BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.060L08F020610.3.1
(677 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF485207.1|BF485207 WHE1789_F08_L15ZS Wheat pre-anthesis... 147 1e-033
gb|BJ280727.1|BJ280727 BJ280727 Y. Ogihara unpublished cDNA... 147 1e-033
gb|CK161610.1|CK161610 FGAS014181 Triticum aestivum FGAS: L... 147 1e-033
gb|BF293833.1|BF293833 WHE2153_E08_J15ZS Triticum turgidum ... 145 5e-033
gb|CA655077.1|CA655077 wlm0.pk0009.d11 wlm0 Triticum aestiv... 121 7e-026
gb|CV772446.1|CV772446 FGAS066839 Triticum aestivum FGAS: L... 100 2e-019
gb|BF473497.1|BF473497 WHE0929_A12_A23ZS Wheat 5-15 DAP spi... 90 2e-016
gb|BG263791.1|BG263791 WHE2338_A11_A22ZS Wheat pre-anthesis... 90 2e-016
gb|BJ244366.1|BJ244366 BJ244366 Y. Ogihara unpublished cDNA... 90 2e-016
gb|BJ270298.1|BJ270298 BJ270298 Y. Ogihara unpublished cDNA... 90 2e-016
gb|BQ238862.1|BQ238862 TaE05040C08R TaE05 Triticum aestivum... 90 2e-016
gb|BQ239279.1|BQ239279 TaE05035A05R TaE05 Triticum aestivum... 90 2e-016
gb|BQ239613.1|BQ239613 TaE05028G08R TaE05 Triticum aestivum... 90 2e-016
gb|BQ240278.1|BQ240278 TaE05019G01R TaE05 Triticum aestivum... 90 2e-016
gb|BQ241039.1|BQ241039 TaE05009H02R TaE05 Triticum aestivum... 90 2e-016
gb|CD890807.1|CD890807 G118.115H22F010719 G118 Triticum aes... 90 2e-016
gb|BJ211530.1|BJ211530 BJ211530 Y. Ogihara unpublished cDNA... 88 9e-016
gb|CA722149.1|CA722149 wds1c.pk003.f13.f wds1c Triticum mon... 88 9e-016
gb|CA722273.1|CA722273 wds1c.pk003.j22.f wds1c Triticum mon... 88 9e-016
gb|CA722327.1|CA722327 wds1c.pk003.n24.f wds1c Triticum mon... 88 9e-016
gb|CA744441.1|CA744441 wri1s.pk007.n9 wri1s Triticum aestiv... 80 2e-013
gb|CA745199.1|CA745199 wri1s.pk003.l22 wri1s Triticum aesti... 80 2e-013
gb|BG909063.1|BG909063 TaLr1173F03R TaLr1 Triticum aestivum... 70 2e-010
gb|CV762405.1|CV762405 FGAS056794 Triticum aestivum FGAS: L... 70 2e-010
gb|CD873378.1|CD873378 AZO3.001A10F010509 AZO3 Triticum aes... 60 2e-007
gb|BU100901.1|BU100901 WHE3359_C02_E03ZS Chinese Spring alu... 44 0.012
>gb|BF485207.1|BF485207 WHE1789_F08_L15ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1789_F08_L15, mRNA sequence
Length = 390
Score = 147 bits (74), Expect = 1e-033
Identities = 190/229 (82%)
Strand = Plus / Plus
Query: 178 cctgataagatgtttggcatctttttcgaggagatcaaccatgctggagctggtgggttg 237
||||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 134 cctgagaatatgtttggcatctttttcgaggagattaaccatgctggggctggtgggttg 193
Query: 238 tgggcagagcttgtaagcaacagaggatttgaggctggtgggcctaatacaccttcgaat 297
||||| || ||||| | || | ||| ||||| |||||||| |||||||| ||||| ||
Sbjct: 194 tgggccgaacttgtnaataataaaggttttgaagctggtggtcctaatacgccttcaaac 253
Query: 298 attgatccgtggctgatcattggggatgaatcaagtatcattgttggaactgatcggaca 357
||||| || ||| |||| ||||| |||||||| | || ||||||| ||| || || ||
Sbjct: 254 attgacccatggttgataattggagatgaatcgaacattattgttgcaaccgaccgctca 313
Query: 358 tcatgttttgaacgtaacccagttgcacttcggatggaagttctttgtg 406
|| ||||||| | ||| ||| | ||||||||||||||||| |||||||
Sbjct: 314 tcctgttttgcaactaatccaatcgcacttcggatggaagtactttgtg 362
>gb|BJ280727.1|BJ280727 BJ280727 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr9n08 5', mRNA sequence
