BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 7297169.2.1
(545 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA600004.1|CA600004 waw1c.pk004.h20 waw1c Triticum aesti... 587 e-166
gb|CD931425.1|CD931425 GR45.114H05F010419 GR45 Triticum aes... 565 e-159
gb|AL824948.1|AL824948 AL824948 p:234 Triticum aestivum cDN... 533 e-150
gb|CD934030.1|CD934030 GR45.122M12F010720 GR45 Triticum aes... 400 e-110
gb|CA716631.1|CA716631 wdk3c.pk026.n14 wdk3c Triticum aesti... 373 e-102
gb|CA704068.1|CA704068 wdk1c.pk007.n9 wdk1c Triticum aestiv... 341 3e-092
gb|BE405516.1|BE405516 WHE1212_C03_F06ZS Wheat etiolated se... 204 5e-051
gb|CD896602.1|CD896602 G174.103F20F010822 G174 Triticum aes... 159 2e-037
gb|CD929709.1|CD929709 GR45.108O17F010413 GR45 Triticum aes... 149 2e-034
gb|CA502546.1|CA502546 WHE4048_G12_N24ZT Wheat meiotic anth... 143 1e-032
gb|BQ240187.1|BQ240187 TaE05021A03R TaE05 Triticum aestivum... 141 6e-032
gb|BQ753043.1|BQ753043 WHE4122_C10_E20ZS Wheat salt-stresse... 135 4e-030
gb|BF484781.1|BF484781 WHE2319_F01_L01ZS Wheat pre-anthesis... 133 1e-029
gb|BF483943.1|BF483943 WHE2305_F07_K13ZS Wheat pre-anthesis... 127 9e-028
gb|BQ803291.1|BQ803291 WHE2835_H09_P17ZS Triticum monococcu... 127 9e-028
gb|CA727027.1|CA727027 wde1f.pk002.p5 wde1f Triticum aestiv... 127 9e-028
gb|CK210273.1|CK210273 FGAS022074 Triticum aestivum FGAS: L... 125 3e-027
gb|AL809485.1|AL809485 AL809485 a:11 Triticum aestivum cDNA... 125 3e-027
gb|CV065870.1|CV065870 WNEL27g10 Wheat EST endosperm librar... 125 3e-027
gb|CA701564.1|CA701564 wkm2c.pk006.j2 wkm2c Triticum aestiv... 123 1e-026
gb|CK161226.1|CK161226 FGAS013791 Triticum aestivum FGAS: L... 115 3e-024
gb|BF474935.1|BF474935 WHE2101_H01_O01ZS Wheat salt-stresse... 107 8e-022
gb|CD891933.1|CD891933 G118.118P21F010724 G118 Triticum aes... 88 7e-016
gb|CA483778.1|CA483778 WHE3205_A10_A19ZS Wheat meiotic anth... 86 3e-015
gb|CA730536.1|CA730536 wip1c.pk005.a19 wip1c Triticum aesti... 74 1e-011
gb|BQ803087.1|BQ803087 WHE2833_E09_I17ZS Triticum monococcu... 70 2e-010
gb|BE499390.1|BE499390 WHE0973_A05_B09ZS Wheat pre-anthesis... 66 3e-009
gb|BQ805475.1|BQ805475 WHE3567_D07_G13ZS Wheat developing g... 66 3e-009
gb|CD919652.1|CD919652 G608.114B17F010911 G608 Triticum aes... 66 3e-009
gb|CK170497.1|CK170497 FGAS045415 Triticum aestivum FGAS: T... 60 2e-007
gb|CK171254.1|CK171254 FGAS046430 Triticum aestivum FGAS: T... 60 2e-007
gb|CK172115.1|CK172115 FGAS047667 Triticum aestivum FGAS: T... 60 2e-007
gb|BF484203.1|BF484203 WHE2309_E07_I13ZS Wheat pre-anthesis... 58 7e-007
gb|BF484791.1|BF484791 WHE2319_G01_N01ZS Wheat pre-anthesis... 56 3e-006
gb|BQ247076.1|BQ247076 TaE15001F08R TaE15 Triticum aestivum... 56 3e-006
gb|AL818815.1|AL818815 AL818815 l:125 Triticum aestivum cDN... 56 3e-006
gb|BU672154.1|BU672154 WHE3301_C03_E05ZS Chinese Spring whe... 56 3e-006
gb|CA717192.1|CA717192 wdk4c.pk0004.d3 wdk4c Triticum aesti... 56 3e-006
gb|CD900684.1|CD900684 G356.101G16F010906 G356 Triticum aes... 56 3e-006
gb|CF133293.1|CF133293 WHE4356_C08_E16ZT Wheat meiotic flor... 56 3e-006
gb|CF133299.1|CF133299 WHE4356_D02_G04ZT Wheat meiotic flor... 56 3e-006
gb|CN009322.1|CN009322 WHE3857_D08_H15ZS Wheat Fusarium gra... 56 3e-006
gb|BF202409.1|BF202409 WHE1764_C10_E20ZS Wheat pre-anthesis... 54 1e-005
gb|AL822551.1|AL822551 AL822551 p:234 Triticum aestivum cDN... 54 1e-005
gb|BQ903392.1|BQ903392 Ta03_13f02_R Ta03_AAFC_ECORC_Fusariu... 54 1e-005
gb|CD874616.1|CD874616 AZO3.102J24F011001 AZO3 Triticum aes... 54 1e-005
gb|CD896208.1|CD896208 G174.102B20F010823 G174 Triticum aes... 54 1e-005
gb|CD898723.1|CD898723 G174.109N19F010824 G174 Triticum aes... 54 1e-005
gb|AL809759.1|AL809759 AL809759 a:11 Triticum aestivum cDNA... 54 1e-005
gb|CD879521.1|CD879521 AZO4.105I10R011123 AZO4 Triticum aes... 50 2e-004
gb|CD927796.1|CD927796 GR45.103D04F010315 GR45 Triticum aes... 48 6e-004
gb|BQ743963.1|BQ743963 WHE4110_B12_C24ZS Wheat salt-stresse... 46 0.002
gb|CA498503.1|CA498503 WHE3244_C04_F08ZT Wheat meiotic anth... 46 0.002
gb|CD373689.1|CD373689 WHE1212_C03_F06ZT CS wheat etiolated... 46 0.002
gb|BF483786.1|BF483786 WHE2308_G03_N06ZS Wheat pre-anthesis... 44 0.010
gb|BJ208570.1|BJ208570 BJ208570 Y. Ogihara unpublished cDNA... 42 0.039
gb|BJ215838.1|BJ215838 BJ215838 Y. Ogihara unpublished cDNA... 42 0.039
gb|BQ838291.1|BQ838291 WHE2908_G02_N04ZS Wheat aluminum-str... 42 0.039
gb|CA633026.1|CA633026 wle1n.pk0065.c11 wle1n Triticum aest... 42 0.039
