154 tgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaag 202
||||| ||||||||||| || ||||||| | |||| ||||| |||||||
Sbjct: 328 tgccattcaaatccagacgggttgaacacgtatggagcaaaaagccaag 280
>gb|CA502235.1|CA502235 WHE4044_F09_L18ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4044_F09_L18, mRNA sequence
Length = 598
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 316 acaaaatggctgcgggaataaagtcgatagttctcagcaaa 356
||||||||||| ||||||||||| || || |||||||||||
Sbjct: 115 acaaaatggcttcgggaataaagacggtaattctcagcaaa 75
>gb|DQ086485.1| Triticum aestivum putative 1,3-beta-glucan synthase 8 (GSL8) mRNA,
partial cds
Length = 580
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 316 acaaaatggctgcgggaataaagtcgatagttctcagcaaa 356
||||||||||| ||||||||||| || || |||||||||||
Sbjct: 562 acaaaatggcttcgggaataaagacggtaattctcagcaaa 522
>gb|CA484126.1|CA484126 WHE4301_E08_I15ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4301_E08_I15, mRNA sequence
Length = 330
Score = 44.1 bits (22), Expect = 0.013
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 292 agaatcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctca 351
|||||||||||||||| || || ||||| |||||||| || || |||| ||| |||||
Sbjct: 201 agaatcatcagctcaatccctttaacaaagtggctgcgagagtagagtctataattctct 142
Query: 352 gcaaatttggcatg 365
||||| || |||||
Sbjct: 141 gcaaactttgcatg 128
>gb|AJ603181.1|AJ603181 AJ603181 T06 Triticum aestivum cDNA clone G04_T06_plate_5, mRNA
sequence
Length = 297
Score = 42.1 bits (21), Expect = 0.050
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggaggtaccg 21
|||||||||||||||||||||
Sbjct: 5 gcggccgcccgggaggtaccg 25
>gb|AJ603185.1|AJ603185 AJ603185 T06 Triticum aestivum cDNA clone G10_T06_plate_5, mRNA
sequence
Length = 286
Score = 42.1 bits (21), Expect = 0.050
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggaggtaccg 21
|||||||||||||||||||||
Sbjct: 5 gcggccgcccgggaggtaccg 25
>gb|CK206996.1|CK206996 FGAS018609 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1038
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 399 ttccgctcctccatggagta 418
||||||||||||||||||||
Sbjct: 277 ttccgctcctccatggagta 258
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 131,735
Number of Sequences: 636343
Number of extensions: 131735
Number of successful extensions: 47135
Number of sequences better than 0.5: 22
Number of HSP's better than 0.5 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47031
Number of HSP's gapped (non-prelim): 103
length of query: 690
length of database: 367,240,239
effective HSP length: 19
effective length of query: 671
effective length of database: 355,149,722
effective search space: 238305463462
effective search space used: 238305463462
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)