BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8028975.2.1
(595 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ252403.1|BJ252403 BJ252403 Y. Ogihara unpublished cDNA... 153 2e-035
gb|BQ161858.1|BQ161858 WHE0483-0486_N10_N10ZT Wheat Fusariu... 153 2e-035
gb|CA695553.1|CA695553 wlmk8.pk0011.c4 wlmk8 Triticum aesti... 153 2e-035
gb|CA742677.1|CA742677 wri1s.pk001.p1 wri1s Triticum aestiv... 153 2e-035
gb|CV768805.1|CV768805 FGAS063196 Triticum aestivum FGAS: L... 153 2e-035
gb|BM137713.1|BM137713 WHE0483-0486_N10_N10ZS Wheat Fusariu... 145 4e-033
gb|BJ321553.1|BJ321553 BJ321553 Y. Ogihara unpublished cDNA... 145 4e-033
gb|CD872195.1|CD872195 AZO2.120B05F010209 AZO2 Triticum aes... 145 4e-033
gb|CD872196.1|CD872196 AZO2.120B05R010405 AZO2 Triticum aes... 145 4e-033
gb|CD876518.1|CD876518 AZO3.110A21R011127 AZO3 Triticum aes... 145 4e-033
gb|BQ902693.1|BQ902693 Ta03_08b06_R Ta03_AAFC_ECORC_Fusariu... 133 2e-029
gb|CD913544.1|CD913544 G550.118D19F010713 G550 Triticum aes... 131 6e-029
gb|CV780901.1|CV780901 FGAS075312 Triticum aestivum FGAS: L... 131 6e-029
gb|DN829051.1|DN829051 KUCD01_09_G10_T3 WSWR cDNA library T... 121 6e-026
gb|CD913545.1|CD913545 G550.118D19R010921 G550 Triticum aes... 117 9e-025
gb|CV762094.1|CV762094 FGAS056483 Triticum aestivum FGAS: L... 113 1e-023
gb|CD874575.1|CD874575 AZO3.102I08F011001 AZO3 Triticum aes... 109 2e-022
gb|BJ285172.1|BJ285172 BJ285172 Y. Ogihara unpublished cDNA... 103 1e-020
gb|BQ903934.1|BQ903934 Ta03_16h01_R Ta03_AAFC_ECORC_Fusariu... 98 8e-019
gb|BJ246472.1|BJ246472 BJ246472 Y. Ogihara unpublished cDNA... 88 8e-016
gb|BE516214.1|BE516214 WHE0608_E03_J06ZA Wheat ABA-treated ... 86 3e-015
gb|CA745862.1|CA745862 wri2s.pk003.f4 wri2s Triticum aestiv... 86 3e-015
gb|CD880088.1|CD880088 AZO5.001H17R010131 AZO5 Triticum aes... 86 3e-015
gb|CV778388.1|CV778388 FGAS072796 Triticum aestivum FGAS: L... 86 3e-015
gb|CA700103.1|CA700103 wkm1c.pk0003.b9 wkm1c Triticum aesti... 84 1e-014
gb|CK206530.1|CK206530 FGAS018128 Triticum aestivum FGAS: L... 70 2e-010
gb|CA679576.1|CA679576 wlm4.pk0017.g3 wlm4 Triticum aestivu... 58 7e-007
gb|AL820601.1|AL820601 AL820601 O:232 Triticum aestivum cDN... 42 0.043
gb|AY693801.1| Triticum aestivum clone C05_O232_plate 15 CE... 42 0.043
>gb|BJ252403.1|BJ252403 BJ252403 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24d03 3', mRNA sequence
Length = 756
Score = 153 bits (77), Expect = 2e-035
Identities = 149/173 (86%)
Strand = Plus / Minus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 603 attgaagtttggcaggtaaaagccggttcggtttttgacaacattctcatttgcgatgac 544
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | ||||||||||||||||||||||
Sbjct: 543 ccggagtatgcaaaacaggttgctgatgaaacatggggtgcaaataaggaggctgaaaag 484
Query: 134 gaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagc 186
||||| ||||||| |||||||| ||||||| ||||||||||| |||||||
Sbjct: 483 gaggcttttgaagaagctgaaaaggagaggaaagctagagaagacaaggaagc 431
>gb|BQ161858.1|BQ161858 WHE0483-0486_N10_N10ZT Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE0483-0486_N10_N10, mRNA sequence
Length = 678
Score = 153 bits (77), Expect = 2e-035
Identities = 149/173 (86%)
Strand = Plus / Minus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 661 attgaagtttggcaggtaaaagccggttcggtttttgacaacattctcatttgcgatgac 602
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | ||||||||||||||||||||||
Sbjct: 601 ccggagtatgcaaaacaggttgctgatgaaacatggggtgcaaataaggaggctgaaaag 542
Query: 134 gaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagc 186
