BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAN24c09.yg.2.1
(425 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE400684.1|BE400684 AWB006.G03F000328 ITEC AWB Wheat Mei... 149 2e-034
gb|BJ263269.1|BJ263269 BJ263269 Y. Ogihara unpublished cDNA... 149 2e-034
gb|BJ286427.1|BJ286427 BJ286427 Y. Ogihara unpublished cDNA... 149 2e-034
gb|BQ801006.1|BQ801006 WHE2809_C06_E11ZS Triticum monococcu... 147 7e-034
gb|BE430099.1|BE430099 TAS007.A08R990628 ITEC TAS Wheat cDN... 125 3e-027
gb|BJ225906.1|BJ225906 BJ225906 Y. Ogihara unpublished cDNA... 125 3e-027
gb|BJ271750.1|BJ271750 BJ271750 Y. Ogihara unpublished cDNA... 125 3e-027
gb|BJ273002.1|BJ273002 BJ273002 Y. Ogihara unpublished cDNA... 125 3e-027
gb|BJ300299.1|BJ300299 BJ300299 Y. Ogihara unpublished cDNA... 125 3e-027
gb|CA656872.1|CA656872 wlm0.pk0023.e8 wlm0 Triticum aestivu... 125 3e-027
gb|CA656953.1|CA656953 wlm0.pk0033.e10 wlm0 Triticum aestiv... 125 3e-027
gb|CK210842.1|CK210842 FGAS022669 Triticum aestivum FGAS: L... 125 3e-027
gb|AJ612345.1|AJ612345 AJ612345 Triticum turgidum subsp. du... 125 3e-027
gb|CA604192.1|CA604192 wr1.pk0044.f2 wr1 Triticum aestivum ... 121 4e-026
gb|BJ225879.1|BJ225879 BJ225879 Y. Ogihara unpublished cDNA... 119 2e-025
gb|BQ241141.1|BQ241141 TaE05008F11R TaE05 Triticum aestivum... 117 6e-025
gb|BQ247045.1|BQ247045 TaE15002A07R TaE15 Triticum aestivum... 117 6e-025
gb|BJ226173.1|BJ226173 BJ226173 Y. Ogihara unpublished cDNA... 113 1e-023
gb|BJ268088.1|BJ268088 BJ268088 Y. Ogihara unpublished cDNA... 111 4e-023
gb|BJ222681.1|BJ222681 BJ222681 Y. Ogihara unpublished cDNA... 107 6e-022
gb|BJ300509.1|BJ300509 BJ300509 Y. Ogihara unpublished cDNA... 107 6e-022
gb|CV761819.1|CV761819 FGAS056207 Triticum aestivum FGAS: L... 107 6e-022
gb|CA649004.1|CA649004 wre1n.pk0136.d8 wre1n Triticum aesti... 105 2e-021
gb|CD900045.1|CD900045 G174.114F22F010824 G174 Triticum aes... 105 2e-021
gb|AL821781.1|AL821781 AL821781 N:130 Triticum aestivum cDN... 103 1e-020
gb|BE445226.1|BE445226 WHE1133_D10_G19ZS Wheat etiolated se... 92 4e-017
gb|BJ280838.1|BJ280838 BJ280838 Y. Ogihara unpublished cDNA... 92 4e-017
gb|BJ314568.1|BJ314568 BJ314568 Y. Ogihara unpublished cDNA... 92 4e-017
gb|CA500605.1|CA500605 WHE4022_A05_A10ZT Wheat meiotic anth... 92 4e-017
gb|CA604227.1|CA604227 wr1.pk0040.g8 wr1 Triticum aestivum ... 92 4e-017
gb|CA604638.1|CA604638 wr1.pk0042.e9 wr1 Triticum aestivum ... 92 4e-017
gb|CA636912.1|CA636912 wle1n.pk0115.e10 wle1n Triticum aest... 92 4e-017
gb|CD907188.1|CD907188 G468.106D06F010813 G468 Triticum aes... 92 4e-017
gb|CD930401.1|CD930401 GR45.111C19F010418 GR45 Triticum aes... 92 4e-017
gb|CV759597.1|CV759597 FGAS053981 Triticum aestivum FGAS: L... 92 4e-017
gb|DN829292.1|DN829292 KUCD01_08_A08_T3 WSWR cDNA library T... 92 4e-017
gb|DN829505.1|DN829505 KUCD01_06_G02_T3 WSWR cDNA library T... 92 4e-017
gb|BT009438.1| Triticum aestivum clone wlmk4.pk0015.a11:fis... 92 4e-017
gb|BT009583.1| Triticum aestivum clone wre1n.pk0043.h8:fis,... 92 4e-017
dbj|AB158407.1| Triticum aestivum CesA mRNA for putative ce... 92 4e-017
gb|BJ273883.1|BJ273883 BJ273883 Y. Ogihara unpublished cDNA... 86 2e-015
gb|BJ277052.1|BJ277052 BJ277052 Y. Ogihara unpublished cDNA... 86 2e-015
gb|CA600876.1|CA600876 wl1.pk0003.f4 wl1 Triticum aestivum ... 86 2e-015
gb|CV766195.1|CV766195 FGAS060582 Triticum aestivum FGAS: L... 86 2e-015
gb|BJ257382.1|BJ257382 BJ257382 Y. Ogihara unpublished cDNA... 84 9e-015
gb|CK163482.1|CK163482 FGAS016110 Triticum aestivum FGAS: L... 80 1e-013
gb|AJ613930.1|AJ613930 AJ613930 Triticum turgidum subsp. du... 78 5e-013
gb|CV764818.1|CV764818 FGAS059203 Triticum aestivum FGAS: L... 76 2e-012
gb|CV766823.1|CV766823 FGAS061210 Triticum aestivum FGAS: L... 76 2e-012
gb|BJ319137.1|BJ319137 BJ319137 Y. Ogihara unpublished cDNA... 74 9e-012
gb|CA743927.1|CA743927 wri1s.pk006.g7 wri1s Triticum aestiv... 74 9e-012
gb|CD453910.1|CD453910 WHE0903_F03_L05ZT CS wheat 5-15 DAP ... 74 9e-012
gb|CD897450.1|CD897450 G174.105O19F010823 G174 Triticum aes... 74 9e-012
gb|CD898563.1|CD898563 G174.109G12F010824 G174 Triticum aes... 74 9e-012
gb|CD905948.1|CD905948 G468.103H09F010808 G468 Triticum aes... 74 9e-012
gb|DR733934.1|DR733934 FGAS079692 Triticum aestivum FGAS: L... 74 9e-012
gb|CK207368.1|CK207368 FGAS018989 Triticum aestivum FGAS: L... 68 5e-010
gb|CD898564.1|CD898564 G174.109G12R011122 G174 Triticum aes... 66 2e-009
gb|BJ223527.1|BJ223527 BJ223527 Y. Ogihara unpublished cDNA... 64 8e-009
gb|CA641340.1|CA641340 wre1n.pk0043.h8 wre1n Triticum aesti... 64 8e-009
gb|BJ255931.1|BJ255931 BJ255931 Y. Ogihara unpublished cDNA... 62 3e-008
gb|CA644966.1|CA644966 wre1n.pk0085.f12 wre1n Triticum aest... 62 3e-008
gb|CV768777.1|CV768777 FGAS063168 Triticum aestivum FGAS: L... 62 3e-008
gb|CV769776.1|CV769776 FGAS064168 Triticum aestivum FGAS: L... 62 3e-008
gb|CV777304.1|CV777304 FGAS071709 Triticum aestivum FGAS: L... 62 3e-008
gb|CA633910.1|CA633910 wle1n.pk0080.d11 wle1n Triticum aest... 60 1e-007
gb|BJ230234.1|BJ230234 BJ230234 Y. Ogihara unpublished cDNA... 56 2e-006
gb|CV765988.1|CV765988 FGAS060375 Triticum aestivum FGAS: L... 56 2e-006
gb|CV767146.1|CV767146 FGAS061533 Triticum aestivum FGAS: L... 56 2e-006
gb|CN009761.1|CN009761 WHE3862_D09_H18ZS Wheat Fusarium gra... 54 8e-006
