BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAJ4a11.xg.3.2
(2249 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ613982.1|AJ613982 AJ613982 Triticum turgidum subsp. du... 466 e-129
gb|BJ280477.1|BJ280477 BJ280477 Y. Ogihara unpublished cDNA... 448 e-124
gb|BE404909.1|BE404909 WHE1206_B04_C08ZS Wheat etiolated se... 414 e-113
gb|AL822419.1|AL822419 AL822419 p:234 Triticum aestivum cDN... 369 e-100
gb|CD883345.1|CD883345 F1.112P23F010502 F1 Triticum aestivu... 367 2e-099
gb|CA733538.1|CA733538 wlp1c.pk008.f9 wlp1c Triticum aestiv... 365 9e-099
gb|CD925307.1|CD925307 G750.116K07F010709 G750 Triticum aes... 365 9e-099
gb|CA696336.1|CA696336 wlmk8.pk0025.f5 wlmk8 Triticum aesti... 323 3e-086
gb|CA604417.1|CA604417 wr1.pk0038.g3 wr1 Triticum aestivum ... 283 3e-074
gb|AL829526.1|AL829526 AL829526 p:840 Triticum aestivum cDN... 174 2e-041
gb|BQ904977.1|BQ904977 Ta04_13i01_R Ta04_AAFC_ECORC_Fusariu... 172 7e-041
gb|CA744371.1|CA744371 wri1s.pk007.i6 wri1s Triticum aestiv... 92 2e-016
gb|BJ285474.1|BJ285474 BJ285474 Y. Ogihara unpublished cDNA... 84 5e-014
gb|CD883346.1|CD883346 F1.112P23R010627 F1 Triticum aestivu... 60 7e-007
>gb|AJ613982.1|AJ613982 AJ613982 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 09575R, mRNA
sequence
Length = 639
Score = 466 bits (235), Expect = e-129
Identities = 514/605 (84%), Gaps = 2/605 (0%)
Strand = Plus / Plus
Query: 857 tggatggactaacggtgatagtatccttgcagattctggtacggagcaacttgaattcat 916
||||||||| |||||||||||||||||||| |||||||| |||||||| |||||||| ||
Sbjct: 7 tggatggaccaacggtgatagtatccttgcggattctggaacggagcagcttgaatttat 66
Query: 917 agctctttcacagaggactggagatcccaaataccagca-gaaggcggagaacgtcatta 975
|||| | || ||||| || |||||||| ||||| |||| |||||| || || |||||
Sbjct: 67 agctttgtcccagagaaccggagatcctaaatatcagcntgaaggcagaaaatgtcatcc 126
Query: 976 aacagcttcaaaagatatatccaagtgatggtttactgcctatttacataaatcctcatt 1035
|||||||| ||||||||||||||||| || ||||| ||||| |||||||||||||| |
Sbjct: 127 gtcagcttcagaagatatatccaagtgacggcttacttcctatctacataaatcctcaat 186
Query: 1036 ctgggacagcatcatactcaactatcacatttggtgctatgggagacagcttctacgaat 1095
| || ||||||||||||||| || ||||| |||||||||||||| ||||||||||| |
Sbjct: 187 caggacaagcatcatactcaacaataacattcggtgctatgggagatagcttctacgagt 246
Query: 1096 atttgctcaaggtctggatccaggggaataaaactgagcatgtaaaacactacagacaaa 1155
| ||||||||||||||||| |||||||||||||| ||| |||||||| ||||||||||
Sbjct: 247 acttgctcaaggtctggattcaggggaataaaaccgagagcgtaaaacattacagacaaa 306
Query: 1156 tgtgggagacatcaatggaaggtctattaagtttaaccaagaaaactacaccatctaatt 1215
||||||||||||||||||||||| || |||| || |||| | |||||||||| |||||||
Sbjct: 307 tgtgggagacatcaatggaaggtttaataagcttgaccaggcaaactacaccctctaatt 366
Query: 1216 actactacatttgtgaaaagaatggtggctcgttgtctgacaagatggatgaacttgctt 1275
|| || || || || || | |||||||||||| ||| ||||||||||||||||||| |
Sbjct: 367 acacatatatctgcgagaaaagtggtggctcgttatctcacaagatggatgaacttgcat 426
Query: 1276 gctttgctcctggtatgctggccttaggtgcc-tctggttacgggccagaaaaatcagag 1334