Length = 570
Score = 147 bits (74), Expect = 1e-033
Identities = 259/323 (80%)
Strand = Plus / Plus
Query: 178 cctgataagatgtttggcatctttttcgaggagatcaaccatgctggagctggtgggttg 237
||||| || |||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 148 cctgagaatatgtttggcatctttttcgaggagattaaccatgccggggctggtgggttg 207
Query: 238 tgggcagagcttgtaagcaacagaggatttgaggctggtgggcctaatacaccttcgaat 297
||||| || ||||||| || ||||| ||||| |||||||| |||||||| ||||| ||
Sbjct: 208 tgggccgaacttgtaaataatagaggttttgaagctggtggtcctaatactccttcaaac 267
Query: 298 attgatccgtggctgatcattggggatgaatcaagtatcattgttggaactgatcggaca 357
||||| || ||| |||| ||||| ||||||| | || ||||||| ||| || || ||
Sbjct: 268 attgacccatggttgataattggagatgaattgaacattattgttgcaaccgaccgctca 327
Query: 358 tcatgttttgaacgtaacccagttgcacttcggatggaagttctttgtggttctnnnnnn 417
|| ||||||| | ||| ||| | ||||||||||||||||| ||||||| |||
Sbjct: 328 tcctgttttgcaactaatccaatcgcacttcggatggaagtactttgtgaatctagtgga 387
Query: 418 nctaatgcctgtccatcgggaggtgttggggtctataatcctggctactggggcatgaac 477
| ||| ||| ||| | |||||||| || | ||||||||||||| ||||||||||||
Sbjct: 388 aatgatgtctgcccaccaggaggtgtcggtatttataatcctggcttctggggcatgaat 447
Query: 478 attgaaaaggggaaggtttataa 500
||||| | | ||||||||||||
Sbjct: 448 attgaggaagcgaaggtttataa 470
>gb|CK161610.1|CK161610 FGAS014181 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1083
Score = 147 bits (74), Expect = 1e-033
Identities = 259/323 (80%)
Strand = Plus / Plus
Query: 178 cctgataagatgtttggcatctttttcgaggagatcaaccatgctggagctggtgggttg 237
||||| || |||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 200 cctgagaatatgtttggcatctttttcgaggagattaaccatgccggggctggtgggttg 259
Query: 238 tgggcagagcttgtaagcaacagaggatttgaggctggtgggcctaatacaccttcgaat 297
||||| || ||||||| || ||||| ||||| |||||||| |||||||| ||||| ||
Sbjct: 260 tgggccgaacttgtaaataatagaggttttgaagctggtggtcctaatactccttcaaac 319
Query: 298 attgatccgtggctgatcattggggatgaatcaagtatcattgttggaactgatcggaca 357
||||| || ||| |||| ||||| ||||||| | || ||||||| ||| || || ||
Sbjct: 320 attgacccatggttgataattggagatgaattgaacattattgttgcaaccgaccgctca 379
Query: 358 tcatgttttgaacgtaacccagttgcacttcggatggaagttctttgtggttctnnnnnn 417
|| ||||||| | ||| ||| | ||||||||||||||||| ||||||| |||
Sbjct: 380 tcctgttttgcaactaatccaatcgcacttcggatggaagtactttgtgaatctagtgga 439
Query: 418 nctaatgcctgtccatcgggaggtgttggggtctataatcctggctactggggcatgaac 477
| ||| ||| ||| | |||||||| || | ||||||||||||| ||||||||||||
Sbjct: 440 aatgatgtctgcccaccaggaggtgtcggtatttataatcctggcttctggggcatgaat 499
Query: 478 attgaaaaggggaaggtttataa 500
||||| | | ||||||||||||
Sbjct: 500 attgaggaagcgaaggtttataa 522
>gb|BF293833.1|BF293833 WHE2153_E08_J15ZS Triticum turgidum L. var. durum (durum wheat)
whole plant cDNA library Triticum turgidum cDNA clone
WHE2153_E08_J15, mRNA sequence
Length = 498
Score = 145 bits (73), Expect = 5e-033
Identities = 190/229 (82%)
Strand = Plus / Plus
Query: 178 cctgataagatgtttggcatctttttcgaggagatcaaccatgctggagctggtgggttg 237
||||| || |||||||||||||||||||||||||| || ||||| || ||||||||||||
Sbjct: 74 cctgagaatatgtttggcatctttttcgaggagattaatcatgccggggctggtgggttg 133
