BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBJ4h04.xg.2.2
(494 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE500722.1|BE500722 WHE0991-0994_G03_G03ZS Wheat pre-ant... 159 2e-037
gb|BJ245498.1|BJ245498 BJ245498 Y. Ogihara unpublished cDNA... 149 2e-034
gb|BJ251381.1|BJ251381 BJ251381 Y. Ogihara unpublished cDNA... 149 2e-034
gb|BG263743.1|BG263743 WHE2348_E03_J06ZS Wheat pre-anthesis... 141 5e-032
gb|BJ243839.1|BJ243839 BJ243839 Y. Ogihara unpublished cDNA... 137 8e-031
gb|BJ247645.1|BJ247645 BJ247645 Y. Ogihara unpublished cDNA... 133 1e-029
gb|BJ258356.1|BJ258356 BJ258356 Y. Ogihara unpublished cDNA... 131 5e-029
gb|BJ248972.1|BJ248972 BJ248972 Y. Ogihara unpublished cDNA... 129 2e-028
gb|CA741431.1|CA741431 wia1c.pk002.f17 wia1c Triticum aesti... 129 2e-028
gb|BQ902219.1|BQ902219 Ta02_06b04_R Ta02_AAFC_ECORC_Fusariu... 115 3e-024
gb|BJ253745.1|BJ253745 BJ253745 Y. Ogihara unpublished cDNA... 113 1e-023
gb|BJ253477.1|BJ253477 BJ253477 Y. Ogihara unpublished cDNA... 105 3e-021
gb|BQ901426.1|BQ901426 Ta02_19d11_R Ta02_AAFC_ECORC_Fusariu... 96 3e-018
gb|BE500862.1|BE500862 WHE0991-0994_L10_L10ZS Wheat pre-ant... 92 4e-017
gb|CA593420.1|CA593420 wpa1c.pk003.j13 wpa1c Triticum aesti... 88 7e-016
gb|BJ247418.1|BJ247418 BJ247418 Y. Ogihara unpublished cDNA... 86 3e-015
gb|BI750799.1|BI750799 Ta01_02d02_R Ta01_AAFC_ECORC_Fusariu... 80 2e-013
gb|CD454196.1|CD454196 WHE0991-0994_L10_L10ZT CS wheat pre-... 72 4e-011
gb|BJ263949.1|BJ263949 BJ263949 Y. Ogihara unpublished cDNA... 66 2e-009
gb|BJ285828.1|BJ285828 BJ285828 Y. Ogihara unpublished cDNA... 66 2e-009
gb|BJ255222.1|BJ255222 BJ255222 Y. Ogihara unpublished cDNA... 60 2e-007
gb|BE499235.1|BE499235 WHE0972_G04_M08ZS Wheat pre-anthesis... 52 4e-005
gb|BF482309.1|BF482309 WHE1797_B12_D23ZS Wheat pre-anthesis... 52 4e-005
gb|BF482590.1|BF482590 WHE2301-2304_G20_G20ZS Wheat pre-ant... 52 4e-005
gb|BJ243425.1|BJ243425 BJ243425 Y. Ogihara unpublished cDNA... 52 4e-005
gb|BQ904979.1|BQ904979 Ta04_13i05_R Ta04_AAFC_ECORC_Fusariu... 52 4e-005
gb|CA594449.1|CA594449 wpa1c.pk007.k12 wpa1c Triticum aesti... 52 4e-005
gb|CA595523.1|CA595523 wpa1c.pk010.g10 wpa1c Triticum aesti... 52 4e-005
gb|CN013186.1|CN013186 WHE3957_G05_N09ZS Wheat Fusarium gra... 52 4e-005
gb|BE445279.1|BE445279 WHE1134_G11_M22ZS Wheat etiolated se... 48 6e-004
gb|BE500351.1|BE500351 WHE0982_G05_N10ZS Wheat pre-anthesis... 48 6e-004
gb|BE586057.1|BE586057 Est#8pT7_C08_c8_054 KSU wheat Fusari... 48 6e-004
gb|BE590942.1|BE590942 WHE0870_B08_D16ZS Wheat 20-45 DAP sp... 48 6e-004
gb|BE637921.1|BE637921 WHE1755-1758_P08_P08ZS Wheat pre-ant... 48 6e-004
gb|BI750619.1|BI750619 Ta01_10e01_R Ta01_AAFC_ECORC_Fusariu... 48 6e-004
gb|BM138271.1|BM138271 WHE0493_E08_J15ZS Wheat Fusarium gra... 48 6e-004
gb|BJ210800.1|BJ210800 BJ210800 Y. Ogihara unpublished cDNA... 48 6e-004
gb|BJ211265.1|BJ211265 BJ211265 Y. Ogihara unpublished cDNA... 48 6e-004
gb|BJ224248.1|BJ224248 BJ224248 Y. Ogihara unpublished cDNA... 48 6e-004
gb|BJ218078.1|BJ218078 BJ218078 Y. Ogihara unpublished cDNA... 48 6e-004
gb|BJ218644.1|BJ218644 BJ218644 Y. Ogihara unpublished cDNA... 48 6e-004
gb|BJ228779.1|BJ228779 BJ228779 Y. Ogihara unpublished cDNA... 48 6e-004
gb|BJ300952.1|BJ300952 BJ300952 Y. Ogihara unpublished cDNA... 48 6e-004
gb|BJ306766.1|BJ306766 BJ306766 Y. Ogihara unpublished cDNA... 48 6e-004
gb|AL816686.1|AL816686 AL816686 l:226 Triticum aestivum cDN... 48 6e-004
gb|AL825122.1|AL825122 AL825122 p:234 Triticum aestivum cDN... 48 6e-004
gb|AL826109.1|AL826109 AL826109 p:436 Triticum aestivum cDN... 48 6e-004
gb|AL826929.1|AL826929 AL826929 p:638 Triticum aestivum cDN... 48 6e-004
gb|AL828058.1|AL828058 AL828058 p:739 Triticum aestivum cDN... 48 6e-004
gb|AL829505.1|AL829505 AL829505 p:840 Triticum aestivum cDN... 48 6e-004
gb|AL829515.1|AL829515 AL829515 p:840 Triticum aestivum cDN... 48 6e-004
gb|BQ838335.1|BQ838335 WHE2909_C08_E15ZS Wheat aluminum-str... 48 6e-004
gb|BQ904983.1|BQ904983 Ta04_13i23_R Ta04_AAFC_ECORC_Fusariu... 48 6e-004
gb|CA612734.1|CA612734 wr1.pk0129.f9 wr1 Triticum aestivum ... 48 6e-004
gb|CA615477.1|CA615477 wr1.pk172.f7 wr1 Triticum aestivum c... 48 6e-004
gb|CA624550.1|CA624550 wl1n.pk0120.d3 wl1n Triticum aestivu... 48 6e-004