||||| ||||||| |||||||| ||||||| ||||||||||| |||||||
Sbjct: 541 gaggcttttgaagaagctgaaaaggagaggaaagctagagaagacaaggaagc 489
>gb|CA695553.1|CA695553 wlmk8.pk0011.c4 wlmk8 Triticum aestivum cDNA clone wlmk8.pk0011.c4
5' end, mRNA sequence
Length = 667
Score = 153 bits (77), Expect = 2e-035
Identities = 149/173 (86%)
Strand = Plus / Minus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 433 attgaagtttggcaggtaaaagccggttcggtttttgacaacattctcatttgcgatgac 374
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | ||||||||||||||||||||||
Sbjct: 373 ccggagtatgcaaaacaggttgctgatgaaacatggggtgcaaataaggaggctgaaaag 314
Query: 134 gaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagc 186
||||| ||||||| |||||||| ||||||| ||||||||||| |||||||
Sbjct: 313 gaggcttttgaagaagctgaaaaggagaggaaagctagagaagacaaggaagc 261
>gb|CA742677.1|CA742677 wri1s.pk001.p1 wri1s Triticum aestivum cDNA clone wri1s.pk001.p1 5'
end, mRNA sequence
Length = 542
Score = 153 bits (77), Expect = 2e-035
Identities = 149/173 (86%)
Strand = Plus / Minus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 512 attgaagtttggcaggtaaaagccggttcggtttttgacaacattctcatttgcgatgac 453
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | ||||||||||||||||||||||
Sbjct: 452 ccggagtatgcaaaacaggttgccgatgaaacatggggtgcaaataaggaggctgaaaag 393
Query: 134 gaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagc 186
||||| ||||||| |||||||| ||||||| ||||||||||| |||||||
Sbjct: 392 gaggcttttgaagaagctgaaaaggagaggaaagctagagaagacaaggaagc 340
>gb|CV768805.1|CV768805 FGAS063196 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 832
Score = 153 bits (77), Expect = 2e-035
Identities = 149/173 (86%)
Strand = Plus / Plus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 297 attgaagtttggcaggtaaaagccggttcggtttttgacaacattctcatttgcgatgac 356
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | ||||||||||||||||||||||
Sbjct: 357 ccggagtatgcaaaacaggttgccgatgaaacatggggtgcaaataaggaggctgaaaag 416
Query: 134 gaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagc 186
||||| ||||||| |||||||| ||||||| ||||||||||| |||||||
Sbjct: 417 gaggcttttgaagaagctgaaaaggagaggaaagctagagaagacaaggaagc 469
>gb|BM137713.1|BM137713 WHE0483-0486_N10_N10ZS Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE0483-0486_N10_N10, mRNA sequence
Length = 421
Score = 145 bits (73), Expect = 4e-033
Identities = 148/173 (85%)
Strand = Plus / Plus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| | ||| ||||||||||||||| | ||||||||||||
Sbjct: 22 attgaagtttggcaggtaaaagccgcttcggtttttgacaacattctcatttgcgatgac 81
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | ||||||||||||||||||||||
Sbjct: 82 ccggagtatgcaaaacaggttgctgatgaaacatggggtgcaaataaggaggctgaaaag 141
Query: 134 gaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagc 186
||||| ||||||| |||||||| ||||||| ||||||||||| |||||||
Sbjct: 142 gaggcttttgaagaagctgaaaaggagaggaaagctagagaagacaaggaagc 194
>gb|BJ321553.1|BJ321553 BJ321553 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf21g07 3', mRNA sequence
Length = 715
Score = 145 bits (73), Expect = 4e-033
Identities = 148/173 (85%)
Strand = Plus / Minus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| || ||||| |||||||||||| | ||||||||||||
Sbjct: 606 attgaagtttggcaggtaaaagccggctcagtatttgacaacattctcatttgcgatgac 547
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | ||||||||||||||||||||||
Sbjct: 546 ccggaatatgcaaaacaggttgccgatgaaacatggggtgcaaataaggaggctgaaaag 487
Query: 134 gaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagc 186