gb|CK208204.1|CK208204 FGAS019887 Triticum aestivum FGAS: L... 42 0.039
gb|DR736803.1|DR736803 FGAS082173 Triticum aestivum FGAS: L... 42 0.039
gb|BE637787.1|BE637787 WHE1755-1758_H21_H21ZS Wheat pre-ant... 40 0.15
gb|BF483269.1|BF483269 WHE1787_H02_O03ZS Wheat pre-anthesis... 40 0.15
gb|BQ170719.1|BQ170719 WHE1798_B12_D24ZT Wheat pre-anthesis... 40 0.15
gb|CA630924.1|CA630924 wle1n.pk0039.f5 wle1n Triticum aesti... 40 0.15
gb|CA705140.1|CA705140 wdk1c.pk020.n3 wdk1c Triticum aestiv... 40 0.15
gb|CD928829.1|CD928829 GR45.106B18F010319 GR45 Triticum aes... 40 0.15
gb|CD928830.1|CD928830 GR45.106B18R010611 GR45 Triticum aes... 40 0.15
gb|CK207295.1|CK207295 FGAS018914 Triticum aestivum FGAS: L... 40 0.15
>gb|CA600004.1|CA600004 waw1c.pk004.h20 waw1c Triticum aestivum cDNA clone waw1c.pk004.h20
5' end, mRNA sequence
Length = 639
Score = 587 bits (296), Expect = e-166
Identities = 464/520 (89%)
Strand = Plus / Plus
Query: 14 cgactatggtcgggcagaagttcggcgacaagatcaggtactacgtccagacggacccgt 73
|||| ||||| ||||||||||||||||||||||||||| |||||||| |||| |||||||
Sbjct: 22 cgacaatggtggggcagaagttcggcgacaagatcaggcactacgtcaagaccgacccgt 81
Query: 74 cgccaacggcgaccatcgtgttccgcggcacagtcatcggcaagtcgccgtcggcgcctc 133
| || ||||||||||||||||||| |||||| |||||||| ||||||||||| ||||| |
Sbjct: 82 ccccgacggcgaccatcgtgttccacggcacggtcatcgggaagtcgccgtccgcgccgc 141
Query: 134 gagtggcggcgttctcgagccgaggccccaactaccgcgcaccggagatcctcaagcccg 193
| || ||| ||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 142 gcgtcgcgtcgttctcgagccgcggccccaactcccgcgcggcggagatcctcaagcccg 201
Query: 194 acgtcatcgccccgggcgtcaacatactcgcggcgtggaccggcgccgcctcccccaccg 253
|||||| ||||| |||||||||||||||||||| |||||||||| |||||||| ||||
Sbjct: 202 acgtcacagcccccggcgtcaacatactcgcggcatggaccggcgaggcctccccgaccg 261
Query: 254 acctggacatcgactcgaggcgcgtggagttcaacatcatctccggcacgtccatgtcct 313
|||| ||||||||| |||||||||| |||||||||||||||||| ||||||||||| |
Sbjct: 262 acctcgacatcgacccgaggcgcgtcccgttcaacatcatctccgggacgtccatgtcgt 321
Query: 314 gcccgcacgtgagcggcctcgccgcgctgctccgccaggcgcacccggagtggagccccg 373
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 322 gcccgcacgtgagcggcctcgcggcgctgctccggcaggcgcacccggagtggagccccg 381
Query: 374 cggcgatcaagtcggcgctcatgaccacggcgtacaacctggacaactccggggaaacca 433
||||| ||||||||||||||||||| || ||||||||||||||||||||||| || | ||
Sbjct: 382 cggcggtcaagtcggcgctcatgacgacagcgtacaacctggacaactccggcgagatca 441
Query: 434 tcaaggacctcgcgacgggcgtggagtcgacgccgttcgtccgtggcgccggtcacgtcg 493
|||||||||| || |||||| ||||||||||||||||| || |||||||| ||||| |
Sbjct: 442 tcaaggacctggccacgggcacagagtcgacgccgttcgtgcgcggcgccggccacgtgg 501
Query: 494 accccaacgccgccctcgacccaaggctggtgtacgacgc 533
|||||||| ||| |||||||| | ||||||||||||||
Sbjct: 502 accccaacagcgcgctcgaccccggcctggtgtacgacgc 541
>gb|CD931425.1|CD931425 GR45.114H05F010419 GR45 Triticum aestivum cDNA clone GR45114H05,
mRNA sequence
Length = 742
Score = 565 bits (285), Expect = e-159
Identities = 471/533 (88%)
Strand = Plus / Plus
Query: 1 cacctcgtgccggcgactatggtcgggcagaagttcggcgacaagatcaggtactacgtc 60
|||||| | ||| |||| ||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 111 cacctcatcccgtcgacaatggtggggcagaagttcggcgacaagatcaggcactacgtc 170
Query: 61 cagacggacccgtcgccaacggcgaccatcgtgttccgcggcacagtcatcggcaagtcg 120
|||| |||||||| || |||||||||||||| |||| |||||| |||||||| ||||||
Sbjct: 171 aagacagacccgtccccgacggcgaccatcgtcttccacggcacggtcatcgggaagtcg 230
Query: 121 ccgtcggcgcctcgagtggcggcgttctcgagccgaggccccaactaccgcgcaccggag 180
||||| ||||| || || ||| |||| |||||||| ||||| |||| |||||| |||||
Sbjct: 231 ccgtccgcgccccgcgtcgcgtcgttttcgagccgcggcccaaactcccgcgcggcggag 290
Query: 181 atcctcaagcccgacgtcatcgccccgggcgtcaacatactcgcggcgtggaccggcgcc 240
||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||
Sbjct: 291 atcctcaagcccgacgtcacggcccccggcgtcaacatactcgcggcctggaccggcgag 350
Query: 241 gcctcccccaccgacctggacatcgactcgaggcgcgtggagttcaacatcatctccggc 300
|||||||| |||||||| ||||||||| |||||||||| ||||||||||||||||||
Sbjct: 351 gcctccccgaccgacctcgacatcgacccgaggcgcgtcccgttcaacatcatctccggg 410
Query: 301 acgtccatgtcctgcccgcacgtgagcggcctcgccgcgctgctccgccaggcgcacccg 360
||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 411 acgtccatgtcgtgcccgcacgtgagcggcctcgcggcgctgctccggcaggcgcacccg 470
Query: 361 gagtggagccccgcggcgatcaagtcggcgctcatgaccacggcgtacaacctggacaac 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gagtggagccccgcggcggtcaagtcggcgctcatgaccacggcgtacaacctggacaac 530
