BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8010745.2.1
(805 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ249875.1|BJ249875 BJ249875 Y. Ogihara unpublished cDNA... 80 3e-013
gb|CA614233.1|CA614233 wr1.pk0158.a5 wr1 Triticum aestivum ... 80 3e-013
gb|CD919712.1|CD919712 G608.114E24F010911 G608 Triticum aes... 66 4e-009
gb|BJ279641.1|BJ279641 BJ279641 Y. Ogihara unpublished cDNA... 62 6e-008
gb|CK207288.1|CK207288 FGAS018907 Triticum aestivum FGAS: L... 62 6e-008
gb|CK207708.1|CK207708 FGAS019364 Triticum aestivum FGAS: L... 62 6e-008
gb|CD879996.1|CD879996 AZO4.106P21R011122 AZO4 Triticum aes... 60 2e-007
gb|CA594383.1|CA594383 wpa1c.pk006.h19 wpa1c Triticum aesti... 56 4e-006
gb|CD454581.1|CD454581 WHE2328_C01_F02ZT CS wheat pre-anthe... 56 4e-006
gb|CD883589.1|CD883589 F1.113M21R010628 F1 Triticum aestivu... 54 2e-005
gb|CD894683.1|CD894683 G118.126N14R011119 G118 Triticum aes... 54 2e-005
gb|CD897190.1|CD897190 G174.105B18F010824 G174 Triticum aes... 54 2e-005
gb|CD897191.1|CD897191 G174.105B18R011120 G174 Triticum aes... 54 2e-005
gb|CD913800.1|CD913800 G550.119F02R010920 G550 Triticum aes... 52 6e-005
gb|BQ169606.1|BQ169606 WHE0957_F11_L20ZT Wheat pre-anthesis... 48 0.001
gb|BQ169625.1|BQ169625 WHE0958_F10_L20ZT Wheat pre-anthesis... 48 0.001
gb|BJ244090.1|BJ244090 BJ244090 Y. Ogihara unpublished cDNA... 46 0.004
gb|BE517240.1|BE517240 WHE0616_H10_P20ZA Wheat ABA-treated ... 42 0.058
gb|BM134945.1|BM134945 WHE0460_A12_A23ZS Wheat Fusarium gra... 42 0.058
gb|BJ262884.1|BJ262884 BJ262884 Y. Ogihara unpublished cDNA... 42 0.058
gb|BJ265015.1|BJ265015 BJ265015 Y. Ogihara unpublished cDNA... 42 0.058
gb|BJ265356.1|BJ265356 BJ265356 Y. Ogihara unpublished cDNA... 42 0.058
gb|AL819865.1|AL819865 AL819865 n:129 Triticum aestivum cDN... 42 0.058
gb|AL823073.1|AL823073 AL823073 p:133 Triticum aestivum cDN... 42 0.058
gb|AL823142.1|AL823142 AL823142 p:133 Triticum aestivum cDN... 42 0.058
gb|BQ901767.1|BQ901767 Ta02_11e11_R Ta02_AAFC_ECORC_Fusariu... 42 0.058
gb|BQ901774.1|BQ901774 Ta02_11f09_R Ta02_AAFC_ECORC_Fusariu... 42 0.058
gb|BQ901863.1|BQ901863 Ta02_13c04_R Ta02_AAFC_ECORC_Fusariu... 42 0.058
gb|BJ246125.1|BJ246125 BJ246125 Y. Ogihara unpublished cDNA... 42 0.058
gb|BJ252044.1|BJ252044 BJ252044 Y. Ogihara unpublished cDNA... 42 0.058
gb|BJ295331.1|BJ295331 BJ295331 Y. Ogihara unpublished cDNA... 42 0.058
gb|BJ300164.1|BJ300164 BJ300164 Y. Ogihara unpublished cDNA... 42 0.058
gb|CA687377.1|CA687377 wlm96.pk036.k6 wlm96 Triticum aestiv... 42 0.058
gb|CD491252.1|CD491252 WHE3082_A07_B14ZT CS wheat cold-stre... 42 0.058
gb|CD884211.1|CD884211 F1.115O14F010507 F1 Triticum aestivu... 42 0.058
gb|CD910405.1|CD910405 G550.001D05R010829 G550 Triticum aes... 42 0.058
gb|CD912352.1|CD912352 G550.114C05F010523 G550 Triticum aes... 42 0.058
gb|CD912353.1|CD912353 G550.114C05R010903 G550 Triticum aes... 42 0.058
gb|CD924861.1|CD924861 G750.114P09F010706 G750 Triticum aes... 42 0.058
gb|AJ602773.1|AJ602773 AJ602773 T06 Triticum aestivum cDNA ... 42 0.058
gb|CV770963.1|CV770963 FGAS065356 Triticum aestivum FGAS: L... 42 0.058
gb|CV778320.1|CV778320 FGAS072728 Triticum aestivum FGAS: L... 42 0.058
gb|DR733146.1|DR733146 FGAS078908 Triticum aestivum FGAS: L... 42 0.058
gb|BF473283.1|BF473283 WHE0926_F12_K24ZS Wheat 5-15 DAP spi... 40 0.23
gb|BF483316.1|BF483316 WHE1791_D05_G09ZS Wheat pre-anthesis... 40 0.23
gb|BM138675.1|BM138675 WHE0496_E09_I18ZS Wheat Fusarium gra... 40 0.23
gb|BJ207110.1|BJ207110 BJ207110 Y. Ogihara unpublished cDNA... 40 0.23
