BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF30a10.yg.2.1
(1130 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA502598.1|CA502598 WHE4302_D07_G14ZS Wheat meiotic anth... 274 1e-071
gb|AL826283.1|AL826283 AL826283 p:436 Triticum aestivum cDN... 238 7e-061
gb|BQ482920.1|BQ482920 WHE0573_H08_P15ZE Triticum monococcu... 230 2e-058
gb|CK203985.1|CK203985 FGAS012520 Triticum aestivum FGAS: L... 129 5e-028
gb|CK204326.1|CK204326 FGAS012862 Triticum aestivum FGAS: L... 129 5e-028
gb|CA606280.1|CA606280 wr1.pk0064.b2 wr1 Triticum aestivum ... 125 7e-027
gb|CA735931.1|CA735931 wpi1s.pk005.i18 wpi1s Triticum aesti... 123 3e-026
gb|CA744513.1|CA744513 wri1s.pk007.f2 wri1s Triticum aestiv... 117 2e-024
gb|BQ901343.1|BQ901343 Ta02_18b05_R Ta02_AAFC_ECORC_Fusariu... 111 1e-022
gb|CK202246.1|CK202246 FGAS010769 Triticum aestivum FGAS: L... 56 5e-006
gb|CK202501.1|CK202501 FGAS011026 Triticum aestivum FGAS: L... 56 5e-006
gb|BQ487369.1|BQ487369 WHE2307_G06_N11ZY Wheat pre-anthesis... 52 9e-005
gb|CA694818.1|CA694818 wlmk4.pk0025.f3 wlmk4 Triticum aesti... 50 3e-004
gb|CK197335.1|CK197335 FGAS005806 Triticum aestivum FGAS: L... 50 3e-004
gb|CA682624.1|CA682624 wlm96.pk0005.e2 wlm96 Triticum aesti... 48 0.001
gb|BE492549.1|BE492549 WHE0554_B11_B11ZE Triticum monococcu... 40 0.32
gb|BE516239.1|BE516239 WHE0608_H02_P04ZA Wheat ABA-treated ... 40 0.32
gb|BJ208284.1|BJ208284 BJ208284 Y. Ogihara unpublished cDNA... 40 0.32
gb|BJ215558.1|BJ215558 BJ215558 Y. Ogihara unpublished cDNA... 40 0.32
gb|BQ482858.1|BQ482858 WHE0573_C11_F21ZE Triticum monococcu... 40 0.32
gb|CA602765.1|CA602765 wr1.pk0008.h4 wr1 Triticum aestivum ... 40 0.32
gb|CA609177.1|CA609177 wr1.pk0101.e12 wr1 Triticum aestivum... 40 0.32
gb|CA614465.1|CA614465 wr1.pk161.e2 wr1 Triticum aestivum c... 40 0.32
gb|CA670849.1|CA670849 wlsu2.pk0002.e8 wlsu2 Triticum aesti... 40 0.32
gb|CA671028.1|CA671028 wlsu2.pk0003.e7 wlsu2 Triticum aesti... 40 0.32
gb|CA671561.1|CA671561 wlsu2.pk0011.d11 wlsu2 Triticum aest... 40 0.32
gb|CA672268.1|CA672268 wlsu2.pk016.g10 wlsu2 Triticum aesti... 40 0.32
gb|CA673381.1|CA673381 wlsu2.pk022.g9 wlsu2 Triticum aestiv... 40 0.32
gb|CA673603.1|CA673603 wlsu2.pk021.f15 wlsu2 Triticum aesti... 40 0.32
gb|CA673616.1|CA673616 wlsu2.pk021.j23 wlsu2 Triticum aesti... 40 0.32
gb|CA673718.1|CA673718 wlsu2.pk022.l5 wlsu2 Triticum aestiv... 40 0.32
gb|CA674139.1|CA674139 wlsu2.pk023.c15 wlsu2 Triticum aesti... 40 0.32
gb|CA674270.1|CA674270 wlsu2.pk023.o6 wlsu2 Triticum aestiv... 40 0.32
gb|CA675054.1|CA675054 wlsu2.pk027.i12 wlsu2 Triticum aesti... 40 0.32
gb|CA700993.1|CA700993 wkm2c.pk0001.c2 wkm2c Triticum aesti... 40 0.32
gb|CA701032.1|CA701032 wkm2c.pk0004.c5 wkm2c Triticum aesti... 40 0.32
gb|CD901821.1|CD901821 G356.105A14F010918 G356 Triticum aes... 40 0.32
gb|CD926866.1|CD926866 GR45.100E05F010302 GR45 Triticum aes... 40 0.32
gb|CD937347.1|CD937347 OV.106L21F010202 OV Triticum aestivu... 40 0.32
gb|CK151589.1|CK151589 FGAS034208 Triticum aestivum FGAS: T... 40 0.32
gb|CK169041.1|CK169041 FGAS043645 Triticum aestivum FGAS: T... 40 0.32
gb|CV760886.1|CV760886 FGAS055272 Triticum aestivum FGAS: L... 40 0.32
gb|CV767119.1|CV767119 FGAS061506 Triticum aestivum FGAS: L... 40 0.32
