BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.065K11F020919.3.1
(383 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE607040.1|BE607040 WHE0915_H10_P19ZS Wheat 5-15 DAP spi... 111 4e-023
gb|BF293986.1|BF293986 WHE2162_E02_J04ZS Triticum turgidum ... 111 4e-023
gb|BJ251623.1|BJ251623 BJ251623 Y. Ogihara unpublished cDNA... 111 4e-023
gb|BJ266420.1|BJ266420 BJ266420 Y. Ogihara unpublished cDNA... 111 4e-023
gb|BJ297799.1|BJ297799 BJ297799 Y. Ogihara unpublished cDNA... 111 4e-023
gb|CA626296.1|CA626296 wl1n.pk0131.e5 wl1n Triticum aestivu... 111 4e-023
gb|CA626813.1|CA626813 wl1n.pk0149.e7 wl1n Triticum aestivu... 111 4e-023
gb|CV781682.1|CV781682 FGAS076094 Triticum aestivum FGAS: L... 111 4e-023
gb|DR741066.1|DR741066 FGAS000997 Triticum aestivum FGAS: L... 111 4e-023
gb|BI751559.1|BI751559 Ta01_19f10_R Ta01_AAFC_ECORC_Fusariu... 107 5e-022
gb|BJ258278.1|BJ258278 BJ258278 Y. Ogihara unpublished cDNA... 107 5e-022
gb|BJ259936.1|BJ259936 BJ259936 Y. Ogihara unpublished cDNA... 107 5e-022
gb|BJ265652.1|BJ265652 BJ265652 Y. Ogihara unpublished cDNA... 107 5e-022
gb|BJ266559.1|BJ266559 BJ266559 Y. Ogihara unpublished cDNA... 107 5e-022
gb|BJ266770.1|BJ266770 BJ266770 Y. Ogihara unpublished cDNA... 107 5e-022
gb|CA617000.1|CA617000 wl1n.pk0010.e6 wl1n Triticum aestivu... 107 5e-022
gb|CA618801.1|CA618801 wl1n.pk0044.a8 wl1n Triticum aestivu... 107 5e-022
gb|BQ789476.1|BQ789476 WHE4161_G12_N23ZS Wheat CS whole pla... 103 9e-021
gb|BI750925.1|BI750925 Ta01_03h01_R Ta01_AAFC_ECORC_Fusariu... 98 5e-019
gb|BJ245733.1|BJ245733 BJ245733 Y. Ogihara unpublished cDNA... 98 5e-019
gb|BQ619684.1|BQ619684 TaLr1174B03F TaLr1 Triticum aestivum... 92 3e-017
gb|CV764353.1|CV764353 FGAS058738 Triticum aestivum FGAS: L... 92 3e-017
gb|CV780254.1|CV780254 FGAS074663 Triticum aestivum FGAS: L... 92 3e-017
gb|BU100961.1|BU100961 WHE3359_H09_O17ZS Chinese Spring alu... 90 1e-016
gb|CA627751.1|CA627751 wdr1.pk0004.a2 wdr1 Triticum aestivu... 88 5e-016
gb|CA616573.1|CA616573 wl1n.pk0008.f9 wl1n Triticum aestivu... 84 8e-015
gb|CA621532.1|CA621532 wl1n.pk0074.a8 wl1n Triticum aestivu... 84 8e-015
gb|CA625943.1|CA625943 wl1n.pk0144.e3 wl1n Triticum aestivu... 84 8e-015
gb|CD903042.1|CD903042 G356.108O23R011024 G356 Triticum aes... 84 8e-015
gb|CK211284.1|CK211284 FGAS023119 Triticum aestivum FGAS: L... 82 3e-014
gb|CV763365.1|CV763365 FGAS057754 Triticum aestivum FGAS: L... 78 5e-013
gb|CV775099.1|CV775099 FGAS069500 Triticum aestivum FGAS: L... 78 5e-013
gb|CV776139.1|CV776139 FGAS070543 Triticum aestivum FGAS: L... 78 5e-013
gb|BJ261264.1|BJ261264 BJ261264 Y. Ogihara unpublished cDNA... 76 2e-012
gb|AY286095.1| Triticum aestivum cultivar Chinese Spring ch... 72 3e-011
gb|BJ307585.1|BJ307585 BJ307585 Y. Ogihara unpublished cDNA... 66 2e-009
gb|BJ320867.1|BJ320867 BJ320867 Y. Ogihara unpublished cDNA... 66 2e-009
gb|CA647440.1|CA647440 wre1n.pk0111.h4 wre1n Triticum aesti... 60 1e-007
gb|CK154365.1|CK154365 FGAS033066 Triticum aestivum FGAS: T... 60 1e-007
gb|CK154380.1|CK154380 FGAS033081 Triticum aestivum FGAS: T... 60 1e-007
gb|CK154879.1|CK154879 FGAS033596 Triticum aestivum FGAS: T... 60 1e-007
gb|CK154941.1|CK154941 FGAS033659 Triticum aestivum FGAS: T... 60 1e-007
gb|CK155175.1|CK155175 FGAS033896 Triticum aestivum FGAS: T... 60 1e-007
gb|DR731654.1|DR731654 FGAS077574 Triticum aestivum FGAS: T... 60 1e-007
gb|BJ323288.1|BJ323288 BJ323288 Y. Ogihara unpublished cDNA... 58 5e-007
gb|CK206741.1|CK206741 FGAS018347 Triticum aestivum FGAS: L... 58 5e-007
gb|BJ260731.1|BJ260731 BJ260731 Y. Ogihara unpublished cDNA... 42 0.027
gb|BQ171194.1|BQ171194 WHE2339_D05_H09ZT Wheat pre-anthesis... 40 0.11
gb|CD930386.1|CD930386 GR45.111C04R010612 GR45 Triticum aes... 40 0.11
gb|CV065091.1|CV065091 WNEL19b4 Wheat EST endosperm library... 38 0.42