Query: 238 tgggcagagcttgtaagcaacagaggatttgaggctggtgggcctaatacaccttcgaat 297
||||| || ||||||| || ||||| ||||| |||||||| |||||||| ||||| ||
Sbjct: 134 tgggccgaacttgtaaataatagaggttttgaagctggtggtcctaatactccttcaaac 193
Query: 298 attgatccgtggctgatcattggggatgaatcaagtatcattgttggaactgatcggaca 357
||||| || ||| |||| ||||| |||||||| | || ||||||| ||| || || ||
Sbjct: 194 attgacccatggttgataattggagatgaatcgaacattattgttgcaaccgaccgctca 253
Query: 358 tcatgttttgaacgtaacccagttgcacttcggatggaagttctttgtg 406
|| ||||||| | ||| ||| | ||||||||||||||||| |||||||
Sbjct: 254 tcctgttttgcaactaatccaatcgcacttcggatggaagtactttgtg 302
>gb|CA655077.1|CA655077 wlm0.pk0009.d11 wlm0 Triticum aestivum cDNA clone wlm0.pk0009.d11
5' end, mRNA sequence
Length = 618
Score = 121 bits (61), Expect = 7e-026
Identities = 128/151 (84%)
Strand = Plus / Plus
Query: 178 cctgataagatgtttggcatctttttcgaggagatcaaccatgctggagctggtgggttg 237
||||| || |||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 192 cctgagaatatgtttggcatctttttcgaggagattaaccatgccggggctggtgggttg 251
Query: 238 tgggcagagcttgtaagcaacagaggatttgaggctggtgggcctaatacaccttcgaat 297
||||| || ||||||| || | | | ||||| |||||||| |||||||| ||||| ||
Sbjct: 252 tgggccgaacttgtaaataatanangttttgaagctggtggtcctaatactccttcaaac 311
Query: 298 attgatccgtggctgatcattggggatgaat 328
||||| || ||| |||| ||||| |||||||
Sbjct: 312 attgacccatggttgataattggagatgaat 342
>gb|CV772446.1|CV772446 FGAS066839 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 849
Score = 99.6 bits (50), Expect = 2e-019
Identities = 155/190 (81%)
Strand = Plus / Plus
Query: 217 catgctggagctggtgggttgtgggcagagcttgtaagcaacagaggatttgaggctggt 276
||||| || ||||||||||||||||| || ||||||| || ||||| ||||| ||||||
Sbjct: 110 catgccggggctggtgggttgtgggccgaacttgtaaataatagaggttttgaagctggt 169
Query: 277 gggcctaatacaccttcgaatattgatccgtggctgatcattggggatgaatcaagtatc 336
|| |||||||| ||||| || ||||| || ||| |||| ||||| |||||||| | ||
Sbjct: 170 ggtcctaatactccttcaaacattgacccatggttgataattggagatgaatcgaacatt 229
Query: 337 attgttggaactgatcggacatcatgttttgaacgtaacccagttgcacttcggatggaa 396
||||||| ||| || || |||| ||||||| | ||| ||| | |||||||||||||||
Sbjct: 230 attgttgcaaccgaccgctcatcctgttttgcaactaatccaatcgcacttcggatggaa 289
Query: 397 gttctttgtg 406
|| |||||||
Sbjct: 290 gtactttgtg 299
>gb|BF473497.1|BF473497 WHE0929_A12_A23ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0929_A12_A23, mRNA sequence
Length = 444
Score = 89.7 bits (45), Expect = 2e-016
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 205 gaggagatcaaccatgctggagctggtgggttgtgggcagagcttgtaagcaacagagga 264
||||| |||||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 234 gaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagtaacagaggt 293
Query: 265 tttgaggctggtgggcctaatacaccttcgaatattgatcc 305
||||| ||||| |||||| | || ||||| ||||| |||||
Sbjct: 294 tttgaagctggagggccttacactccttcaaatatagatcc 334
>gb|BG263791.1|BG263791 WHE2338_A11_A22ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2338_A11_A22, mRNA sequence
Length = 411
Score = 89.7 bits (45), Expect = 2e-016
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 205 gaggagatcaaccatgctggagctggtgggttgtgggcagagcttgtaagcaacagagga 264
