BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AB021176.2.1
(1318 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ483963.1|BQ483963 WHE3514_H03_O06ZS Wheat unstressed r... 349 3e-094
gb|CK200504.1|CK200504 FGAS009019 Triticum aestivum FGAS: L... 349 3e-094
gb|CK194135.1|CK194135 FGAS002554 Triticum aestivum FGAS: L... 345 5e-093
gb|BQ743190.1|BQ743190 WHE4101_A11_A21ZS Wheat salt-stresse... 341 7e-092
gb|CD877614.1|CD877614 AZO4.100L12F010925 AZO4 Triticum aes... 280 2e-073
gb|CA650372.1|CA650372 wre1n.pk0152.e6 wre1n Triticum aesti... 246 3e-063
gb|CK204531.1|CK204531 FGAS013067 Triticum aestivum FGAS: L... 135 9e-030
gb|BE518372.1|BE518372 WHE0815_H07_P13ZS Wheat vernalized c... 133 3e-029
gb|CK200217.1|CK200217 FGAS008726 Triticum aestivum FGAS: L... 125 8e-027
gb|CD872355.1|CD872355 AZO2.120H03F010209 AZO2 Triticum aes... 111 1e-022
gb|BQ483971.1|BQ483971 WHE3514_H12_O24ZS Wheat unstressed r... 103 3e-020
gb|CA643823.1|CA643823 wre1n.pk0080.h10 wre1n Triticum aest... 101 1e-019
gb|BE444358.1|BE444358 WHE1118_C01_E02ZS Wheat etiolated se... 90 5e-016
gb|BU099866.1|BU099866 WHE3312_D05_H10ZS Chinese Spring whe... 80 4e-013
gb|CK195199.1|CK195199 FGAS003638 Triticum aestivum FGAS: L... 74 3e-011
gb|BQ295218.1|BQ295218 WHE2867_E05_I09ZS Wheat unstressed r... 60 4e-007
gb|BQ753058.1|BQ753058 WHE4122_E06_I12ZS Wheat salt-stresse... 60 4e-007
gb|CA614732.1|CA614732 wr1.pk175.f12 wr1 Triticum aestivum ... 54 3e-005
gb|CA613525.1|CA613525 wr1.pk0152.h2 wr1 Triticum aestivum ... 52 1e-004
gb|CD452671.1|CD452671 WHE1118_C01_E02ZT CS wheat etiolated... 52 1e-004
gb|CA598319.1|CA598319 wyr1c.pk005.k22 wyr1c Triticum aesti... 50 4e-004
gb|BE407052.1|BE407052 WHE0448_d06_h12zS Wheat etiolated se... 44 0.024
gb|BJ225192.1|BJ225192 BJ225192 Y. Ogihara unpublished cDNA... 44 0.024
gb|BQ484089.1|BQ484089 WHE3516_C08_F16ZS Wheat unstressed r... 44 0.024
gb|AL825643.1|AL825643 AL825643 p:234 Triticum aestivum cDN... 44 0.024
gb|CD926020.1|CD926020 G750.119L23F010711 G750 Triticum aes... 44 0.024
gb|CK207395.1|CK207395 FGAS019016 Triticum aestivum FGAS: L... 44 0.024
gb|BE443370.1|BE443370 WHE1104_H10_P20ZS Wheat etiolated se... 42 0.096
gb|BF201899.1|BF201899 WHE1759-1762_B22_B22ZS Wheat pre-ant... 42 0.096
gb|CA743799.1|CA743799 wri1s.pk005.p2 wri1s Triticum aestiv... 42 0.096
gb|CD452458.1|CD452458 WHE1104_H10_P20ZT CS wheat etiolated... 42 0.096
gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC... 42 0.096
gb|BE423519.1|BE423519 WHE0071_G11_M21ZS Wheat endosperm cD... 40 0.38
gb|BE492104.1|BE492104 WHE0551_F09_F09ZE Triticum monococcu... 40 0.38
gb|BG262519.1|BG262519 WHE0936_H09_P18ZS Wheat 5-15 DAP spi... 40 0.38
gb|BJ229428.1|BJ229428 BJ229428 Y. Ogihara unpublished cDNA... 40 0.38
gb|BJ259624.1|BJ259624 BJ259624 Y. Ogihara unpublished cDNA... 40 0.38
gb|BJ265336.1|BJ265336 BJ265336 Y. Ogihara unpublished cDNA... 40 0.38
gb|BJ269171.1|BJ269171 BJ269171 Y. Ogihara unpublished cDNA... 40 0.38
gb|BJ274116.1|BJ274116 BJ274116 Y. Ogihara unpublished cDNA... 40 0.38
gb|BJ289694.1|BJ289694 BJ289694 Y. Ogihara unpublished cDNA... 40 0.38
gb|BJ296025.1|BJ296025 BJ296025 Y. Ogihara unpublished cDNA... 40 0.38
gb|BQ166904.1|BQ166904 WHE0941_A11_A21ZT Wheat 5-15 DAP spi... 40 0.38
gb|BQ237007.1|BQ237007 TaE05023F09F TaE05 Triticum aestivum... 40 0.38
gb|BQ238161.1|BQ238161 TaE05007G05F TaE05 Triticum aestivum... 40 0.38
gb|BQ238315.1|BQ238315 TaE05005G01F TaE05 Triticum aestivum... 40 0.38
gb|BQ802954.1|BQ802954 WHE2832_A06_B12ZS Triticum monococcu... 40 0.38
gb|CA603765.1|CA603765 wr1.pk0032.h2 wr1 Triticum aestivum ... 40 0.38
gb|CA607116.1|CA607116 wr1.pk0074.e8 wr1 Triticum aestivum ... 40 0.38
gb|CA631084.1|CA631084 wle1n.pk0043.g12 wle1n Triticum aest... 40 0.38
gb|CA648386.1|CA648386 wre1n.pk0128.f5 wre1n Triticum aesti... 40 0.38
gb|CA649766.1|CA649766 wre1n.pk0147.h9 wre1n Triticum aesti... 40 0.38
gb|CA651283.1|CA651283 wre1n.pk175.h8 wre1n Triticum aestiv... 40 0.38
gb|CA733702.1|CA733702 wlp1c.pk005.p3 wlp1c Triticum aestiv... 40 0.38
gb|CD454097.1|CD454097 WHE0971_E03_I05ZT CS wheat pre-anthe... 40 0.38
gb|CD871808.1|CD871808 AZO2.119B20F010207 AZO2 Triticum aes... 40 0.38
gb|CD888376.1|CD888376 G118.107N02R010925 G118 Triticum aes... 40 0.38
gb|CD902545.1|CD902545 G356.107F11R011024 G356 Triticum aes... 40 0.38