>gb|BE607040.1|BE607040 WHE0915_H10_P19ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0915_H10_P19, mRNA sequence
Length = 621
Score = 111 bits (56), Expect = 4e-023
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 356 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 415
Query: 61 agcgtccccatcaccaccgg 80
||||||||||||||| ||||
Sbjct: 416 agcgtccccatcaccgccgg 435
>gb|BF293986.1|BF293986 WHE2162_E02_J04ZS Triticum turgidum L. var. durum (durum wheat)
whole plant cDNA library Triticum turgidum cDNA clone
WHE2162_E02_J04, mRNA sequence
Length = 478
Score = 111 bits (56), Expect = 4e-023
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 145 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 204
Query: 61 agcgtccccatcaccaccgg 80
||||||||||||||| ||||
Sbjct: 205 agcgtccccatcaccgccgg 224
>gb|BJ251623.1|BJ251623 BJ251623 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf1o20 3', mRNA sequence
Length = 712
Score = 111 bits (56), Expect = 4e-023
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 229 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 170
Query: 61 agcgtccccatcaccaccgg 80
||||||||||||||| ||||
Sbjct: 169 agcgtccccatcaccgccgg 150
>gb|BJ266420.1|BJ266420 BJ266420 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh26j10 3', mRNA sequence
Length = 617
Score = 111 bits (56), Expect = 4e-023
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 226 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 167
Query: 61 agcgtccccatcaccaccgg 80
||||||||||||||| ||||
Sbjct: 166 agcgtccccatcaccgccgg 147
>gb|BJ297799.1|BJ297799 BJ297799 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl22c13 3', mRNA sequence
Length = 589
Score = 111 bits (56), Expect = 4e-023
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 388 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 329
Query: 61 agcgtccccatcaccaccgg 80
||||||||||||||| ||||
Sbjct: 328 agcgtccccatcaccgccgg 309
>gb|CA626296.1|CA626296 wl1n.pk0131.e5 wl1n Triticum aestivum cDNA clone wl1n.pk0131.e5 5'
end, mRNA sequence
Length = 482
Score = 111 bits (56), Expect = 4e-023
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 73 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 132
Query: 61 agcgtccccatcaccaccgg 80
||||||||||||||| ||||
Sbjct: 133 agcgtccccatcaccgccgg 152
>gb|CA626813.1|CA626813 wl1n.pk0149.e7 wl1n Triticum aestivum cDNA clone wl1n.pk0149.e7 5'
end, mRNA sequence
Length = 481
Score = 111 bits (56), Expect = 4e-023
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 73 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 132
Query: 61 agcgtccccatcaccaccgg 80
||||||||||||||| ||||
Sbjct: 133 agcgtccccatcaccgccgg 152
>gb|CV781682.1|CV781682 FGAS076094 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 820
Score = 111 bits (56), Expect = 4e-023
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 337 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 396
Query: 61 agcgtccccatcaccaccgg 80
||||||||||||||| ||||
Sbjct: 397 agcgtccccatcaccgccgg 416
>gb|DR741066.1|DR741066 FGAS000997 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1153
Score = 111 bits (56), Expect = 4e-023
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 489 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 430
Query: 61 agcgtccccatcaccaccgg 80
||||||||||||||| ||||
Sbjct: 429 agcgtccccatcaccgccgg 410
>gb|BI751559.1|BI751559 Ta01_19f10_R
Ta01_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta01_19f10, mRNA
sequence
Length = 259
Score = 107 bits (54), Expect = 5e-022
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 165 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 106
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 105 agcgtccccatcac 92
>gb|BJ258278.1|BJ258278 BJ258278 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh6m12 5', mRNA sequence