||||| |||||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 165 gaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagtaacagaggt 224
Query: 265 tttgaggctggtgggcctaatacaccttcgaatattgatcc 305
||||| ||||| |||||| | || ||||| ||||| |||||
Sbjct: 225 tttgaagctggagggccttacactccttcaaatatagatcc 265
>gb|BJ244366.1|BJ244366 BJ244366 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf9h01 5', mRNA sequence
Length = 683
Score = 89.7 bits (45), Expect = 2e-016
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 205 gaggagatcaaccatgctggagctggtgggttgtgggcagagcttgtaagcaacagagga 264
||||| |||||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 260 gaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagtaacagaggt 319
Query: 265 tttgaggctggtgggcctaatacaccttcgaatattgatcc 305
||||| ||||| |||||| | || ||||| ||||| |||||
Sbjct: 320 tttgaagctggagggccttacactccttcaaatatagatcc 360
Score = 40.1 bits (20), Expect = 0.19
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 465 ctggggcatgaacattgaaaaggggaag 492
||||||||||||||| ||| ||||||||
Sbjct: 505 ctggggcatgaacatcgaagaggggaag 532
>gb|BJ270298.1|BJ270298 BJ270298 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh6p07 5', mRNA sequence
Length = 577
Score = 89.7 bits (45), Expect = 2e-016
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 205 gaggagatcaaccatgctggagctggtgggttgtgggcagagcttgtaagcaacagagga 264
||||| |||||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 241 gaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagtaacagaggt 300
Query: 265 tttgaggctggtgggcctaatacaccttcgaatattgatcc 305
||||| ||||| |||||| | || ||||| ||||| |||||
Sbjct: 301 tttgaagctggagggccttacactccttcaaatatagatcc 341
>gb|BQ238862.1|BQ238862 TaE05040C08R TaE05 Triticum aestivum cDNA clone TaE05040C08R, mRNA
sequence
Length = 631
Score = 89.7 bits (45), Expect = 2e-016
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 205 gaggagatcaaccatgctggagctggtgggttgtgggcagagcttgtaagcaacagagga 264
||||| |||||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 194 gaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagtaacagaggt 253
Query: 265 tttgaggctggtgggcctaatacaccttcgaatattgatcc 305
||||| ||||| |||||| | || ||||| ||||| |||||
Sbjct: 254 tttgaagctggagggccttacactccttcaaatatagatcc 294
Score = 40.1 bits (20), Expect = 0.19
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 465 ctggggcatgaacattgaaaaggggaag 492
||||||||||||||| ||| ||||||||
Sbjct: 439 ctggggcatgaacatcgaagaggggaag 466
>gb|BQ239279.1|BQ239279 TaE05035A05R TaE05 Triticum aestivum cDNA clone TaE05035A05R, mRNA
sequence
Length = 633
Score = 89.7 bits (45), Expect = 2e-016
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 205 gaggagatcaaccatgctggagctggtgggttgtgggcagagcttgtaagcaacagagga 264
||||| |||||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 274 gaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagtaacagaggt 333
Query: 265 tttgaggctggtgggcctaatacaccttcgaatattgatcc 305
||||| ||||| |||||| | || ||||| ||||| |||||
Sbjct: 334 tttgaagctggagggccttacactccttcaaatatagatcc 374
Score = 40.1 bits (20), Expect = 0.19
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 465 ctggggcatgaacattgaaaaggggaag 492
||||||||||||||| ||| ||||||||