gb|BJ208051.1|BJ208051 BJ208051 Y. Ogihara unpublished cDNA... 40 0.23
gb|BJ211503.1|BJ211503 BJ211503 Y. Ogihara unpublished cDNA... 40 0.23
gb|BJ214392.1|BJ214392 BJ214392 Y. Ogihara unpublished cDNA... 40 0.23
gb|BJ218685.1|BJ218685 BJ218685 Y. Ogihara unpublished cDNA... 40 0.23
gb|BJ320914.1|BJ320914 BJ320914 Y. Ogihara unpublished cDNA... 40 0.23
gb|AL818879.1|AL818879 AL818879 l:125 Triticum aestivum cDN... 40 0.23
gb|CA497762.1|CA497762 WHE3231_H12_P23ZT Wheat meiotic anth... 40 0.23
gb|CA628775.1|CA628775 wle1n.pk0009.c11 wle1n Triticum aest... 40 0.23
gb|CD894557.1|CD894557 G118.126I10F010823 G118 Triticum aes... 40 0.23
gb|CD894558.1|CD894558 G118.126I10R011119 G118 Triticum aes... 40 0.23
gb|CD895053.1|CD895053 G118.127N13R011119 G118 Triticum aes... 40 0.23
gb|CD930608.1|CD930608 GR45.111N11F010418 GR45 Triticum aes... 40 0.23
gb|CD938061.1|CD938061 OV.108P07F010206 OV Triticum aestivu... 40 0.23
gb|CK199172.1|CK199172 FGAS007666 Triticum aestivum FGAS: L... 40 0.23
gb|CK208422.1|CK208422 FGAS020135 Triticum aestivum FGAS: L... 40 0.23
gb|AL810086.1|AL810086 AL810086 d:15 Triticum aestivum cDNA... 40 0.23
gb|AL811907.1|AL811907 AL811907 d:15 Triticum aestivum cDNA... 40 0.23
gb|CV064525.1|CV064525 WNEL12a12 Wheat EST endosperm librar... 40 0.23
gb|CV066751.1|CV066751 WNEL7h7 Wheat EST endosperm library ... 40 0.23
gb|CV781981.1|CV781981 FGAS076394 Triticum aestivum FGAS: L... 40 0.23
gb|DR739215.1|DR739215 FGAS084432 Triticum aestivum FGAS: L... 40 0.23
>gb|BJ249875.1|BJ249875 BJ249875 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14c22 3', mRNA sequence
Length = 705
Score = 79.8 bits (40), Expect = 3e-013
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 249 aaccgaacgcccactcgaagttgtccagcagcgtccacacgaagtagccccgcacgtttg 308
||||||| |||||||||||||||||| || |||||||||||||||| ||||||||||
Sbjct: 358 aaccgaaaccccactcgaagttgtccatgaggctccacacgaagtagccacgcacgtttg 417
Query: 309 ctccgttcctga 320
|||| |||||||
Sbjct: 418 ctcctttcctga 429
>gb|CA614233.1|CA614233 wr1.pk0158.a5 wr1 Triticum aestivum cDNA clone wr1.pk0158.a5 5'
end, mRNA sequence
Length = 593
Score = 79.8 bits (40), Expect = 3e-013
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 249 aaccgaacgcccactcgaagttgtccagcagcgtccacacgaagtagccccgcacgtttg 308
||||||| |||||||||||||||||| || |||||||||||||||| ||||||||||
Sbjct: 311 aaccgaaaccccactcgaagttgtccatgaggctccacacgaagtagccacgcacgtttg 252
Query: 309 ctccgttcctga 320
|||| |||||||
Sbjct: 251 ctcctttcctga 240
>gb|CD919712.1|CD919712 G608.114E24F010911 G608 Triticum aestivum cDNA clone G608114E24,
mRNA sequence
Length = 783
Score = 65.9 bits (33), Expect = 4e-009
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 249 aaccgaacgcccactcgaagttgtccagcagcgtccacacgaagtagccccgcacgtttg 308
||||||| |||||||||||||||||| || |||||||||||||||| ||| |||||
Sbjct: 448 aaccgaaaccccactcgaagttgtccatgaggctccacacgaagtagccatgcaagtttg 389
Query: 309 ctccgttcctgagtgct 325
|||| ||||||| ||||
Sbjct: 388 ctcctttcctgactgct 372
Score = 56.0 bits (28), Expect = 4e-006
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 624 tggcgtagatcgccgtgtagtggttcagcccgatgaagtccgccttgt 671
||||||||||||||||||| ||||| | |||||| || ||||||||||
Sbjct: 76 tggcgtagatcgccgtgtaatggtttaccccgataaaatccgccttgt 29
>gb|BJ279641.1|BJ279641 BJ279641 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr3p10 5', mRNA sequence
Length = 629
Score = 61.9 bits (31), Expect = 6e-008
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 259 ccactcgaagttgtccagcagcgtccacacgaagtagccccgcacgtttgctccgttcct 318