Query: 421 tccggggaaaccatcaaggacctcgcgacgggcgtggagtcgacgccgttcgtccgtggc 480
||||| || | |||||||||||| || || ||| ||||| ||||||||||| || |||
Sbjct: 531 tccggcgagatcatcaaggacctggccaccggcacagagtccacgccgttcgtgcgcggc 590
Query: 481 gccggtcacgtcgaccccaacgccgccctcgacccaaggctggtgtacgacgc 533
||||| ||||| |||||||| | ||| |||||||| | ||||||||||||||
Sbjct: 591 gccgggcacgtggaccccaaaggcgcgctcgaccccggcctggtgtacgacgc 643
>gb|AL824948.1|AL824948 AL824948 p:234 Triticum aestivum cDNA clone A06_p234_plate_11, mRNA
sequence
Length = 584
Score = 533 bits (269), Expect = e-150
Identities = 461/525 (87%)
Strand = Plus / Plus
Query: 1 cacctcgtgccggcgactatggtcgggcagaagttcggcgacaagatcaggtactacgtc 60
|||||| | ||| |||| ||||| |||||||| |||||||||||||||||| | ||||||
Sbjct: 60 cacctcatcccgtcgacaatggtggggcagaaattcggcgacaagatcaggcagtacgtc 119
Query: 61 cagacggacccgtcgccaacggcgaccatcgtgttccgcggcacagtcatcggcaagtcg 120
||| |||||||| || |||||||||||||| |||| |||||| |||||||| ||||||
Sbjct: 120 aagatcgacccgtccccgacggcgaccatcgtcttccacggcacggtcatcgggaagtcg 179
Query: 121 ccgtcggcgcctcgagtggcggcgttctcgagccgaggccccaactaccgcgcaccggag 180
||||| ||||| || || ||| | ||||||||||| |||||||||| |||||| |||||
Sbjct: 180 ccgtccgcgccgcgcgtcgcgtccttctcgagccgcggccccaactcccgcgcggcggag 239
Query: 181 atcctcaagcccgacgtcatcgccccgggcgtcaacatactcgcggcgtggaccggcgcc 240
||||||||||||||||||| || || |||||||||||||||||||| ||||||||||
Sbjct: 240 atcctcaagcccgacgtcacggctcccggcgtcaacatactcgcggcatggaccggcgag 299
Query: 241 gcctcccccaccgacctggacatcgactcgaggcgcgtggagttcaacatcatctccggc 300
|||||||| |||||||| ||||||||| |||||||||| ||||||||||||||||||
Sbjct: 300 gcctccccgaccgacctcgacatcgacccgaggcgcgtcccgttcaacatcatctccggg 359
Query: 301 acgtccatgtcctgcccgcacgtgagcggcctcgccgcgctgctccgccaggcgcacccg 360
||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 360 acgtccatgtcgtgcccgcacgtgagcggcctcgcggcgctgctccggcaggcgcacccg 419
Query: 361 gagtggagccccgcggcgatcaagtcggcgctcatgaccacggcgtacaacctggacaac 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gagtggagccccgcggcggtcaagtcggcgctcatgaccacggcgtacaacctggacaac 479
Query: 421 tccggggaaaccatcaaggacctcgcgacgggcgtggagtcgacgccgttcgtccgtggc 480
||||| || | |||||||||||| || || |||| ||||||||||||||||||| |||
Sbjct: 480 tccggcgagatcatcaaggacctggccaccggcgaccagtcgacgccgttcgtccgcggc 539
Query: 481 gccggtcacgtcgaccccaacgccgccctcgacccaaggctggtg 525
|| || ||||| || |||||| ||| |||||||| ||||||||
Sbjct: 540 gctgggcacgtggatcccaacagcgcgctcgaccccgggctggtg 584
>gb|CD934030.1|CD934030 GR45.122M12F010720 GR45 Triticum aestivum cDNA clone GR45122M12,
mRNA sequence
Length = 520
Score = 400 bits (202), Expect = e-110
Identities = 332/374 (88%), Gaps = 1/374 (0%)
Strand = Plus / Plus
Query: 1 cacctcgtgccggcgactatggtcgggcagaagttcggcgacaagatcaggtactacgtc 60
|||||| | ||| |||| ||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 148 cacctcatcccgtcgacaatggtggggcagaagttcggcgacaagatcaggcactacgtc 207
Query: 61 cagacggacccgtcgccaacggcgaccatcgtgttccgcggcacagtcatcggcaagtcg 120
|||| |||||||| || |||||||||||||| |||| |||||| |||||||| ||||||
Sbjct: 208 aagacagacccgtccccgacggcgaccatcgtcttccacggcacggtcatcgggaagtcg 267
Query: 121 ccgtcggcgcctcgagtggcggcgttctcgagccgaggccccaactaccgcgcaccggag 180
||||| ||||| || || ||| |||| |||||||| ||||| |||| |||||| |||||
Sbjct: 268 ccgtccgcgccccgcgtcgcgtcgttttcgagccgcggcccaaactcccgcgcggcggag 327
Query: 181 atcctcaagcccgacgtcatcgccccgggcgtcaacatactcgcggcgtggaccggcgcc 240
||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||
Sbjct: 328 atcctcaagcccgacgtcacggcccccggcgtcaacatactcgcggcctggaccggcgag 387
Query: 241 gcctcccccaccgacctggacatcgactcgaggcgcgtggagttcaacatcatctccggc 300
|||||||| |||||||| ||||||||| |||||||||| ||||||||||||||||||
Sbjct: 388 gcctccccgaccgacctcgacatcgacccgaggcgcgt-ccgttcaacatcatctccggg 446
Query: 301 acgtccatgtcctgcccgcacgtgagcggcctcgccgcgctgctccgccaggcgcacccg 360
||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 447 acgtccatgtcgtgcccgcacgtgagcggcctcgcggcgctgctccggcaggcgcacccg 506
Query: 361 gagtggagccccgc 374
||||| ||||||||
Sbjct: 507 gagtgaagccccgc 520
>gb|CA716631.1|CA716631 wdk3c.pk026.n14 wdk3c Triticum aestivum cDNA clone wdk3c.pk026.n14
5' end, mRNA sequence
Length = 398
Score = 373 bits (188), Expect = e-102
Identities = 330/376 (87%), Gaps = 1/376 (0%)
Strand = Plus / Plus
Query: 1 cacctcgtgccggcgactatggtcgggcagaagttcggcgacaagatcaggtactacgtc 60
|||||| | ||| |||| ||||| |||||||| |||||||||||||||||| | ||||||
Sbjct: 24 cacctcatcccgtcgacaatggtggggcagaaattcggcgacaagatcaggcagtacgtc 83