Length = 630
Score = 107 bits (54), Expect = 5e-022
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 224 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 283
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 284 agcgtccccatcac 297
>gb|BJ259936.1|BJ259936 BJ259936 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh22n11 5', mRNA sequence
Length = 522
Score = 107 bits (54), Expect = 5e-022
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 124 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 183
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 184 agcgtccccatcac 197
>gb|BJ265652.1|BJ265652 BJ265652 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh22n11 3', mRNA sequence
Length = 497
Score = 107 bits (54), Expect = 5e-022
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 374 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 315
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 314 agcgtccccatcac 301
>gb|BJ266559.1|BJ266559 BJ266559 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh27e11 3', mRNA sequence
Length = 588
Score = 107 bits (54), Expect = 5e-022
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 350 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 291
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 290 agcgtccccatcac 277
>gb|BJ266770.1|BJ266770 BJ266770 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh6m12 3', mRNA sequence
Length = 564
Score = 107 bits (54), Expect = 5e-022
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 364 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 305
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 304 agcgtccccatcac 291
>gb|CA617000.1|CA617000 wl1n.pk0010.e6 wl1n Triticum aestivum cDNA clone wl1n.pk0010.e6 5'
end, mRNA sequence
Length = 525
Score = 107 bits (54), Expect = 5e-022
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 217 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 276
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 277 agcgtccccatcac 290
>gb|CA618801.1|CA618801 wl1n.pk0044.a8 wl1n Triticum aestivum cDNA clone wl1n.pk0044.a8 5'
end, mRNA sequence
Length = 661
Score = 107 bits (54), Expect = 5e-022
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 116 gactggggcgtcctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccac 175
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 176 agcgtccccatcac 189
>gb|BQ789476.1|BQ789476 WHE4161_G12_N23ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4161_G12_N23, mRNA sequence
Length = 813
Score = 103 bits (52), Expect = 9e-021
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| |||||||||| |||||| || ||||||||||| ||||||
Sbjct: 648 gactggggcgtcctcttcggcttcggcccgg-cctcacggtggagaccgtcgtcctccac 706
Query: 61 agcgtccccatcaccaccgg 80
||||||||||||||| ||||
Sbjct: 707 agcgtccccatcaccgccgg 726
>gb|BI750925.1|BI750925 Ta01_03h01_R
Ta01_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta01_03h01, mRNA
sequence
Length = 264
Score = 97.6 bits (49), Expect = 5e-019
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 4 tggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccacagc 63
||||||||||||||||| |||||||| ||||| || || ||||||||||| ||| |||||
Sbjct: 167 tggggcgtcctcttcggcttcggccccggcctaacggtggagaccgtcgtcctcaacagc 108
Query: 64 gtccccatcaccaccggag 82
|||||||||||| ||||||
Sbjct: 107 gtccccatcaccdccggag 89
>gb|BJ245733.1|BJ245733 BJ245733 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf1o20 5', mRNA sequence
Length = 697
Score = 97.6 bits (49), Expect = 5e-019
Identities = 74/81 (91%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgaga-ccgtcgtgctcca 59
|||||||||||||||||||| |||||||| |||||||| || |||| ||||||| |||||
Sbjct: 498 gactggggcgtcctcttcggcttcggccccggcctcacggtggagacccgtcgtcctcca 557
Query: 60 cagcgtccccatcaccaccgg 80
|||||||||||||||| ||||