gb|CV768350.1|CV768350 FGAS062741 Triticum aestivum FGAS: L... 54 8e-006
gb|BJ261460.1|BJ261460 BJ261460 Y. Ogihara unpublished cDNA... 52 3e-005
gb|BJ269994.1|BJ269994 BJ269994 Y. Ogihara unpublished cDNA... 52 3e-005
gb|CA610863.1|CA610863 wr1.pk0124.f10 wr1 Triticum aestivum... 52 3e-005
gb|CD897011.1|CD897011 G174.104J04F010823 G174 Triticum aes... 52 3e-005
gb|AL828184.1|AL828184 AL828184 p:436 Triticum aestivum cDN... 48 5e-004
gb|AL829321.1|AL829321 AL829321 q:141 Triticum aestivum cDN... 48 5e-004
gb|CD905949.1|CD905949 G468.103H09R010929 G468 Triticum aes... 48 5e-004
gb|CK164582.1|CK164582 FGAS048496 Triticum aestivum FGAS: T... 48 5e-004
gb|CD886934.1|CD886934 G118.103L14F010605 G118 Triticum aes... 46 0.002
gb|BQ805050.1|BQ805050 WHE3562_C03_F06ZS Wheat developing g... 44 0.008
gb|CD930234.1|CD930234 GR45.110L03F010511 GR45 Triticum aes... 44 0.008
gb|CK197922.1|CK197922 FGAS006402 Triticum aestivum FGAS: L... 44 0.008
gb|CV769884.1|CV769884 FGAS064276 Triticum aestivum FGAS: L... 44 0.008
gb|BE470727.1|BE470727 WHE0279_F10_K19ZS Wheat drought-stre... 42 0.030
gb|BG607364.1|BG607364 WHE2471_F12_K23ZS Triticum monococcu... 42 0.030
gb|BQ237973.1|BQ237973 TaE05009H10F TaE05 Triticum aestivum... 42 0.030
gb|BQ743340.1|BQ743340 WHE4102_H02_O04ZS Wheat salt-stresse... 42 0.030
gb|BQ753218.1|BQ753218 WHE4124_D10_H20ZS Wheat salt-stresse... 42 0.030
gb|CA627337.1|CA627337 wl1n.pk0116.g9 wl1n Triticum aestivu... 42 0.030
gb|CA641831.1|CA641831 wre1n.pk0050.d5 wre1n Triticum aesti... 42 0.030
gb|CD878488.1|CD878488 AZO4.102O04F010930 AZO4 Triticum aes... 42 0.030
gb|CD885769.1|CD885769 G118.100G10F010423 G118 Triticum aes... 42 0.030
gb|CD903325.1|CD903325 G356.110A04F010919 G356 Triticum aes... 42 0.030
gb|CD904172.1|CD904172 G356.112K17F010919 G356 Triticum aes... 42 0.030
gb|CD929631.1|CD929631 GR45.108L13F010413 GR45 Triticum aes... 42 0.030
gb|CD929632.1|CD929632 GR45.108L13R010612 GR45 Triticum aes... 42 0.030
gb|CD938838.1|CD938838 OV.111D10R010412 OV Triticum aestivu... 42 0.030
gb|CK155617.1|CK155617 FGAS036456 Triticum aestivum FGAS: T... 42 0.030
gb|CK195305.1|CK195305 FGAS003744 Triticum aestivum FGAS: L... 42 0.030
emb|AX756302.1| Sequence 1041 from Patent WO03000905 42 0.030
gb|BE500743.1|BE500743 WHE0991-0994_C05_C05ZS Wheat pre-ant... 40 0.12
gb|BG607647.1|BG607647 WHE2481_E11_J21ZS Triticum monococcu... 40 0.12
gb|BI751378.1|BI751378 Ta01_16h11_R Ta01_AAFC_ECORC_Fusariu... 40 0.12
gb|BJ264884.1|BJ264884 BJ264884 Y. Ogihara unpublished cDNA... 40 0.12
gb|CA497841.1|CA497841 WHE3232_H03_P06ZT Wheat meiotic anth... 40 0.12
gb|CA595818.1|CA595818 wpa1c.pk011.l24 wpa1c Triticum aesti... 40 0.12
gb|CA745290.1|CA745290 wri1s.pk003.g17 wri1s Triticum aesti... 40 0.12
gb|CA745636.1|CA745636 wri2s.pk002.g11 wri2s Triticum aesti... 40 0.12
gb|CA747274.1|CA747274 wri2s.pk008.h9.f wri2s Triticum aest... 40 0.12
gb|CD878489.1|CD878489 AZO4.102O04R011126 AZO4 Triticum aes... 40 0.12
gb|BJ257238.1|BJ257238 BJ257238 Y. Ogihara unpublished cDNA... 38 0.47
gb|CA734875.1|CA734875 wpi1s.pk002.k20 wpi1s Triticum aesti... 38 0.47
gb|CA734955.1|CA734955 wpi1s.pk003.i11 wpi1s Triticum aesti... 38 0.47
gb|CA737066.1|CA737066 wpi1s.pk009.f9 wpi1s Triticum aestiv... 38 0.47
gb|CA742576.1|CA742576 wri1s.pk001.h10 wri1s Triticum aesti... 38 0.47
gb|CA742719.1|CA742719 wri1s.pk001.p9 wri1s Triticum aestiv... 38 0.47
gb|CA742742.1|CA742742 wri1s.pk004.n19 wri1s Triticum aesti... 38 0.47
gb|CA743055.1|CA743055 wri1s.pk002.p6 wri1s Triticum aestiv... 38 0.47
gb|CA744488.1|CA744488 wri1s.pk007.b24 wri1s Triticum aesti... 38 0.47
gb|CA745183.1|CA745183 wri1s.pk003.f20 wri1s Triticum aesti... 38 0.47
gb|CA746797.1|CA746797 wri2s.pk006.e14 wri2s Triticum aesti... 38 0.47
gb|AJ602799.1|AJ602799 AJ602799 T06 Triticum aestivum cDNA ... 38 0.47
gb|AJ603373.1|AJ603373 AJ603373 T06 Triticum aestivum cDNA ... 38 0.47
gb|CV523146.1|CV523146 LP-242 Triticum aestivum subtracted,... 38 0.47
>gb|BE400684.1|BE400684 AWB006.G03F000328 ITEC AWB Wheat Meiotic Stage Library Triticum
aestivum cDNA clone AWB006.G03, mRNA sequence
Length = 443
Score = 149 bits (75), Expect = 2e-034
Identities = 190/231 (82%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||||||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 180 tggtacatgtcacttttcatctgcatttttgctacgggtattctggaaatgagatgggct 239
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 240 cgtgtcgcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtctct 299
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagc 354
| || ||||| || ||||| || ||||||||| ||| ||||||||||| || ||||||
Sbjct: 300 gcccatctctttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacaagc 359
Query: 355 tncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
| ||| ||| |||||| |||||||||||| || ||||| || ||||||
Sbjct: 360 ttcaccgtcacaacaaaggctggagatgatgaggagttctcggaactgtac 410
>gb|BJ263269.1|BJ263269 BJ263269 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh13l09 3', mRNA sequence
Length = 737
Score = 149 bits (75), Expect = 2e-034
Identities = 190/231 (82%)
Strand = Plus / Minus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||||||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 694 tggtacatgtcacttttcatctgcatttttgctacgggtattctggaaatgagatgggct 635