gb|CV779562.1|CV779562 FGAS073971 Triticum aestivum FGAS: L... 40 0.32
gb|DN949079.1|DN949079 H07_T3 WSWR cDNA library Triticum ae... 40 0.32
gb|DR741557.1|DR741557 FGAS030611 Triticum aestivum FGAS: L... 40 0.32
gb|DR741835.1|DR741835 FGAS030877 Triticum aestivum FGAS: L... 40 0.32
gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK... 40 0.32
>gb|CA502598.1|CA502598 WHE4302_D07_G14ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4302_D07_G14, mRNA sequence
Length = 662
Score = 274 bits (138), Expect = 1e-071
Identities = 378/458 (82%)
Strand = Plus / Plus
Query: 417 gaaatagaaactatttcccgagtgcagcaccgtaatcttgtgaagttgtttggtttttgc 476
|||||||| ||||| || | ||||| ||||||||||| |||||||||| ||| | |||
Sbjct: 44 gaaatagagactatatcaagggtgcaacaccgtaatctcgtgaagttgtatggctgctgc 103
Query: 477 cttgagggaaataaaccacttttggtttatgagtacatggagagtggaagccttgataaa 536
|| ||| | || | ||| || ||||||||||||| | |||||| ||||||||||||| |
Sbjct: 104 ctcgagagcaagacaccgctgttggtttatgagtgcctggagaatggaagccttgatcac 163
Query: 537 gcattgtttggaaatggaagattgaacttgaattggtcaacacgatataaaatatgcttg 596
|| |||||||||| ||| | |||||| | | ||| ||| ||||| | ||||||||
Sbjct: 164 gcgctgtttggaaagggaggcttgaacctagactggccaagacgattcgagatatgctta 223
Query: 597 gggattgcaagaggcttagcttatctccacgaagagtctagcatccgcattgtgcatagg 656
|| || |||||||| |||||||||||||||| ||||| ||| ||||||||||||| |||
Sbjct: 224 ggcatagcaagaggtatagcttatctccacgaggagtcgagcgtccgcattgtgcacagg 283
Query: 657 gacataaaggccagcaatgtattacttgatgccactttgaaccctaagatttcggatttc 716
||||| |||||||||||||| || || |||||| | | ||||| ||||| || ||||||
Sbjct: 284 gacattaaggccagcaatgtcttgctagatgccgatctcaacccaaagatctctgatttc 343
Query: 717 gggctcgccaaactttatgacgataaaaagacacatgttagcacaaaagttgctggtaca 776
||||| ||||| |||||||| || || ||||| ||||| |||||||||||||| || |||
Sbjct: 344 gggcttgccaagctttatgatgacaagaagactcatgtgagcacaaaagttgcaggcaca 403
Query: 777 tttggctatctttcacctgagtacgccatgagaggtcacatgactgagaaagttgatatt 836
|||||||| ||| |||||||||| |||||||||||||||||||||||||| ||||| ||
Sbjct: 404 tttggctaccttgcacctgagtatgccatgagaggtcacatgactgagaagattgatgtt 463
Query: 837 tttgcttttggtgtggtcatgttggagattattgctgg 874
||||| || |||||||| | |||||||| |||||||
Sbjct: 464 tttgcattcggtgtggtagcgctggagattgttgctgg 501
>gb|AL826283.1|AL826283 AL826283 p:436 Triticum aestivum cDNA clone E06_p436_plate_8_run_2,
mRNA sequence
Length = 573
Score = 238 bits (120), Expect = 7e-061
Identities = 285/340 (83%)
Strand = Plus / Plus
Query: 514 tggagagtggaagccttgataaagcattgtttggaaatggaagattgaacttgaattggt 573
|||||| ||||||||||||| | || |||||||||| ||| | |||||| | | |||
Sbjct: 2 tggagaatggaagccttgatcacgcgctgtttggaaagggaggcttgaacctagactggc 61
Query: 574 caacacgatataaaatatgcttggggattgcaagaggcttagcttatctccacgaagagt 633
||| ||||| | |||||||| || || |||||||| |||||||||||||||| ||||
Sbjct: 62 caagacgattcgagatatgcttaggcatagcaagaggtatagcttatctccacgaggagt 121
Query: 634 ctagcatccgcattgtgcatagggacataaaggccagcaatgtattacttgatgccactt 693
| ||| ||||||||||||| |||||||| |||||||||||||| || || |||||| |
Sbjct: 122 cgagcgtccgcattgtgcacagggacattaaggccagcaatgtcttgctagatgccgatc 181
Query: 694 tgaaccctaagatttcggatttcgggctcgccaaactttatgacgataaaaagacacatg 753
| ||||| ||||| || ||||||||||| ||||| |||||||| || || ||||| ||||