gb|CA641312.1|CA641312 wre1n.pk0043.f7 wre1n Triticum aesti... 48 6e-004
gb|CA700883.1|CA700883 wkm1c.pk006.k22 wkm1c Triticum aesti... 48 6e-004
gb|CA703297.1|CA703297 wdk1c.pk009.l10 wdk1c Triticum aesti... 48 6e-004
gb|CD490935.1|CD490935 WHE3008_G10_N20ZT Wheat etiolated se... 48 6e-004
gb|CD868992.1|CD868992 AZO2.110G04R010329 AZO2 Triticum aes... 48 6e-004
gb|CD877904.1|CD877904 AZO4.101G19F011002 AZO4 Triticum aes... 48 6e-004
gb|CD897368.1|CD897368 G174.105K12F010823 G174 Triticum aes... 48 6e-004
gb|CD909528.1|CD909528 G468.112N21F010820 G468 Triticum aes... 48 6e-004
gb|CD926655.1|CD926655 GR45.001L02F001020 GR45 Triticum aes... 48 6e-004
gb|CD938294.1|CD938294 OV.109K08F010309 OV Triticum aestivu... 48 6e-004
gb|CK196125.1|CK196125 FGAS004572 Triticum aestivum FGAS: L... 48 6e-004
gb|CK202043.1|CK202043 FGAS010564 Triticum aestivum FGAS: L... 48 6e-004
gb|CK210408.1|CK210408 FGAS022215 Triticum aestivum FGAS: L... 48 6e-004
gb|CK217046.1|CK217046 FGAS029047 Triticum aestivum FGAS: L... 48 6e-004
gb|CV762302.1|CV762302 FGAS056691 Triticum aestivum FGAS: L... 48 6e-004
gb|CV770355.1|CV770355 FGAS064748 Triticum aestivum FGAS: L... 48 6e-004
gb|CV772197.1|CV772197 FGAS066590 Triticum aestivum FGAS: L... 48 6e-004
gb|CV776529.1|CV776529 FGAS070933 Triticum aestivum FGAS: L... 48 6e-004
gb|CV777948.1|CV777948 FGAS072356 Triticum aestivum FGAS: L... 48 6e-004
gb|CV777980.1|CV777980 FGAS072388 Triticum aestivum FGAS: L... 48 6e-004
gb|DR732379.1|DR732379 FGAS078299 Triticum aestivum FGAS: T... 48 6e-004
gb|DR732405.1|DR732405 FGAS078325 Triticum aestivum FGAS: T... 48 6e-004
gb|DR732678.1|DR732678 FGAS078598 Triticum aestivum FGAS: T... 48 6e-004
gb|DR740452.1|DR740452 FGAS000399 Triticum aestivum FGAS: L... 48 6e-004
gb|CD935767.1|CD935767 OV.102G06R010427 OV Triticum aestivu... 42 0.035
gb|CK155533.1|CK155533 FGAS036354 Triticum aestivum FGAS: T... 40 0.14
gb|DR732588.1|DR732588 FGAS078508 Triticum aestivum FGAS: T... 40 0.14
>gb|BE500722.1|BE500722 WHE0991-0994_G03_G03ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE0991-0994_G03_G03, mRNA
sequence
Length = 495
Score = 159 bits (80), Expect = 2e-037
Identities = 189/236 (80%)
Strand = Plus / Plus
Query: 70 catgtctttcaccggcncgcaggacaagtgcacnnnntgcgacaagaccnnccacttcat 129
|||||||||||||||| |||||||||||||| | ||||| ||||| ||| |||||
Sbjct: 69 catgtctttcaccggcacgcaggacaagtgctcggcgtgcgaaaagacggtccatttcat 128
Query: 130 cgacctcctcacnnnnnacnnnnccatctaccataagacatgcntcaannncngccactg 189
|||||||||||| || ||||||||| ||||| ||| |||| | |||||||
Sbjct: 129 cgacctcctcacggcggacggcgtcatctaccacaagacctgcttcaaatgcagccactg 188
Query: 190 caaagggnnncnctcgatgtgcagctactcctccatggacgnnnnnctgtactgcaagac 249
||||||| | ||||||||||||||| || |||||||||| || |||||||||||
Sbjct: 189 caaagggatcctctcgatgtgcagctattcttccatggacggcgtcctctactgcaagac 248
Query: 250 ccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttcacgccag 305
||||||||||||||||||||| ||| ||||||||||| ||||| ||||| ||||
Sbjct: 249 gcacttcgagcagctcttcaaggagacagggagcttctcaaagaagttcacaccag 304
Score = 42.1 bits (21), Expect = 0.035
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 330 aactgacaagggccccaagcaagct 354
||||| |||||||||||||||||||
Sbjct: 329 aactgtcaagggccccaagcaagct 353
>gb|BJ245498.1|BJ245498 BJ245498 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19o10 5', mRNA sequence
Length = 622
Score = 149 bits (75), Expect = 2e-034
Identities = 184/231 (79%)
Strand = Plus / Plus
Query: 70 catgtctttcaccggcncgcaggacaagtgcacnnnntgcgacaagaccnnccacttcat 129
|||||||||||||||| |||||||||||||| ||||| ||||| ||| |||||
Sbjct: 66 catgtctttcaccggcacgcaggacaagtgctttgcgtgcgaaaagacggtccatttcat 125
Query: 130 cgacctcctcacnnnnnacnnnnccatctaccataagacatgcntcaannncngccactg 189
|||||||||||| || ||||||||| ||||| ||| |||| | |||||||
Sbjct: 126 cgacctcctcacggcggacggcgtcatctaccacaagacctgcttcaaatgcagccactg 185
Query: 190 caaagggnnncnctcgatgtgcagctactcctccatggacgnnnnnctgtactgcaagac 249
||||||| | ||||||||||||||| || |||||||||| || |||||||||||
Sbjct: 186 caaagggatcctctcgatgtgcagctattcttccatggacggtgtcctctactgcaagac 245
Query: 250 ccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttcac 300
||||||||||||||||||||| ||| ||||||||||| ||||| |||||
