BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAZ1h07.yg.2.1
(357 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA623241.1|CA623241 wl1n.pk0104.f12 wl1n Triticum aestiv... 62 3e-008
gb|BE420061.1|BE420061 WWS02.F9R000101 ITEC WWS Wheat Scute... 60 1e-007
gb|BE516112.1|BE516112 WHE612_B11_D22ZA Wheat ABA-treated e... 60 1e-007
gb|AL820997.1|AL820997 AL820997 O:232 Triticum aestivum cDN... 60 1e-007
gb|BQ743343.1|BQ743343 WHE4102_H05_O10ZS Wheat salt-stresse... 60 1e-007
gb|BU100291.1|BU100291 WHE3351_E09_I17ZS Chinese Spring alu... 60 1e-007
gb|CA602800.1|CA602800 wr1.pk0008.d6 wr1 Triticum aestivum ... 60 1e-007
gb|CA618328.1|CA618328 wl1n.pk0032.f12 wl1n Triticum aestiv... 60 1e-007
gb|CD873783.1|CD873783 AZO3.100K14R011123 AZO3 Triticum aes... 60 1e-007
gb|AJ611846.1|AJ611846 AJ611846 Triticum turgidum subsp. du... 60 1e-007
gb|AJ613085.1|AJ613085 AJ613085 Triticum turgidum subsp. du... 60 1e-007
gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, compl... 60 1e-007
gb|BE499408.1|BE499408 WHE0974_G07_N14ZS Wheat pre-anthesis... 56 2e-006
gb|BQ807160.1|BQ807160 WHE3587_E04_I07ZS Wheat developing g... 56 2e-006
gb|BJ229395.1|BJ229395 BJ229395 Y. Ogihara unpublished cDNA... 56 2e-006
gb|BJ239299.1|BJ239299 BJ239299 Y. Ogihara unpublished cDNA... 56 2e-006
gb|BJ275770.1|BJ275770 BJ275770 Y. Ogihara unpublished cDNA... 56 2e-006
gb|BJ295305.1|BJ295305 BJ295305 Y. Ogihara unpublished cDNA... 56 2e-006
gb|BJ296702.1|BJ296702 BJ296702 Y. Ogihara unpublished cDNA... 56 2e-006
gb|BJ299490.1|BJ299490 BJ299490 Y. Ogihara unpublished cDNA... 56 2e-006
gb|BJ321567.1|BJ321567 BJ321567 Y. Ogihara unpublished cDNA... 56 2e-006
gb|CD915165.1|CD915165 G550.125E21R010921 G550 Triticum aes... 56 2e-006
gb|CD920343.1|CD920343 G608.116L23F010912 G608 Triticum aes... 56 2e-006
gb|CD931238.1|CD931238 GR45.113N21R010612 GR45 Triticum aes... 56 2e-006
gb|CK206588.1|CK206588 FGAS018187 Triticum aestivum FGAS: L... 56 2e-006
gb|AL813164.1|AL813164 AL813164 e:411 Triticum aestivum cDN... 56 2e-006
gb|AY543536.1| Triticum aestivum expansin EXPB1 mRNA, compl... 56 2e-006
gb|BF200271.1|BF200271 WHE2254_H10_P20ZE Triticum monococcu... 54 7e-006
gb|BG607190.1|BG607190 WHE2472_E02_I04ZS Triticum monococcu... 54 7e-006
gb|CD876827.1|CD876827 AZO3.111A15F011010 AZO3 Triticum aes... 54 7e-006
gb|BJ282673.1|BJ282673 BJ282673 Y. Ogihara unpublished cDNA... 52 3e-005
gb|BJ288382.1|BJ288382 BJ288382 Y. Ogihara unpublished cDNA... 52 3e-005
gb|BJ297065.1|BJ297065 BJ297065 Y. Ogihara unpublished cDNA... 52 3e-005
gb|BJ297327.1|BJ297327 BJ297327 Y. Ogihara unpublished cDNA... 52 3e-005
gb|CK211812.1|CK211812 FGAS023673 Triticum aestivum FGAS: L... 52 3e-005
gb|DR739962.1|DR739962 FGAS000228 Triticum aestivum FGAS: L... 52 3e-005
gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA... 52 3e-005
gb|AJ614162.1|AJ614162 AJ614162 Triticum turgidum subsp. du... 50 1e-004
gb|CV780550.1|CV780550 FGAS074961 Triticum aestivum FGAS: L... 50 1e-004
gb|BJ267460.1|BJ267460 BJ267460 Y. Ogihara unpublished cDNA... 48 4e-004
gb|CA497485.1|CA497485 WHE3228_D10_H20ZT Wheat meiotic anth... 48 4e-004
gb|CD928018.1|CD928018 GR45.103M14F010315 GR45 Triticum aes... 48 4e-004
gb|CB307251.1|CB307251 HFIG236 Hessian fly infested cDNA li... 48 4e-004
gb|CK207985.1|CK207985 FGAS019660 Triticum aestivum FGAS: L... 48 4e-004
gb|AL811840.1|AL811840 AL811840 d:15 Triticum aestivum cDNA... 48 4e-004
gb|DR739489.1|DR739489 FGAS084706 Triticum aestivum FGAS: L... 48 4e-004
gb|BE426055.1|BE426055 WHE0327_C05_F09ZS Wheat unstressed s... 46 0.002
gb|BE496838.1|BE496838 WHE0761_F08_L15ZS Wheat heat-stresse... 46 0.002
gb|BJ246126.1|BJ246126 BJ246126 Y. Ogihara unpublished cDNA... 46 0.002
gb|BJ279736.1|BJ279736 BJ279736 Y. Ogihara unpublished cDNA... 46 0.002
gb|AL822039.1|AL822039 AL822039 N:130 Triticum aestivum cDN... 46 0.002
gb|CA705353.1|CA705353 wdk1c.pk019.i2 wdk1c Triticum aestiv... 46 0.002
gb|CD868353.1|CD868353 AZO2.108K01F001113 AZO2 Triticum aes... 46 0.002