gb|CD903090.1|CD903090 G356.109B18F010919 G356 Triticum aes... 40 0.38
gb|CD932468.1|CD932468 GR45.118B05R010830 GR45 Triticum aes... 40 0.38
gb|CD935991.1|CD935991 OV.103A22F010205 OV Triticum aestivu... 40 0.38
gb|CK196437.1|CK196437 FGAS004895 Triticum aestivum FGAS: L... 40 0.38
gb|CK206635.1|CK206635 FGAS018237 Triticum aestivum FGAS: L... 40 0.38
gb|CK212172.1|CK212172 FGAS024040 Triticum aestivum FGAS: L... 40 0.38
gb|CK213031.1|CK213031 FGAS024930 Triticum aestivum FGAS: L... 40 0.38
gb|AJ611450.1|AJ611450 AJ611450 Triticum turgidum subsp. du... 40 0.38
gb|AJ611516.1|AJ611516 AJ611516 Triticum turgidum subsp. du... 40 0.38
gb|CN008769.1|CN008769 WHE2644_H11_P22ZE Wheat Fusarium gra... 40 0.38
gb|AL810056.1|AL810056 AL810056 d:15 Triticum aestivum cDNA... 40 0.38
>gb|BQ483963.1|BQ483963 WHE3514_H03_O06ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3514_H03_O06, mRNA sequence
Length = 684
Score = 349 bits (176), Expect = 3e-094
Identities = 317/364 (87%)
Strand = Plus / Plus
Query: 273 gatggagtgccccgccgagtgttcccagtcatgctacgccgactgcagctcctgcaaacc 332
|||||| ||||||||| | || ||||||| |||||||||||||||| || ||||||||
Sbjct: 268 gatggactgccccgccaactgcccccagtcctgctacgccgactgcaaatcatgcaaacc 327
Query: 333 cgtctgcgtgtgcagcgtgccgggggcgtgcggcgacccgcgcttcatcggcggcgacgg 392
|||||||||||||| | ||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 328 cgtctgcgtgtgcaacaccccgggggcgtgcggcgacccgcggttcataggcggtgacgg 387
Query: 393 caacgccttctacttccacggccgccgggacgccgacttctgcgtgctctccgaccgcga 452
||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||
Sbjct: 388 caacgccttctacttccacggacgcagggacgccgacttctgcgtcgtctccgaccgtga 447
Query: 453 cctccacatcaacgcgcacttcatcggcaagcacggcgccgacggcatgtcccgggactt 512
||| ||||||||||| ||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 448 ccttcacatcaacgcacacttcatcggcaagagcggccacagcggcatgtcccgggactt 507
Query: 513 cacgtggatccaggccatcgccgtgctcttcgacggccacgagctctacgtcggcgccag 572
||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 508 cacctggatccaggccatcgccgtgctcttcgacggccaccgcctctacctcggcgccag 567
Query: 573 gaagacggccgcgtgggacgacgacgtcgaccgcatggagctcaccctggacggcgagcc 632
|||||| | | | |||||||||| ||||| | | ||| ||| |||||||||||||||
Sbjct: 568 gaagaccggcacctgggacgacgctgtcgagcatctagagatcatcctggacggcgagcc 627
Query: 633 cgtg 636
||||
Sbjct: 628 cgtg 631
>gb|CK200504.1|CK200504 FGAS009019 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 820
Score = 349 bits (176), Expect = 3e-094
Identities = 317/364 (87%)
Strand = Plus / Plus
Query: 273 gatggagtgccccgccgagtgttcccagtcatgctacgccgactgcagctcctgcaaacc 332
|||||| ||||||||| | || ||||||| |||||||||||||||| || ||||||||
Sbjct: 363 gatggactgccccgccaactgcccccagtcctgctacgccgactgcaaatcatgcaaacc 422
Query: 333 cgtctgcgtgtgcagcgtgccgggggcgtgcggcgacccgcgcttcatcggcggcgacgg 392
|||||||||||||| | ||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 423 cgtctgcgtgtgcaacaccccgggggcgtgcggcgacccgcggttcataggcggtgacgg 482
Query: 393 caacgccttctacttccacggccgccgggacgccgacttctgcgtgctctccgaccgcga 452
||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||
Sbjct: 483 caacgccttctacttccacggacgcagggacgccgacttctgcgtcgtctccgaccgtga 542
Query: 453 cctccacatcaacgcgcacttcatcggcaagcacggcgccgacggcatgtcccgggactt 512
||| ||||||||||| ||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 543 ccttcacatcaacgcacacttcatcggcaagagcggccacagcggcatgtcccgggactt 602
Query: 513 cacgtggatccaggccatcgccgtgctcttcgacggccacgagctctacgtcggcgccag 572
||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 603 cacctggatccaggccatcgccgtgctcttcgacggccaccgcctctacctcggcgccag 662
Query: 573 gaagacggccgcgtgggacgacgacgtcgaccgcatggagctcaccctggacggcgagcc 632
|||||| | | | |||||||||| ||||| | | ||| ||| |||||||||||||||
Sbjct: 663 gaagaccggcacctgggacgacgctgtcgagcatctagagatcatcctggacggcgagcc 722
Query: 633 cgtg 636
||||
Sbjct: 723 cgtg 726
>gb|CK194135.1|CK194135 FGAS002554 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 808
Score = 345 bits (174), Expect = 5e-093
Identities = 312/358 (87%)
Strand = Plus / Plus
Query: 274 atggagtgccccgccgagtgttcccagtcatgctacgccgactgcagctcctgcaaaccc 333
||||| ||||||||| | || ||||||| |||||| ||||||||| | | |||||||||
Sbjct: 359 atggactgccccgccaactgcccccagtcctgctaccccgactgcaacacatgcaaaccc 418
Query: 334 gtctgcgtgtgcagcgtgccgggggcgtgcggcgacccgcgcttcatcggcggcgacggc 393