Sbjct: 246 gcacttcgagcagctcttcaaggagacagggagcttctcaaagaagttcac 296
>gb|BJ251381.1|BJ251381 BJ251381 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19o10 3', mRNA sequence
Length = 656
Score = 149 bits (75), Expect = 2e-034
Identities = 184/231 (79%)
Strand = Plus / Minus
Query: 70 catgtctttcaccggcncgcaggacaagtgcacnnnntgcgacaagaccnnccacttcat 129
|||||||||||||||| |||||||||||||| ||||| ||||| ||| |||||
Sbjct: 591 catgtctttcaccggcacgcaggacaagtgctttgcgtgcgaaaagacggtccatttcat 532
Query: 130 cgacctcctcacnnnnnacnnnnccatctaccataagacatgcntcaannncngccactg 189
|||||||||||| || ||||||||| ||||| ||| |||| | |||||||
Sbjct: 531 cgacctcctcacggcggacggcgtcatctaccacaagacctgcttcaaatgcagccactg 472
Query: 190 caaagggnnncnctcgatgtgcagctactcctccatggacgnnnnnctgtactgcaagac 249
||||||| | ||||||||||||||| || |||||||||| || |||||||||||
Sbjct: 471 caaagggatcctctcgatgtgcagctattcttccatggacggtgtcctctactgcaagac 412
Query: 250 ccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttcac 300
||||||||||||||||||||| ||| ||||||||||| ||||| |||||
Sbjct: 411 gcacttcgagcagctcttcaaggagacagggagcttctcaaagaagttcac 361
>gb|BG263743.1|BG263743 WHE2348_E03_J06ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2348_E03_J06, mRNA sequence
Length = 542
Score = 141 bits (71), Expect = 5e-032
Identities = 183/231 (79%)
Strand = Plus / Plus
Query: 70 catgtctttcaccggcncgcaggacaagtgcacnnnntgcgacaagaccnnccacttcat 129
|||||||||||||||| |||||||||||||| ||||| ||||| ||| |||||
Sbjct: 70 catgtctttcaccggcacgcaggacaagtgctttgcgtgcgaaaagacggtccatttcat 129
Query: 130 cgacctcctcacnnnnnacnnnnccatctaccataagacatgcntcaannncngccactg 189
|||||||||||| || ||||||||| ||||| ||| |||| | |||||||
Sbjct: 130 cgacctcctcacggcggacggcgtcatctaccacaagacctgcttcaaatgcagccactg 189
Query: 190 caaagggnnncnctcgatgtgcagctactcctccatggacgnnnnnctgtactgcaagac 249
||||||| | ||||||||||||||| || |||||||||| || |||||||||||
Sbjct: 190 caaagggatcctctcgatgtgcagctattcttccatggacggcgtcctctactgcaagac 249
Query: 250 ccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttcac 300
|||||||||||||||||||| ||| ||||||||||| ||||| |||||
Sbjct: 250 gcacttcgagcagctcttcaaagagacagggagcttctcaaagaagttcac 300
Score = 42.1 bits (21), Expect = 0.035
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 330 aactgacaagggccccaagcaagct 354
||||| |||||||||||||||||||
Sbjct: 330 aactgtcaagggccccaagcaagct 354
>gb|BJ243839.1|BJ243839 BJ243839 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf13b10 5', mRNA sequence
Length = 655
Score = 137 bits (69), Expect = 8e-031
Identities = 187/237 (78%)
Strand = Plus / Plus
Query: 69 ccatgtctttcaccggcncgcaggacaagtgcacnnnntgcgacaagaccnnccacttca 128
||||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||
Sbjct: 45 ccatgtctttcaccggcacgcaggacaagtgcaagacgtgcgacaagaccgtccatttca 104
Query: 129 tcgacctcctcacnnnnnacnnnnccatctaccataagacatgcntcaannncngccact 188
||||||||||||| || | |||||| ||||||||| |||| | ||||||
Sbjct: 105 tcgacctcctcaccgccgacggcgtctcctaccacaagacatgcttcaagtgcagccact 164
Query: 189 gcaaagggnnncnctcgatgtgcagctactcctccatggacgnnnnnctgtactgcaaga 248
|||| ||| | ||||||||||| |||||| |||||||| | || ||||||||||
Sbjct: 165 gcaaggggaccctctcgatgtgcaactactcttccatggatggtgttctctactgcaaga 224
Query: 249 cccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttcacgccag 305
|||| ||||| |||||||||||| ||| |||| |||||| ||||| || |||||||
Sbjct: 225 cccatttcgaacagctcttcaaggagacggggaacttctcaaagaattttacgccag 281
>gb|BJ247645.1|BJ247645 BJ247645 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf3c02 5', mRNA sequence
Length = 610
Score = 133 bits (67), Expect = 1e-029
Identities = 182/231 (78%)
Strand = Plus / Plus
Query: 70 catgtctttcaccggcncgcaggacaagtgcacnnnntgcgacaagaccnnccacttcat 129
||||||||| |||||| |||||||||||||| ||||| ||||| ||| |||||
Sbjct: 49 catgtctttgaccggcacgcaggacaagtgctttgcgtgcgaaaagacggtccatttcat 108
Query: 130 cgacctcctcacnnnnnacnnnnccatctaccataagacatgcntcaannncngccactg 189
|||||||||||| || ||||||||| ||||| ||| |||| | |||||||
Sbjct: 109 cgacctcctcacggcggacggcgtcatctaccacaagacctgcttcaaatgcagccactg 168
Query: 190 caaagggnnncnctcgatgtgcagctactcctccatggacgnnnnnctgtactgcaagac 249
||||||| | ||||||||||||||| || |||||||||| || |||||||||||
Sbjct: 169 caaagggatcctctcgatgtgcagctattcttccatggacggcgtcctctactgcaagac 228