|||| || |||||||||||||| | || ||| |||||||| ||||| |||||| | |
Sbjct: 427 gcttcgcccctggtatgctggcacttggagccctctggttatgggcctgaaaaagctaaa 486
Query: 1335 caaattatgaatcttgcaaaagagcttgctaggacctgctataatttctaccaaaccact 1394
|||||||||||||| ||| ||||||||||| ||||||| ||||| ||||||||||| |||
Sbjct: 487 caaattatgaatctggcagaagagcttgctcggacctgttataacttctaccaaacaact 546
Query: 1395 cccacgaagttggctggagaaaattattttttccatactggacaggacatgggtgtgggc 1454
||||| |||||||||||||| ||||||| |||||| ||| |||||| ||| ||||||
Sbjct: 547 cccacaaagttggctggagagaattattatttccacgctgnacaggatatgaacgtgggc 606
Query: 1455 acgtc 1459
|||||
Sbjct: 607 acgtc 611
>gb|BJ280477.1|BJ280477 BJ280477 Y. Ogihara unpublished cDNA library, Wh_r Triticum aestivum
cDNA clone whr8h03 5', mRNA sequence
Length = 463
Score = 448 bits (226), Expect = e-124
Identities = 399/457 (87%)
Strand = Plus / Plus
Query: 1159 gggagacatcaatggaaggtctattaagtttaaccaagaaaactacaccatctaattact 1218
|||||||||||||||||||| || |||| || |||| | |||||||||| |||||||||
Sbjct: 3 gggagacatcaatggaaggtttaataagcttgaccaggcaaactacaccctctaattaca 62
Query: 1219 actacatttgtgaaaagaatggtggctcgttgtctgacaagatggatgaacttgcttgct 1278
|| || || || || | |||||||||||| ||| ||||||||||||||||||| ||||
Sbjct: 63 catatatctgcgagaaaagtggtggctcgttatctcacaagatggatgaacttgcatgct 122
Query: 1279 ttgctcctggtatgctggccttaggtgcctctggttacgggccagaaaaatcagagcaaa 1338
| || |||||||||||||| | || ||||||||||| ||||| |||||| | | ||||
Sbjct: 123 tcgcccctggtatgctggcacttggngcctctggttatgggcctgaaaaagctaaacaaa 182
Query: 1339 ttatgaatcttgcaaaagagcttgctaggacctgctataatttctaccaaaccactccca 1398
|||||||||| ||| ||||||||||| ||||||| ||||| ||||||||||| |||||||
Sbjct: 183 ttatgaatctggcagaagagcttgctcggacctgttataacttctaccaaacaactccca 242
Query: 1399 cgaagttggctggagaaaattattttttccatactggacaggacatgggtgtgggcacgt 1458
| |||||||||||||| ||||||| |||||| |||||||||| ||| ||||||||||
Sbjct: 243 caaagttggctggagagaattattatttccacgctggacaggatatgaacgtgggcacgt 302
Query: 1459 cgtggaacatcttgagaccggagactgttgaatcactgatgtacctgtggcgcttgacgg 1518
| ||||| ||| ||||||| |||||||| |||||||| ||||||||||||||| | ||||
Sbjct: 303 catggaatatcctgagacccgagactgtggaatcactcatgtacctgtggcgccttacgg 362
Query: 1519 ggaataaaacataccaagattgggggtgggacatattccaggcatttgagaagaactccc 1578
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 363 ggaacaaaacataccaagattggggatgggacatattccaggcatttgagaagaactccc 422
Query: 1579 gcatagaatctggatatgtgggactgagagatgtgaa 1615
|||||| |||||||||||||||||| |||||||||||
Sbjct: 423 gcatagcatctggatatgtgggactaagagatgtgaa 459
>gb|BE404909.1|BE404909 WHE1206_B04_C08ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1206_B04_C08, mRNA
sequence
Length = 507
Score = 414 bits (209), Expect = e-113
Identities = 426/497 (85%), Gaps = 11/497 (2%)
Strand = Plus / Plus
Query: 211 gcctggcgctcctcttcttcctcttcgtcgcagccaccttcgccttctgggaccgccagt 270
|||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||| |
Sbjct: 1 gcctcgcgctcctcttcttcgtcttcgtcgccgccaccttcgccttctgggaccgccaat 60