|||||||| |||| | ||||||||||||||||||||||| ||||| || || ||||||
Sbjct: 419 gtctgcgtctgcaacaccccgggggcgtgcggcgacccgcggttcataggtggtgacggc 478
Query: 394 aacgccttctacttccacggccgccgggacgccgacttctgcgtgctctccgaccgcgac 453
|||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||
Sbjct: 479 aacgccttctacttccacggacgcagggacgccgacttctgcgtcgtctccgaccgcgac 538
Query: 454 ctccacatcaacgcgcacttcatcggcaagcacggcgccgacggcatgtcccgggacttc 513
|| ||||||||||||||||||||||||||| |||| | |||||||||||||||||||
Sbjct: 539 cttcacatcaacgcgcacttcatcggcaagagcggccacagcggcatgtcccgggacttc 598
Query: 514 acgtggatccaggccatcgccgtgctcttcgacggccacgagctctacgtcggcgccagg 573
|| ||||||||||||||||| |||||||||||||||||| |||||| |||||||||||
Sbjct: 599 acctggatccaggccatcgctgtgctcttcgacggccaccgcctctacctcggcgccagg 658
Query: 574 aagacggccgcgtgggacgacgacgtcgaccgcatggagctcaccctggacggcgagc 631
||||| | | | |||||||||| |||||| | | |||| ||||||||||||||||||
Sbjct: 659 aagaccggcacctgggacgacgccgtcgagcacctggacatcaccctggacggcgagc 716
>gb|BQ743190.1|BQ743190 WHE4101_A11_A21ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4101_A11_A21, mRNA sequence
Length = 587
Score = 341 bits (172), Expect = 7e-092
Identities = 307/352 (87%)
Strand = Plus / Plus
Query: 274 atggagtgccccgccgagtgttcccagtcatgctacgccgactgcagctcctgcaaaccc 333
||||| ||||||||| | || ||||||| |||||| ||||||||| | | |||||||||
Sbjct: 236 atggactgccccgccaactgcccccagtcctgctaccccgactgcaacacatgcaaaccc 295
Query: 334 gtctgcgtgtgcagcgtgccgggggcgtgcggcgacccgcgcttcatcggcggcgacggc 393
|||||||| |||| | ||||||||||||||||||||||| ||||| || || ||||||
Sbjct: 296 gtctgcgtctgcaacaccccgggggcgtgcggcgacccgcggttcataggtggtgacggc 355
Query: 394 aacgccttctacttccacggccgccgggacgccgacttctgcgtgctctccgaccgcgac 453
|||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||
Sbjct: 356 aacgccttctacttccacggacgcagggacgccgacttctgcgtcgtctccgaccgcgac 415
Query: 454 ctccacatcaacgcgcacttcatcggcaagcacggcgccgacggcatgtcccgggacttc 513
|| ||||||||||||||||||||||||||| |||| | |||||||||||||||||||
Sbjct: 416 cttcacatcaacgcgcacttcatcggcaagagcggccacagcggcatgtcccgggacttc 475
Query: 514 acgtggatccaggccatcgccgtgctcttcgacggccacgagctctacgtcggcgccagg 573
|| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 476 acctggatccaggccatcgccgtgctcttcgacggccaccgcctctacctcggcgccagg 535
Query: 574 aagacggccgcgtgggacgacgacgtcgaccgcatggagctcaccctggacg 625
||||| | | | |||||||||| |||||| | | |||| ||||||||||||
Sbjct: 536 aagaccggcacctgggacgacgccgtcgagcacctggacatcaccctggacg 587
>gb|CD877614.1|CD877614 AZO4.100L12F010925 AZO4 Triticum aestivum cDNA clone AZO4100L12,
mRNA sequence
Length = 507
Score = 280 bits (141), Expect = 2e-073
Identities = 249/285 (87%)
Strand = Plus / Plus
Query: 352 ccgggggcgtgcggcgacccgcgcttcatcggcggcgacggcaacgccttctacttccac 411
||||||||| ||||||||||||| ||||| || || ||||||||||||||||||||||||
Sbjct: 25 ccgggggcgggcggcgacccgcggttcataggtggtgacggcaacgccttctacttccac 84
Query: 412 ggccgccgggacgccgacttctgcgtgctctccgaccgcgacctccacatcaacgcgcac 471
|| ||| |||||||||||||||||| |||||||||| ||||| |||||||||||||||
Sbjct: 85 ggacgcacggacgccgacttctgcgtcgtctccgaccgggaccttcacatcaacgcgcac 144
Query: 472 ttcatcggcaagcacggcgccgacggcatgtcccgggacttcacgtggatccaggccatc 531
|||||||||||| |||| | ||||||||| ||||||||||| |||||||||||||||
Sbjct: 145 ttcatcggcaagagcggccacagcggcatgtcacgggacttcacctggatccaggccatc 204
Query: 532 gccgtgctcttcgacggccacgagctctacgtcggcgccaggaagacggccgcgtgggac 591
|||| |||||||||||||||| |||||| |||||||||||||||| | | | ||||||
Sbjct: 205 gccgggctcttcgacggccaccgcctctacctcggcgccaggaagaccggcacctgggac 264
Query: 592 gacgacgtcgaccgcatggagctcaccctggacggcgagcccgtg 636
|||| |||||| | | | ||| ||| |||||||||||||||||||
Sbjct: 265 gacgccgtcgagcacctcgagatcatcctggacggcgagcccgtg 309
Score = 115 bits (58), Expect = 8e-024
Identities = 121/142 (85%)
Strand = Plus / Plus
Query: 687 gctgtccgtcacccgcaccagcgcggccaacggcgtgctcgtctcgctcgacggcaggtt 746
||||||||| |||||||||| |||||||||||||||||| || | |||||||| | |||
Sbjct: 366 gctgtccgtgacccgcaccaaggcggccaacggcgtgctcatcaccctcgacggaaagtt 425
Query: 747 caccatcagggccaacgccgtgcccatcacagaggaggagtccagggtgcaccggtacgg 806
|| | ||||||||||||||| |||||||| |||| || || ||||||||||| || ||
Sbjct: 426 cagcgtcagggccaacgccgggcccatcaacaaggaagaatcgagggtgcaccgctaagg 485
Query: 807 cgtcacggccgacgactgcctc 828
|||||| ||||| |||||||||
Sbjct: 486 cgtcaccgccgaagactgcctc 507