Query: 250 ccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttcac 300
|||||||||||||||||||| ||| ||||||||||| ||||| |||||
Sbjct: 229 gcacttcgagcagctcttcaaagagacagggagcttctcaaagaagttcac 279
Score = 42.1 bits (21), Expect = 0.035
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 330 aactgacaagggccccaagcaagct 354
||||| |||||||||||||||||||
Sbjct: 309 aactgtcaagggccccaagcaagct 333
>gb|BJ258356.1|BJ258356 BJ258356 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh7c24 5', mRNA sequence
Length = 622
Score = 131 bits (66), Expect = 5e-029
Identities = 186/237 (78%)
Strand = Plus / Plus
Query: 69 ccatgtctttcaccggcncgcaggacaagtgcacnnnntgcgacaagaccnnccacttca 128
||||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||
Sbjct: 121 ccatgtctttcaccggcacgcaggacaagtgcaagacgtgcgacaagaccgtccatttca 180
Query: 129 tcgacctcctcacnnnnnacnnnnccatctaccataagacatgcntcaannncngccact 188
||||||||||||| || | |||||| ||||||||| |||| | ||||||
Sbjct: 181 tcgacctcctcaccgccgacggcgtctcctaccacaagacatgcttcaagtgcagccact 240
Query: 189 gcaaagggnnncnctcgatgtgcagctactcctccatggacgnnnnnctgtactgcaaga 248
||| ||| | ||||||||||| |||||| |||||||| | || ||||||||||
Sbjct: 241 gcanggggaccctctcgatgtgcaactactcttccatggatggtgttctctactgcaaga 300
Query: 249 cccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttcacgccag 305
|||| ||||| |||||||||||| ||| |||| |||||| ||||| || |||||||
Sbjct: 301 cccatttcgaacagctcttcaaggagacggggaacttctcaaagaattttacgccag 357
>gb|BJ248972.1|BJ248972 BJ248972 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf8n13 5', mRNA sequence
Length = 663
Score = 129 bits (65), Expect = 2e-028
Identities = 186/237 (78%)
Strand = Plus / Plus
Query: 69 ccatgtctttcaccggcncgcaggacaagtgcacnnnntgcgacaagaccnnccacttca 128
||||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||
Sbjct: 66 ccatgtctttcaccggcacgcaggacaagtgcaagacgtgcgacaagaccgtccatttca 125
Query: 129 tcgacctcctcacnnnnnacnnnnccatctaccataagacatgcntcaannncngccact 188
||||||||||||| || | |||||| ||||||||| |||| | ||||||
Sbjct: 126 tcgacctcctcaccgccgacggcgtctcctaccacaagacatgcttcaagtgcagccact 185
Query: 189 gcaaagggnnncnctcgatgtgcagctactcctccatggacgnnnnnctgtactgcaaga 248
|||| ||| | ||||||||||| |||||| |||||||| | || ||||||||||
Sbjct: 186 gcaaggggaccctctcgatgtgcaactactcttccatggatggtgttctctactgcaaga 245
Query: 249 cccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttcacgccag 305
|||| ||||| |||||||||||| ||| || | |||||| ||||| || |||||||
Sbjct: 246 cccatttcgaacagctcttcaaggagacgggcaacttctcaaagaattttacgccag 302
>gb|CA741431.1|CA741431 wia1c.pk002.f17 wia1c Triticum aestivum cDNA clone wia1c.pk002.f17
5' end, mRNA sequence
Length = 629
Score = 129 bits (65), Expect = 2e-028
Identities = 186/237 (78%)
Strand = Plus / Plus
Query: 69 ccatgtctttcaccggcncgcaggacaagtgcacnnnntgcgacaagaccnnccacttca 128
||||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||
Sbjct: 59 ccatgtctttcaccggcacgcaggacaagtgcaagacgtgcgacaagaccgtccatttca 118
Query: 129 tcgacctcctcacnnnnnacnnnnccatctaccataagacatgcntcaannncngccact 188
||||||||||||| || | |||||| ||||||||| |||| | ||||||
Sbjct: 119 tcgacctcctcactgccgacggcgtctcctaccacaagacatgcttcaagtgcagccact 178
Query: 189 gcaaagggnnncnctcgatgtgcagctactcctccatggacgnnnnnctgtactgcaaga 248
|||| ||| | ||||||||||| |||||| |||||||| | || ||||||||||
Sbjct: 179 gcaaggggaccctctcgatgtgcaactactcttccatggatggtgttctctactgcaaga 238
Query: 249 cccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttcacgccag 305
|||| ||||| |||||||||||| ||| || | |||||| ||||| || |||||||
Sbjct: 239 cccatttcgaacagctcttcaaggagacgggcaacttctcaaagaattttacgccag 295
>gb|BQ902219.1|BQ902219 Ta02_06b04_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_06b04, mRNA
sequence
Length = 201
Score = 115 bits (58), Expect = 3e-024
Identities = 104/123 (84%)
Strand = Plus / Minus
Query: 183 gccactgcaaagggnnncnctcgatgtgcagctactcctccatggacgnnnnnctgtact 242
|||||||||||||| | ||||||||||||||| || |||||||||| || ||||
Sbjct: 191 gccactgcaaagggatcctctcgatgtgcagctattcttccatggacggcgtcctctact 132
Query: 243 gcaagacccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttcacgc 302
||||||| ||||||||||||||||||||| ||| ||||||||||| ||||| ||||| |
Sbjct: 131 gcaagacgcacttcgagcagctcttcaaggagacagggagcttctcaaagaagttcacac 72
Query: 303 cag 305
|||
Sbjct: 71 cag 69
Score = 42.1 bits (21), Expect = 0.035