Sbjct: 519 ctggggcatgaacatcgaagaggggaag 546
>gb|BQ239613.1|BQ239613 TaE05028G08R TaE05 Triticum aestivum cDNA clone TaE05028G08R, mRNA
sequence
Length = 558
Score = 89.7 bits (45), Expect = 2e-016
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 205 gaggagatcaaccatgctggagctggtgggttgtgggcagagcttgtaagcaacagagga 264
||||| |||||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 275 gaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagtaacagaggt 334
Query: 265 tttgaggctggtgggcctaatacaccttcgaatattgatcc 305
||||| ||||| |||||| | || ||||| ||||| |||||
Sbjct: 335 tttgaagctggagggccttacactccttcaaatatagatcc 375
Score = 40.1 bits (20), Expect = 0.19
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 465 ctggggcatgaacattgaaaaggggaag 492
||||||||||||||| ||| ||||||||
Sbjct: 520 ctggggcatgaacatcgaagaggggaag 547
>gb|BQ240278.1|BQ240278 TaE05019G01R TaE05 Triticum aestivum cDNA clone TaE05019G01R, mRNA
sequence
Length = 651
Score = 89.7 bits (45), Expect = 2e-016
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 205 gaggagatcaaccatgctggagctggtgggttgtgggcagagcttgtaagcaacagagga 264
||||| |||||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 276 gaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagtaacagaggt 335
Query: 265 tttgaggctggtgggcctaatacaccttcgaatattgatcc 305
||||| ||||| |||||| | || ||||| ||||| |||||
Sbjct: 336 tttgaagctggagggccttacactccttcaaatatagatcc 376
Score = 40.1 bits (20), Expect = 0.19
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 465 ctggggcatgaacattgaaaaggggaag 492
||||||||||||||| ||| ||||||||
Sbjct: 521 ctggggcatgaacatcgaagaggggaag 548
>gb|BQ241039.1|BQ241039 TaE05009H02R TaE05 Triticum aestivum cDNA clone TaE05009H02R, mRNA
sequence
Length = 662
Score = 89.7 bits (45), Expect = 2e-016
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 205 gaggagatcaaccatgctggagctggtgggttgtgggcagagcttgtaagcaacagagga 264
||||| |||||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 271 gaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagtaacagaggt 330
Query: 265 tttgaggctggtgggcctaatacaccttcgaatattgatcc 305
||||| ||||| |||||| | || ||||| ||||| |||||
Sbjct: 331 tttgaagctggagggccttacactccttcaaatatagatcc 371
Score = 40.1 bits (20), Expect = 0.19
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 465 ctggggcatgaacattgaaaaggggaag 492
||||||||||||||| ||| ||||||||
Sbjct: 516 ctggggcatgaacatcgaagaggggaag 543
>gb|CD890807.1|CD890807 G118.115H22F010719 G118 Triticum aestivum cDNA clone G118115H22,
mRNA sequence
Length = 700
Score = 89.7 bits (45), Expect = 2e-016
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 205 gaggagatcaaccatgctggagctggtgggttgtgggcagagcttgtaagcaacagagga 264
||||| |||||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 258 gaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagtaacagaggt 317
Query: 265 tttgaggctggtgggcctaatacaccttcgaatattgatcc 305
||||| ||||| |||||| | || ||||| ||||| |||||
Sbjct: 318 tttgaagctggagggccttacactccttcaaatatagatcc 358
Score = 40.1 bits (20), Expect = 0.19
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 465 ctggggcatgaacattgaaaaggggaag 492
||||||||||||||| ||| ||||||||
Sbjct: 503 ctggggcatgaacatagaagaggggaag 530