gb|CD868354.1|CD868354 AZO2.108K01R010328 AZO2 Triticum aes... 46 0.002
gb|CD877922.1|CD877922 AZO4.101H13F011002 AZO4 Triticum aes... 46 0.002
gb|CV065648.1|CV065648 WNEL25E3 Wheat EST endosperm library... 46 0.002
gb|AY589582.1| Triticum aestivum beta-expansin TaEXPB5 mRNA... 46 0.002
gb|AY543542.1| Triticum aestivum expansin EXPB8 mRNA, compl... 46 0.002
gb|AY543544.1| Triticum aestivum expansin EXPB10 mRNA, comp... 46 0.002
gb|BE404627.1|BE404627 WHE0445_E03_I05ZS Wheat etiolated se... 44 0.006
gb|BE430196.1|BE430196 SUN000.B08R990802 ITEC SUN Wheat cDN... 44 0.006
gb|BJ217471.1|BJ217471 BJ217471 Y. Ogihara unpublished cDNA... 44 0.006
gb|BJ320686.1|BJ320686 BJ320686 Y. Ogihara unpublished cDNA... 44 0.006
gb|BJ296154.1|BJ296154 BJ296154 Y. Ogihara unpublished cDNA... 44 0.006
gb|BJ297006.1|BJ297006 BJ297006 Y. Ogihara unpublished cDNA... 44 0.006
gb|CA707463.1|CA707463 wdk2c.pk006.i12 wdk2c Triticum aesti... 44 0.006
gb|CA717228.1|CA717228 wdk4c.pk005.h8 wdk4c Triticum aestiv... 44 0.006
gb|CD373631.1|CD373631 WHE0445_E03_I05ZT CS wheat etiolated... 44 0.006
gb|CD886591.1|CD886591 G118.102L09F010601 G118 Triticum aes... 44 0.006
gb|CD886592.1|CD886592 G118.102L09R010922 G118 Triticum aes... 44 0.006
gb|CD887803.1|CD887803 G118.106E23F010606 G118 Triticum aes... 44 0.006
gb|CD913065.1|CD913065 G550.116L22F010525 G550 Triticum aes... 44 0.006
gb|CD927249.1|CD927249 GR45.101I12F010315 GR45 Triticum aes... 44 0.006
gb|CK166717.1|CK166717 FGAS050915 Triticum aestivum FGAS: T... 44 0.006
gb|CK211932.1|CK211932 FGAS023794 Triticum aestivum FGAS: L... 44 0.006
gb|AY589579.1| Triticum aestivum beta-expansin TaEXPB2 mRNA... 44 0.006
gb|AY543538.1| Triticum aestivum expansin EXPB3 mRNA, compl... 44 0.006
gb|CA654411.1|CA654411 wre1n.pk164.h2 wre1n Triticum aestiv... 42 0.025
gb|CK152852.1|CK152852 FGAS035928 Triticum aestivum FGAS: T... 42 0.025
gb|BE493526.1|BE493526 WHE0579_B12_B12ZE Triticum monococcu... 40 0.099
gb|BG606555.1|BG606555 WHE2957_H02_P03ZS Wheat dormant embr... 40 0.099
gb|BJ208652.1|BJ208652 BJ208652 Y. Ogihara unpublished cDNA... 40 0.099
gb|BJ247259.1|BJ247259 BJ247259 Y. Ogihara unpublished cDNA... 40 0.099
gb|BJ279420.1|BJ279420 BJ279420 Y. Ogihara unpublished cDNA... 40 0.099
gb|BJ301660.1|BJ301660 BJ301660 Y. Ogihara unpublished cDNA... 40 0.099
gb|BJ307916.1|BJ307916 BJ307916 Y. Ogihara unpublished cDNA... 40 0.099
gb|BJ315203.1|BJ315203 BJ315203 Y. Ogihara unpublished cDNA... 40 0.099
gb|BQ295116.1|BQ295116 WHE2858_D09_H18ZS Wheat unstressed r... 40 0.099
gb|AL818337.1|AL818337 AL818337 j:223 Triticum aestivum cDN... 40 0.099
gb|BQ752757.1|BQ752757 WHE4118_G09_M18ZS Wheat salt-stresse... 40 0.099
gb|BQ805763.1|BQ805763 WHE3570_G03_N06ZS Wheat developing g... 40 0.099
gb|BQ807275.1|BQ807275 WHE3588_H04_O08ZS Wheat developing g... 40 0.099
gb|BQ838361.1|BQ838361 WHE2909_E12_I23ZS Wheat aluminum-str... 40 0.099
gb|BQ839391.1|BQ839391 WHE4165_E11_J21ZS Wheat CS whole pla... 40 0.099
gb|BJ224620.1|BJ224620 BJ224620 Y. Ogihara unpublished cDNA... 40 0.099
gb|BJ270775.1|BJ270775 BJ270775 Y. Ogihara unpublished cDNA... 40 0.099
gb|BJ289022.1|BJ289022 BJ289022 Y. Ogihara unpublished cDNA... 40 0.099
gb|BJ290443.1|BJ290443 BJ290443 Y. Ogihara unpublished cDNA... 40 0.099
gb|BJ291658.1|BJ291658 BJ291658 Y. Ogihara unpublished cDNA... 40 0.099
gb|BJ316076.1|BJ316076 BJ316076 Y. Ogihara unpublished cDNA... 40 0.099
gb|CA633071.1|CA633071 wle1n.pk0065.e4 wle1n Triticum aesti... 40 0.099
gb|CD868443.1|CD868443 AZO2.108O03R010328 AZO2 Triticum aes... 40 0.099
gb|CD873782.1|CD873782 AZO3.100K14F010925 AZO3 Triticum aes... 40 0.099
gb|CD891593.1|CD891593 G118.117N01F010724 G118 Triticum aes... 40 0.099
gb|CD895092.1|CD895092 G118.127P15F010824 G118 Triticum aes... 40 0.099
gb|CD895093.1|CD895093 G118.127P15R011119 G118 Triticum aes... 40 0.099
gb|CD903937.1|CD903937 G356.111O21F010919 G356 Triticum aes... 40 0.099
gb|CD915164.1|CD915164 G550.125E21F010713 G550 Triticum aes... 40 0.099