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 330 aactgacaagggccccaagcaagct 354
||||| |||||||||||||||||||
Sbjct: 44 aactgtcaagggccccaagcaagct 20
>gb|BJ253745.1|BJ253745 BJ253745 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf3c02 3', mRNA sequence
Length = 693
Score = 113 bits (57), Expect = 1e-023
Identities = 119/145 (82%)
Strand = Plus / Minus
Query: 156 tctaccataagacatgcntcaannncngccactgcaaagggnnncnctcgatgtgcagct 215
||||||| ||||| ||| |||| | |||||||||||||| | ||||||||||||||
Sbjct: 693 tctaccacaagacctgcttcaaatgcagccactgcaaagggatcctctcgatgtgcagct 634
Query: 216 actcctccatggacgnnnnnctgtactgcaagacccacttcgagcagctcttcaagnnga 275
| || |||||||||| || ||||||||||| |||||||||||||||||||| ||
Sbjct: 633 attcttccatggacggcgtcctctactgcaagacgcacttcgagcagctcttcaaagaga 574
Query: 276 ccgggagcttctccaagaacttcac 300
| ||||||||||| ||||| |||||
Sbjct: 573 cagggagcttctcaaagaagttcac 549
Score = 42.1 bits (21), Expect = 0.035
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 330 aactgacaagggccccaagcaagct 354
||||| |||||||||||||||||||
Sbjct: 519 aactgtcaagggccccaagcaagct 495
>gb|BJ253477.1|BJ253477 BJ253477 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2c02 3', mRNA sequence
Length = 696
Score = 105 bits (53), Expect = 3e-021
Identities = 99/118 (83%)
Strand = Plus / Minus
Query: 183 gccactgcaaagggnnncnctcgatgtgcagctactcctccatggacgnnnnnctgtact 242
|||||||||||||| | ||||||||||||||| || |||||||||| || ||||
Sbjct: 667 gccactgcaaagggatcctctcgatgtgcagctattcttccatggacggcgtcctctact 608
Query: 243 gcaagacccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttcac 300
||||||| |||||||||||||||||||| ||| ||||||||||| ||||| |||||
Sbjct: 607 gcaagacgcacttcgagcagctcttcaaagagacagggagcttctcaaagaagttcac 550
Score = 42.1 bits (21), Expect = 0.035
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 330 aactgacaagggccccaagcaagct 354
||||| |||||||||||||||||||
Sbjct: 519 aactgtcaagggccccaagcaagct 495
>gb|BQ901426.1|BQ901426 Ta02_19d11_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_19d11, mRNA
sequence
Length = 200
Score = 95.6 bits (48), Expect = 3e-018
Identities = 99/123 (80%)
Strand = Plus / Minus
Query: 183 gccactgcaaagggnnncnctcgatgtgcagctactcctccatggacgnnnnnctgtact 242
|||||||||||||| | ||||||||||||||| || |||||||||| || ||||
Sbjct: 191 gccactgcaaagggaycctctcgatgtgcagctattcttccatggacggcgtcctctact 132
Query: 243 gcaagacccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttcacgc 302
||||||| |||| |||||||||| |||| ||| ||||||| | | ||||| ||||| |
Sbjct: 131 gcaagacgcactycgagcagctcyycaaggagacagggagctycycaaagaagttcacac 72
Query: 303 cag 305
|||
Sbjct: 71 cag 69
Score = 42.1 bits (21), Expect = 0.035
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 330 aactgacaagggccccaagcaagct 354
||||| |||||||||||||||||||
Sbjct: 44 aactgtcaagggccccaagcaagct 20
>gb|BE500862.1|BE500862 WHE0991-0994_L10_L10ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE0991-0994_L10_L10, mRNA
sequence
Length = 457
Score = 91.7 bits (46), Expect = 4e-017
Identities = 101/123 (82%)
Strand = Plus / Plus
Query: 183 gccactgcaaagggnnncnctcgatgtgcagctactcctccatggacgnnnnnctgtact 242
|||||||||| ||| | ||||||||||| |||||| |||||||| | || ||||
Sbjct: 211 gccactgcaaggggaccctctcgatgtgcaactactcttccatggatggtgtcctctact 270
Query: 243 gcaagacccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttcacgc 302
|||||||||| |||||||||||||||||| ||| |||| |||||| ||||| || ||||
Sbjct: 271 gcaagacccatttcgagcagctcttcaaggagacggggaacttctcaaagaattttacgc 330
Query: 303 cag 305
|||
Sbjct: 331 cag 333
Score = 79.8 bits (40), Expect = 2e-013
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 69 ccatgtctttcaccggcncgcaggacaagtgcacnnnntgcgacaagaccnnccacttca 128
||||||||||||||||| | ||||||||||||| |||||||||||| ||| ||||
Sbjct: 96 ccatgtctttcaccggcacacaggacaagtgcaagacgtgcgacaagaccgtccatttca 155
Query: 129 tcgacctcctcac 141
|||||||||||||
Sbjct: 156 tcgacctcctcac 168
>gb|CA593420.1|CA593420 wpa1c.pk003.j13 wpa1c Triticum aestivum cDNA clone wpa1c.pk003.j13
5' end, mRNA sequence
Length = 511
Score = 87.7 bits (44), Expect = 7e-016
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 69 ccatgtctttcaccggcncgcaggacaagtgcacnnnntgcgacaagaccnnccacttca 128
||||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||