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 634 cgtgtcgcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtctct 575
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagc 354
| || ||||| || ||||| || ||||||||| ||| ||||||||||| || ||||||
Sbjct: 574 gcccatctctttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacaagc 515
Query: 355 tncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
| ||| ||| |||||| |||||||||||| || ||||| || ||||||
Sbjct: 514 ttcaccgtcacaacaaaggctggagatgatgaggagttctcggaactgtac 464
>gb|BJ286427.1|BJ286427 BJ286427 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr21k18 3', mRNA sequence
Length = 712
Score = 149 bits (75), Expect = 2e-034
Identities = 190/231 (82%)
Strand = Plus / Minus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||||||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 702 tggtacatgtcacttttcatctgcatttttgctacgggtattctggaaatgagatgggct 643
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 642 cgtgtcgcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtctct 583
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagc 354
| || ||||| || ||||| || ||||||||| ||| ||||||||||| || ||||||
Sbjct: 582 gcccatctctttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacaagc 523
Query: 355 tncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
| ||| ||| |||||| |||||||||||| || ||||| || ||||||
Sbjct: 522 ttcaccgtcacaacaaaggctggagatgatgaggagttctcggaactgtac 472
>gb|BQ801006.1|BQ801006 WHE2809_C06_E11ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2809_C06_E11, mRNA
sequence
Length = 756
Score = 147 bits (74), Expect = 7e-034
Identities = 186/226 (82%)
Strand = Plus / Plus
Query: 180 catgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagtggtgt 239
|||||||||||| ||||||||||||||||| | || || |||||||||| | ||||
Sbjct: 18 catgtcacttttcatctgcatttttgctacgggtattctggaaatgagatgggctcgtgt 77
Query: 240 tgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcctcgca 299
| | |||| ||||||||||||||||||||||||||||||||||||||||| || | ||
Sbjct: 78 cgcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtctctgccca 137
Query: 300 cctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagctncac 359
||||| || ||||| || ||||||||| ||| ||||||||||| || ||||||| |||
Sbjct: 138 tctctttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacaagcttcac 197
Query: 360 tnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
||| |||||| |||||||||||| || ||||| || ||||||
Sbjct: 198 cgtcacaacaaaggctggagatgatgaggagttctcggaactgtac 243
>gb|BE430099.1|BE430099 TAS007.A08R990628 ITEC TAS Wheat cDNA Library Triticum aestivum
cDNA clone TAS007.A08, mRNA sequence
Length = 526
Score = 125 bits (63), Expect = 3e-027
Identities = 187/231 (80%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 172 tggtacatgtcgcttttcatctgcatttttgctacgggtattctggaaatgagatgggct 231
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 232 cgtgtagcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtctct 291
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagc 354
| || ||||| || ||||| || ||||||||| ||| ||||||||||| || |||||
Sbjct: 292 gcccatctctttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacaagt 351
Query: 355 tncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
| ||| ||| |||||| |||||| ||||| || || || |||||||||
Sbjct: 352 ttcaccgtcacaacaaaggctggagacgatgaggagttttcggagctgtac 402
>gb|BJ225906.1|BJ225906 BJ225906 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl24f16 5', mRNA sequence
Length = 662
Score = 125 bits (63), Expect = 3e-027
Identities = 187/231 (80%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 155 tggtacatgtctcttttcatctgcatttttgctactggtattctggaaatgagatgggct 214
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 215 cgtgtagcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtatct 274
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagc 354
| || || || || ||||| || ||||||||| ||| ||||||||||| || || |||
Sbjct: 275 gcccatctgtttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacgagc 334
Query: 355 tncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
| ||| ||| |||||| |||||| ||||| || ||||| |||||||||
Sbjct: 335 ttcaccgtcacaacaaaggctggagacgatgaggagttctcggagctgtac 385
>gb|BJ271750.1|BJ271750 BJ271750 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh27f14 5', mRNA sequence
Length = 624
Score = 125 bits (63), Expect = 3e-027
Identities = 187/231 (80%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 22 tggtacatgtcgcttttcatctgcatttttgctacgggtattctggaaatgagatgggct 81
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 82 cgtgtagcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtctct 141
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagc 354
| || ||||| || ||||| || ||||||||| ||| ||||||||||| || |||||
Sbjct: 142 gcccatctctttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacaagt 201
Query: 355 tncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
| ||| ||| |||||| |||||| ||||| || || || |||||||||
Sbjct: 202 ttcaccgtcacaacaaaggctggagacgatgaggagttttcggagctgtac 252
>gb|BJ273002.1|BJ273002 BJ273002 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh15a22 3', mRNA sequence
Length = 740
Score = 125 bits (63), Expect = 3e-027
Identities = 187/231 (80%)