Sbjct: 558 cagcgtccccatcaccgccgg 578
>gb|BQ619684.1|BQ619684 TaLr1174B03F TaLr1 Triticum aestivum cDNA clone TaLr1174B03F, mRNA
sequence
Length = 541
Score = 91.7 bits (46), Expect = 3e-017
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| |||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 232 gactggggcgttctcttcggcttcggccccggcctcaccgtggagacggtcgtcctccat 173
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 172 agcgtccccatcac 159
>gb|CV764353.1|CV764353 FGAS058738 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 823
Score = 91.7 bits (46), Expect = 3e-017
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| |||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 408 gactggggcgttctcttcggcttcggccccggcctcaccgtggagacggtcgtcctccat 467
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 468 agcgtccccatcac 481
>gb|CV780254.1|CV780254 FGAS074663 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 953
Score = 91.7 bits (46), Expect = 3e-017
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| |||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 465 gactggggcgttctcttcggcttcggccccggcctcaccgtggagacggtcgtcctccat 524
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 525 agcgtccccatcac 538
>gb|BU100961.1|BU100961 WHE3359_H09_O17ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3359_H09_O17,
mRNA sequence
Length = 588
Score = 89.7 bits (45), Expect = 1e-016
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||||||||||| || ||||| || |||||||| ||||||||||| ||||||
Sbjct: 365 gactggggcgtcctcttcggctttggccccggtctcaccgtggagaccgtcgtcctccac 306
Query: 61 agcgtccccatca 73
|||||| ||||||
Sbjct: 305 agcgtctccatca 293
>gb|CA627751.1|CA627751 wdr1.pk0004.a2 wdr1 Triticum aestivum cDNA clone wdr1.pk0004.a2 5'
end, mRNA sequence
Length = 502
Score = 87.7 bits (44), Expect = 5e-016
Identities = 73/80 (91%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||||||| ||||||| |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 416 gactggggcgtc-tcttcggcttcggccccggcctcacggtggagaccgtcgt-ctccac 473
Query: 61 agcgtccccatcaccaccgg 80
||||||||||||||| ||||
Sbjct: 474 agcgtccccatcaccgccgg 493
>gb|CA616573.1|CA616573 wl1n.pk0008.f9 wl1n Triticum aestivum cDNA clone wl1n.pk0008.f9 5'
end, mRNA sequence
Length = 441
Score = 83.8 bits (42), Expect = 8e-015
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| |||||||| || |||||||| ||||| ||||| |||||
Sbjct: 90 gactggggcgttctcttcggcttcggccccggtctcaccgtggagacggtcgtcctccat 149
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 150 agcgtccccatcac 163
>gb|CA621532.1|CA621532 wl1n.pk0074.a8 wl1n Triticum aestivum cDNA clone wl1n.pk0074.a8 5'
end, mRNA sequence
Length = 510
Score = 83.8 bits (42), Expect = 8e-015
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| |||||||| || |||||||| ||||| ||||| |||||
Sbjct: 160 gactggggcgttctcttcggcttcggccccggtctcaccgtggagacggtcgtcctccat 219
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 220 agcgtccccatcac 233
>gb|CA625943.1|CA625943 wl1n.pk0144.e3 wl1n Triticum aestivum cDNA clone wl1n.pk0144.e3 5'
end, mRNA sequence
Length = 472
Score = 83.8 bits (42), Expect = 8e-015
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| |||||||| || |||||||| ||||| ||||| |||||
Sbjct: 160 gactggggcgttctcttcggcttcggccccggtctcaccgtggagacggtcgtcctccat 219
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 220 agcgtccccatcac 233
>gb|CD903042.1|CD903042 G356.108O23R011024 G356 Triticum aestivum cDNA clone G356108O23,
mRNA sequence
Length = 713
Score = 83.8 bits (42), Expect = 8e-015
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| |||||||| || |||||||| ||||| ||||| |||||
Sbjct: 297 gactggggcgttctcttcggcttcggccccggtctcaccgtggagacggtcgtcctccat 238
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 237 agcgtccccatcac 224
>gb|CK211284.1|CK211284 FGAS023119 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1095