>gb|CA650372.1|CA650372 wre1n.pk0152.e6 wre1n Triticum aestivum cDNA clone wre1n.pk0152.e6
5' end, mRNA sequence
Length = 500
Score = 246 bits (124), Expect = 3e-063
Identities = 196/220 (89%)
Strand = Plus / Plus
Query: 376 ttcatcggcggcgacggcaacgccttctacttccacggccgccgggacgccgacttctgc 435
||||| ||||| |||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 5 ttcataggcggtgacggcaacgccttctacttccacggacgcagggacgccgacttctgc 64
Query: 436 gtgctctccgaccgcgacctccacatcaacgcgcacttcatcggcaagcacggcgccgac 495
|| |||||||||| ||||| ||||||||||| ||||||||||||||| |||| | |
Sbjct: 65 gtcgtctccgaccgtgaccttcacatcaacgcacacttcatcggcaagagcggccacagc 124
Query: 496 ggcatgtcccgggacttcacgtggatccaggccatcgccgtgctcttcgacggccacgag 555
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 125 ggcatgtcccgggacttcacctggatccaggccatcgccgtgctcttcgacggccaccgc 184
Query: 556 ctctacgtcggcgccaggaagacggccgcgtgggacgacg 595
|||||| |||||||||||||||| | | | ||||||||||
Sbjct: 185 ctctacctcggcgccaggaagaccggcacctgggacgacg 224
Score = 83.8 bits (42), Expect = 3e-014
Identities = 112/135 (82%), Gaps = 1/135 (0%)
Strand = Plus / Plus
Query: 687 gctgtccgtcacccgcaccagcgcggccaacggcgtgctcgtctcgctcgacggcaggtt 746
|||||| || |||||||||| | |||||| |||||||||||| | ||| |||| | |
Sbjct: 324 gctgtctgtgacccgcaccaagggggccaatggcgtgctcgtcgccctccacggaaant- 382
Query: 747 caccatcagggccaacgccgtgcccatcacagaggaggagtccagggtgcaccggtacgg 806
|| | |||||||||||||||||||||||| || || || |||||||||||||| |||||
Sbjct: 383 cagcgtcagggccaacgccgtgcccatcaacgaagangattccagggtgcaccgttacgg 442
Query: 807 cgtcacggccgacga 821
||||| ||||||||
Sbjct: 443 ngtcaccgccgacga 457
>gb|CK204531.1|CK204531 FGAS013067 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 815
Score = 135 bits (68), Expect = 9e-030
Identities = 106/119 (89%)
Strand = Plus / Plus
Query: 366 cgacccgcgcttcatcggcggcgacggcaacgccttctacttccacggccgccgggacgc 425
||||||||||||| | ||||||||||||||| ||| ||||||||||||| |||||||
Sbjct: 488 cgacccgcgcttcgtgggcggcgacggcaacaagttcctcttccacggccgcagggacgc 547
Query: 426 cgacttctgcgtgctctccgaccgcgacctccacatcaacgcgcacttcatcggcaagc 484
|||||||||| ||||||||||| | |||| ||||||||||||||||||||||||||||
Sbjct: 548 cgacttctgcctgctctccgacgccnacctgcacatcaacgcgcacttcatcggcaagc 606
>gb|BE518372.1|BE518372 WHE0815_H07_P13ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0815_H07_P13, mRNA sequence
Length = 519
Score = 133 bits (67), Expect = 3e-029
Identities = 106/119 (89%)
Strand = Plus / Plus
Query: 366 cgacccgcgcttcatcggcggcgacggcaacgccttctacttccacggccgccgggacgc 425
||||||||||||| | ||||||||||||||| ||| ||||||||||||| |||||||
Sbjct: 110 cgacccgcgcttcgtgggcggcgacggcaacaagttcctcttccacggccgcagggacgc 169
Query: 426 cgacttctgcgtgctctccgaccgcgacctccacatcaacgcgcacttcatcggcaagc 484
|||||||||| ||||||||||| | |||| ||||||||||||||||||||||||||||
Sbjct: 170 cgacttctgcctgctctccgacaccaacctgcacatcaacgcgcacttcatcggcaagc 228
Score = 46.1 bits (23), Expect = 0.006
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 685 gcgctgtccgtcacccgcaccagcgcggccaacggcgtg 723
|||||||||||| ||||| | |||||||||||||||||
Sbjct: 426 gcgctgtccgtcttccgcatcggcgcggccaacggcgtg 464
>gb|CK200217.1|CK200217 FGAS008726 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 844
Score = 125 bits (63), Expect = 8e-027
Identities = 116/131 (88%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 790 agggtgcaccggtacggcgtcacggccgacgactgcctcgcgcaccttgacctggccttc 849
||||||||||| ||||||||||| ||||||||||||||||||||||| || ||| | |||
Sbjct: 657 agggtgcaccgttacggcgtcaccgccgacgactgcctcgcgcacctcgagctg-cgttc 599
Query: 850 aagt-tcggcgcgctcaccgccgacgtgcacggcgtggtcggccagacgtaccgctccga 908
| | ||| ||||||||||| |||||| ||||| |||||||| |||||||||||||||||
Sbjct: 598 agctatcgacgcgctcaccgacgacgtccacggtgtggtcggacagacgtaccgctccga 539
Query: 909 ctacgtcaacc 919
||||||||||
Sbjct: 538 atacgtcaacc 528
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1079 tcacctgtgccagtggcatgggtggccaaggcgtggtgtgcaagaagtaa 1128
||||||||||||||||||||| ||| | || || |||||||||||||||
Sbjct: 374 tcacctgtgccagtggcatggacggcaagggtgtcgtgtgcaagaagtaa 325
>gb|CD872355.1|CD872355 AZO2.120H03F010209 AZO2 Triticum aestivum cDNA clone AZO2120H03,
mRNA sequence
Length = 704
Score = 111 bits (56), Expect = 1e-022
Identities = 107/124 (86%)
Strand = Plus / Plus
Query: 359 cgtgcggcgacccgcgcttcatcggcggcgacggcaacgccttctacttccacggccgcc 418