gb|CD930576.1|CD930576 GR45.111L19F010418 GR45 Triticum aes... 40 0.099
gb|CD930868.1|CD930868 GR45.112K21F010511 GR45 Triticum aes... 40 0.099
gb|CD930909.1|CD930909 GR45.112N09F010418 GR45 Triticum aes... 40 0.099
gb|CD931237.1|CD931237 GR45.113N21F010419 GR45 Triticum aes... 40 0.099
gb|AJ602412.1|AJ602412 AJ602412 T05 Triticum aestivum cDNA ... 40 0.099
gb|CK167447.1|CK167447 FGAS051809 Triticum aestivum FGAS: T... 40 0.099
gb|CK168342.1|CK168342 FGAS052869 Triticum aestivum FGAS: T... 40 0.099
gb|CK198714.1|CK198714 FGAS007201 Triticum aestivum FGAS: L... 40 0.099
gb|CK201354.1|CK201354 FGAS009873 Triticum aestivum FGAS: L... 40 0.099
gb|CK202440.1|CK202440 FGAS010964 Triticum aestivum FGAS: L... 40 0.099
gb|CK217350.1|CK217350 FGAS029352 Triticum aestivum FGAS: L... 40 0.099
gb|AJ611557.1|AJ611557 AJ611557 Triticum turgidum subsp. du... 40 0.099
gb|CV776993.1|CV776993 FGAS071397 Triticum aestivum FGAS: L... 40 0.099
gb|CV778638.1|CV778638 FGAS073047 Triticum aestivum FGAS: L... 40 0.099
gb|CV780052.1|CV780052 FGAS074461 Triticum aestivum FGAS: L... 40 0.099
gb|AY589578.1| Triticum aestivum beta-expansin TaEXPB1 mRNA... 40 0.099
gb|AY589581.1| Triticum aestivum beta-expansin TaEXPB4 mRNA... 40 0.099
gb|BE402628.1|BE402628 CSB009H10F990908 ITEC CSB Wheat Endo... 38 0.39
gb|BE413992.1|BE413992 SCU005.B07.R990714 ITEC SCU Wheat En... 38 0.39
gb|BJ222680.1|BJ222680 BJ222680 Y. Ogihara unpublished cDNA... 38 0.39
gb|BQ245149.1|BQ245149 TaE15030A03R TaE15 Triticum aestivum... 38 0.39
gb|BQ295164.1|BQ295164 WHE2858_H09_P18ZS Wheat unstressed r... 38 0.39
gb|BQ606648.1|BQ606648 BRY_2513 wheat EST endosperm library... 38 0.39
gb|BQ608206.1|BQ608206 BRY_4110 wheat EST endosperm library... 38 0.39
gb|BQ743441.1|BQ743441 WHE4104_A06_B12ZS Wheat salt-stresse... 38 0.39
gb|BU099368.1|BU099368 WHE3306_F05_K10ZS Chinese Spring whe... 38 0.39
gb|BJ290486.1|BJ290486 BJ290486 Y. Ogihara unpublished cDNA... 38 0.39
gb|BJ290721.1|BJ290721 BJ290721 Y. Ogihara unpublished cDNA... 38 0.39
gb|CA725021.1|CA725021 wds3f.pk003.m6 wds3f Triticum aestiv... 38 0.39
gb|BQ167664.1|BQ167664 WHE0086_A10_B20ZK Cheyenne wheat end... 38 0.39
gb|U91981.1|TAU91981 Triticum aestivum pollen allergen homo... 38 0.39
>gb|CA623241.1|CA623241 wl1n.pk0104.f12 wl1n Triticum aestivum cDNA clone wl1n.pk0104.f12
5' end, mRNA sequence
Length = 495
Score = 61.9 bits (31), Expect = 3e-008
Identities = 87/109 (79%)
Strand = Plus / Plus
Query: 181 tacttagcagtgctcgtcgagttcgaannnngcgatggcgatgtgnnncaggtggacata 240
||||| || ||||| |||||||||||| |||| ||||| | | ||||||||| |
Sbjct: 137 tacttcgcggtgctggtcgagttcgaagacggcgacggcgacgcggtgcaggtggacctc 196
Query: 241 ntggaggccaactctgggtggtggatgccgatgcgnnagtcgtggggat 289
||||||||||||||| || ||||| ||||||||| |||| |||||||
Sbjct: 197 atggaggccaactctgcgtcgtggacgccgatgcgcgagtcctggggat 245
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 cgccggcatcatcgacatccagtt 110
||||||||||||||||||||||||
Sbjct: 43 cgccggcatcatcgacatccagtt 66
>gb|BE420061.1|BE420061 WWS02.F9R000101 ITEC WWS Wheat Scutellum Library Triticum aestivum
cDNA clone WWS02.F9, mRNA sequence
Length = 538
Score = 60.0 bits (30), Expect = 1e-007
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| |||||||||||| |||| ||||| ||||||||| |||| |||||
Sbjct: 67 caggtggacatgaaggaggccaactccgggtcgtggacgccgatgcgcgagtcctggggc 126
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 127 tccatctggcggatggactccaa 149
>gb|BE516112.1|BE516112 WHE612_B11_D22ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE612_B11_D22, mRNA sequence
Length = 438
Score = 60.0 bits (30), Expect = 1e-007
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| |||||||||||| |||| ||||| ||||||||| |||| |||||
Sbjct: 249 caggtggacatgaaggaggccaactccgggtcgtggacgccgatgcgcgagtcctggggc 308
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 309 tccatctggcggatggactccaa 331
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 111 ggcatcatcgacatccagtt 130
>gb|AL820997.1|AL820997 AL820997 O:232 Triticum aestivum cDNA clone F02_O232_plate_10, mRNA
sequence