>gb|BJ211530.1|BJ211530 BJ211530 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh31d04 5', mRNA sequence
Length = 351
Score = 87.7 bits (44), Expect = 9e-016
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 172 aagatccctgataagatgtttggcatctttttcgaggagatcaaccatgctggagctggt 231
||||||||||||| | ||||||| || ||||| ||||||||||||||||| |||||||||
Sbjct: 171 aagatccctgatacgttgtttggaatattttttgaggagatcaaccatgcaggagctggt 230
Query: 232 gggttgtgggcagagcttgtaagcaacagaggatttgaggctgg 275
|| | |||||||| ||||| || || ||||| ||||| |||||
Sbjct: 231 ggaatatgggcagaacttgttagtaatagaggttttgaagctgg 274
>gb|CA722149.1|CA722149 wds1c.pk003.f13.f wds1c Triticum monococcum cDNA clone
wds1c.pk003.f13.f 3' end, mRNA sequence
Length = 598
Score = 87.7 bits (44), Expect = 9e-016
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 172 aagatccctgataagatgtttggcatctttttcgaggagatcaaccatgctggagctggt 231
||||||||||||| | ||||||| || ||||| ||||||||||||||||| |||||||||
Sbjct: 198 aagatccctgatacgttgtttggaatattttttgaggagatcaaccatgcaggagctggt 257
Query: 232 gggttgtgggcagagcttgtaagcaacagaggatttgaggctgg 275
|| | |||||||| ||||| || || ||||| ||||| |||||
Sbjct: 258 ggaatatgggcagaacttgttagtaatagaggttttgaagctgg 301
>gb|CA722273.1|CA722273 wds1c.pk003.j22.f wds1c Triticum monococcum cDNA clone
wds1c.pk003.j22.f 3' end, mRNA sequence
Length = 544
Score = 87.7 bits (44), Expect = 9e-016
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 172 aagatccctgataagatgtttggcatctttttcgaggagatcaaccatgctggagctggt 231
||||||||||||| | ||||||| || ||||| ||||||||||||||||| |||||||||
Sbjct: 214 aagatccctgatacgttgtttggaatattttttgaggagatcaaccatgcaggagctggt 273
Query: 232 gggttgtgggcagagcttgtaagcaacagaggatttgaggctgg 275
|| | |||||||| ||||| || || ||||| ||||| |||||
Sbjct: 274 ggaatatgggcagaacttgttagtaatagaggttttgaagctgg 317
>gb|CA722327.1|CA722327 wds1c.pk003.n24.f wds1c Triticum monococcum cDNA clone
wds1c.pk003.n24.f 3' end, mRNA sequence
Length = 533
Score = 87.7 bits (44), Expect = 9e-016
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 172 aagatccctgataagatgtttggcatctttttcgaggagatcaaccatgctggagctggt 231
||||||||||||| | ||||||| || ||||| ||||||||||||||||| |||||||||
Sbjct: 215 aagatccctgatacgttgtttggaatattttttgaggagatcaaccatgcaggagctggt 274
Query: 232 gggttgtgggcagagcttgtaagcaacagaggatttgaggctgg 275
|| | |||||||| ||||| || || ||||| ||||| |||||
Sbjct: 275 ggaatatgggcagaacttgttagtaatagaggttttgaagctgg 318
>gb|CA744441.1|CA744441 wri1s.pk007.n9 wri1s Triticum aestivum cDNA clone wri1s.pk007.n9 5'
end, mRNA sequence
Length = 515
Score = 79.8 bits (40), Expect = 2e-013
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 188 tgtttggcatctttttcgaggagatcaaccatgctggagctggtgggttgtgggcagagc 247
||||||| || ||||| ||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 98 tgtttggaatattttttgaggagatcaaccatgcaggagctggtggaatatgggcagagc 157
Query: 248 ttgtaagcaacagaggatttgaggctgg 275
|||| || || ||||| ||||| |||||
Sbjct: 158 ttgttagtaatagaggttttgaagctgg 185
>gb|CA745199.1|CA745199 wri1s.pk003.l22 wri1s Triticum aestivum cDNA clone wri1s.pk003.l22
5' end, mRNA sequence
Length = 502
Score = 79.8 bits (40), Expect = 2e-013