Query: 271 cgctcgtcagcgagtacgagtctgagatttcccgattagaagatgatataaatcggttgc 330
||||||||||||||||||||||||||||||||| |||| || |||| ||||||| |||||
Sbjct: 61 cgctcgtcagcgagtacgagtctgagatttcccaattacaaaatgaaataaatcagttgc 120
Query: 331 atgaccagctaagaaaggctggagttaatctggatgaaaatccagtagtaagcaacaaga 390
||| ||| |||| |||||||| ||| | ||||| |||||||| |||||| |
Sbjct: 121 atggtcagttaaggaaggctggtgttcaactggaggaaaatcc-------agcaactgaa 173
Query: 391 attcc-agaaaagatcttgtagtagaaattgatcctgtcaataatgaaaaacgggaaaaa 449
||||| |||||||||||||||| | ||||||||| | |||||||||| |||||||
Sbjct: 174 attcccagaaaagatcttgtag---agattgatcctattaataatgaaaggagggaaaag 230
Query: 450 gttaaagaggcaatgctccatgcttggaattcttatgttaagtatgcctggggaatggac 509
||||| || || ||||||||||| |||||||| ||||| |||||||| |||||||||||
Sbjct: 231 gttaaggatgctatgctccatgcctggaattcctatgtaaagtatgcatggggaatggat 290
Query: 510 gagcttcagccacaatcgaagaatggtatcaacagctttggtggtcttggagcaaccctt 569
||||||||||| ||||| ||||||||| | || |||||||||||||| || ||||| |||
Sbjct: 291 gagcttcagccgcaatcaaagaatggtgttaatagctttggtggtctcggggcaactctt 350
Query: 570 gttgactcacttgataccctatacataatgggcctgaaagatgaatttcagaaagctaga 629
|| ||||| || ||||| || || ||||||||||| | |||||| |||||||| || |||
Sbjct: 351 gtggactcgctagatacactgtatataatgggcctaagagatgagtttcagaaggccaga 410
Query: 630 gactgggtggcggagtcattagactttgacaaggattatgatgcgagtgtttttgaaacg 689
||||||||||| ||||||||| |||||||||||||||||| || || ||||||||||||
Sbjct: 411 gactgggtggcagagtcattaagctttgacaaggattatgacgcaagcgtttttgaaacg 470
Query: 690 accataagggttgttgg 706
|||||||||||||||||
Sbjct: 471 accataagggttgttgg 487
>gb|AL822419.1|AL822419 AL822419 p:234 Triticum aestivum cDNA clone A09_p234_plate_25, mRNA
sequence
Length = 423
Score = 369 bits (186), Expect = e-100
Identities = 351/406 (86%)
Strand = Plus / Plus
Query: 1354 aagagcttgctaggacctgctataatttctaccaaaccactcccacgaagttggctggag 1413
||||||||||| ||||||| ||||| ||||||||||| |||||||| |||||||||||||
Sbjct: 2 aagagcttgctcggacctgttataacttctaccaaacaactcccacaaagttggctggag 61
Query: 1414 aaaattattttttccatactggacaggacatgggtgtgggcacgtcgtggaacatcttga 1473
| ||||||| |||||| ||| |||||| ||| |||||||| || || ||| |||
Sbjct: 62 agaattattatttccacgctgaacaggatatgaaccgtggcacgtcatgtaatatcctga 121
Query: 1474 gaccggagactgttgaatcactgatgtacctgtggcgcttgacggggaataaaacatacc 1533
|||| |||||||| |||||||| |||||||| |||||| | || ||||| ||||||||||
Sbjct: 122 gaccagagactgtggaatcacttatgtacctatggcgccttacagggaacaaaacatacc 181
Query: 1534 aagattgggggtgggacatattccaggcatttgagaagaactcccgcatagaatctggat 1593
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 182 aagattggggatgggacatattccaggcatttgagaagaactcccgcatagcatctggat 241
Query: 1594 atgtgggactgagagatgtgaacactggtgaaaaagacaacatgatgcagagtttcttcc 1653
|||| ||||| | ||||||||| | ||||||||| || ||| |||||||| |||||||
Sbjct: 242 atgtaggactaaaagatgtgaatagtggtgaaaaggatgacaagatgcagaccttcttcc 301
Query: 1654 tggcagagacgctgaagtacctgtacctacttttctcccctccatcagtcatatccttcg 1713