Sbjct: 182 tcaacccaaagatctctgatttcgggcttgccaagctttatgatgacaagaagactcatg 241
Query: 754 ttagcacaaaagttgctggtacatttggctatctttcacctgagtacgccatgagaggtc 813
| |||||||||||||| || ||||||||||| ||| |||||||||| |||||||||||||
Sbjct: 242 tgagcacaaaagttgcaggcacatttggctaccttgcacctgagtatgccatgagaggtc 301
Query: 814 acatgactgagaaagttgatatttttgcttttggtgtggt 853
||||||||||||| ||||| ||||||| || ||||||||
Sbjct: 302 acatgactgagaagattgatgtttttgcattcggtgtggt 341
>gb|BQ482920.1|BQ482920 WHE0573_H08_P15ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0573_H08_P15, mRNA
sequence
Length = 651
Score = 230 bits (116), Expect = 2e-058
Identities = 299/360 (83%)
Strand = Plus / Plus
Query: 515 ggagagtggaagccttgataaagcattgtttggaaatggaagattgaacttgaattggtc 574
||||| ||||||||||||| | || |||||||||| ||| | |||||| | | ||| |
Sbjct: 9 ggagaatggaagccttgatcacgcgctgtttggaaagggaggcttgaacctagactggcc 68
Query: 575 aacacgatataaaatatgcttggggattgcaagaggcttagcttatctccacgaagagtc 634
|| ||||| | |||||||| || || |||||||| |||||||||||||||| |||||
Sbjct: 69 aagacgattcgagatatgcttaggcatagcaagaggtatagcttatctccacgaggagtc 128
Query: 635 tagcatccgcattgtgcatagggacataaaggccagcaatgtattacttgatgccacttt 694
||| ||||||||||||| |||||||| |||||||||||||| || || |||||| | |
Sbjct: 129 gagcgtccgcattgtgcacagggacattaaggccagcaatgtcttgctagatgccgatct 188
Query: 695 gaaccctaagatttcggatttcgggctcgccaaactttatgacgataaaaagacacatgt 754
||||| ||||| || ||||||||||| ||||| |||||||| || || ||||| |||||
Sbjct: 189 caacccaaagatctctgatttcgggcttgccaagctttatgatgacaagaagactcatgt 248
Query: 755 tagcacaaaagttgctggtacatttggctatctttcacctgagtacgccatgagaggtca 814
|||||||||||||| || ||||||||||| ||| |||||||||| ||||||||||||||
Sbjct: 249 gagcacaaaagttgcaggcacatttggctaccttgcacctgagtatgccatgagaggtca 308
Query: 815 catgactgagaaagttgatatttttgcttttggtgtggtcatgttggagattattgctgg 874
|||||||||||| ||||| ||||||| || || ||||| | |||||||| |||||||
Sbjct: 309 catgactgagaagattgatgtttttgcattcggcgtggtagcgctggagattgttgctgg 368
>gb|CK203985.1|CK203985 FGAS012520 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 882
Score = 129 bits (65), Expect = 5e-028
Identities = 131/153 (85%)
Strand = Plus / Plus
Query: 722 cgccaaactttatgacgataaaaagacacatgttagcacaaaagttgctggtacatttgg 781
|||||| |||||||| || || ||||| ||||| |||||||||||||| || ||||||||
Sbjct: 111 cgccaagctttatgatgacaagaagactcatgtgagcacaaaagttgcaggcacatttgg 170
Query: 782 ctatctttcacctgagtacgccatgagaggtcacatgactgagaaagttgatatttttgc 841
|| ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 171 ttaccttgcacctgagtacgccatgagaggtcacatgactgagaagattgatgtttttgc 230
Query: 842 ttttggtgtggtcatgttggagattattgctgg 874
|| || ||||| | |||||||| |||||||
Sbjct: 231 attcggcgtggtagcgctggagattgttgctgg 263
>gb|CK204326.1|CK204326 FGAS012862 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 845
Score = 129 bits (65), Expect = 5e-028
Identities = 131/153 (85%)
Strand = Plus / Plus
Query: 722 cgccaaactttatgacgataaaaagacacatgttagcacaaaagttgctggtacatttgg 781
|||||| |||||||| || || ||||| ||||| |||||||||||||| || ||||||||
Sbjct: 112 cgccaagctttatgatgacaagaagactcatgtgagcacaaaagttgcaggcacatttgg 171
Query: 782 ctatctttcacctgagtacgccatgagaggtcacatgactgagaaagttgatatttttgc 841
|| ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 172 ttaccttgcacctgagtacgccatgagaggtcacatgactgagaagattgatgtttttgc 231