Length = 398
Score = 60.0 bits (30), Expect = 1e-007
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| |||||||||||| |||| ||||| ||||||||| |||| |||||
Sbjct: 246 caggtggacatgaaggaggccaactccgggtcgtggacgccgatgcgcgagtcctggggc 305
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 306 tccatctggcggatggactccaa 328
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 108 ggcatcatcgacatccagtt 127
>gb|BQ743343.1|BQ743343 WHE4102_H05_O10ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4102_H05_O10, mRNA sequence
Length = 699
Score = 60.0 bits (30), Expect = 1e-007
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| |||||||||||| |||| ||||| ||||||||| |||| |||||
Sbjct: 315 caggtggacatgaaggaggccaactccgggtcgtggacgccgatgcgcgagtcctggggc 374
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 375 tccatctggcggatggactccaa 397
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 177 ggcatcatcgacatccagtt 196
>gb|BU100291.1|BU100291 WHE3351_E09_I17ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3351_E09_I17,
mRNA sequence
Length = 760
Score = 60.0 bits (30), Expect = 1e-007
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| |||||||||||| |||| ||||| ||||||||| |||| |||||
Sbjct: 673 caggtggacatgaaggaggccaactccgggtcgtggacgccgatgcgcgagtcctggggc 732
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 733 tccatctggcggatggactccaa 755
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 535 ggcatcatcgacatccagtt 554
>gb|CA602800.1|CA602800 wr1.pk0008.d6 wr1 Triticum aestivum cDNA clone wr1.pk0008.d6 5'
end, mRNA sequence
Length = 520
Score = 60.0 bits (30), Expect = 1e-007
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| |||||||||||| |||| ||||| ||||||||| |||| |||||
Sbjct: 207 caggtggacatgaaggaggccaactccgggtcgtggacgccgatgcgcgagtcctggggc 266
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 267 tccatctggcggatggactccaa 289
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 69 ggcatcatcgacatccagtt 88
>gb|CA618328.1|CA618328 wl1n.pk0032.f12 wl1n Triticum aestivum cDNA clone wl1n.pk0032.f12
5' end, mRNA sequence
Length = 533
Score = 60.0 bits (30), Expect = 1e-007
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| |||||||||||| |||| ||||| ||||||||| |||| |||||
Sbjct: 83 caggtggacatgaaggaggccaactccgggtcgtggacgccgatgcgcgagtcctggggc 142
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 143 tccatctggcggatggactccaa 165
>gb|CD873783.1|CD873783 AZO3.100K14R011123 AZO3 Triticum aestivum cDNA clone AZO3100K14,
mRNA sequence
Length = 722
Score = 60.0 bits (30), Expect = 1e-007
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| |||||||||||| |||| ||||| ||||||||| |||| |||||
Sbjct: 424 caggtggacatgaaggaggccaactccgggtcgtggacgccgatgcgcgagtcctggggc 365
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 364 tccatctggcggatggactccaa 342
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 562 ggcatcatcgacatccagtt 543
>gb|AJ611846.1|AJ611846 AJ611846 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 05522R, mRNA
sequence
Length = 716
Score = 60.0 bits (30), Expect = 1e-007
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| |||||||||||| |||| ||||| ||||||||| |||| |||||
Sbjct: 302 caggtggacatgaaggaggccaactccgggtcgtggacgccgatgcgcgagtcctggggc 361
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 362 tccatctggcggatggactccaa 384
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 164 ggcatcatcgacatccagtt 183
>gb|AJ613085.1|AJ613085 AJ613085 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 08266R, mRNA
sequence
Length = 717
Score = 60.0 bits (30), Expect = 1e-007
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| |||||||||||| |||| ||||| ||||||||| |||| |||||
Sbjct: 333 caggtggacatgaaggaggccaactccgggtcgtggacgccgatgcgcgagtcctggggc 392
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 393 tccatctggcggatggactccaa 415
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 195 ggcatcatcgacatccagtt 214
>gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds
Length = 1056
Score = 60.0 bits (30), Expect = 1e-007