Score = 81.8 bits (41), Expect = 3e-014
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 2 actggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccaca 61
|||||||||| |||||||| |||||||| ||||||||||| ||||| ||||| ||||| |
Sbjct: 319 actggggcgttctcttcggcttcggccccggcctcaccgtggagacggtcgtcctccata 260
Query: 62 gcgtccccatcac 74
| |||||||||||
Sbjct: 259 gtgtccccatcac 247
>gb|CV763365.1|CV763365 FGAS057754 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 834
Score = 77.8 bits (39), Expect = 5e-013
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| ||||| ||||||||||| || |||||||||||||| || || ||||||
Sbjct: 482 gactggggcgtactctttggtttcggccccggtctcaccgtcgagactgtggtcctccac 541
Query: 61 agcgtcc 67
|||||||
Sbjct: 542 agcgtcc 548
>gb|CV775099.1|CV775099 FGAS069500 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 836
Score = 77.8 bits (39), Expect = 5e-013
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| ||||| ||||||||||| || |||||||||||||| || || ||||||
Sbjct: 483 gactggggcgtactctttggtttcggccccggtctcaccgtcgagactgtggtcctccac 542
Query: 61 agcgtcc 67
|||||||
Sbjct: 543 agcgtcc 549
>gb|CV776139.1|CV776139 FGAS070543 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 815
Score = 77.8 bits (39), Expect = 5e-013
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| ||||| ||||||||||| || |||||||||||||| || || ||||||
Sbjct: 425 gactggggcgtactctttggtttcggccccggtctcaccgtcgagactgtggtcctccac 484
Query: 61 agcgtcc 67
|||||||
Sbjct: 485 agcgtcc 491
>gb|BJ261264.1|BJ261264 BJ261264 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh2c18 3', mRNA sequence
Length = 596
Score = 75.8 bits (38), Expect = 2e-012
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| || ||||| ||||| ||||| ||||| ||||| |||||
Sbjct: 169 gactggggcgttctcttcggctttggccccggcctgaccgtggagacagtcgtcctccat 110
Query: 61 agcgtccccatcac 74
||||||||||||||
Sbjct: 109 agcgtccccatcac 96
>gb|AY286095.1| Triticum aestivum cultivar Chinese Spring chalcone synthase (CHS)
gene, complete cds
Length = 1279
Score = 71.9 bits (36), Expect = 3e-011
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 1199 gactggggcgttctcttcggcttcggtcctggcctcaccgtggagacggtcgtcctccat 1258
Query: 61 agcgtccc 68
||||||||
Sbjct: 1259 agcgtccc 1266
>gb|BJ307585.1|BJ307585 BJ307585 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd12b12 3', mRNA sequence
Length = 692
Score = 65.9 bits (33), Expect = 2e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgt 53
|||||||||||||||||||| || ||||| ||| ||||| |||||||||||||
Sbjct: 226 gactggggcgtcctcttcggatttggccccggcatcaccctcgagaccgtcgt 174
>gb|BJ320867.1|BJ320867 BJ320867 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf18b07 3', mRNA sequence
Length = 647
Score = 65.9 bits (33), Expect = 2e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgt 53
|||||||||||||||||||| || ||||| ||| ||||| |||||||||||||
Sbjct: 215 gactggggcgtcctcttcggatttggccccggcatcaccctcgagaccgtcgt 163
>gb|CA647440.1|CA647440 wre1n.pk0111.h4 wre1n Triticum aestivum cDNA clone
wre1n.pk0111.h4 5' end, mRNA sequence
Length = 379
Score = 60.0 bits (30), Expect = 1e-007
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 43 gagaccgtcgtgctccacagcgtccccatcaccaccgg 80
||||||||||| ||||||||||||||||||||| ||||
Sbjct: 9 gagaccgtcgtcctccacagcgtccccatcaccgccgg 46
>gb|CK154365.1|CK154365 FGAS033066 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 896
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgt 53
||||||||||||||||| || ||||| ||| ||||| |||||||||||||
Sbjct: 410 tggggcgtcctcttcggatttggccccggcatcaccctcgagaccgtcgt 361
>gb|CK154380.1|CK154380 FGAS033081 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 894
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgt 53
||||||||||||||||| || ||||| ||| ||||| |||||||||||||
Sbjct: 410 tggggcgtcctcttcggatttggccccggcatcaccctcgagaccgtcgt 361