Query: 842 ttttggtgtggtcatgttggagattattgctgg 874
|| || ||||| | |||||||| |||||||
Sbjct: 232 attcggcgtggtagcgctggagattgttgctgg 264
>gb|CA606280.1|CA606280 wr1.pk0064.b2 wr1 Triticum aestivum cDNA clone wr1.pk0064.b2 5'
end, mRNA sequence
Length = 451
Score = 125 bits (63), Expect = 7e-027
Identities = 102/115 (88%)
Strand = Plus / Plus
Query: 415 ctgaaatagaaactatttcccgagtgcagcaccgtaatcttgtgaagttgtttggttttt 474
|||||||||||||||| || |||||||| ||||||||||| |||||||||| ||||| |
Sbjct: 42 ctgaaatagaaactatatctcgagtgcaacaccgtaatctcgtgaagttgtatggttgct 101
Query: 475 gccttgagggaaataaaccacttttggtttatgagtacatggagagtggaagcct 529
|||||||||| ||||| ||||| |||||||||||||| |||||| |||||||||
Sbjct: 102 gccttgagggcaataagccactgctggtttatgagtacctggagaatggaagcct 156
Score = 77.8 bits (39), Expect = 1e-012
Identities = 79/91 (86%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 709 cggatttcgggctcgccaaactttatgacgataaaaagacacatgttagcacaaaagttg 768
||||||||||||| || |||||||| || || | ||||||||||||||||| |||||||
Sbjct: 354 cggatttcgggctggctaaactttaagatgaccagaagacacatgttagcacgaaagttg 413
Query: 769 ctggtacatttggctatctttcacctgagta 799
|||| ||||||| |||||| ||||||||||
Sbjct: 414 ctggagcatttgg-tatcttgcacctgagta 443
>gb|CA735931.1|CA735931 wpi1s.pk005.i18 wpi1s Triticum aestivum cDNA clone wpi1s.pk005.i18
5' end, mRNA sequence
Length = 601
Score = 123 bits (62), Expect = 3e-026
Identities = 134/158 (84%)
Strand = Plus / Minus
Query: 618 tatctccacgaagagtctagcatccgcattgtgcatagggacataaaggccagcaatgta 677
||||| || ||||| ||||||||||| ||||||| ||||||||||||||||||||| |
Sbjct: 174 tatcttcatgaagaatctagcatccgtgttgtgcacagggacataaaggccagcaatatc 115
Query: 678 ttacttgatgccactttgaaccctaagatttcggatttcgggctcgccaaactttatgac 737
|||||||| |||| | | || |||||||| || ||||||||||| || |||||||||||
Sbjct: 114 ttacttgacgccaatctcaatcctaagatctcagatttcgggctggctaaactttatgat 55
Query: 738 gataaaaagacacatgttagcacaaaagttgctggtac 775
|| | ||||| ||||| ||||| ||||||||||||||
Sbjct: 54 gaccagaagacgcatgtcagcacgaaagttgctggtac 17
Score = 121 bits (61), Expect = 1e-025
Identities = 184/225 (81%)
Strand = Plus / Minus
Query: 305 tggtgaagggggatatggatcagtttataagggtaaattagttgatggcagtgtggtggc 364
|||| |||| |||||||| ||||| |||||||| || ||| |||||| || | |||||
Sbjct: 487 tggtcaaggaggatatggttcagtctataagggaaagttaactgatggtaggttcgtggc 428
Query: 365 aattaaacaactatctgaaacatctcgccaagggaagaaggaattcgtagctgaaataga 424
| | || || || |||||| |||||| || || || |||||||| | | | ||||||||
Sbjct: 427 agtgaagcagctgtctgaagcatctcatcagggaaaaaaggaatttgcaacggaaataga 368
Query: 425 aactatttcccgagtgcagcaccgtaatcttgtgaagttgtttggtttttgccttgaggg 484
|||||| || |||||||| ||||||||||| |||||||||| ||||| |||||||||||
Sbjct: 367 aactatatctcgagtgcaacaccgtaatctcgtgaagttgtatggttgctgccttgaggg 308
Query: 485 aaataaaccacttttggtttatgagtacatggagagtggaagcct 529
||||| ||||| |||||||||||| | |||||| |||||||||
Sbjct: 307 caataagccactgctggtttatgagtgcctggagaatggaagcct 263
>gb|CA744513.1|CA744513 wri1s.pk007.f2 wri1s Triticum aestivum cDNA clone wri1s.pk007.f2 5'
end, mRNA sequence
Length = 421
Score = 117 bits (59), Expect = 2e-024
Identities = 131/155 (84%)
Strand = Plus / Plus
Query: 618 tatctccacgaagagtctagcatccgcattgtgcatagggacataaaggccagcaatgta 677