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| |||||||||||| |||| ||||| ||||||||| |||| |||||
Sbjct: 679 caggtggacatgaaggaggccaactccgggtcgtggacgccgatgcgcgagtcctggggc 738
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 739 tccatctggcggatggactccaa 761
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 541 ggcatcatcgacatccagtt 560
>gb|BE499408.1|BE499408 WHE0974_G07_N14ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0974_G07_N14, mRNA sequence
Length = 572
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 281 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 340
Query: 289 t 289
|
Sbjct: 341 t 341
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 143 ggcatcatcgacatccagtt 162
>gb|BQ807160.1|BQ807160 WHE3587_E04_I07ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3587_E04_I07, mRNA sequence
Length = 753
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 666 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 725
Query: 289 t 289
|
Sbjct: 726 t 726
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 528 ggcatcatcgacatccagtt 547
>gb|BJ229395.1|BJ229395 BJ229395 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl19i21 3', mRNA sequence
Length = 723
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 487 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 428
Query: 289 t 289
|
Sbjct: 427 t 427
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 625 ggcatcatcgacatccagtt 606
>gb|BJ239299.1|BJ239299 BJ239299 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe5l12 3', mRNA sequence
Length = 669
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 483 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 424
Query: 289 t 289
|
Sbjct: 423 t 423
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 621 ggcatcatcgacatccagtt 602
>gb|BJ275770.1|BJ275770 BJ275770 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh9i11 3', mRNA sequence
Length = 617
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 460 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 401
Query: 289 t 289
|
Sbjct: 400 t 400
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 598 ggcatcatcgacatccagtt 579
>gb|BJ295305.1|BJ295305 BJ295305 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl2m09 3', mRNA sequence
Length = 658
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 483 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 424
Query: 289 t 289
|
Sbjct: 423 t 423
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 621 ggcatcatcgacatccagtt 602
>gb|BJ296702.1|BJ296702 BJ296702 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl14d04 3', mRNA sequence
Length = 642
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 487 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 428
Query: 289 t 289
|
Sbjct: 427 t 427
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 625 ggcatcatcgacatccagtt 606
>gb|BJ299490.1|BJ299490 BJ299490 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl30k19 3', mRNA sequence
Length = 640
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 487 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 428
Query: 289 t 289
|
Sbjct: 427 t 427
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 625 ggcatcatcgacatccagtt 606
>gb|BJ321567.1|BJ321567 BJ321567 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf21g24 3', mRNA sequence
Length = 656
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 483 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 424
Query: 289 t 289
|
Sbjct: 423 t 423
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 621 ggcatcatcgacatccagtt 602
>gb|CD915165.1|CD915165 G550.125E21R010921 G550 Triticum aestivum cDNA clone G550125E21,
mRNA sequence
Length = 610
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 495 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 436
Query: 289 t 289
|
Sbjct: 435 t 435
>gb|CD920343.1|CD920343 G608.116L23F010912 G608 Triticum aestivum cDNA clone G608116L23,
mRNA sequence
Length = 778