| |||||||||||||||||||| || ||||| |||||||||||||||||| |||| ||||
Sbjct: 302 tagcagagacgctgaagtacctctatctactgttctcccctccatcagtcgtatctttcg 361
Query: 1714 acgagtgggttttcaatactgaagctcacccattgagaattgttcc 1759
|| ||||||| ||||| ||| || ||||||| |||||||| |||||
Sbjct: 362 actagtgggtcttcaacacttaatctcaccctttgagaatcgttcc 407
>gb|CD883345.1|CD883345 F1.112P23F010502 F1 Triticum aestivum cDNA clone F1112P23, mRNA
sequence
Length = 656
Score = 367 bits (185), Expect = 2e-099
Identities = 320/365 (87%)
Strand = Plus / Plus
Query: 1395 cccacgaagttggctggagaaaattattttttccatactggacaggacatgggtgtgggc 1454
||||| ||| |||||||||| ||||||| |||||| ||| |||||| ||| |||||||
Sbjct: 1 cccacaaagctggctggagagaattattatttccacgctgaacaggatatgaatgtgggc 60
Query: 1455 acgtcgtggaacatcttgagaccggagactgttgaatcactgatgtacctgtggcgcttg 1514
||||| ||||| ||| ||||||| |||||||| |||||||| ||||||||||||||| |
Sbjct: 61 acgtcatggaatatcctgagaccagagactgtggaatcacttatgtacctgtggcgcctt 120
Query: 1515 acggggaataaaacataccaagattgggggtgggacatattccaggcatttgagaagaac 1574
|||||||| ||||||||||||||| |||| |||||||||||| |||||||||||||||||
Sbjct: 121 acggggaacaaaacataccaagatgggggatgggacatattcgaggcatttgagaagaac 180
Query: 1575 tcccgcatagaatctggatatgtgggactgagagatgtgaacactggtgaaaaagacaac 1634
|||||||||| |||||||||||| ||||| ||||||||||| | ||||||||| ||| ||
Sbjct: 181 tcccgcatagcatctggatatgtaggactaagagatgtgaatagtggtgaaaaggacgac 240
Query: 1635 atgatgcagagtttcttcctggcagagacgctgaagtacctgtacctacttttctcccct 1694
| |||||||| |||||||| |||||||||||||||||||| || || || |||||||||
Sbjct: 241 aagatgcagaccttcttcctagcagagacgctgaagtacctctatctgctgttctcccct 300
Query: 1695 ccatcagtcatatccttcgacgagtgggttttcaatactgaagctcacccattgagaatt 1754
|| |||||| |||| |||||||||||||| ||||| |||||||||||||| | ||||||
Sbjct: 301 ccgtcagtcgtatctttcgacgagtgggtcttcaacactgaagctcacccttggagaatc 360
Query: 1755 gttcc 1759
|||||
Sbjct: 361 gttcc 365
>gb|CA733538.1|CA733538 wlp1c.pk008.f9 wlp1c Triticum aestivum cDNA clone wlp1c.pk008.f9 5'
end, mRNA sequence
Length = 618
Score = 365 bits (184), Expect = 9e-099
Identities = 394/463 (85%), Gaps = 11/463 (2%)
Strand = Plus / Plus
Query: 143 gtcgtcttcctcgtcgtcggggacctggcggtacctgaacccggcgtactacctcaagcg 202
|||||| ||||| ||||| ||| | ||||||||||| ||||| || ||||||||||||||
Sbjct: 158 gtcgtcctcctcctcgtccggggcgtggcggtacctcaaccccgcctactacctcaagcg 217
Query: 203 gcccaagcgcctggcgctcctcttcttcctcttcgtcgcagccaccttcgccttctggga 262
|||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 218 gcccaagcgcctcgcgctcctcttcttcgtcttcgtcgccgccaccttcgccttctggga 277
Query: 263 ccgccagtcgctcgtcagcgagtacgagtctgagatttcccgattagaagatgatataaa 322
|||||| |||||||||||||||||||||||||||||||||| |||| || |||| |||||
Sbjct: 278 ccgccaatcgctcgtcagcgagtacgagtctgagatttcccaattacaaaatgaaataaa 337
Query: 323 tcggttgcatgaccagctaagaaaggctggagttaatctggatgaaaatccagtagtaag 382
|| |||||||| ||| |||| |||||||| ||| | ||||| |||||||| ||
Sbjct: 338 tcagttgcatggtcagttaaggaaggctggtgttcaactggaggaaaatcc-------ag 390