||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 385 cgtgcggcgacccgcgcttcaccggcggcgacggcaacaacttctacttccacggcaaga 444
Query: 419 gggacgccgacttctgcgtgctctccgaccgcgacctccacatcaacgcgcacttcatcg 478
| || ||||||||| | ||||||||| |||||||||||||||||| ||||||||||
Sbjct: 445 agaaccaggacttctgcatcctctccgacgacgacctccacatcaacgcccacttcatcg 504
Query: 479 gcaa 482
||||
Sbjct: 505 gcaa 508
>gb|BQ483971.1|BQ483971 WHE3514_H12_O24ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3514_H12_O24, mRNA sequence
Length = 775
Score = 103 bits (52), Expect = 3e-020
Identities = 187/232 (80%)
Strand = Plus / Plus
Query: 685 gcgctgtccgtcacccgcaccagcgcggccaacggcgtgctcgtctcgctcgacggcagg 744
|||||||||||| ||||| | ||||||||||||||||| | || ||||||||| ||
Sbjct: 51 gcgctgtccgtcttccgcatcggcgcggccaacggcgtggtggtgcgcctcgacggccgg 110
Query: 745 ttcaccatcagggccaacgccgtgcccatcacagaggaggagtccagggtgcaccggtac 804
||| |||| |||||||| ||||| | || |||||||| || ||||| ||| |||
Sbjct: 111 ttccgcatcgtcgccaacgcggtgccggtgactgaggaggactcgagggtccacgactac 170
Query: 805 ggcgtcacggccgacgactgcctcgcgcaccttgacctggccttcaagttcggcgcgctc 864
||| |||| ||||||||| ||||||||||||| || | || ||||||||| | | ||
Sbjct: 171 ggcctcaccgccgacgacagcctcgcgcacctcaacgtcgcattcaagttcaactccatc 230
Query: 865 accgccgacgtgcacggcgtggtcggccagacgtaccgctccgactacgtca 916
| ||||||||||||||||||| |||||||||| |||||| | ||||||||||
Sbjct: 231 agcgccgacgtgcacggcgtgctcggccagacctaccgcccggactacgtca 282
>gb|CA643823.1|CA643823 wre1n.pk0080.h10 wre1n Triticum aestivum cDNA clone
wre1n.pk0080.h10 5' end, mRNA sequence
Length = 488
Score = 101 bits (51), Expect = 1e-019
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 802 tacggcgtcacggccgacgactgcctcgcgcaccttgacctggccttcaagttcggcgcg 861
|||||| |||| ||||||||| ||||||||||||| || | || ||||||||| | |
Sbjct: 113 tacggcctcaccgccgacgacagcctcgcgcacctcaacgtcgcgttcaagttccactcc 172
Query: 862 ctcaccgccgacgtgcacggcgtggtcggccagacgtaccgctccgactacgtca 916
||| ||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 173 atcagcgccgacgtgcacggcgtgctcggccagacctaccgctccgactacgtca 227
>gb|BE444358.1|BE444358 WHE1118_C01_E02ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1118_C01_E02,
mRNA sequence
Length = 646
Score = 89.7 bits (45), Expect = 5e-016
Identities = 107/125 (85%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 361 tgcggcgacccgcgcttcatcggcggcgacggcaacgccttctacttccacggccgccgg 420
||||| ||||||||||||| ||||| |||||||||| |||||||||||||||| |
Sbjct: 366 tgcggtgacccgcgcttcaccggcgccgacggcaacaacttctacttccacggcaagaag 425
Query: 421 gacgccga-cttctgcgtgctctccgaccgcgacctccacatcaacgcgcacttcatcgg 479
||| | || ||||||||| |||||||| |||||||||||||||||| |||||||||||
Sbjct: 426 gac-cagagcttctgcgtcgtctccgacgccgacctccacatcaacgcccacttcatcgg 484
Query: 480 caagc 484
|||||
Sbjct: 485 caagc 489
>gb|BU099866.1|BU099866 WHE3312_D05_H10ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3312_D05_H10,
mRNA sequence
Length = 633
Score = 79.8 bits (40), Expect = 4e-013
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 359 cgtgcggcgacccgcgcttcatcggcggcgacggcaacgccttctacttccacggccgcc 418
||||||| ||||| ||||||| |||||| ||||||||| |||||||||||||||||
Sbjct: 372 cgtgcggagaccctcgcttcaccggcggggacggcaacaccttctacttccacggcaaga 431
Query: 419 gggacgccgacttctgcgtgctctccgaccgcgacctccacatcaacgcgcacttcatcg 478
|||| ||||||||| | |||||||| | ||||||||||||||| ||||||||||
Sbjct: 432 aggaccaggacttctgcatcgtctccgacgaggccctccacatcaacgcccacttcatcg 491
Query: 479 gcaa 482
||||
Sbjct: 492 gcaa 495
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 509 acttcacgtggatccaggccatcg 532
||||||||||||||||||||||||
Sbjct: 519 acttcacgtggatccaggccatcg 542
>gb|CK195199.1|CK195199 FGAS003638 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 835
Score = 73.8 bits (37), Expect = 3e-011
Identities = 105/125 (84%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 361 tgcggcgacccgcgcttcatcggcggcgacggcaacgccttctacttccacggccgccgg 420
||||| ||||||||||||| |||| |||||||||| |||||||||||||||| |
Sbjct: 482 tgcggggacccgcgcttcacgggcgccgacggcaacaacttctacttccacggcaaaaag 541
Query: 421 gacgccga-cttctgcgtgctctccgaccgcgacctccacatcaacgcgcacttcatcgg 479
||| | || |||||| ||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 542 gac-cagagcttctgtgtggtctccgacgccgatctccacatcaacgcccacttcatcgg 600
Query: 480 caagc 484
|||||
Sbjct: 601 caagc 605