Query: 61 cagacggacccgtcgccaacggcgaccatcgtgttccgcggcacagtcatcggcaagtcg 120
||| |||||||| || |||||||||||||| |||| |||||| |||||||| ||||||
Sbjct: 84 aagatcgacccgtccccgacggcgaccatcgtcttccacggcacggtcatcgggaagtcg 143
Query: 121 ccgtcggcgcctcgagtggcggcgttctcgagccgaggccccaactaccgcgcaccggag 180
||||| ||||| || || ||| | ||||||||||| |||||||||| |||||| |||||
Sbjct: 144 ccgtccgcgccgcgcgtcgcgtccttctcgagccgcggccccaactcccgcgcggcggag 203
Query: 181 atcctcaagcccgacgtcatcgccccgggcgtcaacatactcgcggcgtggaccggcgcc 240
||||||||||||||||||| || || ||||| |||||||||||||| ||||||||||
Sbjct: 204 atcctcaagcccgacgtcacggctcccggcgt-aacatactcgcggcatggaccggcgag 262
Query: 241 gcctcccccaccgacctggacatcgactcgaggcgcgtggagttcaacatcatctccggc 300
|||||||| |||||||| ||||||||| |||||||||| ||||||||||||||||||
Sbjct: 263 gcctccccgaccgacctcgacatcgacccgaggcgcgtcccgttcaacatcatctccggg 322
Query: 301 acgtccatgtcctgcccgcacgtgagcggcctcgccgcgctgctccgccaggcgcacccg 360
||||||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||||
Sbjct: 323 acgtccatgtcgtgcccgcacttgagcggcctcgcggcgctgctccggcaggcgcacccg 382
Query: 361 gagtggagccccgcgg 376
||||||||||||||||
Sbjct: 383 gagtggagccccgcgg 398
>gb|CA704068.1|CA704068 wdk1c.pk007.n9 wdk1c Triticum aestivum cDNA clone wdk1c.pk007.n9 5'
end, mRNA sequence
Length = 489
Score = 341 bits (172), Expect = 3e-092
Identities = 267/298 (89%), Gaps = 1/298 (0%)
Strand = Plus / Plus
Query: 143 cgttctcgagccgaggccccaactaccgcgcaccggagatcctcaagcccgacgtcatcg 202
||||||||||||| || ||||||| |||||| ||||||||||||||||||||||||| |
Sbjct: 12 cgttctcgagccgcggncccaactcccgcgcgccggagatcctcaagcccgacgtcacag 71
Query: 203 ccccgggcgtcaacatactcgcggcgtggaccggcgccgcctcccccaccgacctggaca 262
|||| ||||||||||||||||||| |||||||||| ||||||||||||||||| ||||
Sbjct: 72 cccccggcgtcaacatactcgcggactggaccggcgaggcctcccccaccgacctcgaca 131
Query: 263 tcgactcgaggcgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacg 322
||||| |||||||||| ||||||||||||||| || ||||||||||| ||||||||||
Sbjct: 132 tcgacccgaggcgcgtcccgttcaacatcatctcggggacgtccatgtcgtgcccgcacg 191
Query: 323 tgagcggcctcgccgcgctgctccgccaggcgcacccggagtgg-agccccgcggcgatc 381
||||||||||||| ||||||||||| |||||||||||||| ||| |||||| ||| | ||
Sbjct: 192 tgagcggcctcgcggcgctgctccggcaggcgcacccggactggaagccccacggtggtc 251
Query: 382 aagtcggcgctcatgaccacggcgtacaacctggacaactccggggaaaccatcaagg 439
||||||||||||||||||||||| |||||| ||||||||||||| || | ||||||||
Sbjct: 252 aagtcggcgctcatgaccacggcatacaacatggacaactccggngagatcatcaagg 309
>gb|BE405516.1|BE405516 WHE1212_C03_F06ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1212_C03_F06, mRNA
sequence
Length = 574
Score = 204 bits (103), Expect = 5e-051
Identities = 232/275 (84%)
Strand = Plus / Plus
Query: 137 tggcggcgttctcgagccgaggccccaactaccgcgcaccggagatcctcaagcccgacg 196
||||||| ||||||||||| || || |||| ||| || ||||||||| ||||||| ||||
Sbjct: 291 tggcggccttctcgagccgcgggccgaacttccgtgcgccggagatcttcaagccggacg 350
Query: 197 tcatcgccccgggcgtcaacatactcgcggcgtggaccggcgccgcctcccccaccgacc 256
| | || || ||||| |||| ||||| || ||||| |||||| ||| ||||| || |
Sbjct: 351 tgactgcgcccggcgtggacatcctcgccgcttggacaggcgccaactcgcccacagagc 410
Query: 257 tggacatcgactcgaggcgcgtggagttcaacatcatctccggcacgtccatgtcctgcc 316
| |||| |||| ||||||| ||| ||| ||||||||| || |||||||||||||| ||||
Sbjct: 411 tcgacagcgacacgaggcgggtgaagtacaacatcatatcgggcacgtccatgtcatgcc 470
Query: 317 cgcacgtgagcggcctcgccgcgctgctccgccaggcgcacccggagtggagccccgcgg 376
|||||||||||||| |||||||||||||||| |||||| || ||||||||||| ||||
Sbjct: 471 cgcacgtgagcggcatcgccgcgctgctccggcaggcgaggccagagtggagcccggcgg 530
Query: 377 cgatcaagtcggcgctcatgaccacggcgtacaac 411
|||||||||| |||||||||||||| |||||||||
Sbjct: 531 cgatcaagtccgcgctcatgaccaccgcgtacaac 565
>gb|CD896602.1|CD896602 G174.103F20F010822 G174 Triticum aestivum cDNA clone G174103F20,
mRNA sequence
Length = 618
Score = 159 bits (80), Expect = 2e-037
Identities = 137/156 (87%)
Strand = Plus / Plus
Query: 380 tcaagtcggcgctcatgaccacggcgtacaacctggacaactccggggaaaccatcaagg 439
||||||||||||||| |||||||||||||||||||||||||||||| || | ||||||||
Sbjct: 13 tcaagtcggcgctcaagaccacggcgtacaacctggacaactccggcgagatcatcaagg 72
Query: 440 acctcgcgacgggcgtggagtcgacgccgttcgtccgtggcgccggtcacgtcgacccca 499
|||| || || |||| ||||||||||||||||||| ||||| || ||||| |||||||
Sbjct: 73 acctggccaccggcgaccagtcgacgccgttcgtccgcggcgctgggcacgtggacccca 132
Query: 500 acgccgccctcgacccaaggctggtgtacgacgccg 535
|| ||| |||||||| ||||||||||||||||||
Sbjct: 133 acagcgcgctcgaccccgggctggtgtacgacgccg 168