Sbjct: 127 ccatgtctttcaccggcacgcaggacaagtgcaagacgtgcgacaagaccgtccatttca 186
Query: 129 tcgacctcctcac 141
|||||||||||||
Sbjct: 187 tcgacctcctcac 199
Score = 58.0 bits (29), Expect = 6e-007
Identities = 59/72 (81%)
Strand = Plus / Plus
Query: 157 ctaccataagacatgcntcaannncngccactgcaaagggnnncnctcgatgtgcagcta 216
|||||| ||||||||| |||| | |||||||||| ||| | ||||||||||| |||
Sbjct: 216 ctaccacaagacatgcttcaagtgcagccactgcaaggggaccctctcgatgtgcaacta 275
Query: 217 ctcctccatgga 228
||| ||||||||
Sbjct: 276 ctcttccatgga 287
>gb|BJ247418.1|BJ247418 BJ247418 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2c02 5', mRNA sequence
Length = 198
Score = 85.7 bits (43), Expect = 3e-015
Identities = 118/147 (80%)
Strand = Plus / Plus
Query: 154 catctaccataagacatgcntcaannncngccactgcaaagggnnncnctcgatgtgcag 213
||||||||| ||||| ||| |||| | | |||||||||||| | || ||||||||
Sbjct: 19 catctaccacaagacctgcttcaaatgcagncactgcaaagggatcctgtcnatgtgcag 78
Query: 214 ctactcctccatggacgnnnnnctgtactgcaagacccacttcgagcagctcttcaagnn 273
||| || |||||||||| |||| ||||||||||| |||||| ||||| |||||||
Sbjct: 79 ctattcttccatggacggcgnnctctactgcaagacgcacttcnagcagntcttcaaaga 138
Query: 274 gaccgggagcttctccaagaacttcac 300
||| ||||||||||| ||||| |||||
Sbjct: 139 gacagggagcttctcaaagaagttcac 165
>gb|BI750799.1|BI750799 Ta01_02d02_R
Ta01_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta01_02d02, mRNA
sequence
Length = 434
Score = 79.8 bits (40), Expect = 2e-013
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 69 ccatgtctttcaccggcncgcaggacaagtgcacnnnntgcgacaagaccnnccacttca 128
|||||| |||||||||| ||||||||||||||| |||||||||||| ||| ||||
Sbjct: 337 ccatgtttttcaccggcacgcaggacaagtgcaagacgtgcgacaagaccgtccatttca 278
Query: 129 tcgacctcctcac 141
|||||||||||||
Sbjct: 277 tcgacctcctcac 265
Score = 69.9 bits (35), Expect = 2e-010
Identities = 115/149 (77%)
Strand = Plus / Minus
Query: 157 ctaccataagacatgcntcaannncngccactgcaaagggnnncnctcgatgtgcagcta 216
|||||| || |||||| |||| | |||||||||| | | | ||||||||||| |||
Sbjct: 250 ctaccacaaracatgcttcaagtgcagccactgcaaggvgaccctctcgatgtgcaacta 191
Query: 217 ctcctccatggacgnnnnnctgtactgcaagacccacttcgagcagctcttcaagnngac 276
||| |||||||| | | |||||||||||||| ||||| |||||||||||| |||
Sbjct: 190 ctcttccatggatggtgttttctactgcaagacccatttcgaacagctcttcaaggagac 131
Query: 277 cgggagcttctccaagaacttcacgccag 305
|| | |||||| |||| || |||||||
Sbjct: 130 gggcaacttctcaaagawttttacgccag 102
>gb|CD454196.1|CD454196 WHE0991-0994_L10_L10ZT CS wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE0991-0994_L10_L10, mRNA
sequence
Length = 726
Score = 71.9 bits (36), Expect = 4e-011
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 240 actgcaagacccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttca 299
||||||||||||| |||||||||||||||||| ||| |||| |||||| ||||| || |
Sbjct: 726 actgcaagacccatttcgagcagctcttcaaggagacggggaacttctcaaagaatttta 667
Query: 300 cgccag 305
||||||
Sbjct: 666 cgccag 661
>gb|BJ263949.1|BJ263949 BJ263949 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh7c24 3', mRNA sequence
Length = 655
Score = 65.9 bits (33), Expect = 2e-009
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttc 298
|||||||||||||| ||||| |||||||||||| ||| |||| |||||| ||||| ||
Sbjct: 652 tactgcaagacccatttcgaacagctcttcaaggagacggggaacttctcaaagaatttt 593
Query: 299 acgccag 305
|||||||
Sbjct: 592 acgccag 586
>gb|BJ285828.1|BJ285828 BJ285828 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr13b10 3', mRNA sequence
Length = 666
Score = 65.9 bits (33), Expect = 2e-009
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttc 298
|||||||||||||| ||||| |||||||||||| ||| |||| |||||| ||||| ||
Sbjct: 652 tactgcaagacccatttcgaacagctcttcaaggagacggggaacttctcaaagaatttt 593
Query: 299 acgccag 305
|||||||
Sbjct: 592 acgccag 586
>gb|BJ255222.1|BJ255222 BJ255222 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf8n13 3', mRNA sequence
Length = 653
Score = 60.0 bits (30), Expect = 2e-007
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagcttctccaagaacttc 298
|||||||||||||| ||||| ||||||||||||| ||| || | |||||| ||||| ||
Sbjct: 650 tactgcaagacccatttcgancagctcttcaagnagacgggcaacttctcaaagaatttt 591
Query: 299 acgccag 305
|||||||
Sbjct: 590 acgccag 584
>gb|BE499235.1|BE499235 WHE0972_G04_M08ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0972_G04_M08, mRNA sequence