>gb|BQ295218.1|BQ295218 WHE2867_E05_I09ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2867_E05_I09, mRNA sequence
Length = 597
Score = 60.0 bits (30), Expect = 4e-007
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 451 gacctccacatcaacgcgcacttcatcggcaagc 484
||||||||||||||||| ||||||||||||||||
Sbjct: 273 gacctccacatcaacgctcacttcatcggcaagc 306
>gb|BQ753058.1|BQ753058 WHE4122_E06_I12ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4122_E06_I12, mRNA sequence
Length = 695
Score = 60.0 bits (30), Expect = 4e-007
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 451 gacctccacatcaacgcgcacttcatcggcaagc 484
||||||||||||||||| ||||||||||||||||
Sbjct: 450 gacctccacatcaacgctcacttcatcggcaagc 483
>gb|CA614732.1|CA614732 wr1.pk175.f12 wr1 Triticum aestivum cDNA clone wr1.pk175.f12 5'
end, mRNA sequence
Length = 572
Score = 54.0 bits (27), Expect = 3e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 869 ccgacgtgcacggcgtggtcggccagacgtaccgc 903
||||||||||||||||| |||||||||| ||||||
Sbjct: 48 ccgacgtgcacggcgtgctcggccagacctaccgc 82
>gb|CA613525.1|CA613525 wr1.pk0152.h2 wr1 Triticum aestivum cDNA clone wr1.pk0152.h2 5' end,
mRNA sequence
Length = 287
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 1079 tcacctgtgccagtggcatgggtggccaaggcgtggtgtgcaagaagtaa 1128
||||||||||||||||||||| ||| | || || |||||||||||||||
Sbjct: 113 tcacctgtgccagtggcatggacggcaagggtgtcgtgtgcaagaagtaa 162
>gb|CD452671.1|CD452671 WHE1118_C01_E02ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1118_C01_E02,
mRNA sequence
Length = 743
Score = 52.0 bits (26), Expect = 1e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 877 cacggcgtggtcggccagacgtaccgctccgactacgtcaac 918
||||| ||| ||||||||||||||||| | ||||||||||||
Sbjct: 390 cacggagtgctcggccagacgtaccgcacggactacgtcaac 349
>gb|CA598319.1|CA598319 wyr1c.pk005.k22 wyr1c Triticum aestivum cDNA clone wyr1c.pk005.k22
5' end, mRNA sequence
Length = 466
Score = 50.1 bits (25), Expect = 4e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 188 acaaggagaaggagaaggagaagcc 212
|||||||||||||||||||||||||
Sbjct: 48 acaaggagaaggagaaggagaagcc 24
>gb|BE407052.1|BE407052 WHE0448_d06_h12zS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0448_d06_h12, mRNA
sequence
Length = 474
Score = 44.1 bits (22), Expect = 0.024
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 877 cacggcgtggtcggccagacgtaccgctccgactacgtcaac 918
||||| ||| |||||||||| |||||| | ||||||||||||
Sbjct: 409 cacggagtgctcggccagacctaccgcacggactacgtcaac 450
>gb|BJ225192.1|BJ225192 BJ225192 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl20p10 5', mRNA sequence
Length = 696
Score = 44.1 bits (22), Expect = 0.024
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaagc 211
||||||||||||||||||||||
Sbjct: 437 aaggagaaggagaaggagaagc 458
>gb|BQ484089.1|BQ484089 WHE3516_C08_F16ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3516_C08_F16, mRNA sequence
Length = 621
Score = 44.1 bits (22), Expect = 0.024
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 tcgtcctgctcgccgccgtcgc 134
||||||||||||||||||||||
Sbjct: 124 tcgtcctgctcgccgccgtcgc 145
>gb|AL825643.1|AL825643 AL825643 p:234 Triticum aestivum cDNA clone A09_p234_plate_14, mRNA
sequence
Length = 526
Score = 44.1 bits (22), Expect = 0.024
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 361 tgcggcgacccgcgcttcatcggcggcgacggcaacgccttctacttccacggc 414
||||| ||||||||||||| |||| || |||||| ||||||||||||||||
Sbjct: 296 tgcggggacccgcgcttcacgggcgctgatggcaacaacttctacttccacggc 349
Score = 42.1 bits (21), Expect = 0.096
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 440 tctccgaccgcgacctccacatcaacgcgcacttcatcggcaagc 484
|||||||| ||| ||||| |||||||| ||||||||||| ||||
Sbjct: 375 tctccgacgccgatctccagatcaacgcccacttcatcgggaagc 419
>gb|CD926020.1|CD926020 G750.119L23F010711 G750 Triticum aestivum cDNA clone G750119L23,
mRNA sequence
Length = 352
Score = 44.1 bits (22), Expect = 0.024
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaagc 211
||||||||||||||||||||||
Sbjct: 93 aaggagaaggagaaggagaagc 114
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 141 aaggagaaggagaaggagaag 161
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 135 aaggagaaggagaaggagaag 155
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 129 aaggagaaggagaaggagaag 149
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 123 aaggagaaggagaaggagaag 143