>gb|CK154879.1|CK154879 FGAS033596 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 905
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgt 53
||||||||||||||||| || ||||| ||| ||||| |||||||||||||
Sbjct: 410 tggggcgtcctcttcggatttggccccggcatcaccctcgagaccgtcgt 361
>gb|CK154941.1|CK154941 FGAS033659 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 871
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgt 53
||||||||||||||||| || ||||| ||| ||||| |||||||||||||
Sbjct: 409 tggggcgtcctcttcggatttggccccggcatcaccctcgagaccgtcgt 360
>gb|CK155175.1|CK155175 FGAS033896 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 921
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgt 53
||||||||||||||||| || ||||| ||| ||||| |||||||||||||
Sbjct: 410 tggggcgtcctcttcggatttggccccggcatcaccctcgagaccgtcgt 361
>gb|DR731654.1|DR731654 FGAS077574 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 878
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 4 tggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgt 53
||||||||||||||||| || ||||| ||| ||||||||||||| |||||
Sbjct: 410 tggggcgtcctcttcggatttggccccggcatcaccgtcgagactgtcgt 361
>gb|BJ323288.1|BJ323288 BJ323288 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf29n17 3', mRNA sequence
Length = 605
Score = 58.0 bits (29), Expect = 5e-007
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 4 tggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccacagc 63
||||| ||||||||||| || ||||| |||||||| |||||||| |||| ||| |||||
Sbjct: 219 tggggtgtcctcttcggctttggccccggcctcactgtcgagacactcgtcctctacagc 160
Query: 64 gtccc 68
|||||
Sbjct: 159 gtccc 155
>gb|CK206741.1|CK206741 FGAS018347 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1000
Score = 58.0 bits (29), Expect = 5e-007
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgt 53
|||||||||||||||||||| || ||||| ||| ||||| |||||| ||||||
Sbjct: 614 gactggggcgtcctcttcggatttggccccggcatcaccctcgagaacgtcgt 666
>gb|BJ260731.1|BJ260731 BJ260731 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh26j10 5', mRNA sequence
Length = 415
Score = 42.1 bits (21), Expect = 0.027
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcg 25
|||||||||||||||||||| ||||
Sbjct: 391 gactggggcgtcctcttcggcttcg 415
>gb|BQ171194.1|BQ171194 WHE2339_D05_H09ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2339_D05_H09, mRNA sequence
Length = 618
Score = 40.1 bits (20), Expect = 0.11
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 ggcccgggcctcaccgtcgagacc 48
||||| ||||||||||||||||||
Sbjct: 254 ggcccaggcctcaccgtcgagacc 231
>gb|CD930386.1|CD930386 GR45.111C04R010612 GR45 Triticum aestivum cDNA clone GR45111C04,
mRNA sequence
Length = 490
Score = 40.1 bits (20), Expect = 0.11
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 ggcccgggcctcaccgtcgagacc 48
||||| ||||||||||||||||||
Sbjct: 219 ggcccaggcctcaccgtcgagacc 196
>gb|CV065091.1|CV065091 WNEL19b4 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL19b4 5' similar to Unknown Function, mRNA sequence
Length = 611
Score = 38.2 bits (19), Expect = 0.42
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 210 cccttaattaattttattatggg 232
|||||||||||||||||| ||||
Sbjct: 563 cccttaattaattttattttggg 541
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 75,953
Number of Sequences: 636343
Number of extensions: 75953
Number of successful extensions: 19702
Number of sequences better than 0.5: 50
Number of HSP's better than 0.5 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19648
Number of HSP's gapped (non-prelim): 50
length of query: 383
length of database: 367,240,239
effective HSP length: 19
effective length of query: 364
effective length of database: 355,149,722
effective search space: 129274498808
effective search space used: 129274498808
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)