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 693 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 752
Query: 289 t 289
|
Sbjct: 753 t 753
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 555 ggcatcatcgacatccagtt 574
>gb|CD931238.1|CD931238 GR45.113N21R010612 GR45 Triticum aestivum cDNA clone GR45113N21,
mRNA sequence
Length = 709
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 495 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 436
Query: 289 t 289
|
Sbjct: 435 t 435
>gb|CK206588.1|CK206588 FGAS018187 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1163
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 363 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 422
Query: 289 t 289
|
Sbjct: 423 t 423
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 225 ggcatcatcgacatccagtt 244
>gb|AL813164.1|AL813164 AL813164 e:411 Triticum aestivum cDNA clone E03_e411_plate_12, mRNA
sequence
Length = 550
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 60 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 119
Query: 289 t 289
|
Sbjct: 120 t 120
>gb|AY543536.1| Triticum aestivum expansin EXPB1 mRNA, complete cds
Length = 810
Score = 56.0 bits (28), Expect = 2e-006
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 593 caggtggacctcatggaggccaactccgggacgtggacgccgatgcgcgagtcgtgggga 652
Query: 289 t 289
|
Sbjct: 653 t 653
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 455 ggcatcatcgacatccagtt 474
>gb|BF200271.1|BF200271 WHE2254_H10_P20ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE2254_H10_P20, mRNA
sequence
Length = 600
Score = 54.0 bits (27), Expect = 7e-006
Identities = 67/83 (80%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| |||||||||||| |||| ||||| ||||||||| |||| || ||
Sbjct: 307 caggtggacatgaaggaggccaactcggggtcgtggacgccgatgcgcgagtcctgnggc 366
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 367 tccatctggcggatggactccaa 389
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 169 ggcatcatcgacatccagtt 188
>gb|BG607190.1|BG607190 WHE2472_E02_I04ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2472_E02_I04,
mRNA sequence
Length = 610
Score = 54.0 bits (27), Expect = 7e-006
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 243 ggaggccaactctgggtggtggatgccgatgcgnnagtcgtggggatnnnnctggaggat 302
|||||||||||| |||| ||||| ||||||||| |||| ||||| | |||| ||||
Sbjct: 300 ggaggccaactcggggtcgtggacgccgatgcgcgagtcctggggctccatctggcggat 359
Query: 303 ggactccaa 311
|||||||||
Sbjct: 360 ggactccaa 368
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 148 ggcatcatcgacatccagtt 167
>gb|CD876827.1|CD876827 AZO3.111A15F011010 AZO3 Triticum aestivum cDNA clone AZO3111A15,
mRNA sequence
Length = 770
Score = 54.0 bits (27), Expect = 7e-006
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| |||||||||||| |||| ||||| ||||||||| |||| |||||
Sbjct: 691 caggtggacatgaaggaggccaactccgggtcgtggacgccgatgcgcgagtcctggggc 750
Query: 289 tnnnnctggaggatggactc 308
| |||| ||||||||||
Sbjct: 751 tccatctggcggatggactc 770
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 553 ggcatcatcgacatccagtt 572
>gb|BJ282673.1|BJ282673 BJ282673 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr11l14 3', mRNA sequence
Length = 643
Score = 52.0 bits (26), Expect = 3e-005
Identities = 67/83 (80%)
Strand = Plus / Minus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| ||||||||| || |||| ||||||| | ||||| |||| ||||||
Sbjct: 512 caggtggacatgaaggaggccaagtcggggtcgtggatggccatgcgcgagtcctgggga 453
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 452 tccatctggcggatggactccaa 430
>gb|BJ288382.1|BJ288382 BJ288382 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl14d04 5', mRNA sequence
Length = 596
Score = 52.0 bits (26), Expect = 3e-005
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 242 tggaggccaactctgggtggtggatgccgatgcgnnagtcgtggggat 289
||||||||||||| ||| ||||| ||||||||| ||||||||||||
Sbjct: 288 tggaggccaactccgggacgtggacgccgatgcgcgagtcgtggggat 335
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 137 ggcatcatcgacatccagtt 156