||||| || ||||| ||||||||||| ||||||| ||||||||||||||||||||| |
Sbjct: 266 tatcttcatgaagaatctagcatccgtgttgtgcacagggacataaaggccagcaatatc 325
Query: 678 ttacttgatgccactttgaaccctaagatttcggatttcgggctcgccaaactttatgac 737
|||||||| |||| | | || |||||||| || ||||||||||| || |||||||||||
Sbjct: 326 ttacttgacgccaatctcaatcctaagatctcagatttcgggctggctaaactttatgat 385
Query: 738 gataaaaagacacatgttagcacaaaagttgctgg 772
|| | ||||| ||||| ||||| |||||||||||
Sbjct: 386 gaccagaagacgcatgtcagcacgaaagttgctgg 420
Score = 113 bits (57), Expect = 3e-023
Identities = 99/113 (87%)
Strand = Plus / Plus
Query: 417 gaaatagaaactatttcccgagtgcagcaccgtaatcttgtgaagttgtttggtttttgc 476
|||||||||||||| || |||||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 65 gaaatagaaactatatctcgagtgcaacaccgtaatctcgtgaagttgtatggttgctgc 124
Query: 477 cttgagggaaataaaccacttttggtttatgagtacatggagagtggaagcct 529
|||||||| ||||| ||||| |||||||||||| | |||||| |||||||||
Sbjct: 125 cttgagggcaataagccactgctggtttatgagtgcctggagaatggaagcct 177
>gb|BQ901343.1|BQ901343 Ta02_18b05_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_18b05, mRNA
sequence
Length = 583
Score = 111 bits (56), Expect = 1e-022
Identities = 272/343 (79%), Gaps = 7/343 (2%)
Strand = Plus / Minus
Query: 171 tggaggcacaaaaggagaaaagtatcactagagcagcaagagctctacaatattgttcga 230
|||||||| |||| ||||||| ||||| | ||||| |||||||||||| |||||| ||
Sbjct: 338 tggaggcagaaaaagagaaaactatcattggagcaagaagagctctacagtattgtggga 279
Query: 231 atacctaatgtattctgttacacttatggtgaactaaggaccgccactgaaaattttagt 290
| ||||||||| || |||| |||||| || ||| | || ||||| ||||| |||
Sbjct: 278 agacctaatgtcctcagtta------tggtgagctgaggtcagctactgataatttcagt 225
Query: 291 tctgctaatcttcttggtgaagggggatatggatcagtttataagggtaaattagttgat 350
||| ||| ||||||||| |||| |||||||| || ||||||||||| || ||| ||||
Sbjct: 224 cctgataaccttcttggtcaaggaggatatgggtcggtttataagggaaagttaactgat 165
Query: 351 ggcagtgtggtggcaattaaacaactatctgaaacatctcgccaagggaagaaggaattc 410
|| || | |||||| | || || || ||||||| ||||| || || || | ||||||
Sbjct: 164 ggtaggttcgtggcagtgaagcagctgtctgaaaaatctcatcagggaaaaagggaattt 105
Query: 411 gtagctgaaatagaaactatttcccgagtgcagcaccgtaatcttgtgaagttgtttggt 470
| | | |||||||||||||| || |||||||| ||||||||||| |||||| ||| ||||
Sbjct: 104 gcaacggaaatagaaactatatctcgagtgcaacaccgtaatctggtgaagctgtatggt 45
Query: 471 ttttgccttgag-ggaaataaaccacttttggtttatgagtac 512
| ||||||||| || ||||| ||||| ||||||||||||||
Sbjct: 44 tgctgccttgagsggcaataagccactgctggtttatgagtac 2
>gb|CK202246.1|CK202246 FGAS010769 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 853
Score = 56.0 bits (28), Expect = 5e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 771 ggtacatttggctatctttcacctgagtacgccatgagaggtcacatgactgagaa 826
||||||||||| ||||| |||||||||| ||||||||||| || ||||| |||||
Sbjct: 115 ggtacatttggttatctcgcacctgagtatgccatgagaggccatatgacagagaa 170
>gb|CK202501.1|CK202501 FGAS011026 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 833
Score = 56.0 bits (28), Expect = 5e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 771 ggtacatttggctatctttcacctgagtacgccatgagaggtcacatgactgagaa 826
||||||||||| ||||| |||||||||| ||||||||||| || ||||| |||||
Sbjct: 114 ggtacatttggttatctcgcacctgagtatgccatgagaggccatatgacagagaa 169