>gb|CD929709.1|CD929709 GR45.108O17F010413 GR45 Triticum aestivum cDNA clone GR45108O17,
mRNA sequence
Length = 611
Score = 149 bits (75), Expect = 2e-034
Identities = 135/155 (87%)
Strand = Plus / Plus
Query: 271 aggcgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggc 330
||||| ||| ||| ||||||||| || |||||||||||||| ||||| ||||||||||||
Sbjct: 1 aggcgggtgaagtacaacatcatatcgggcacgtccatgtcatgcccacacgtgagcggc 60
Query: 331 ctcgccgcgctgctccgccaggcgcacccggagtggagccccgcggcgatcaagtcggcg 390
|||||||||||||||| |||||| || ||||||||||| ||||| |||||||| |||
Sbjct: 61 atcgccgcgctgctccggcaggcgaggccagagtggagcccggcggccatcaagtccgcg 120
Query: 391 ctcatgaccacggcgtacaacctggacaactccgg 425
|| |||||||| ||||||||| |||||| ||||||
Sbjct: 121 ctgatgaccaccgcgtacaacgtggacagctccgg 155
>gb|CA502546.1|CA502546 WHE4048_G12_N24ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4048_G12_N24, mRNA sequence
Length = 741
Score = 143 bits (72), Expect = 1e-032
Identities = 201/244 (82%)
Strand = Plus / Plus
Query: 175 ccggagatcctcaagcccgacgtcatcgccccgggcgtcaacatactcgcggcgtggacc 234
||||||||||||||||| ||||||| ||||| ||||| ||||||| || || |||||
Sbjct: 335 ccggagatcctcaagccggacgtcacggcccccggcgtggacatactggctgcctggaca 394
Query: 235 ggcgccgcctcccccaccgacctggacatcgactcgaggcgcgtggagttcaacatcatc 294
||||||||||| ||| | || ||| |||||||||||||||| ||| |||||||||
Sbjct: 395 ggcgccgcctcgccctcgctgctcgacggcgactcgaggcgcgtgcagtacaacatcatg 454
Query: 295 tccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctgctccgccaggcg 354
|| ||||| || || || ||||| || |||||||| |||| ||||||||||| ||||||
Sbjct: 455 tcgggcacctcgatatcgtgcccacagttgagcggcatcgcggcgctgctccggcaggcg 514
Query: 355 cacccggagtggagccccgcggcgatcaagtcggcgctcatgaccacggcgtacaacctg 414
||| |||||||||| |||||||||||||| || || |||||||| ||||||||| ||
Sbjct: 515 aggccgaagtggagcccggcggcgatcaagtccgccctgatgaccaccgcgtacaacgtg 574
Query: 415 gaca 418
||||
Sbjct: 575 gaca 578
Score = 46.1 bits (23), Expect = 0.002
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 487 cacgtcgaccccaacgccgccctcgacccaaggctggtgtacgacgccggc 537
||||| ||||||||| |||| ||| ||| ||||||||||||||||||||
Sbjct: 647 cacgtggaccccaaccgcgccaccgatccagggctggtgtacgacgccggc 697
>gb|BQ240187.1|BQ240187 TaE05021A03R TaE05 Triticum aestivum cDNA clone TaE05021A03R, mRNA
sequence
Length = 505
Score = 141 bits (71), Expect = 6e-032
Identities = 116/131 (88%)
Strand = Plus / Plus
Query: 1 cacctcgtgccggcgactatggtcgggcagaagttcggcgacaagatcaggtactacgtc 60
|||||| | ||| |||| ||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 370 cacctcatcccgtcgacaatggtggggcagaagttcggcgacaagatcaggcactacgtc 429
Query: 61 cagacggacccgtcgccaacggcgaccatcgtgttccgcggcacagtcatcggcaagtcg 120
|||| |||||||| || |||||||||||||| |||| |||||| |||||||| ||||||
Sbjct: 430 aagacagacccgtccccgacggcgaccatcgtcttccacggcacggtcatcgggaagtcg 489
Query: 121 ccgtcggcgcc 131
||||| |||||
Sbjct: 490 ccgtccgcgcc 500
>gb|BQ753043.1|BQ753043 WHE4122_C10_E20ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4122_C10_E20, mRNA sequence
Length = 674
Score = 135 bits (68), Expect = 4e-030
Identities = 167/200 (83%)
Strand = Plus / Plus
Query: 145 ttctcgagccgaggccccaactaccgcgcaccggagatcctcaagcccgacgtcatcgcc 204
||||||||||| || || |||| |||||| ||||||||| ||||||| ||||| | |||
Sbjct: 475 ttctcgagccgcgggccgaacttccgcgcgccggagatcttcaagccggacgtgaccgcg 534
Query: 205 ccgggcgtcaacatactcgcggcgtggaccggcgccgcctcccccaccgacctggacatc 264
|| ||||| |||| ||||| | ||||| |||||| ||| ||||| || || || | |
Sbjct: 535 cccggcgtggacatcctcgccggttggacaggcgccaactcgcccacggagctcgagagc 594
Query: 265 gactcgaggcgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgtg 324
||| ||||||||||| ||| ||||||||| || |||||||||||||| ||||||||||||
Sbjct: 595 gacacgaggcgcgtgaagtacaacatcatatcgggcacgtccatgtcatgcccgcacgtg 654
Query: 325 agcggcctcgccgcgctgct 344
|||||| |||||||||||||
Sbjct: 655 agcggcatcgccgcgctgct 674
>gb|BF484781.1|BF484781 WHE2319_F01_L01ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2319_F01_L01, mRNA sequence
Length = 694
Score = 133 bits (67), Expect = 1e-029
Identities = 172/207 (83%)
Strand = Plus / Plus
Query: 137 tggcggcgttctcgagccgaggccccaactaccgcgcaccggagatcctcaagcccgacg 196
||||||| ||||||||||| || || |||| ||| || ||||||||| ||||||| ||||
Sbjct: 488 tggcggccttctcgagccgcgggccgaacttccgtgcgccggagatcttcaagccggacg 547
Query: 197 tcatcgccccgggcgtcaacatactcgcggcgtggaccggcgccgcctcccccaccgacc 256
| | || || ||||| |||| ||||| || ||||| |||||| ||| ||||| || |
Sbjct: 548 tgactgcgcccggcgtggacatcctcgccgcttggacaggcgccaactcgcccacagagc 607