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 117 aaggagaaggagaaggagaag 137
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 51 aaggagaaggagaaggagaag 71
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 45 aaggagaaggagaaggagaag 65
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 39 aaggagaaggagaaggagaag 59
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 33 aaggagaaggagaaggagaag 53
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 27 aaggagaaggagaaggagaag 47
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 21 aaggagaaggagaaggagaag 41
>gb|CK207395.1|CK207395 FGAS019016 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1103
Score = 44.1 bits (22), Expect = 0.024
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 tcgtcctgctcgccgccgtcgc 134
||||||||||||||||||||||
Sbjct: 111 tcgtcctgctcgccgccgtcgc 132
>gb|BE443370.1|BE443370 WHE1104_H10_P20ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1104_H10_P20,
mRNA sequence
Length = 612
Score = 42.1 bits (21), Expect = 0.096
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 757 gccaacgccgtgcccatcacagaggagga 785
|||||||||||||||||||| || |||||
Sbjct: 208 gccaacgccgtgcccatcactgacgagga 236
>gb|BF201899.1|BF201899 WHE1759-1762_B22_B22ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE1759-1762_B22_B22, mRNA
sequence
Length = 516
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 122 tcgccgccgtcgcggccactg 142
|||||||||||||||||||||
Sbjct: 50 tcgccgccgtcgcggccactg 70
>gb|CA743799.1|CA743799 wri1s.pk005.p2 wri1s Triticum aestivum cDNA clone wri1s.pk005.p2 5'
end, mRNA sequence
Length = 617
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 241 aaggagaaggagaaggagaag 261
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 109 aaggagaaggagaaggagaag 129
>gb|CD452458.1|CD452458 WHE1104_H10_P20ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1104_H10_P20,
mRNA sequence
Length = 706
Score = 42.1 bits (21), Expect = 0.096
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 757 gccaacgccgtgcccatcacagaggagga 785
|||||||||||||||||||| || |||||
Sbjct: 531 gccaacgccgtgcccatcactgacgagga 503
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence
Length = 187012
Score = 42.1 bits (21), Expect = 0.096
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 129792 aaggagaaggagaaggagaag 129772
>gb|BE423519.1|BE423519 WHE0071_G11_M21ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0071_G11_M21, mRNA sequence
Length = 539
Score = 40.1 bits (20), Expect = 0.38
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 188 acaaggagaaggagaaggagaagc 211
|||||||||| |||||||||||||
Sbjct: 212 acaaggagaatgagaaggagaagc 189
>gb|BE492104.1|BE492104 WHE0551_F09_F09ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0551_F09_F09, mRNA
sequence
Length = 520
Score = 40.1 bits (20), Expect = 0.38
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 188 acaaggagaaggagaaggagaagc 211
|||||||||| |||||||||||||
Sbjct: 305 acaaggagaatgagaaggagaagc 328
>gb|BG262519.1|BG262519 WHE0936_H09_P18ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0936_H09_P18, mRNA sequence
Length = 418
Score = 40.1 bits (20), Expect = 0.38
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 188 acaaggagaaggagaaggagaagc 211
|||||||||| |||||||||||||
Sbjct: 276 acaaggagaatgagaaggagaagc 299
>gb|BJ229428.1|BJ229428 BJ229428 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl19l08 3', mRNA sequence
Length = 576
Score = 40.1 bits (20), Expect = 0.38
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 191 aggagaaggagaaggagaag 210
||||||||||||||||||||
Sbjct: 479 aggagaaggagaaggagaag 498
>gb|BJ259624.1|BJ259624 BJ259624 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21j04 5', mRNA sequence
Length = 633
Score = 40.1 bits (20), Expect = 0.38
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 188 acaaggagaaggagaaggagaagc 211
|||||||||| |||||||||||||
Sbjct: 207 acaaggagaatgagaaggagaagc 230
>gb|BJ265336.1|BJ265336 BJ265336 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21j04 3', mRNA sequence
Length = 614
Score = 40.1 bits (20), Expect = 0.38
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 188 acaaggagaaggagaaggagaagc 211
|||||||||| |||||||||||||
Sbjct: 409 acaaggagaatgagaaggagaagc 386
>gb|BJ269171.1|BJ269171 BJ269171 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh20k24 5', mRNA sequence