Query: 383 caacaagaattcc-agaaaagatcttgtagtagaaattgatcctgtcaataatgaaaaac 441
|||| |||||| |||||||||||| ||||| ||||||||| | ||||||||||
Sbjct: 391 caactgaaattcccagaaaagatctt---gtagagattgatcctattaataatgaaagga 447
Query: 442 gggaaaaagttaaagaggcaatgctccatgcttggaattcttatgttaagtatgcctggg 501
||||||| ||||| || || ||||||||||| |||||||| ||||| |||||||| ||||
Sbjct: 448 gggaaaaggttaaggatgctatgctccatgcctggaattcctatgtaaagtatgcatggg 507
Query: 502 gaatggacgagcttcagccacaatcgaagaatggtatcaacagctttggtggtcttggag 561
||||||| ||||||||||| ||||| ||||||||| | || |||||||||||||| || |
Sbjct: 508 gaatggatgagcttcagccgcaatcaaagaatggtgttaatagctttggtggtctcgggg 567
Query: 562 caacccttgttgactcacttgataccctatacataatgggcct 604
|||| ||||| ||||| || ||||| || || | |||||||||
Sbjct: 568 caactcttgtggactcgctagatacactgtatanaatgggcct 610
>gb|CD925307.1|CD925307 G750.116K07F010709 G750 Triticum aestivum cDNA clone G750116K07, mRNA
sequence
Length = 582
Score = 365 bits (184), Expect = 9e-099
Identities = 280/312 (89%)
Strand = Plus / Plus
Query: 1449 gtgggcacgtcgtggaacatcttgagaccggagactgttgaatcactgatgtacctgtgg 1508
||||||||||| ||||| ||| ||||||| |||||||| |||||||| ||||||||||||
Sbjct: 30 gtgggcacgtcatggaatatcctgagacccgagactgtggaatcactcatgtacctgtgg 89
Query: 1509 cgcttgacggggaataaaacataccaagattgggggtgggacatattccaggcatttgag 1568
||| | |||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 90 cgccttacggggaacaaaacataccaagattggggatgggacatattccaggcatttgag 149
Query: 1569 aagaactcccgcatagaatctggatatgtgggactgagagatgtgaacactggtgaaaaa 1628
|||||||||||||||| |||||||||||||||||| ||||||||||| | |||||||||
Sbjct: 150 aagaactcccgcatagcatctggatatgtgggactaagagatgtgaatagtggtgaaaag 209
Query: 1629 gacaacatgatgcagagtttcttcctggcagagacgctgaagtacctgtacctacttttc 1688
||| ||| |||||||| |||||||| ||||||||||| |||||||| || || || |||
Sbjct: 210 gacgacaagatgcagaccttcttcctagcagagacgctcaagtacctctatctgctgttc 269
Query: 1689 tcccctccatcagtcatatccttcgacgagtgggttttcaatactgaagctcacccattg 1748
|||||||| |||||| |||| |||||||||||||| ||||| |||||||||||||| |||
Sbjct: 270 tcccctccgtcagtcgtatctttcgacgagtgggtcttcaacactgaagctcaccctttg 329
Query: 1749 agaattgttcca 1760
||||| ||||||
Sbjct: 330 agaatcgttcca 341
>gb|CA696336.1|CA696336 wlmk8.pk0025.f5 wlmk8 Triticum aestivum cDNA clone wlmk8.pk0025.f5 5'
end, mRNA sequence
Length = 575
Score = 323 bits (163), Expect = 3e-086
Identities = 257/287 (89%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1474 gaccggagactgttgaatcactgatgtacctgtggcgcttgacggggaataaaacatacc 1533
|||| |||||||| |||||||| ||||||||||||||| | |||||||| ||||||||||
Sbjct: 1 gacccgagactgtggaatcactcatgtacctgtggcgccttacggggaacaaaacatacc 60
Query: 1534 aagattgggggtgggacatattccaggcatttgagaagaactcccgcatagaatctggat 1593
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 aagattggggatgggacatattccaggcatttgagaagaactcccgcatagcatctggat 120
Query: 1594 atgtgggactgagagatgtgaacactggtgaaaaagacaacatgatgcagagtttcttcc 1653
|||||||||| ||||||||||| | ||||||||| ||| ||| |||||||| |||||||