Strand = Plus / Minus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 704 tggtacatgtctcttttcatctgcatttttgctactggtattctggaaatgagatgggct 645
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 644 cgtgtagcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtatct 585
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagc 354
| || || || || ||||| || ||||||||| ||| ||||||||||| || || |||
Sbjct: 584 gcccatctgtttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacgagc 525
Query: 355 tncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
| ||| ||| |||||| |||||| ||||| || ||||| |||||||||
Sbjct: 524 ttcaccgtcacaacaaaggctggagacgatgaggagttctcggagctgtac 474
>gb|BJ300299.1|BJ300299 BJ300299 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd1h18 5', mRNA sequence
Length = 622
Score = 125 bits (63), Expect = 3e-027
Identities = 187/231 (80%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 247 tggtacatgtctcttttcatctgcatttttgctactggtattctggaaatgagatgggct 306
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 307 cgtgtagcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtatct 366
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagc 354
| || || || || ||||| || ||||||||| ||| ||||||||||| || || |||
Sbjct: 367 gcccatctgtttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacgagc 426
Query: 355 tncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
| ||| ||| |||||| |||||| ||||| || ||||| |||||||||
Sbjct: 427 ttcaccgtcacaacaaaggctggagacgatgaggagttctcggagctgtac 477
>gb|CA656872.1|CA656872 wlm0.pk0023.e8 wlm0 Triticum aestivum cDNA clone wlm0.pk0023.e8 5'
end, mRNA sequence
Length = 500
Score = 125 bits (63), Expect = 3e-027
Identities = 187/231 (80%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 27 tggtacatgtcgcttttcatctgcatttttgctacgggtattctggaaatgagatgggct 86
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 87 cgtgtagcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtctct 146
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagc 354
| || ||||| || ||||| || ||||||||| ||| ||||||||||| || |||||
Sbjct: 147 gcccatctctttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacaagt 206
Query: 355 tncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
| ||| ||| |||||| |||||| ||||| || || || |||||||||
Sbjct: 207 ttcaccgtcacaacaaaggctggagacgatgaggagttttcggagctgtac 257
>gb|CA656953.1|CA656953 wlm0.pk0033.e10 wlm0 Triticum aestivum cDNA clone wlm0.pk0033.e10
5' end, mRNA sequence
Length = 490
Score = 125 bits (63), Expect = 3e-027
Identities = 187/231 (80%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 27 tggtacatgtcgcttttcatctgcatttttgctacgggtattctggaaatgagatgggct 86
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 87 cgtgtagcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtctct 146
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagc 354
| || ||||| || ||||| || ||||||||| ||| ||||||||||| || |||||
Sbjct: 147 gcccatctctttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacaagt 206
Query: 355 tncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
| ||| ||| |||||| |||||| ||||| || || || |||||||||
Sbjct: 207 ttcaccgtcacaacaaaggctggagacgatgaggagttttcggagctgtac 257
>gb|CK210842.1|CK210842 FGAS022669 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1195
Score = 125 bits (63), Expect = 3e-027
Identities = 187/231 (80%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 64 tggtacatgtctcttttcatctgcatttttgctactggtattctggaaatgagatgggct 123
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 124 cgtgtagcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtatct 183
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagc 354
| || || || || ||||| || ||||||||| ||| ||||||||||| || || |||
Sbjct: 184 gcccatctgtttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacgagc 243
Query: 355 tncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
| ||| ||| |||||| |||||| ||||| || ||||| |||||||||
Sbjct: 244 ttcaccgtcacaacaaaggctggagacgatgaggagttctcggagctgtac 294
>gb|AJ612345.1|AJ612345 AJ612345 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 06584R, mRNA
sequence
Length = 814
Score = 125 bits (63), Expect = 3e-027
Identities = 187/231 (80%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 203 tggtacatgtctcttttcatctgcatttttgctactggtattctggaaatgagatgggct 262
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 263 cgtgtagcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtatct 322
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagc 354
| || || || || ||||| || ||||||||| ||| ||||||||||| || || |||
Sbjct: 323 gcccatctgtttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacgagc 382
Query: 355 tncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
| ||| ||| |||||| |||||| ||||| || ||||| |||||||||
Sbjct: 383 ttcaccgtcacaacaaaggctggagacgatgaggagttctcggagctgtac 433
>gb|CA604192.1|CA604192 wr1.pk0044.f2 wr1 Triticum aestivum cDNA clone wr1.pk0044.f2 5'
end, mRNA sequence
Length = 726
Score = 121 bits (61), Expect = 4e-026
Identities = 174/213 (81%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||||||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 194 tggtacatgtcacttttcatctgcatttttgctacgggtattctggaaatgagatgggct 253
Query: 235 ggtgttgggattgatgatt-ggtggaggaatgagcagttctgggtcattggaggtgtgtc 293