Length = 648
Score = 40.1 bits (20), Expect = 0.38
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 191 aggagaaggagaaggagaag 210
||||||||||||||||||||
Sbjct: 390 aggagaaggagaaggagaag 371
>gb|BJ274116.1|BJ274116 BJ274116 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh20k24 3', mRNA sequence
Length = 686
Score = 40.1 bits (20), Expect = 0.38
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 191 aggagaaggagaaggagaag 210
||||||||||||||||||||
Sbjct: 456 aggagaaggagaaggagaag 475
>gb|BJ289694.1|BJ289694 BJ289694 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl6k10 5', mRNA sequence
Length = 748
Score = 40.1 bits (20), Expect = 0.38
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 188 acaaggagaaggagaaggagaagc 211
|||||||||| |||||||||||||
Sbjct: 382 acaaggagaatgagaaggagaagc 405
>gb|BJ296025.1|BJ296025 BJ296025 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl6k10 3', mRNA sequence
Length = 712
Score = 40.1 bits (20), Expect = 0.38
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 188 acaaggagaaggagaaggagaagc 211
|||||||||| |||||||||||||
Sbjct: 332 acaaggagaatgagaaggagaagc 309
>gb|BQ166904.1|BQ166904 WHE0941_A11_A21ZT Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0941_A11_A21, mRNA sequence
Length = 498
Score = 40.1 bits (20), Expect = 0.38
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 188 acaaggagaaggagaaggagaagc 211
|||||||||| |||||||||||||
Sbjct: 448 acaaggagaatgagaaggagaagc 425
>gb|BQ237007.1|BQ237007 TaE05023F09F TaE05 Triticum aestivum cDNA clone TaE05023F09F, mRNA
sequence
Length = 512
Score = 40.1 bits (20), Expect = 0.38
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 188 acaaggagaaggagaaggagaagc 211
|||||||||| |||||||||||||
Sbjct: 424 acaaggagaatgagaaggagaagc 401
>gb|BQ238161.1|BQ238161 TaE05007G05F TaE05 Triticum aestivum cDNA clone TaE05007G05F, mRNA
sequence
Length = 512
Score = 40.1 bits (20), Expect = 0.38
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 188 acaaggagaaggagaaggagaagc 211
|||||||||| |||||||||||||
Sbjct: 425 acaaggagaatgagaaggagaagc 402
>gb|BQ238315.1|BQ238315 TaE05005G01F TaE05 Triticum aestivum cDNA clone TaE05005G01F, mRNA
sequence
Length = 587
Score = 40.1 bits (20), Expect = 0.38
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 188 acaaggagaaggagaaggagaagc 211
|||||||||| |||||||||||||
Sbjct: 402 acaaggagaatgagaaggagaagc 379
>gb|BQ802954.1|BQ802954 WHE2832_A06_B12ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2832_A06_B12, mRNA
sequence
Length = 782
Score = 40.1 bits (20), Expect = 0.38
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 188 acaaggagaaggagaaggagaagc 211
|||||||||| |||||||||||||
Sbjct: 367 acaaggagaatgagaaggagaagc 390
>gb|CA603765.1|CA603765 wr1.pk0032.h2 wr1 Triticum aestivum cDNA clone wr1.pk0032.h2 5'
end, mRNA sequence
Length = 224
Score = 40.1 bits (20), Expect = 0.38
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 367 gacccgcgcttcatcggcggcgacggcaacgccttctacttcca 410
|||||||| |||| || |||||||||||| ||||||| |||||
Sbjct: 70 gacccgcggttcacagggggcgacggcaacaccttctatttcca 113
>gb|CA607116.1|CA607116 wr1.pk0074.e8 wr1 Triticum aestivum cDNA clone wr1.pk0074.e8 5'
end, mRNA sequence
Length = 500
Score = 40.1 bits (20), Expect = 0.38
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 191 aggagaaggagaaggagaag 210
||||||||||||||||||||
Sbjct: 125 aggagaaggagaaggagaag 106
>gb|CA631084.1|CA631084 wle1n.pk0043.g12 wle1n Triticum aestivum cDNA clone
wle1n.pk0043.g12 5' end, mRNA sequence
Length = 579
Score = 40.1 bits (20), Expect = 0.38
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 191 aggagaaggagaaggagaag 210
||||||||||||||||||||
Sbjct: 395 aggagaaggagaaggagaag 376
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 395,835
Number of Sequences: 636343
Number of extensions: 395835
Number of successful extensions: 131542
Number of sequences better than 0.5: 75
Number of HSP's better than 0.5 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131272
Number of HSP's gapped (non-prelim): 212
length of query: 1318
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1298
effective length of database: 354,513,379
effective search space: 460158365942
effective search space used: 460158365942
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)