>gb|BQ487369.1|BQ487369 WHE2307_G06_N11ZY Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2307_G06_N11, mRNA sequence
Length = 458
Score = 52.0 bits (26), Expect = 9e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 699 cctaagatttcggatttcgggctcgccaaactttatga 736
|||||||| || |||||||||||||||||||| |||||
Sbjct: 158 cctaagatctcagatttcgggctcgccaaactatatga 121
Score = 40.1 bits (20), Expect = 0.32
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 444 caccgtaatcttgtgaagttgtttggtt 471
||||||||||||| |||||||| |||||
Sbjct: 455 caccgtaatcttgcgaagttgtatggtt 428
>gb|CA694818.1|CA694818 wlmk4.pk0025.f3 wlmk4 Triticum aestivum cDNA clone wlmk4.pk0025.f3
5' end, mRNA sequence
Length = 508
Score = 50.1 bits (25), Expect = 3e-004
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 600 attgcaagaggcttagcttatctccacgaagagtctagcatccgcattgtgcatagggac 659
||||||||||| |||| |||||||| || ||||| ||||| || || || || ||||||
Sbjct: 155 attgcaagaggtctagcatatctccatgaggagtccagcatgcggatagtccacagggac 214
Query: 660 ataaaggccagcaatgt 676
|| || |||||||||||
Sbjct: 215 atcaaagccagcaatgt 231
>gb|CK197335.1|CK197335 FGAS005806 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 825
Score = 50.1 bits (25), Expect = 3e-004
Identities = 108/136 (79%)
Strand = Plus / Plus
Query: 276 actgaaaattttagttctgctaatcttcttggtgaagggggatatggatcagtttataag 335
||||||||||| |||||| || ||||||||| |||| |||||||| || |||| ||||
Sbjct: 677 actgaaaatttcagttctaatacccttcttggtcaaggaggatatgggtcggtttttaag 736
Query: 336 ggtaaattagttgatggcagtgtggtggcaattaaacaactatctgaaacatctcgccaa 395
|| || || |||||| || | |||||| | || || || ||||||||||||| ||
Sbjct: 737 ggaaagtttactgatggtaggttcgtggcantgaagcacctgtctgaaacatctcatcag 796
Query: 396 gggaagaaggaattcg 411
||||| ||||||||||
Sbjct: 797 gggaaaaaggaattcg 812
>gb|CA682624.1|CA682624 wlm96.pk0005.e2 wlm96 Triticum aestivum cDNA clone wlm96.pk0005.e2
5' end, mRNA sequence
Length = 662
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 597 gggattgcaagaggcttagcttatctccacga 628
||||||||||||||||| |||||||| |||||
Sbjct: 34 gggattgcaagaggcttggcttatctacacga 65
>gb|BE492549.1|BE492549 WHE0554_B11_B11ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0554_B11_B11, mRNA
sequence
Length = 413
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 224 attggtgcaacagttttagg 205
>gb|BE516239.1|BE516239 WHE0608_H02_P04ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0608_H02_P04, mRNA sequence
Length = 494
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 442 attggtgcaacagttttagg 423
>gb|BJ208284.1|BJ208284 BJ208284 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh7j12 5', mRNA sequence
Length = 359
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 151 attggtgcaacagttttagg 132
>gb|BJ215558.1|BJ215558 BJ215558 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh7j12 3', mRNA sequence
Length = 276
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 151 attggtgcaacagttttagg 170
>gb|BQ482858.1|BQ482858 WHE0573_C11_F21ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0573_C11_F21, mRNA
sequence
Length = 420
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 224 attggtgcaacagttttagg 205
>gb|CA602765.1|CA602765 wr1.pk0008.h4 wr1 Triticum aestivum cDNA clone wr1.pk0008.h4 5'
end, mRNA sequence
Length = 379