|||| | | |||| |||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 254 cgtgtcgcggttgacgattgggtggaggaatgagcagttctgggtcattggaggtgtctc 313
Query: 294 ctcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaag 353
| || ||||| || ||||| || ||||||||| ||| ||| ||||||| || |||||
Sbjct: 314 tgcccatctctttgccgtgttccaaggacttctcaaggtgataactggtgtggacacaag 373
Query: 354 ctncactnngacatcaaagggtggagatgatga 386
|| ||| ||| |||||| ||||||||||||
Sbjct: 374 cttcaccgtcacaacaaaggctggagatgatga 406
>gb|BJ225879.1|BJ225879 BJ225879 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl24d16 5', mRNA sequence
Length = 427
Score = 119 bits (60), Expect = 2e-025
Identities = 186/231 (80%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 142 tggtacatgtctcttttcatctgcatttttgctactggtattctggaaatgagatgggct 201
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 202 cgtgtagcggntgacgattggtggaggaatgagcagttctgggtcattggaggtgtatct 261
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagc 354
| || || || || ||||| || ||||||||| ||| ||||||||||| || || |||
Sbjct: 262 gcccatctgtttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacgagc 321
Query: 355 tncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
| ||| ||| |||||| |||||| ||||| || ||||| |||||||||
Sbjct: 322 ttcaccgtcacaacaaaggctggagacgatgaggagttctcggagctgtac 372
>gb|BQ241141.1|BQ241141 TaE05008F11R TaE05 Triticum aestivum cDNA clone TaE05008F11R, mRNA
sequence
Length = 646
Score = 117 bits (59), Expect = 6e-025
Identities = 177/219 (80%)
Strand = Plus / Plus
Query: 187 ctttttatctgcatttttgctacaagcatcctnnnaatgagatggagtggtgttgggatt 246
||||| ||||||||||||||||| | || || |||||||||| | |||| | | ||
Sbjct: 14 cttttcatctgcatttttgctactggtattctggaaatgagatgggctcgtgtagcggtt 73
Query: 247 gatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcctcgcacctcttc 306
|| ||||||||||||||||||||||||||||||||||||||||| || | || || ||
Sbjct: 74 gacgattggtggaggaatgagcagttctgggtcattggaggtgtatctgcccatctgttt 133
Query: 307 gctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagctncactnngaca 366
|| ||||| || ||||||||| ||| ||||||||||| || || |||| ||| |||
Sbjct: 134 gccgtgttccaaggacttctcaaggtgatagctggtgtggacacgagcttcaccgtcaca 193
Query: 367 tcaaagggtggagatgatgacgaattctcagagctgtac 405
|||||| |||||| ||||| || ||||| |||||||||
Sbjct: 194 acaaaggctggagacgatgaggagttctcggagctgtac 232
>gb|BQ247045.1|BQ247045 TaE15002A07R TaE15 Triticum aestivum cDNA clone TaE15002A07R, mRNA
sequence
Length = 668
Score = 117 bits (59), Expect = 6e-025
Identities = 171/211 (81%)
Strand = Plus / Plus
Query: 195 ctgcatttttgctacaagcatcctnnnaatgagatggagtggtgttgggattgatgattg 254
||||||||||||||| | || || |||||||||| |||||| | | |||| |||||
Sbjct: 1 ctgcatttttgctacgggtattctggaaatgagatgggctggtgtagcggttgacgattg 60
Query: 255 gtggaggaatgagcagttctgggtcattggaggtgtgtcctcgcacctcttcgctgtgtt 314
|||||||||||||||||||||||||||||||||||| || | || ||||| || |||||
Sbjct: 61 gtggaggaatgagcagttctgggtcattggaggtgtctctgcccatctctttgccgtgtt 120
Query: 315 tcagggacttctcnnggtcatagctggtgttgatacaagctncactnngacatcaaaggg 374
|| ||||||||| ||| ||||||||||| || ||||| | ||| ||| ||||||
Sbjct: 121 ccaaggacttctcaaggtgatagctggtgtggacacaagtttcaccgtcacaacaaaggc 180
Query: 375 tggagatgatgacgaattctcagagctgtac 405
|||||| ||||| || || || |||||||||
Sbjct: 181 tggagacgatgaggagttttcggagctgtac 211
>gb|BJ226173.1|BJ226173 BJ226173 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl25f16 5', mRNA sequence
Length = 337
Score = 113 bits (57), Expect = 1e-023
Identities = 185/231 (80%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 42 tggtacatgtctcttttcatctgcatttttgctactggtattctggaaatgagatgggct 101
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 102 cgtgtagcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtatct 161
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagc 354
| || || || || ||||| || ||||||||| ||| |||||||| || || || |||
Sbjct: 162 gcccatctgtttgccgtgttccaaggacttctcaaggtgatagctggngtggacacgagc 221
Query: 355 tncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
| ||| ||| |||||| |||||| |||| || ||||| |||||||||
Sbjct: 222 ttcaccgtcacaacaaaggctggagacnatgaggagttctcggagctgtac 272
>gb|BJ268088.1|BJ268088 BJ268088 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh15a22 5', mRNA sequence
Length = 618
Score = 111 bits (56), Expect = 4e-023
Identities = 187/232 (80%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 334 tggtacatgtctcttttcatctgcatttttgctactggtattctggaaatgagatgggct 393
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcc 294
|||| | | |||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 394 cgtgtagcggttgacgattggtggaggaatgagcagttctgggtcattggaggtgtatct 453
Query: 295 tcgcacctcttcgctgtgtttcagggacttctcnnggtcatagc-tggtgttgatacaag 353
| || || || || ||||| || ||||||||| ||| ||||| |||||| || || ||
Sbjct: 454 gcccatctgtttgccgtgttccaaggacttctcaaggtgatagcntggtgtggacacgag 513
Query: 354 ctncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
|| ||| ||| |||||| |||||| ||||| || ||||| |||||||||
Sbjct: 514 cttcaccgtcacaacaaaggctggagacgatgaggagttctcggagctgtac 565
>gb|BJ222681.1|BJ222681 BJ222681 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl15e05 5', mRNA sequence
Length = 558
Score = 107 bits (54), Expect = 6e-022
Identities = 133/161 (82%)
Strand = Plus / Plus
Query: 245 ttgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcctcgcacctct 304