||||||||||||||||| || |||||||||||||||| | |||||||||||| ||||
Sbjct: 625 ccactcgaagttgtccatgagactccacacgaagtagccactcacgtttgctcctctcct 566
Query: 319 gagtgct 325
|| ||||
Sbjct: 565 gactgct 559
>gb|CK207288.1|CK207288 FGAS018907 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1160
Score = 61.9 bits (31), Expect = 6e-008
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 258 cccactcgaagttgtccagcagcgtccacacgaagtagccccgcacgtttgctccgttcc 317
|||||||||||||||| ||||||| ||||||||| || ||| ||||||||| |||| ||
Sbjct: 265 cccactcgaagttgtcgagcagcgaccacacgaaataccccttcacgtttgcaccgtccc 206
Query: 318 tga 320
|||
Sbjct: 205 tga 203
>gb|CK207708.1|CK207708 FGAS019364 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1106
Score = 61.9 bits (31), Expect = 6e-008
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 258 cccactcgaagttgtccagcagcgtccacacgaagtagccccgcacgtttgctccgttcc 317
|||||||||||||||| ||||||| ||||||||| || ||| ||||||||| |||| ||
Sbjct: 363 cccactcgaagttgtcgagcagcgaccacacgaaataccccttcacgtttgcaccgtccc 422
Query: 318 tga 320
|||
Sbjct: 423 tga 425
>gb|CD879996.1|CD879996 AZO4.106P21R011122 AZO4 Triticum aestivum cDNA clone AZO4106P21,
mRNA sequence
Length = 530
Score = 60.0 bits (30), Expect = 2e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 256 cgcccactcgaagttgtccagcagcgtccacacgaagtagccccgcacgt 305
||||||||| ||||||||||||||| |||| |||||||||| |||||||
Sbjct: 346 cgcccactcccagttgtccagcagcgaccacgcgaagtagccgcgcacgt 395
>gb|CA594383.1|CA594383 wpa1c.pk006.h19 wpa1c Triticum aestivum cDNA clone wpa1c.pk006.h19
5' end, mRNA sequence
Length = 527
Score = 56.0 bits (28), Expect = 4e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 259 ccactcgaagttgtccagcagcgtccacacgaagtagccc 298
||||||||||||||||||||||| ||| |||||||||||
Sbjct: 314 ccactcgaagttgtccagcagcgaccatgcgaagtagccc 275
>gb|CD454581.1|CD454581 WHE2328_C01_F02ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2328_C01_F02, mRNA sequence
Length = 636
Score = 56.0 bits (28), Expect = 4e-006
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 259 ccactcgaagttgtccagcagcgtccacacgaagtagccc 298
||||||||||||||||||||||| ||| |||||||||||
Sbjct: 311 ccactcgaagttgtccagcagcgaccatgcgaagtagccc 350
>gb|CD883589.1|CD883589 F1.113M21R010628 F1 Triticum aestivum cDNA clone F1113M21, mRNA
sequence
Length = 499
Score = 54.0 bits (27), Expect = 2e-005
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 259 ccactcgaagttgtccagcagcgtccacacgaagtagccccgcacgtttgctccgttcct 318
||||||||||||||||| || |||||||||||||||| | |||||| ||||| ||||
Sbjct: 234 ccactcgaagttgtccatgagactccacacgaagtagccactcacgttggctcctctcct 293
Query: 319 gagtgct 325
|| ||||
Sbjct: 294 gactgct 300
>gb|CD894683.1|CD894683 G118.126N14R011119 G118 Triticum aestivum cDNA clone G118126N14,
mRNA sequence
Length = 595
Score = 54.0 bits (27), Expect = 2e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 267 agttgtccagcagcgtccacacgaagtagcc 297
||||||||||||||| |||||||||||||||
Sbjct: 352 agttgtccagcagcgaccacacgaagtagcc 382
>gb|CD897190.1|CD897190 G174.105B18F010824 G174 Triticum aestivum cDNA clone G174105B18,
mRNA sequence
Length = 554
Score = 54.0 bits (27), Expect = 2e-005
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 267 agttgtccagcagcgtccacacgaagtagcc 297
||||||||||||||| |||||||||||||||
Sbjct: 475 agttgtccagcagcgaccacacgaagtagcc 445
>gb|CD897191.1|CD897191 G174.105B18R011120 G174 Triticum aestivum cDNA clone G174105B18,
mRNA sequence
Length = 763
Score = 54.0 bits (27), Expect = 2e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 267 agttgtccagcagcgtccacacgaagtagcc 297