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 191 attggtgcaacagttttagg 172
>gb|CA609177.1|CA609177 wr1.pk0101.e12 wr1 Triticum aestivum cDNA clone wr1.pk0101.e12 5'
end, mRNA sequence
Length = 460
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 284 attggtgcaacagttttagg 265
>gb|CA614465.1|CA614465 wr1.pk161.e2 wr1 Triticum aestivum cDNA clone wr1.pk161.e2 5' end,
mRNA sequence
Length = 518
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 328 attggtgcaacagttttagg 309
>gb|CA670849.1|CA670849 wlsu2.pk0002.e8 wlsu2 Triticum aestivum cDNA clone wlsu2.pk0002.e8
5' end, mRNA sequence
Length = 557
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 198 attggtgcaacagttttagg 217
>gb|CA671028.1|CA671028 wlsu2.pk0003.e7 wlsu2 Triticum aestivum cDNA clone wlsu2.pk0003.e7
5' end, mRNA sequence
Length = 580
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 198 attggtgcaacagttttagg 217
>gb|CA671561.1|CA671561 wlsu2.pk0011.d11 wlsu2 Triticum aestivum cDNA clone
wlsu2.pk0011.d11 5' end, mRNA sequence
Length = 565
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 196 attggtgcaacagttttagg 215
>gb|CA672268.1|CA672268 wlsu2.pk016.g10 wlsu2 Triticum aestivum cDNA clone wlsu2.pk016.g10
5' end, mRNA sequence
Length = 500
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 230 attggtgcaacagttttagg 249
>gb|CA673381.1|CA673381 wlsu2.pk022.g9 wlsu2 Triticum aestivum cDNA clone wlsu2.pk022.g9 5'
end, mRNA sequence
Length = 388
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 226 attggtgcaacagttttagg 245
>gb|CA673603.1|CA673603 wlsu2.pk021.f15 wlsu2 Triticum aestivum cDNA clone wlsu2.pk021.f15
5' end, mRNA sequence
Length = 451
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 228 attggtgcaacagttttagg 247
>gb|CA673616.1|CA673616 wlsu2.pk021.j23 wlsu2 Triticum aestivum cDNA clone wlsu2.pk021.j23
5' end, mRNA sequence
Length = 452
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 226 attggtgcaacagttttagg 245
>gb|CA673718.1|CA673718 wlsu2.pk022.l5 wlsu2 Triticum aestivum cDNA clone wlsu2.pk022.l5 5'
end, mRNA sequence
Length = 520
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 228 attggtgcaacagttttagg 247
>gb|CA674139.1|CA674139 wlsu2.pk023.c15 wlsu2 Triticum aestivum cDNA clone wlsu2.pk023.c15
5' end, mRNA sequence
Length = 482
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 212 attggtgcaacagttttagg 231
>gb|CA674270.1|CA674270 wlsu2.pk023.o6 wlsu2 Triticum aestivum cDNA clone wlsu2.pk023.o6 5'
end, mRNA sequence
Length = 462
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 210 attggtgcaacagttttagg 229
>gb|CA675054.1|CA675054 wlsu2.pk027.i12 wlsu2 Triticum aestivum cDNA clone wlsu2.pk027.i12
5' end, mRNA sequence
Length = 452
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 208 attggtgcaacagttttagg 227
>gb|CA700993.1|CA700993 wkm2c.pk0001.c2 wkm2c Triticum aestivum cDNA clone wkm2c.pk0001.c2
5' end, mRNA sequence
Length = 535
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 334 attggtgcaacagttttagg 315
>gb|CA701032.1|CA701032 wkm2c.pk0004.c5 wkm2c Triticum aestivum cDNA clone wkm2c.pk0004.c5
5' end, mRNA sequence
Length = 493
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 332 attggtgcaacagttttagg 313