|||| ||||||||||||||||||||||||||||||||||||||||| || | || ||||
Sbjct: 30 ttgacgattggtggaggaatgagcagttctgggtcattggaggtgtctctgcccatctct 89
Query: 305 tcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagctncactnnga 364
| || ||||| || ||||||||| ||| ||||||||||| || ||||| | ||| |
Sbjct: 90 ttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacaagtttcaccgtca 149
Query: 365 catcaaagggtggagatgatgacgaattctcagagctgtac 405
|| |||||| |||||| ||||| || || || |||||||||
Sbjct: 150 caacaaaggctggagacgatgaggagttttcggagctgtac 190
>gb|BJ300509.1|BJ300509 BJ300509 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd2l02 5', mRNA sequence
Length = 583
Score = 107 bits (54), Expect = 6e-022
Identities = 133/161 (82%)
Strand = Plus / Plus
Query: 245 ttgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcctcgcacctct 304
|||| ||||||||||||||||||||||||||||||||||||||||| || | || ||||
Sbjct: 42 ttgacgattggtggaggaatgagcagttctgggtcattggaggtgtctctgcccatctct 101
Query: 305 tcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagctncactnnga 364
| || ||||| || ||||||||| ||| ||||||||||| || ||||| | ||| |
Sbjct: 102 ttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacaagtttcaccgtca 161
Query: 365 catcaaagggtggagatgatgacgaattctcagagctgtac 405
|| |||||| |||||| ||||| || || || |||||||||
Sbjct: 162 caacaaaggctggagacgatgaggagttttcggagctgtac 202
>gb|CV761819.1|CV761819 FGAS056207 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 820
Score = 107 bits (54), Expect = 6e-022
Identities = 133/161 (82%)
Strand = Plus / Plus
Query: 245 ttgatgattggtggaggaatgagcagttctgggtcattggaggtgtgtcctcgcacctct 304
|||| ||||||||||||||||||||||||||||||||||||||||| || | || || |
Sbjct: 123 ttgacgattggtggaggaatgagcagttctgggtcattggaggtgtatctgcccatctgt 182
Query: 305 tcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaagctncactnnga 364
| || ||||| || ||||||||| ||| ||||||||||| || || |||| ||| |
Sbjct: 183 ttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacgagcttcaccgtca 242
Query: 365 catcaaagggtggagatgatgacgaattctcagagctgtac 405
|| |||||| |||||| ||||| || ||||| |||||||||
Sbjct: 243 caacaaaggctggagacgatgaggagttctcggagctgtac 283
>gb|CA649004.1|CA649004 wre1n.pk0136.d8 wre1n Triticum aestivum cDNA clone wre1n.pk0136.d8
5' end, mRNA sequence
Length = 596
Score = 105 bits (53), Expect = 2e-021
Identities = 148/180 (82%), Gaps = 1/180 (0%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 109 tggtacatgtcgcttttcatctgcatttttgctacgggtattctggaaatgagatgggct 168
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattg-gaggtgtgtc 293
|||| | | |||| |||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 169 cgtgtagcggttgacgattggtggaggaatgagcagttctgggtcattgngaggtgtctc 228
Query: 294 ctcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaag 353
| || ||||| || ||||| || ||||||||| ||| ||||||||||| || |||||
Sbjct: 229 tgcccatctctttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacaag 288
>gb|CD900045.1|CD900045 G174.114F22F010824 G174 Triticum aestivum cDNA clone G174114F22,
mRNA sequence
Length = 694
Score = 105 bits (53), Expect = 2e-021
Identities = 98/114 (85%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | ||||| |||||||||| |
Sbjct: 557 tggtacatgtctcttttcatctgcatttttgctactggtatcctggaaatgagatgggct 616
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggt 288
|||| | | |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cgtgtagcggttgacgattggtggaggaatgagcagttctgggtcattggaggt 670
>gb|AL821781.1|AL821781 AL821781 N:130 Triticum aestivum cDNA clone B04_N130_plate_41, mRNA
sequence
Length = 744
Score = 103 bits (52), Expect = 1e-020
Identities = 186/232 (80%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 163 tggtacatgtctcttttcatctgcatttttgctactggtattctggaaatgagatgggct 222
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtc-attggaggtgtgtc 293
|||| | | |||| |||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 223 cgtgtagcggttgacgattggtggaggaatgagcagttctgggtctgttggaggtgtatc 282
Query: 294 ctcgcacctcttcgctgtgtttcagggacttctcnnggtcatagctggtgttgatacaag 353
| || || || || ||||| || ||||||||| ||| ||||||||||| || || ||
Sbjct: 283 tgcccatctgtttgccgtgttccaaggacttctcaaggtgatagctggtgtggacacgag 342
Query: 354 ctncactnngacatcaaagggtggagatgatgacgaattctcagagctgtac 405
|| ||| ||| |||||| |||||| ||||| || ||||| |||||||||
Sbjct: 343 cttcaccgtcacaacaaaggctggagacgatgaggagttctcggagctgtac 394
>gb|BE445226.1|BE445226 WHE1133_D10_G19ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1133_D10_G19,
mRNA sequence
Length = 535
Score = 91.7 bits (46), Expect = 4e-017
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||
Sbjct: 176 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 235
Query: 283 ggaggt 288
||||||
Sbjct: 236 ggaggt 241
>gb|BJ280838.1|BJ280838 BJ280838 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr19e24 5', mRNA sequence
Length = 634
Score = 91.7 bits (46), Expect = 4e-017
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||
Sbjct: 63 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 122
Query: 283 ggaggt 288
||||||
Sbjct: 123 ggaggt 128
>gb|BJ314568.1|BJ314568 BJ314568 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf13e17 5', mRNA sequence
Length = 625
Score = 91.7 bits (46), Expect = 4e-017
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||
Sbjct: 359 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 418