||||||||||||||| |||||||||||||||
Sbjct: 323 agttgtccagcagcgaccacacgaagtagcc 353
>gb|CD913800.1|CD913800 G550.119F02R010920 G550 Triticum aestivum cDNA clone G550119F02,
mRNA sequence
Length = 475
Score = 52.0 bits (26), Expect = 6e-005
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 267 agttgtccagcagcgtccacacgaagtagccccg 300
||||||||||||||| |||||||||||| |||||
Sbjct: 389 agttgtccagcagcgaccacacgaagtacccccg 422
>gb|BQ169606.1|BQ169606 WHE0957_F11_L20ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0957_F11_L20, mRNA sequence
Length = 528
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcct 318
|||||||||||| |||||| |||||| |||||||||
Sbjct: 388 ccacacgaagtatccccgcgcgtttgatccgttcct 423
>gb|BQ169625.1|BQ169625 WHE0958_F10_L20ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0958_F10_L20, mRNA sequence
Length = 576
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcct 318
|||||||||||| |||||| |||||| |||||||||
Sbjct: 430 ccacacgaagtatccccgcgcgtttgatccgttcct 465
>gb|BJ244090.1|BJ244090 BJ244090 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14c22 5', mRNA sequence
Length = 658
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 624 tggcgtagatcgccgtgtagtggttcagcccgatgaagtccgccttg 670
||||||||||||||||||| ||||| | ||||| || |||||||||
Sbjct: 412 tggcgtagatcgccgtgtaatggtttacaccgataaaatccgccttg 366
>gb|BE517240.1|BE517240 WHE0616_H10_P20ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0616_H10_P20, mRNA sequence
Length = 508
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 460 ccacacgaagtagccctgcacgttcgacccgttcctg 496
>gb|BM134945.1|BM134945 WHE0460_A12_A23ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0460_A12_A23,
mRNA sequence
Length = 444
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 399 ccacacgaagtagccctgcacgttcgacccgttcctg 363
>gb|BJ262884.1|BJ262884 BJ262884 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh20m20 3', mRNA sequence
Length = 536
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 437 ccacacgaagtagccctgcacgttggacccgttcctg 473
>gb|BJ265015.1|BJ265015 BJ265015 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh11d13 3', mRNA sequence
Length = 611
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 433 ccacacgaagtagccctgcacgttggacccgttcctg 469
>gb|BJ265356.1|BJ265356 BJ265356 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21k11 3', mRNA sequence
Length = 749
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 441 ccacacgaagtagccctgcacgttggacccgttcctg 477
>gb|AL819865.1|AL819865 AL819865 n:129 Triticum aestivum cDNA clone B11_n129_plate_6, mRNA
sequence
Length = 638
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 582 ccacacgaagtagccctgcacgttcgacccgttcctg 546
>gb|AL823073.1|AL823073 AL823073 p:133 Triticum aestivum cDNA clone H02_p133_plate_10, mRNA
sequence
Length = 496
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 199 ccacacgaagtagccctgcacgttcgacccgttcctg 163
>gb|AL823142.1|AL823142 AL823142 p:133 Triticum aestivum cDNA clone H02_p133_plate_11, mRNA
sequence
Length = 541
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 200 ccacacgaagtagccctgcacgttcgacccgttcctg 164
>gb|BQ901767.1|BQ901767 Ta02_11e11_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_11e11, mRNA
sequence
Length = 165
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 92 ccacacgaagtagccctgcacgttcgacccgttcctg 128
>gb|BQ901774.1|BQ901774 Ta02_11f09_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_11f09, mRNA
sequence
Length = 166