Length = 544
Score = 52.0 bits (26), Expect = 4e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 203 tcgatgtgcagctactcctccatgga 228
||||||||||||||||||||||||||
Sbjct: 227 tcgatgtgcagctactcctccatgga 252
>gb|BF482309.1|BF482309 WHE1797_B12_D23ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1797_B12_D23, mRNA sequence
Length = 574
Score = 52.0 bits (26), Expect = 4e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 203 tcgatgtgcagctactcctccatgga 228
||||||||||||||||||||||||||
Sbjct: 226 tcgatgtgcagctactcctccatgga 251
>gb|BF482590.1|BF482590 WHE2301-2304_G20_G20ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE2301-2304_G20_G20, mRNA
sequence
Length = 419
Score = 52.0 bits (26), Expect = 4e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 203 tcgatgtgcagctactcctccatgga 228
||||||||||||||||||||||||||
Sbjct: 251 tcgatgtgcagctactcctccatgga 276
>gb|BJ243425.1|BJ243425 BJ243425 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf11b19 5', mRNA sequence
Length = 508
Score = 52.0 bits (26), Expect = 4e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 203 tcgatgtgcagctactcctccatgga 228
||||||||||||||||||||||||||
Sbjct: 237 tcgatgtgcagctactcctccatgga 262
>gb|BQ904979.1|BQ904979 Ta04_13i05_R
Ta04_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta04_13i05, mRNA
sequence
Length = 498
Score = 52.0 bits (26), Expect = 4e-005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 203 tcgatgtgcagctactcctccatgga 228
||||||||||||||||||||||||||
Sbjct: 202 tcgatgtgcagctactcctccatgga 177
>gb|CA594449.1|CA594449 wpa1c.pk007.k12 wpa1c Triticum aestivum cDNA clone wpa1c.pk007.k12
5' end, mRNA sequence
Length = 533
Score = 52.0 bits (26), Expect = 4e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 203 tcgatgtgcagctactcctccatgga 228
||||||||||||||||||||||||||
Sbjct: 266 tcgatgtgcagctactcctccatgga 291
>gb|CA595523.1|CA595523 wpa1c.pk010.g10 wpa1c Triticum aestivum cDNA clone wpa1c.pk010.g10
5' end, mRNA sequence
Length = 604
Score = 52.0 bits (26), Expect = 4e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 203 tcgatgtgcagctactcctccatgga 228
||||||||||||||||||||||||||
Sbjct: 271 tcgatgtgcagctactcctccatgga 296
>gb|CN013186.1|CN013186 WHE3957_G05_N09ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3957_G05_N09,
mRNA sequence
Length = 668
Score = 52.0 bits (26), Expect = 4e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 203 tcgatgtgcagctactcctccatgga 228
||||||||||||||||||||||||||
Sbjct: 244 tcgatgtgcagctactcctccatgga 269
>gb|BE445279.1|BE445279 WHE1134_G11_M22ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1134_G11_M22,
mRNA sequence
Length = 546
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 262 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 307
>gb|BE500351.1|BE500351 WHE0982_G05_N10ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0982_G05_N10, mRNA sequence
Length = 550
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 2 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 47
>gb|BE586057.1|BE586057 Est#8pT7_C08_c8_054 KSU wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
Est#8pT7_C08_c8_054, mRNA sequence
Length = 708
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 370 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 415
>gb|BE590942.1|BE590942 WHE0870_B08_D16ZS Wheat 20-45 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0870_B08_D16, mRNA sequence
Length = 479
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 285 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 330
>gb|BE637921.1|BE637921 WHE1755-1758_P08_P08ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE1755-1758_P08_P08, mRNA
sequence
Length = 461
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 179 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 224
>gb|BI750619.1|BI750619 Ta01_10e01_R
Ta01_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta01_10e01, mRNA
sequence
Length = 778
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 654 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 609
>gb|BM138271.1|BM138271 WHE0493_E08_J15ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0493_E08_J15,
mRNA sequence