Query: 283 ggaggt 288
||||||
Sbjct: 419 ggaggt 424
>gb|CA500605.1|CA500605 WHE4022_A05_A10ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4022_A05_A10, mRNA sequence
Length = 646
Score = 91.7 bits (46), Expect = 4e-017
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||
Sbjct: 404 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 463
Query: 283 ggaggt 288
||||||
Sbjct: 464 ggaggt 469
>gb|CA604227.1|CA604227 wr1.pk0040.g8 wr1 Triticum aestivum cDNA clone wr1.pk0040.g8 5'
end, mRNA sequence
Length = 647
Score = 91.7 bits (46), Expect = 4e-017
Identities = 116/141 (82%)
Strand = Plus / Plus
Query: 265 gagcagttctgggtcattggaggtgtgtcctcgcacctcttcgctgtgtttcagggactt 324
|||||||||||||||||||||||||| || | || ||||| || ||||| || ||||||
Sbjct: 1 gagcagttctgggtcattggaggtgtctctgcccatctctttgccgtgttccaaggactt 60
Query: 325 ctcnnggtcatagctggtgttgatacaagctncactnngacatcaaagggtggagatgat 384
||| ||| ||||||||||| || ||||||| ||| ||| |||||| ||||||||||
Sbjct: 61 ctcaaggtgatagctggtgtggacacaagcttcaccgtcacaacaaaggctggagatgat 120
Query: 385 gacgaattctcagagctgtac 405
|| || ||||| || ||||||
Sbjct: 121 gaggagttctcggaactgtac 141
>gb|CA604638.1|CA604638 wr1.pk0042.e9 wr1 Triticum aestivum cDNA clone wr1.pk0042.e9 5'
end, mRNA sequence
Length = 704
Score = 91.7 bits (46), Expect = 4e-017
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||
Sbjct: 149 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 208
Query: 283 ggaggt 288
||||||
Sbjct: 209 ggaggt 214
>gb|CA636912.1|CA636912 wle1n.pk0115.e10 wle1n Triticum aestivum cDNA clone
wle1n.pk0115.e10 5' end, mRNA sequence
Length = 448
Score = 91.7 bits (46), Expect = 4e-017
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||
Sbjct: 30 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 89
Query: 283 ggaggt 288
||||||
Sbjct: 90 ggaggt 95
>gb|CD907188.1|CD907188 G468.106D06F010813 G468 Triticum aestivum cDNA clone G468106D06,
mRNA sequence
Length = 702
Score = 91.7 bits (46), Expect = 4e-017
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||
Sbjct: 567 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 626
Query: 283 ggaggt 288
||||||
Sbjct: 627 ggaggt 632
>gb|CD930401.1|CD930401 GR45.111C19F010418 GR45 Triticum aestivum cDNA clone GR45111C19,
mRNA sequence
Length = 701
Score = 91.7 bits (46), Expect = 4e-017
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||
Sbjct: 464 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 523
Query: 283 ggaggt 288
||||||
Sbjct: 524 ggaggt 529
>gb|CV759597.1|CV759597 FGAS053981 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 810
Score = 91.7 bits (46), Expect = 4e-017
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||
Sbjct: 232 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 291
Query: 283 ggaggt 288
||||||
Sbjct: 292 ggaggt 297
>gb|DN829292.1|DN829292 KUCD01_08_A08_T3 WSWR cDNA library Triticum aestivum cDNA, mRNA
sequence
Length = 895
Score = 91.7 bits (46), Expect = 4e-017
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||
Sbjct: 234 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 293
Query: 283 ggaggt 288
||||||
Sbjct: 294 ggaggt 299
>gb|DN829505.1|DN829505 KUCD01_06_G02_T3 WSWR cDNA library Triticum aestivum cDNA, mRNA
sequence
Length = 939
Score = 91.7 bits (46), Expect = 4e-017
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||
Sbjct: 233 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 292
Query: 283 ggaggt 288
||||||
Sbjct: 293 ggaggt 298
>gb|BT009438.1| Triticum aestivum clone wlmk4.pk0015.a11:fis, full insert mRNA
sequence
Length = 3626
Score = 91.7 bits (46), Expect = 4e-017
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||
Sbjct: 2787 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 2846
Query: 283 ggaggt 288
||||||
Sbjct: 2847 ggaggt 2852
>gb|BT009583.1| Triticum aestivum clone wre1n.pk0043.h8:fis, full insert mRNA
sequence
Length = 993
Score = 91.7 bits (46), Expect = 4e-017
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||
Sbjct: 266 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 325
Query: 283 ggaggt 288
||||||
Sbjct: 326 ggaggt 331
>dbj|AB158407.1| Triticum aestivum CesA mRNA for putative cellulose synthase, complete
cds
Length = 3681
Score = 91.7 bits (46), Expect = 4e-017
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||
Sbjct: 2813 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 2872
Query: 283 ggaggt 288
||||||
Sbjct: 2873 ggaggt 2878
>gb|BJ273883.1|BJ273883 BJ273883 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh19j11 3', mRNA sequence
Length = 687
Score = 85.7 bits (43), Expect = 2e-015
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 260 ggaatgagcagttctgggtcattggaggtgtgtcctcgcacctcttcgctgtgtttcagg 319
||||||||||||||||||||||||||||||| || | || || || || ||||| || |
Sbjct: 606 ggaatgagcagttctgggtcattggaggtgtatctgcccatctgtttgccgtgttccaag 547
Query: 320 gacttctcnnggtcatagctggtgttgatacaagctncactnngacatcaaagggtggag 379
|||||||| ||| ||||||||||| || || |||| ||| ||| |||||| |||||
Sbjct: 546 gacttctcaaggtgatagctggtgtggacacgagcttcaccgtcacaacaaaggctggag 487
Query: 380 atgatgacgaattctcagagctgtac 405
| ||||| || ||||| |||||||||
Sbjct: 486 acgatgaggagttctcggagctgtac 461
>gb|BJ277052.1|BJ277052 BJ277052 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh27k15 3', mRNA sequence