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 74 ccacacgaagtagccctgcacgttcgacccgttcctg 38
>gb|BQ901863.1|BQ901863 Ta02_13c04_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_13c04, mRNA
sequence
Length = 164
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 91 ccacacgaagtagccctgcacgttcgacccgttcctg 127
>gb|BJ246125.1|BJ246125 BJ246125 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf21j14 5', mRNA sequence
Length = 630
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 564 ccacacgaagtagccctgcacgttcgacccgttcctg 528
>gb|BJ252044.1|BJ252044 BJ252044 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf21j14 3', mRNA sequence
Length = 631
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 398 ccacacgaagtagccctgcacgttcgacccgttcctg 434
>gb|BJ295331.1|BJ295331 BJ295331 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl2o11 3', mRNA sequence
Length = 687
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 353 ccacacgaagtagccctgcacgttcgacccgttcctg 389
>gb|BJ300164.1|BJ300164 BJ300164 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl17m24 3', mRNA sequence
Length = 716
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 404 ccacacgaagtagccctgcacgttcgacccgttcctg 440
>gb|CA687377.1|CA687377 wlm96.pk036.k6 wlm96 Triticum aestivum cDNA clone wlm96.pk036.k6 5'
end, mRNA sequence
Length = 445
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 236 ccacacgaagtagccctgcacgttcgacccgttcctg 200
>gb|CD491252.1|CD491252 WHE3082_A07_B14ZT CS wheat cold-stressed seedling subtracted cDNA
library Triticum aestivum cDNA clone WHE3082_A07_B14,
mRNA sequence
Length = 470
Score = 42.1 bits (21), Expect = 0.058
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 101 catcacgagtctgctctccgtgcct 125
||||||| |||||||||||||||||
Sbjct: 404 catcacgcgtctgctctccgtgcct 428
>gb|CD884211.1|CD884211 F1.115O14F010507 F1 Triticum aestivum cDNA clone F1115O14, mRNA
sequence
Length = 658
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 424 ccacacgaagtagccctgcacgttcgacccgttcctg 388
>gb|CD910405.1|CD910405 G550.001D05R010829 G550 Triticum aestivum cDNA clone G550001D05,
mRNA sequence
Length = 728
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 289 ccacacgaagtagccctgcacgttcgacccgttcctg 325
>gb|CD912352.1|CD912352 G550.114C05F010523 G550 Triticum aestivum cDNA clone G550114C05,
mRNA sequence
Length = 582
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 291 ccacacgaagtagccctgcacgttcgacccgttcctg 255
>gb|CD912353.1|CD912353 G550.114C05R010903 G550 Triticum aestivum cDNA clone G550114C05,
mRNA sequence
Length = 636
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 416 ccacacgaagtagccctgcacgttcgacccgttcctg 452
>gb|CD924861.1|CD924861 G750.114P09F010706 G750 Triticum aestivum cDNA clone G750114P09,
mRNA sequence
Length = 605
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 385 ccacacgaagtagccctgcacgttcgacccgttcctg 349
>gb|AJ602773.1|AJ602773 AJ602773 T06 Triticum aestivum cDNA clone F10_T06_plate_25, mRNA
sequence
Length = 218
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 108 ccacacgaagtagccctgcacgttcgacccgttcctg 72
>gb|CV770963.1|CV770963 FGAS065356 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 890
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 503 ccacacgaagtagccctgcacgttcgacccgttcctg 467
>gb|CV778320.1|CV778320 FGAS072728 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 848
Score = 42.1 bits (21), Expect = 0.058
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 283 ccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||||||||||||| ||||||| | |||||||||