Query: 257 tggacatcgactcgaggcgcgtggagttcaacatcatctccggcacgtccatgtcctgcc 316
| |||| |||| ||||||| ||| ||| ||||||||| || |||||||||||||| ||||
Sbjct: 608 tcgacagcgacacgaggcgggtgaagtacaacatcatatcgggcacgtccatgtcatgcc 667
Query: 317 cgcacgtgagcggcctcgccgcgctgc 343
|||||||||||||| ||||||||||||
Sbjct: 668 cgcacgtgagcggcatcgccgcgctgc 694
>gb|BF483943.1|BF483943 WHE2305_F07_K13ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2305_F07_K13, mRNA sequence
Length = 364
Score = 127 bits (64), Expect = 9e-028
Identities = 103/116 (88%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 30 ttcaacatcatctccggcacgtccatgtcgtgcccgcacgtgagcggcctcgcggcgctg 89
Query: 343 ctccgccaggcgcacccggagtggagccccgcggcgatcaagtcggcgctcatgac 398
||| | ||||||||||||||||||||||| || || ||||||||||||||
Sbjct: 90 ctcaggagcgcgcacccggagtggagccccgccgccatacgctcggcgctcatgac 145
>gb|BQ803291.1|BQ803291 WHE2835_H09_P17ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2835_H09_P17, mRNA
sequence
Length = 766
Score = 127 bits (64), Expect = 9e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 291 catctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctgctccgcca 350
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 11 catctccggcacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggag 70
Query: 351 ggcgcacccggagtggagccccgc 374
|||||||||||||||||||||||
Sbjct: 71 cgcgcacccggagtggagccccgc 94
>gb|CA727027.1|CA727027 wde1f.pk002.p5 wde1f Triticum aestivum cDNA clone wde1f.pk002.p5 5'
end, mRNA sequence
Length = 610
Score = 127 bits (64), Expect = 9e-028
Identities = 111/127 (87%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||| ||||||||||||||||| | ||||||||||| ||||||||| ||||||
Sbjct: 269 ttcaacatcctctccggcacgtccatggcntgcccgcacgtctccggcctcgcggcgctg 328
Query: 343 ctccgccaggcgcacccggagtggagccccgcggcgatcaagtcggcgctcatgaccacg 402
||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 329 ctcaaggcggcgcacccgacgtggagccccgcggccatcaagtcggcgctcatgaccacg 388
Query: 403 gcgtaca 409
|| ||||
Sbjct: 389 gcctaca 395
>gb|CK210273.1|CK210273 FGAS022074 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1156
Score = 125 bits (63), Expect = 3e-027
Identities = 105/119 (88%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
|||||||| |||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 221 ttcaacataatctccggcacgtccatgtcgtgcccgcacgtgagcgggctggcggcgctg 280
Query: 343 ctccgccaggcgcacccggagtggagccccgcggcgatcaagtcggcgctcatgaccac 401
|||||| |||||||| ||| |||||||| ||||| ||| ||||||||| ||||||||
Sbjct: 281 ctccgcgcggcgcaccaggactggagcccggcggccatccggtcggcgctgatgaccac 339
Score = 48.1 bits (24), Expect = 6e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 181 atcctcaagcccgacgtcatcgccccgggcgtcaacatactcgcggcgtggaccgg 236
||||| ||||| ||| | ||||||||||| || ||||| |||||||||||| ||||
Sbjct: 119 atcctgaagccggacctgatcgccccgggggtgaacatcctcgcggcgtggtccgg 174
>gb|AL809485.1|AL809485 AL809485 a:11 Triticum aestivum cDNA clone E02_a11_plate_3, mRNA
sequence
Length = 469
Score = 125 bits (63), Expect = 3e-027
Identities = 105/119 (88%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
|||||||| |||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 21 ttcaacataatctccggcacgtccatgtcgtgcccgcacgtgagcgggctggcggcgctg 80
Query: 343 ctccgccaggcgcacccggagtggagccccgcggcgatcaagtcggcgctcatgaccac 401
|||||| |||||||| ||| |||||||| ||||| ||| ||||||||| ||||||||
Sbjct: 81 ctccgcgcggcgcaccaggactggagcccggcggccatccggtcggcgctgatgaccac 139
>gb|CV065870.1|CV065870 WNEL27g10 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL27g10 5' similar to Oryza sativa chromosome 3 BAC
OSJNBb0048A17 genomic sequence, complete sequence, mRNA
sequence
Length = 643
Score = 125 bits (63), Expect = 3e-027
Identities = 105/119 (88%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
|||||||| |||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 421 ttcaacataatctccggcacgtccatgtcgtgcccgcacgtgagcgggctggcggcgctg 480
Query: 343 ctccgccaggcgcacccggagtggagccccgcggcgatcaagtcggcgctcatgaccac 401
|||||| |||||||| ||| |||||||| ||||| ||| ||||||||| ||||||||
Sbjct: 481 ctccgcgcggcgcaccaggactggagcccggcggccatccggtcggcgctgatgaccac 539
>gb|CA701564.1|CA701564 wkm2c.pk006.j2 wkm2c Triticum aestivum cDNA clone wkm2c.pk006.j2 5'
end, mRNA sequence
Length = 569
Score = 123 bits (62), Expect = 1e-026
Identities = 110/126 (87%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||| || |||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 110 ttcaacatcatatcgggcacgtccatgtcgtgcccgcacgtgagcgggctggcggcgctg 169