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 188 tgtttggcatctttttcgaggagatcaaccatgctggagctggtgggttgtgggcagagc 247
||||||| || ||||| ||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 100 tgtttggaatattttttgaggagatcaaccatgcaggagctggtggaatatgggcagagc 159
Query: 248 ttgtaagcaacagaggatttgaggctgg 275
|||| || || ||||| ||||| |||||
Sbjct: 160 ttgttagtaatagaggttttgaagctgg 187
>gb|BG909063.1|BG909063 TaLr1173F03R TaLr1 Triticum aestivum cDNA clone TaLr1173F03 5',
mRNA sequence
Length = 619
Score = 69.9 bits (35), Expect = 2e-010
Identities = 77/91 (84%)
Strand = Plus / Plus
Query: 188 tgtttggcatctttttcgaggagatcaaccatgctggagctggtgggttgtgggcagagc 247
||||||| || ||||| ||||||||||||||||| ||||| ||||| | |||||||| |
Sbjct: 392 tgtttgggatgttttttgaggagatcaaccatgcaggagccggtggcatatgggcagaac 451
Query: 248 ttgtaagcaacagaggatttgaggctggtgg 278
|||| || || ||||| ||||| ||||||||
Sbjct: 452 ttgttagtaatagaggttttgaagctggtgg 482
>gb|CV762405.1|CV762405 FGAS056794 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 822
Score = 69.9 bits (35), Expect = 2e-010
Identities = 77/91 (84%)
Strand = Plus / Plus
Query: 188 tgtttggcatctttttcgaggagatcaaccatgctggagctggtgggttgtgggcagagc 247
||||||| || ||||| ||||||||||||||||| ||||| ||||| | |||||||| |
Sbjct: 338 tgtttgggatgttttttgaggagatcaaccatgcaggagccggtggcatatgggcagaac 397
Query: 248 ttgtaagcaacagaggatttgaggctggtgg 278
|||| || || ||||| ||||| ||||||||
Sbjct: 398 ttgttagtaatagaggttttgaagctggtgg 428
>gb|CD873378.1|CD873378 AZO3.001A10F010509 AZO3 Triticum aestivum cDNA clone AZO3001A10,
mRNA sequence
Length = 557
Score = 60.0 bits (30), Expect = 2e-007
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 188 tgtttggcatctttttcgaggagatcaaccatgctggagctggtgggttgtgggcagagc 247
||||||| || ||||| ||||||||||||||||| ||||| ||||| | |||||||| |
Sbjct: 268 tgtttgggatgttttttgaggagatcaaccatgcaggagccggtggcatatgggcagaac 327
Query: 248 ttgtaagcaacagaggatttga 269
|||| || || ||||| |||||
Sbjct: 328 ttgttagtaatagaggttttga 349
>gb|BU100901.1|BU100901 WHE3359_C02_E03ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3359_C02_E03,
mRNA sequence
Length = 743
Score = 44.1 bits (22), Expect = 0.012
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 451 tataatcctggctactggggcatgaacattgaaaaggggaaggtttataa 500
||||||||||| | |||||||||||| ||||| | | ||||||||||||
Sbjct: 85 tataatcctggtttctggggcatgaatattgaggaagcgaaggtttataa 134
Score = 42.1 bits (21), Expect = 0.049
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 382 gcacttcggatggaagttctttgtg 406
||||||||||||||||| |||||||
Sbjct: 16 gcacttcggatggaagtactttgtg 40
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 119,240
Number of Sequences: 636343
Number of extensions: 119240
Number of successful extensions: 33588
Number of sequences better than 0.5: 26
Number of HSP's better than 0.5 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33526
Number of HSP's gapped (non-prelim): 57
length of query: 677
length of database: 367,240,239
effective HSP length: 19
effective length of query: 658
effective length of database: 355,149,722
effective search space: 233688517076
effective search space used: 233688517076
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)