Sbjct: 366 ccacacgaagtagccctgcacgttcgacccgttcctg 330
>gb|DR733146.1|DR733146 FGAS078908 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 647
Score = 42.1 bits (21), Expect = 0.058
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 271 gtccagcagcgtccacacgaagtagccccgcacgtttgctccgttcctg 319
|||||| | ||||||| ||||||||||| ||||||| | |||||||||
Sbjct: 307 gtccagaatcgtccacccgaagtagccctgcacgttcgacccgttcctg 259
>gb|BF473283.1|BF473283 WHE0926_F12_K24ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0926_F12_K24, mRNA sequence
Length = 592
Score = 40.1 bits (20), Expect = 0.23
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 259 ccactcgaagttgtccagcagcgtccacacgaagtagccc 298
|||||||||||||||||| || | |||| | |||||||||
Sbjct: 306 ccactcgaagttgtccaggagggaccacgcaaagtagccc 267
>gb|BF483316.1|BF483316 WHE1791_D05_G09ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1791_D05_G09, mRNA sequence
Length = 553
Score = 40.1 bits (20), Expect = 0.23
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 259 ccactcgaagttgtccagcagcgtccacacgaagtagccc 298
|||||||||||||||||| || | |||| | |||||||||
Sbjct: 398 ccactcgaagttgtccaggagggaccacgcaaagtagccc 359
>gb|BM138675.1|BM138675 WHE0496_E09_I18ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0496_E09_I18,
mRNA sequence
Length = 533
Score = 40.1 bits (20), Expect = 0.23
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 259 ccactcgaagttgtccagcagcgtccacacgaagtagccc 298
|||||||||||||||||| || | |||| | |||||||||
Sbjct: 284 ccactcgaagttgtccaggagggaccacgcaaagtagccc 245
>gb|BJ207110.1|BJ207110 BJ207110 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh2c22 5', mRNA sequence
Length = 598
Score = 40.1 bits (20), Expect = 0.23
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 259 ccactcgaagttgtccagcagcgtccacacgaagtagccc 298
|||||||||||||||||| || | |||| | |||||||||
Sbjct: 243 ccactcgaagttgtccaggagggaccacgcaaagtagccc 204
>gb|BJ208051.1|BJ208051 BJ208051 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh6j23 5', mRNA sequence
Length = 621
Score = 40.1 bits (20), Expect = 0.23
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 259 ccactcgaagttgtccagcagcgtccacacgaagtagccc 298
|||||||||||||||||| || | |||| | |||||||||
Sbjct: 118 ccactcgaagttgtccaggagggaccacgcaaagtagccc 79
>gb|BJ211503.1|BJ211503 BJ211503 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh31a08 5', mRNA sequence
Length = 493
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 675 gcagcagcagcgccttctcc 694
||||||||||||||||||||
Sbjct: 209 gcagcagcagcgccttctcc 190
>gb|BJ214392.1|BJ214392 BJ214392 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh2c22 3', mRNA sequence
Length = 610
Score = 40.1 bits (20), Expect = 0.23
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 259 ccactcgaagttgtccagcagcgtccacacgaagtagccc 298
|||||||||||||||||| || | |||| | |||||||||
Sbjct: 486 ccactcgaagttgtccaggagggaccacgcaaagtagccc 525
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 170,305
Number of Sequences: 636343
Number of extensions: 170305
Number of successful extensions: 41234
Number of sequences better than 0.5: 69
Number of HSP's better than 0.5 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41144
Number of HSP's gapped (non-prelim): 90
length of query: 805
length of database: 367,240,239
effective HSP length: 19
effective length of query: 786
effective length of database: 355,149,722
effective search space: 279147681492
effective search space used: 279147681492
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)