>gb|BJ297065.1|BJ297065 BJ297065 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl19a03 3', mRNA sequence
Length = 479
Score = 52.0 bits (26), Expect = 3e-005
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 242 tggaggccaactctgggtggtggatgccgatgcgnnagtcgtggggat 289
||||||||||||| ||| ||||| ||||||||| ||||||||||||
Sbjct: 474 tggaggccaactccgggacgtggacgccgatgcgcgagtcgtggggat 427
>gb|BJ297327.1|BJ297327 BJ297327 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl20a03 3', mRNA sequence
Length = 458
Score = 52.0 bits (26), Expect = 3e-005
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 242 tggaggccaactctgggtggtggatgccgatgcgnnagtcgtggggat 289
||||||||||||| ||| ||||| ||||||||| ||||||||||||
Sbjct: 453 tggaggccaactccgggacgtggacgccgatgcgcgagtcgtggggat 406
>gb|CK211812.1|CK211812 FGAS023673 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1061
Score = 52.0 bits (26), Expect = 3e-005
Identities = 67/83 (80%)
Strand = Plus / Minus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| ||||||||| || |||| ||||||| | ||||| |||| ||||||
Sbjct: 401 caggtggacatgaaggaggccaagtcggggtcgtggatggccatgcgcgagtcctgggga 342
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 341 tccatctggcggatggactccaa 319
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 539 ggcatcatcgacatccagtt 520
>gb|DR739962.1|DR739962 FGAS000228 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1086
Score = 52.0 bits (26), Expect = 3e-005
Identities = 67/83 (80%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| ||||||||| || |||| ||||||| | ||||| |||| ||||||
Sbjct: 702 caggtggacatgaaggaggccaagtcggggtcgtggatggccatgcgcgagtcctgggga 761
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 762 tccatctggcggatggactccaa 784
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 564 ggcatcatcgacatccagtt 583
>gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, complete cds
Length = 1013
Score = 52.0 bits (26), Expect = 3e-005
Identities = 67/83 (80%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| ||||| |||||| |||| ||||| ||||||||| |||| |||||
Sbjct: 647 caggtggacatgaaggaggtcaactccgggtcgtggacgccgatgcgcgagtcctggggc 706
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 707 tccatctggcggatggactccaa 729
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 509 ggcatcatcgacatccagtt 528
>gb|AJ614162.1|AJ614162 AJ614162 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 09830R, mRNA
sequence
Length = 690
Score = 50.1 bits (25), Expect = 1e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 4 ccagtcgccaagtaccactttgatctcagtggcacggcgtt 44
||||||||||||||||| || || ||||| |||||||||||
Sbjct: 432 ccagtcgccaagtaccatttcgacctcagcggcacggcgtt 472
Score = 40.1 bits (20), Expect = 0.099
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 87 cgccggcatcatcgacatccagtt 110
||||||||| ||||||||||||||
Sbjct: 515 cgccggcattatcgacatccagtt 538
>gb|CV780550.1|CV780550 FGAS074961 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 847
Score = 50.1 bits (25), Expect = 1e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 4 ccagtcgccaagtaccactttgatctcagtggcacggcgtt 44
||||||||||||||||| || || ||||| |||||||||||
Sbjct: 513 ccagtcgccaagtaccatttcgacctcagcggcacggcgtt 553
Score = 40.1 bits (20), Expect = 0.099
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 87 cgccggcatcatcgacatccagtt 110
||||||||| ||||||||||||||
Sbjct: 596 cgccggcattatcgacatccagtt 619
>gb|BJ267460.1|BJ267460 BJ267460 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh11j19 5', mRNA sequence
Length = 531
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 cgccggcatcatcgacatccagtt 110
||||||||||||||||||||||||
Sbjct: 343 cgccggcatcatcgacatccagtt 366
>gb|CA497485.1|CA497485 WHE3228_D10_H20ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3228_D10_H20, mRNA sequence
Length = 637
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 cgccggcatcatcgacatccagtt 110
||||||||||||||||||||||||
Sbjct: 465 cgccggcatcatcgacatccagtt 488
>gb|CD928018.1|CD928018 GR45.103M14F010315 GR45 Triticum aestivum cDNA clone GR45103M14,