Sbjct: 121 atgtgggactaagagatgtgaatagtggtgaaaaggacgacaagatgcagaccttcttcc 180
Query: 1654 tggcagagacgctgaagtacctgtacctacttttctcccctccatcagtcatatccttcg 1713
| ||||||||||| |||||||| || || || ||||||||||| |||||| |||| ||||
Sbjct: 181 tagcagagacgctcaagtacctctatctgctgttctcccctccgtcagtcgtatctttcg 240
Query: 1714 acgagtgggttttcaatactgaagctcacccattgagaattgttcca 1760
|||||| ||| ||||| |||||||||||||| |||||||| ||||||
Sbjct: 241 acgagt-ggtcttcaacactgaagctcaccctttgagaatcgttcca 286
>gb|CA604417.1|CA604417 wr1.pk0038.g3 wr1 Triticum aestivum cDNA clone wr1.pk0038.g3 5'
end, mRNA sequence
Length = 659
Score = 283 bits (143), Expect = 3e-074
Identities = 266/306 (86%), Gaps = 1/306 (0%)
Strand = Plus / Plus
Query: 608 agatgaatttcagaaagctagagactgggtggcggagtcattagactttgacaaggatta 667
|||||| |||||||| || |||||||||||||| ||||||||| |||||||||||||||
Sbjct: 3 agatgagtttcagaaggccagagactgggtggcagagtcattaagctttgacaaggatta 62
Query: 668 tgatgcgagtgtttttgaaacgaccataagggttgttggaggtctgcttagttcatacga 727
||| || || ||||||||||||||||||||||||||||||||||| || ||| |||| ||
Sbjct: 63 tgacgcaagcgtttttgaaacgaccataagggttgttggaggtctcctcagtgcatatga 122
Query: 728 tctatctggtgataaagtatttcttgataaggctaaagatattacagatcgactcttacc 787
| | || ||||| ||||||||||| || ||||| || |||||| | |||||| | |||||
Sbjct: 123 tatgtcgggtgacaaagtatttctcgaaaaggcgaaggatattgctgatcgattgttacc 182
Query: 788 tgcttgggatacaacatctggcatcccttataatagaataaacctagctcatggacgagc 847
||| ||||||||||||||||| |||||||||||| ||| ||| |||||||||| |||||
Sbjct: 183 tgcctgggatacaacatctggtatcccttataattcaatcaacttagctcatggccgagc 242
Query: 848 ccataatcctggatggactaacggtgatagtatccttgcagattctggtacggagcaact 907
|||||| ||||||||| |||||||||| || |||||| |||||||| |||||||||||
Sbjct: 243 tcataattttggatggaccaacggtgataata-ccttgcngattctggaacggagcaact 301
Query: 908 tgaatt 913
||||||
Sbjct: 302 tgaatt 307
>gb|AL829526.1|AL829526 AL829526 p:840 Triticum aestivum cDNA clone G04_p840_plate_1, mRNA
sequence
Length = 304
Score = 174 bits (88), Expect = 2e-041
Identities = 121/131 (92%), Gaps = 2/131 (1%)
Strand = Plus / Plus
Query: 180 aacccggcgtactacctcaagcggcccaagcgcctggcgctcctcttcttcct--cttcg 237
||||| || |||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 4 aaccccgcctactacctcaagcggcccaagcgcctcgcgctcctcttcttcagtacttcg 63
Query: 238 tcgcagccaccttcgccttctgggaccgccagtcgctcgtcagcgagtacgagtctgaga 297
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 64 tcgccgccaccttcgccttctgggaccgccaatcgctcgtcagcgagtacgagtctgaga 123
Query: 298 tttcccgatta 308
|||||| ||||
Sbjct: 124 tttcccaatta 134
Score = 44.1 bits (22), Expect = 0.042
Identities = 72/88 (81%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 394 ccagaaaagatcttgtagtagaaattgatcctgtcaataatgaaaaacgggaaaaagtta 453
||||||||||||||||| | ||||||||| | ||| |||||| ||||||| ||||
Sbjct: 217 ccagaaaagatcttgtac---agattgatcctattaatgatgaaaggagggaaaaggtta 273
Query: 454 aagaggcaatgctccatgcttggaattc 481
| || || ||||||||||| ||||||||
Sbjct: 274 aggatgctatgctccatgcctggaattc 301