||||| ||||||| |||||||| ||||||| ||||||||||| |||||||
Sbjct: 486 gaggcttttgaagaagctgaaaaggagaggaaagctagagaagataaggaagc 434
>gb|CD872195.1|CD872195 AZO2.120B05F010209 AZO2 Triticum aestivum cDNA clone AZO2120B05,
mRNA sequence
Length = 703
Score = 145 bits (73), Expect = 4e-033
Identities = 148/173 (85%)
Strand = Plus / Plus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| || ||||| |||||||||||| | ||||||||||||
Sbjct: 488 attgaagtttggcaggtaaaagccggctcagtatttgacaacattctcatttgcgatgac 547
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | ||||||||||||||||||||||
Sbjct: 548 ccggaatatgcaaaacaggttgccgatgaaacatggggtgcaaataaggaggctgaaaag 607
Query: 134 gaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagc 186
||||| ||||||| |||||||| ||||||| ||||||||||| |||||||
Sbjct: 608 gaggcttttgaagaagctgaaaaggagaggaaagctagagaagataaggaagc 660
>gb|CD872196.1|CD872196 AZO2.120B05R010405 AZO2 Triticum aestivum cDNA clone AZO2120B05,
mRNA sequence
Length = 710
Score = 145 bits (73), Expect = 4e-033
Identities = 148/173 (85%)
Strand = Plus / Minus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| || ||||| |||||||||||| | ||||||||||||
Sbjct: 613 attgaagtttggcaggtaaaagccggctcagtatttgacaacattctcatttgcgatgac 554
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | ||||||||||||||||||||||
Sbjct: 553 ccggaatatgcaaaacaggttgccgatgaaacatggggtgcaaataaggaggctgaaaag 494
Query: 134 gaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagc 186
||||| ||||||| |||||||| ||||||| ||||||||||| |||||||
Sbjct: 493 gaggcttttgaagaagctgaaaaggagaggaaagctagagaagataaggaagc 441
>gb|CD876518.1|CD876518 AZO3.110A21R011127 AZO3 Triticum aestivum cDNA clone AZO3110A21,
mRNA sequence
Length = 638
Score = 145 bits (73), Expect = 4e-033
Identities = 148/173 (85%)
Strand = Plus / Minus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| || ||||| |||||||||||| | ||||||||||||
Sbjct: 623 attgaagtttggcaggtaaaagccggctcagtatttgacaacattctcatttgcgatgac 564
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | ||||||||||||||||||||||
Sbjct: 563 ccggaatatgcaaaacaggttgccgatgaaacatggggtgcaaataaggaggctgaaaag 504
Query: 134 gaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagc 186
||||| ||||||| |||||||| ||||||| ||||||||||| |||||||
Sbjct: 503 gaggcttttgaagaagctgaaaaggagaggaaagctagagaagataaggaagc 451
>gb|BQ902693.1|BQ902693 Ta03_08b06_R
Ta03_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta03_08b06, mRNA
sequence
Length = 546
Score = 133 bits (67), Expect = 2e-029
Identities = 147/173 (84%), Gaps = 1/173 (0%)
Strand = Plus / Minus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| ||||| |||||||||||||| | ||||||||||||
Sbjct: 538 attgaagtttggcaggtaaaagccggttcggtttttgacaacatctc-atttgcgatgac 480
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | |||||||||||||||||||||
Sbjct: 479 ccggagtatgcaaaacaggttgccgatgaaacatggggygcaaataaggaggctgaaaag 420
Query: 134 gaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagc 186
||||| ||||||| |||||||| ||||||| ||||||||||| |||||||
Sbjct: 419 gaggcttttgaagaagctgaaaaggagaggaaagctagagaagacaaggaagc 367
>gb|CD913544.1|CD913544 G550.118D19F010713 G550 Triticum aestivum cDNA clone G550118D19,
mRNA sequence
Length = 483
Score = 131 bits (66), Expect = 6e-029
Identities = 123/142 (86%)
Strand = Plus / Plus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| || ||||| |||||||||||| | ||||||||||||
Sbjct: 326 attgaagtttggcaggtaaaagccggctcagtatttgacaacattctcatttgcgatgac 385
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | ||||||||||||||||||||||