mRNA sequence
Length = 701
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 cgccggcatcatcgacatccagtt 110
||||||||||||||||||||||||
Sbjct: 586 cgccggcatcatcgacatccagtt 609
>gb|CB307251.1|CB307251 HFIG236 Hessian fly infested cDNA library Triticum aestivum cDNA,
mRNA sequence
Length = 549
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 cgccggcatcatcgacatccagtt 110
||||||||||||||||||||||||
Sbjct: 183 cgccggcatcatcgacatccagtt 206
>gb|CK207985.1|CK207985 FGAS019660 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1117
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 cgccggcatcatcgacatccagtt 110
||||||||||||||||||||||||
Sbjct: 308 cgccggcatcatcgacatccagtt 331
>gb|AL811840.1|AL811840 AL811840 d:15 Triticum aestivum cDNA clone B02_d15_plate_17, mRNA
sequence
Length = 301
Score = 48.1 bits (24), Expect = 4e-004
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||| | ||||||||||||| ||| ||||| |||||| || |||||||||||
Sbjct: 59 caggtggacctcatggaggccaactccgggacgtggacgccgatacgcgagtcgtgggga 118
Query: 289 t 289
|
Sbjct: 119 t 119
>gb|DR739489.1|DR739489 FGAS084706 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1098
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 cgccggcatcatcgacatccagtt 110
||||||||||||||||||||||||
Sbjct: 626 cgccggcatcatcgacatccagtt 649
>gb|BE426055.1|BE426055 WHE0327_C05_F09ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0327_C05_F09, mRNA
sequence
Length = 556
Score = 46.1 bits (23), Expect = 0.002
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 243 ggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggg 287
|||||||||||| |||| ||||| ||||||||| |||| |||||
Sbjct: 494 ggaggccaactccgggtcgtggacgccgatgcgcgagtcctgggg 538
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 342 ggcatcatcgacatccagtt 361
>gb|BE496838.1|BE496838 WHE0761_F08_L15ZS Wheat heat-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0761_F08_L15, mRNA
sequence
Length = 475
Score = 46.1 bits (23), Expect = 0.002
Identities = 66/83 (79%)
Strand = Plus / Plus
Query: 229 caggtggacatantggaggccaactctgggtggtggatgccgatgcgnnagtcgtgggga 288
||||||||||| ||||||||| || |||| ||||||| | ||||| |||| || |||
Sbjct: 196 caggtggacatgaaggaggccaagtcggggtcgtggatggccatgcgcgagtcctgngga 255
Query: 289 tnnnnctggaggatggactccaa 311
| |||| |||||||||||||
Sbjct: 256 tccatctggcggatggactccaa 278
Score = 40.1 bits (20), Expect = 0.099
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 ggcatcatcgacatccagtt 110
||||||||||||||||||||
Sbjct: 58 ggcatcatcgacatccagtt 77
>gb|BJ246126.1|BJ246126 BJ246126 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf21j15 5', mRNA sequence
Length = 629
Score = 46.1 bits (23), Expect = 0.002
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 10 gccaagtaccactttgatctcagtggcacggcgtt 44
||||||||||| ||||| ||||| |||||||||||
Sbjct: 425 gccaagtaccattttgacctcagcggcacggcgtt 459
Score = 40.1 bits (20), Expect = 0.099
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 87 cgccggcatcatcgacatccagtt 110
||||||||| ||||||||||||||
Sbjct: 502 cgccggcattatcgacatccagtt 525
>gb|BJ279736.1|BJ279736 BJ279736 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr4i03 5', mRNA sequence
Length = 524
Score = 46.1 bits (23), Expect = 0.002
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 87 cgccggcatcatcgacatccagtttaggagg 117
|||||||||||||||||| ||||| ||||||
Sbjct: 481 cgccggcatcatcgacatgcagttcaggagg 511
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 34,447
Number of Sequences: 636343
Number of extensions: 34447
Number of successful extensions: 9207
Number of sequences better than 0.5: 139
Number of HSP's better than 0.5 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8947
Number of HSP's gapped (non-prelim): 258
length of query: 357
length of database: 367,240,239
effective HSP length: 19
effective length of query: 338
effective length of database: 355,149,722
effective search space: 120040606036
effective search space used: 120040606036
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)