>gb|BQ904977.1|BQ904977 Ta04_13i01_R Ta04_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta04_13i01, mRNA
sequence
Length = 173
Score = 172 bits (87), Expect = 7e-041
Identities = 145/165 (87%), Gaps = 1/165 (0%)
Strand = Plus / Minus
Query: 1501 acctgtggcgcttgacggggaataaaacataccaagattgggggtgggacatattccagg 1560
||||||||||| | |||||||| |||||||||||||||||||| |||||||||||| |||
Sbjct: 173 acctgtggcgccttacggggaacaaaacataccaagattggggatgggacatattcgagg 114
Query: 1561 catttgagaagaactcc-cgcatagaatctggatatgtgggactgagagatgtgaacact 1619
||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||||| | |
Sbjct: 113 catttgagaagaactccdcgcatagcatctggatatgtaggactaagagatgtgaatagt 54
Query: 1620 ggtgaaaaagacaacatgatgcagagtttcttcctggcagagacg 1664
|||||||| ||| ||| || ||||| ||| ||| |||||||||
Sbjct: 53 ggtgaaaaggacgacaagaygcagaccytctycctagcagagacg 9
>gb|CA744371.1|CA744371 wri1s.pk007.i6 wri1s Triticum aestivum cDNA clone wri1s.pk007.i6 5'
end, mRNA sequence
Length = 467
Score = 91.7 bits (46), Expect = 2e-016
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 1686 ttctcccctccatcagtcatatccttcgacgagtgggttttcaatactgaagctcaccca 1745
||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||||||
Sbjct: 432 ttctcccctccgtcagtcgtatctttcgacgagtgggtcttcaacactgaagctcaccct 373
Query: 1746 ttgagaattgttcc 1759
|||||||| |||||
Sbjct: 372 ttgagaatcgttcc 359
>gb|BJ285474.1|BJ285474 BJ285474 Y. Ogihara unpublished cDNA library, Wh_r Triticum aestivum
cDNA clone whr8h03 3', mRNA sequence
Length = 515
Score = 83.8 bits (42), Expect = 5e-014
Identities = 80/93 (86%)
Strand = Plus / Minus
Query: 1668 aagtacctgtacctacttttctcccctccatcagtcatatccttcgacgagtgggttttc 1727
|||||||| || || || ||||||||||| |||||| |||| || || |||||||| |||
Sbjct: 511 aagtacctctatctgctgttctcccctccgtcagtcgtatctttngaagagtgggtcttc 452
Query: 1728 aatactgaagctcacccattgagaattgttcca 1760
|| |||||||||||||| |||||||| ||||||
Sbjct: 451 aacactgaagctcaccctttgagaatcgttcca 419
>gb|CD883346.1|CD883346 F1.112P23R010627 F1 Triticum aestivum cDNA clone F1112P23, mRNA
sequence
Length = 582
Score = 60.0 bits (30), Expect = 7e-007
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 1710 ttcgacgagtgggttttcaatactgaagctcacccattgagaattgttcc 1759
|||||||||||||| ||||| ||||| |||||||| |||||||| |||||
Sbjct: 582 ttcgacgagtgggtcttcaacactgaggctcaccctttgagaatcgttcc 533
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 399,662
Number of Sequences: 636343
Number of extensions: 399662
Number of successful extensions: 107182
Number of sequences better than 0.5: 14
Number of HSP's better than 0.5 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107145
Number of HSP's gapped (non-prelim): 29
length of query: 2249
length of database: 367,240,239
effective HSP length: 20
effective length of query: 2229
effective length of database: 354,513,379
effective search space: 790210321791
effective search space used: 790210321791
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)