Query: 343 ctccgccaggcgcacccggagtggagccccgcggcgatcaagtcggcgctcatgaccacg 402
||||| |||||||| ||| |||||||| ||||| ||| ||||||||| |||||||||
Sbjct: 170 ctccggtcggcgcaccaggactggagcccggcggccatccggtcggcgctgatgaccacg 229
Query: 403 gcgtac 408
||||||
Sbjct: 230 gcgtac 235
Score = 48.1 bits (24), Expect = 6e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 181 atcctcaagcccgacgtcatcgccccgggcgtcaacatactcgcggcgtggaccgg 236
||||||||||| ||| | ||||| ||||| || ||||| |||||||||||| ||||
Sbjct: 8 atcctcaagccggacctgatcgcgccgggggtgaacatcctcgcggcgtggtccgg 63
>gb|CK161226.1|CK161226 FGAS013791 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1139
Score = 115 bits (58), Expect = 3e-024
Identities = 120/141 (85%)
Strand = Plus / Plus
Query: 393 catgaccacggcgtacaacctggacaactccggggaaaccatcaaggacctcgcgacggg 452
|||||||||| |||||||||||||||||||||| || | || ||||||||| || || ||
Sbjct: 9 catgaccacgncgtacaacctggacaactccggcgagatcaccaaggacctggccaccgg 68
Query: 453 cgtggagtcgacgccgttcgtccgtggcgccggtcacgtcgaccccaacgccgccctcga 512
| ||||| ||||||||||| || |||||||| ||||| |||||||||| ||| |||||
Sbjct: 69 cacagagtccacgccgttcgtgcgcggcgccgggcacgtggaccccaacggcgcgctcga 128
Query: 513 cccaaggctggtgtacgacgc 533
||| | ||||||||||||||
Sbjct: 129 ccccggcctggtgtacgacgc 149
>gb|BF474935.1|BF474935 WHE2101_H01_O01ZS Wheat salt-stressed crown cDNA library Triticum
aestivum cDNA clone WHE2101_H01_O01, mRNA sequence
Length = 471
Score = 107 bits (54), Expect = 8e-022
Identities = 108/126 (85%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||| || |||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 82 ttcaacatcatatcgggcacgtccatgtcgtgcccgcacgtgagcgggctggcggcgctg 141
Query: 343 ctccgccaggcgcacccggagtggagccccgcggcgatcaagtcggcgctcatgaccacg 402
||||| |||||||| ||| |||||||| ||||| ||| ||||| ||| ||||| |||
Sbjct: 142 ctccggtcggcgcaccaggactggagcccggcggccatccggtcggggctgatgacgacg 201
Query: 403 gcgtac 408
||||||
Sbjct: 202 gcgtac 207
>gb|CD891933.1|CD891933 G118.118P21F010724 G118 Triticum aestivum cDNA clone G118118P21,
mRNA sequence
Length = 538
Score = 87.7 bits (44), Expect = 7e-016
Identities = 109/128 (85%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 282 gttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgct 341
|||||||||| |||| || ||||||||||||||||||||||| |||| | ||||||||
Sbjct: 348 gttcaacatcctctcagggacgtccatgtcctgcccgcacgtcgccggcgtggccgcgct 407
Query: 342 gctc-cgccaggcgcacccggagtggagccccgcggcgatcaagtcggcgctcatgacca 400
|||| | || || |||||||| |||||||| ||| ||||||||||||||| |||||||
Sbjct: 408 gctcaaggcaagc-cacccggactggagcccagcgcagatcaagtcggcgctgatgacca 466
Query: 401 cggcgtac 408
| ||||||
Sbjct: 467 ccgcgtac 474
Score = 46.1 bits (23), Expect = 0.002
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 177 ggagatcctcaagcccgacgtcatcgccccgggcgtcaacatactcgcggcgtggaccgg 236
||||||||||||||| ||| ||||||| || ||||| ||||| || || || |||| |||
Sbjct: 243 ggagatcctcaagccggacctcatcgcgcccggcgtgaacatcctggctgcatggagcgg 302
Query: 237 cgccgcc 243
|| ||||
Sbjct: 303 cgacgcc 309
>gb|CA483778.1|CA483778 WHE3205_A10_A19ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3205_A10_A19, mRNA sequence
Length = 164
Score = 85.7 bits (43), Expect = 3e-015
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||| || |||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 64 ttcaacatcatatcgggcacgtccatgtcgtgcccgcacgtgagcgggctggcggcgctg 123
Query: 343 ctccgccaggcgcacccggagtggagccccgcggc 377
||||| |||||||| || |||||||| |||||
Sbjct: 124 ctccggtcggcgcaccatgactggagcccggcggc 158
>gb|CA730536.1|CA730536 wip1c.pk005.a19 wip1c Triticum aestivum cDNA clone wip1c.pk005.a19
5' end, mRNA sequence
Length = 611
Score = 73.8 bits (37), Expect = 1e-011
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 313 tgcccgcacgtgagcggcctcgccgcgctgctccgccaggcgcacccggagtggagcccc 372
|||| |||||||||||| || || |||||||||||| |||||||| ||| ||||||||
Sbjct: 30 tgccggcacgtgagcgggctggcggcgctgctccgcgcggcgcaccaggactggagcccg 89
Query: 373 gcggcgatcaagtcggcgctcatgaccac 401
||||| ||| ||||||||| ||||||||
Sbjct: 90 gcggccatccggtcggcgctgatgaccac 118
Score = 60.0 bits (30), Expect = 2e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 296 ccggcacgtccatgtcctgcccgcacgtgagcgg 329
|||||||||||||||| |||||||||||||||||
Sbjct: 35 ccggcacgtccatgtcgtgcccgcacgtgagcgg 2
>gb|BQ803087.1|BQ803087 WHE2833_E09_I17ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2833_E09_I17, mRNA
sequence
Length = 443
Score = 69.9 bits (35), Expect = 2e-010