>gb|CD901821.1|CD901821 G356.105A14F010918 G356 Triticum aestivum cDNA clone G356105A14,
mRNA sequence
Length = 336
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 160 attggtgcaacagttttagg 141
>gb|CD926866.1|CD926866 GR45.100E05F010302 GR45 Triticum aestivum cDNA clone GR45100E05,
mRNA sequence
Length = 535
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 337 attggtgcaacagttttagg 318
>gb|CD937347.1|CD937347 OV.106L21F010202 OV Triticum aestivum cDNA clone OV106L21, mRNA
sequence
Length = 532
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 334 attggtgcaacagttttagg 315
>gb|CK151589.1|CK151589 FGAS034208 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 876
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 339 attggtgcaacagttttagg 358
>gb|CK169041.1|CK169041 FGAS043645 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 900
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 473 attggtgcaacagttttagg 454
>gb|CV760886.1|CV760886 FGAS055272 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 829
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 123 attggtgcaacagttttagg 142
||||||||||||||||||||
Sbjct: 474 attggtgcaacagttttagg 455
>gb|CV767119.1|CV767119 FGAS061506 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 842
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 711 gatttcgggctcgccaaact 730
||||||||||||||||||||
Sbjct: 714 gatttcgggctcgccaaact 733
>gb|CV779562.1|CV779562 FGAS073971 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 839
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 711 gatttcgggctcgccaaact 730
||||||||||||||||||||
Sbjct: 551 gatttcgggctcgccaaact 570
>gb|DN949079.1|DN949079 H07_T3 WSWR cDNA library Triticum aestivum cDNA, mRNA sequence
Length = 929
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 711 gatttcgggctcgccaaact 730
||||||||||||||||||||
Sbjct: 341 gatttcgggctcgccaaact 360
>gb|DR741557.1|DR741557 FGAS030611 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1095
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 711 gatttcgggctcgccaaact 730
||||||||||||||||||||
Sbjct: 627 gatttcgggctcgccaaact 646
>gb|DR741835.1|DR741835 FGAS030877 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1075
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 711 gatttcgggctcgccaaact 730
||||||||||||||||||||
Sbjct: 466 gatttcgggctcgccaaact 485
>gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (TAK14), and LRK14 (Lrk14)
genes, complete cds; and unknown gene
Length = 43606
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 711 gatttcgggctcgccaaact 730
||||||||||||||||||||
Sbjct: 36516 gatttcgggctcgccaaact 36497
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 144,350
Number of Sequences: 636343
Number of extensions: 144350
Number of successful extensions: 35509
Number of sequences better than 0.5: 48
Number of HSP's better than 0.5 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35434
Number of HSP's gapped (non-prelim): 73
length of query: 1130
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1110
effective length of database: 354,513,379
effective search space: 393509850690
effective search space used: 393509850690
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)