Length = 618
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 141 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 186
>gb|BJ210800.1|BJ210800 BJ210800 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh29o22 5', mRNA sequence
Length = 670
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 316 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 361
>gb|BJ211265.1|BJ211265 BJ211265 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh38n01 5', mRNA sequence
Length = 427
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 310 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 355
>gb|BJ224248.1|BJ224248 BJ224248 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl9a07 5', mRNA sequence
Length = 665
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 314 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 359
>gb|BJ218078.1|BJ218078 BJ218078 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh29o22 3', mRNA sequence
Length = 626
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 612 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 567
>gb|BJ218644.1|BJ218644 BJ218644 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh38n01 3', mRNA sequence
Length = 628
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 612 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 567
>gb|BJ228779.1|BJ228779 BJ228779 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl8b21 3', mRNA sequence
Length = 370
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 355 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 310
>gb|BJ300952.1|BJ300952 BJ300952 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd5d10 5', mRNA sequence
Length = 721
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 368 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 413
>gb|BJ306766.1|BJ306766 BJ306766 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd5d10 3', mRNA sequence
Length = 704
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 606 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 561
>gb|AL816686.1|AL816686 AL816686 l:226 Triticum aestivum cDNA clone H04_l226_plate_1, mRNA
sequence
Length = 451
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 94 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 139
>gb|AL825122.1|AL825122 AL825122 p:234 Triticum aestivum cDNA clone D07_p234_plate_13, mRNA
sequence
Length = 567
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 398 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 443
>gb|AL826109.1|AL826109 AL826109 p:436 Triticum aestivum cDNA clone E04_p436_plate_3, mRNA
sequence
Length = 335
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 221 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 266
>gb|AL826929.1|AL826929 AL826929 p:638 Triticum aestivum cDNA clone G12_p638_plate_9, mRNA
sequence
Length = 542
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 342 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 387
>gb|AL828058.1|AL828058 AL828058 p:739 Triticum aestivum cDNA clone E10_p739_plate_5_run_2,
mRNA sequence
Length = 587
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 204 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 249
>gb|AL829505.1|AL829505 AL829505 p:840 Triticum aestivum cDNA clone D09_p840_plate_1, mRNA
sequence
Length = 537
Score = 48.1 bits (24), Expect = 6e-004
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 239 tactgcaagacccacttcgagcagctcttcaagnngaccgggagct 284
||||||||| |||| |||| |||||| |||||| |||||||||||
Sbjct: 1 tactgcaagccccatttcgcgcagctgttcaaggagaccgggagct 46
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 49,511
Number of Sequences: 636343
Number of extensions: 49511
Number of successful extensions: 13625
Number of sequences better than 0.5: 83
Number of HSP's better than 0.5 without gapping: 82
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 13427
Number of HSP's gapped (non-prelim): 190
length of query: 494
length of database: 367,240,239
effective HSP length: 19
effective length of query: 475
effective length of database: 355,149,722
effective search space: 168696117950
effective search space used: 168696117950
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)