Sbjct: 386 ccggaatatgcaaaacaggttgccgatgaaacatggggtgcaaataaggaggctgaaaag 445
Query: 134 gaggcctttgaaggagctgaaa 155
||||| ||||||| ||||||||
Sbjct: 446 gaggcttttgaagaagctgaaa 467
>gb|CV780901.1|CV780901 FGAS075312 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 875
Score = 131 bits (66), Expect = 6e-029
Identities = 123/142 (86%)
Strand = Plus / Plus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 511 attgaagtttggcaggtaaaagccggttcggtttttgacaacattctcatttgcgatgac 570
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | ||||||||||||||||||||||
Sbjct: 571 ccggagtatgcaaaacaggttgctgatgaaacatggggtgcaaataaggaggctgaaaag 630
Query: 134 gaggcctttgaaggagctgaaa 155
||||| |||||| ||||||||
Sbjct: 631 gaggcttttgaaaaagctgaaa 652
>gb|DN829051.1|DN829051 KUCD01_09_G10_T3 WSWR cDNA library Triticum aestivum cDNA, mRNA
sequence
Length = 818
Score = 121 bits (61), Expect = 6e-026
Identities = 145/173 (83%)
Strand = Plus / Minus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| || ||||| |||||||||||| | |||| |||| |
Sbjct: 683 attgaagtttggcaggtaaaagccggctcagtatttgacaacattctcatttcagatggc 624
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | ||||||||||||||||||||||
Sbjct: 623 ccggaatatgcaaaacaggttgctgatgaaacatggggtgcaaataaggaggctgaaaag 564
Query: 134 gaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagc 186
||||| ||||||| |||||||| ||||||| ||||||||||| |||||||
Sbjct: 563 gaggcttttgaagaagctgaaaaggagaggaaagctagagaagataaggaagc 511
>gb|CD913545.1|CD913545 G550.118D19R010921 G550 Triticum aestivum cDNA clone G550118D19,
mRNA sequence
Length = 674
Score = 117 bits (59), Expect = 9e-025
Identities = 119/139 (85%)
Strand = Plus / Minus
Query: 48 ttgacaacattttgatttgcgatgacccagactatgcaagacatgttgtagatgaaactt 107
||||||||||| | |||||||||||||| || ||||||| ||| |||| |||||||| |
Sbjct: 596 ttgacaacattctcatttgcgatgacccggaatatgcaaaacaggttgccgatgaaacat 537
Query: 108 ttgctgcaaataaggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaagg 167
| ||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |
Sbjct: 536 ggggtgcaaataaggaggctgaaaaggaggcttttgaagaagctgaaaaggagaggaaag 477
Query: 168 ctagagaagaagaggaagc 186
|||||||||| |||||||
Sbjct: 476 ctagagaagataaggaagc 458
>gb|CV762094.1|CV762094 FGAS056483 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 836
Score = 113 bits (57), Expect = 1e-023
Identities = 138/164 (84%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| || ||||| |||||||||||| | ||||||||||||
Sbjct: 626 attgaagtttggcaggtaaaagccggctcagtatttgacaacattctcatttgcgatgac 685
Query: 74 ccagactatgcaagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaag 133
|| || ||||||| ||| |||| |||||||| | | ||||||||||||||||||||||
Sbjct: 686 ccggaatatgcaaaacaggttgccgatgaaacatggggtgcaaataaggaggctgaaaag 745
Query: 134 gaggcctttgaaggagctgaaagaaagaggaaggctagagaaga 177
|| | ||||| || ||||| || ||||||| |||||||||||
Sbjct: 746 ganggctttg-agaagctggaaaggagaggaaagctagagaaga 788
>gb|CD874575.1|CD874575 AZO3.102I08F011001 AZO3 Triticum aestivum cDNA clone AZO3102I08,
mRNA sequence
Length = 555
Score = 109 bits (55), Expect = 2e-022
Identities = 115/135 (85%)
Strand = Plus / Plus
Query: 52 caacattttgatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgc 111
||||||| | |||||||||||||| || ||||||| ||| |||| |||||||| | |
Sbjct: 12 caacattctcatttgcgatgacccggaatatgcaaaacaggttgccgatgaaacatgggg 71
Query: 112 tgcaaataaggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctag 171
||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||
Sbjct: 72 tgcaaataaggaggctgaaaaggaggcttttgaagaagctgaaaaggagaggaaagctag 131