Length = 698
Score = 85.7 bits (43), Expect = 2e-015
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 260 ggaatgagcagttctgggtcattggaggtgtgtcctcgcacctcttcgctgtgtttcagg 319
||||||||||||||||||||||||||||||| || | || || || || ||||| || |
Sbjct: 611 ggaatgagcagttctgggtcattggaggtgtatctgcccatctgtttgccgtgttccaag 552
Query: 320 gacttctcnnggtcatagctggtgttgatacaagctncactnngacatcaaagggtggag 379
|||||||| ||| ||||||||||| || || |||| ||| ||| |||||| |||||
Sbjct: 551 gacttctcaaggtgatagctggtgtggacacgagcttcaccgtcacaacaaaggctggag 492
Query: 380 atgatgacgaattctcagagctgtac 405
| ||||| || ||||| |||||||||
Sbjct: 491 acgatgaggagttctcggagctgtac 466
>gb|CA600876.1|CA600876 wl1.pk0003.f4 wl1 Triticum aestivum cDNA clone wl1.pk0003.f4 5'
end, mRNA sequence
Length = 395
Score = 85.7 bits (43), Expect = 2e-015
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 230 ggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggt 288
||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 208 ggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 266
>gb|CV766195.1|CV766195 FGAS060582 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 820
Score = 85.7 bits (43), Expect = 2e-015
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 230 ggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggt 288
||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 761 ggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 819
>gb|BJ257382.1|BJ257382 BJ257382 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh10e04 5', mRNA sequence
Length = 677
Score = 83.8 bits (42), Expect = 9e-015
Identities = 118/145 (81%)
Strand = Plus / Plus
Query: 261 gaatgagcagttctgggtcattggaggtgtgtcctcgcacctcttcgctgtgtttcaggg 320
|||||||||||||||||||||||||||||| || | || || || || ||||| || ||
Sbjct: 1 gaatgagcagttctgggtcattggaggtgtatctgcccatctgtttgccgtgttccaagg 60
Query: 321 acttctcnnggtcatagctggtgttgatacaagctncactnngacatcaaagggtggaga 380
||||||| ||| ||||||||||| || || |||| ||| ||| |||||| ||||||
Sbjct: 61 acttctcaaggtgatagctggtgtggacacgagcttcaccgtcacaacaaaggctggaga 120
Query: 381 tgatgacgaattctcagagctgtac 405
||||| || ||||| |||||||||
Sbjct: 121 cgatgaggagttctcggagctgtac 145
>gb|CK163482.1|CK163482 FGAS016110 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1161
Score = 79.8 bits (40), Expect = 1e-013
Identities = 96/116 (82%)
Strand = Plus / Plus
Query: 175 tggttcatgtcactttttatctgcatttttgctacaagcatcctnnnaatgagatggagt 234
|||| |||||| ||||| ||||||||||||||||| | || || |||||||||| |
Sbjct: 879 tggtacatgtcgcttttcatctgcatttttgctacgggtattctggaaatgagatgggct 938
Query: 235 ggtgttgggattgatgattggtggaggaatgagcagttctgggtcattggaggtgt 290
|||| | |||| |||||||| |||| |||||||||||||||||||||||||||
Sbjct: 939 cgtgtaccgnttgacgattggtgaaggattgagcagttctgggtcattggaggtgt 994
>gb|AJ613930.1|AJ613930 AJ613930 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 09493R, mRNA
sequence
Length = 759
Score = 77.8 bits (39), Expect = 5e-013
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 223 atgagatggagtgg-tgttgggattgatgattggtggaggaatgagcagttctgggtcat 281
||||| |||||||| |||||| ||||| || |||||||||||||| ||||||||||||||
Sbjct: 314 atgaggtggagtgggtgttggcattgacgagtggtggaggaatgaacagttctgggtcat 373
Query: 282 tggaggt 288
|||||||
Sbjct: 374 tggaggt 380
>gb|CV764818.1|CV764818 FGAS059203 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 824
Score = 75.8 bits (38), Expect = 2e-012
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 222 aatgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcat 281
|||||| |||||||||||||| || || || |||||||||||||| ||||||||||||||
Sbjct: 604 aatgaggtggagtggtgttggcatcgacgagtggtggaggaatgaacagttctgggtcat 663
Query: 282 tggagg 287
|||||
Sbjct: 664 cggagg 669
>gb|CV766823.1|CV766823 FGAS061210 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 873
Score = 75.8 bits (38), Expect = 2e-012
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 222 aatgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcat 281
|||||| |||||||||||||| || || || |||||||||||||| ||||||||||||||
Sbjct: 183 aatgaggtggagtggtgttggcatcgacgagtggtggaggaatgaacagttctgggtcat 242
Query: 282 tggagg 287
|||||
Sbjct: 243 cggagg 248
>gb|BJ319137.1|BJ319137 BJ319137 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf5c05 3', mRNA sequence
Length = 738
Score = 73.8 bits (37), Expect = 9e-012
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 223 atgagatggagtggtgttgggattgatgattggtggaggaatgagcagttctgggtcatt 282
||||| |||||||||||||| || || || |||||||||||||| ||||||||||||||
Sbjct: 589 atgaggtggagtggtgttggcatcgacgagtggtggaggaatgaacagttctgggtcatc 530
Query: 283 ggagg 287
|||||
Sbjct: 529 ggagg 525
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 113,344
Number of Sequences: 636343
Number of extensions: 113344
Number of successful extensions: 50064
Number of sequences better than 0.5: 128
Number of HSP's better than 0.5 without gapping: 127
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 49875
Number of HSP's gapped (non-prelim): 154
length of query: 425
length of database: 367,240,239
effective HSP length: 19
effective length of query: 406
effective length of database: 355,149,722
effective search space: 144190787132
effective search space used: 144190787132
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)