Query: 172 agaagaagaggaagc 186
|||||| |||||||
Sbjct: 132 agaagataaggaagc 146
>gb|BJ285172.1|BJ285172 BJ285172 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr6o23 3', mRNA sequence
Length = 559
Score = 103 bits (52), Expect = 1e-020
Identities = 146/175 (83%), Gaps = 2/175 (1%)
Strand = Plus / Minus
Query: 14 attgaagtatggcaggtcaaagctggt-tcagtttttgacaacattttgatttgcgatga 72
|||||||| |||||||| ||||| || ||||| ||| |||||||| | |||||||||||
Sbjct: 545 attgaagtttggcaggtaaaagccgggctcagtattttacaacattctcatttgcgatga 486
Query: 73 cccagactatgcaaga-catgttgtagatgaaacttttgctgcaaataaggaggctgaaa 131
|| || ||||||| | || |||| |||||||| | | ||||||||||||||||||||
Sbjct: 485 nccggaatatgcaaaaacaggttgccgatgaaacatggggtgcaaataaggaggctgaaa 426
Query: 132 aggaggcctttgaaggagctgaaagaaagaggaaggctagagaagaagaggaagc 186
||||||| ||||||| |||||||| ||||||| ||||||||||| |||||||
Sbjct: 425 aggaggcttttgaagaagctgaaaaggagaggaaagctagagaagataaggaagc 371
>gb|BQ903934.1|BQ903934 Ta03_16h01_R
Ta03_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta03_16h01, mRNA
sequence
Length = 432
Score = 97.6 bits (49), Expect = 8e-019
Identities = 113/135 (83%)
Strand = Plus / Minus
Query: 52 caacattttgatttgcgatgacccagactatgcaagacatgttgtagatgaaacttttgc 111
||||||| | |||||||||| ||| || ||||||| ||| |||| |||||||| | |
Sbjct: 432 caacattctcatttgcgatgmcccggaatatgcaaaacaggttgccgatgaaacatgggg 373
Query: 112 tgcaaataaggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctag 171
||||||||||||| ||||||||||||| ||||||| |||||||| ||||||| |||||
Sbjct: 372 tgcaaataaggagactgaaaaggaggcttttgaagaagctgaaaaggagaggaaagctag 313
Query: 172 agaagaagaggaagc 186
|||||| |||||||
Sbjct: 312 agaagataaggaagc 298
>gb|BJ246472.1|BJ246472 BJ246472 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24d03 5', mRNA sequence
Length = 472
Score = 87.7 bits (44), Expect = 8e-016
Identities = 80/92 (86%)
Strand = Plus / Plus
Query: 14 attgaagtatggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgac 73
|||||||| |||||||| ||||| ||||| ||||||||||||||| | ||||||||||||
Sbjct: 379 attgaagtttggcaggtaaaagccggttcggtttttgacaacattctcatttgcgatgac 438
Query: 74 ccagactatgcaagacatgttgtagatgaaac 105
|| || ||||||| ||| |||| ||||||||
Sbjct: 439 ccggagtatgcaaaacaggttgctgatgaaac 470
>gb|BE516214.1|BE516214 WHE0608_E03_J06ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0608_E03_J06, mRNA sequence
Length = 381
Score = 85.7 bits (43), Expect = 3e-015
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 112 tgcaaataaggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctag 171
||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||
Sbjct: 341 tgcaaataaggaggctgaaaaggaggcttttgaagaagctgaaaaggagaggaaagctag 282
Query: 172 agaagaagaggaagc 186
|||||| |||||||
Sbjct: 281 agaagacaaggaagc 267
>gb|CA745862.1|CA745862 wri2s.pk003.f4 wri2s Triticum aestivum cDNA clone wri2s.pk003.f4 5'
end, mRNA sequence
Length = 486
Score = 85.7 bits (43), Expect = 3e-015
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 112 tgcaaataaggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctag 171
||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||
Sbjct: 23 tgcaaataaggaggctgaaaaggaggcttttgaagaagctgaaaaggagaggaaagctag 82
Query: 172 agaagaagaggaagc 186
|||||| |||||||
Sbjct: 83 agaagacaaggaagc 97
>gb|CD880088.1|CD880088 AZO5.001H17R010131 AZO5 Triticum aestivum cDNA clone AZO5001H17,
mRNA sequence
Length = 417
Score = 85.7 bits (43), Expect = 3e-015
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 112 tgcaaataaggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctag 171
||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||
Sbjct: 388 tgcaaataaggaggctgaaaaggaggcttttgaagaagctgaaaaggagaggaaagctag 329
Query: 172 agaagaagaggaagc 186
|||||| |||||||
Sbjct: 328 agaagataaggaagc 314
>gb|CV778388.1|CV778388 FGAS072796 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 822
Score = 85.7 bits (43), Expect = 3e-015
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 112 tgcaaataaggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctag 171
||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||
Sbjct: 143 tgcaaataaggaggctgaaaaggaggcttttgaagaagctgaaaaggagaggaaagctag 202
Query: 172 agaagaagaggaagc 186
|||||| |||||||
Sbjct: 203 agaagacaaggaagc 217
>gb|CA700103.1|CA700103 wkm1c.pk0003.b9 wkm1c Triticum aestivum cDNA clone wkm1c.pk0003.b9
5' end, mRNA sequence
Length = 294
Score = 83.8 bits (42), Expect = 1e-014
Identities = 92/109 (84%)
Strand = Plus / Plus
Query: 24 ggcaggtcaaagctggttcagtttttgacaacattttgatttgcgatgacccagactatg 83
||||||| ||||| || ||| | |||||||||||| | |||||||||||||| || ||||
Sbjct: 141 ggcaggtaaaagccggctcantatttgacaacattctcatttgcgatgacccggaatatg 200
Query: 84 caagacatgttgtagatgaaacttttgctgcaaataaggaggctgaaaa 132
||| ||| |||| |||||||| | | |||||||||||||||||||||
Sbjct: 201 caaaacaggttgccgatgaaacatggggtgcaaataaggaggctgaaaa 249
>gb|CK206530.1|CK206530 FGAS018128 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 761
Score = 69.9 bits (35), Expect = 2e-010
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 112 tgcaaataaggaggctgaaaaggaggcctttgaaggagctgaaagaaagaggaaggctag 171
|||||||||| |||||||||||||||| ||||||| ||| |||| ||||||| |||||
Sbjct: 41 tgcaaataagaaggctgaaaaggaggcttttgaagaagcggaaaaggagaggaaagctag 100
Query: 172 agaagaagaggaagc 186
|||||| |||||||
Sbjct: 101 agaagacaaggaagc 115
>gb|CA679576.1|CA679576 wlm4.pk0017.g3 wlm4 Triticum aestivum cDNA clone wlm4.pk0017.g3 5'
end, mRNA sequence
Length = 630
Score = 58.0 bits (29), Expect = 7e-007
Identities = 67/77 (87%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 112 tgcaaataaggaggct-gaaaaggaggccttt-gaaggagctgaaagaaagaggaaggct 169
|||||||||||||||| ||||||||||| ||| |||| |||||||| ||||||| |||
Sbjct: 263 tgcaaataaggaggcttgaaaaggaggctttttgaagaagctgaaaaggagaggaaagct 204
Query: 170 agagaagaagaggaagc 186
|||||||| |||||||
Sbjct: 203 agagaagataaggaagc 187
>gb|AL820601.1|AL820601 AL820601 O:232 Triticum aestivum cDNA clone C05_O232_plate_15, mRNA
sequence
Length = 663
Score = 42.1 bits (21), Expect = 0.043
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 257 aaggatagatataagcgtcat 277
|||||||||||||||||||||
Sbjct: 622 aaggatagatataagcgtcat 602
>gb|AY693801.1| Triticum aestivum clone C05_O232_plate 15 CENP-C mRNA, partial cds
Length = 806
Score = 42.1 bits (21), Expect = 0.043
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 257 aaggatagatataagcgtcat 277
|||||||||||||||||||||
Sbjct: 648 aaggatagatataagcgtcat 628
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 117,269
Number of Sequences: 636343
Number of extensions: 117269
Number of successful extensions: 33796
Number of sequences better than 0.5: 29
Number of HSP's better than 0.5 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33714
Number of HSP's gapped (non-prelim): 55
length of query: 595
length of database: 367,240,239
effective HSP length: 19
effective length of query: 576
effective length of database: 355,149,722
effective search space: 204566239872
effective search space used: 204566239872
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)