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 307 atgtcctgcccgcacgtgagcggcctcgccgcgctgctccgccaggcgcacccggagtgg 366
||||||||||||||| | ||||| || |||||||||||| ||||||||| | |||
Sbjct: 277 atgtcctgcccgcacatcagcggactggccgcgctgctcaaggcggcgcaccccaactgg 218
Query: 367 agccccgcggcgatcaagtcggcgctcatgaccac 401
||||| ||||| |||||||||||||| ||||||||
Sbjct: 217 agccctgcggccatcaagtcggcgctgatgaccac 183
>gb|BE499390.1|BE499390 WHE0973_A05_B09ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0973_A05_B09, mRNA sequence
Length = 565
Score = 65.9 bits (33), Expect = 3e-009
Identities = 101/121 (83%), Gaps = 2/121 (1%)
Strand = Plus / Plus
Query: 282 gttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgct 341
|||||||||| | || || ||||||||||| ||||||||||| |||| | ||||||||
Sbjct: 5 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgct 64
Query: 342 gctcc-gccaggcgcacccggagtggagccccgcggcgatcaagtcggcgctcatgacca 400
|||| | || || |||||||| |||||||| ||| ||||||||||||||| |||||||
Sbjct: 65 gctcaaggcaagc-cacccggactggagcccagcgcagatcaagtcggcgctgatgacca 123
Query: 401 c 401
|
Sbjct: 124 c 124
>gb|BQ805475.1|BQ805475 WHE3567_D07_G13ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3567_D07_G13, mRNA sequence
Length = 731
Score = 65.9 bits (33), Expect = 3e-009
Identities = 101/121 (83%), Gaps = 2/121 (1%)
Strand = Plus / Plus
Query: 282 gttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgct 341
|||||||||| | || || ||||||||||| ||||||||||| |||| | ||||||||
Sbjct: 535 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgct 594
Query: 342 gctcc-gccaggcgcacccggagtggagccccgcggcgatcaagtcggcgctcatgacca 400
|||| | || || |||||||| |||||||| ||| ||||||||||||||| |||||||
Sbjct: 595 gctcaaggcaagc-cacccggactggagcccagcgcagatcaagtcggcgctgatgacca 653
Query: 401 c 401
|
Sbjct: 654 c 654
Score = 46.1 bits (23), Expect = 0.002
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 177 ggagatcctcaagcccgacgtcatcgccccgggcgtcaacatactcgcggcgtggaccgg 236
||||||||||||||| ||| ||||||| || ||||| ||||| || || || |||| |||
Sbjct: 430 ggagatcctcaagccggacctcatcgcgcccggcgtgaacatcctggccgcatggagcgg 489
Query: 237 cgccgcc 243
|| ||||
Sbjct: 490 cgacgcc 496
>gb|CD919652.1|CD919652 G608.114B17F010911 G608 Triticum aestivum cDNA clone G608114B17,
mRNA sequence
Length = 707
Score = 65.9 bits (33), Expect = 3e-009
Identities = 101/121 (83%), Gaps = 2/121 (1%)
Strand = Plus / Plus
Query: 282 gttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgct 341
|||||||||| | || || ||||||||||| ||||||||||| |||| | ||||||||
Sbjct: 75 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgct 134
Query: 342 gctcc-gccaggcgcacccggagtggagccccgcggcgatcaagtcggcgctcatgacca 400
|||| | || || |||||||| |||||||| ||| ||||||||||||||| |||||||
Sbjct: 135 gctcaaggcaagc-cacccggactggagcccagcgcagatcaagtcggcgctgatgacca 193
Query: 401 c 401
|
Sbjct: 194 c 194
>gb|CK170497.1|CK170497 FGAS045415 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 1126
Score = 60.0 bits (30), Expect = 2e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 281 agttcaacatcatctccggcacgtccatgtcctgcccgcacg 322
||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 836 agttcaagatcatctccggcacgtccatgtcgtgcccacacg 795
Score = 42.1 bits (21), Expect = 0.039
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 355 cacccggagtggagccccgcg 375
|||||||||||||||||||||
Sbjct: 762 cacccggagtggagccccgcg 742
>gb|CK171254.1|CK171254 FGAS046430 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 1126
Score = 60.0 bits (30), Expect = 2e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 281 agttcaacatcatctccggcacgtccatgtcctgcccgcacg 322
||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 835 agttcaagatcatctccggcacgtccatgtcgtgcccacacg 794
Score = 48.1 bits (24), Expect = 6e-004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 355 cacccggagtggagccccgcggcg 378
||||||||||||||||||||||||
Sbjct: 761 cacccggagtggagccccgcggcg 738
>gb|CK172115.1|CK172115 FGAS047667 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 1197
Score = 60.0 bits (30), Expect = 2e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 281 agttcaacatcatctccggcacgtccatgtcctgcccgcacg 322
||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 834 agttcaagatcatctccggcacgtccatgtcgtgcccacacg 793
Score = 48.1 bits (24), Expect = 6e-004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 355 cacccggagtggagccccgcggcg 378
||||||||||||||||||||||||
Sbjct: 760 cacccggagtggagccccgcggcg 737
>gb|BF484203.1|BF484203 WHE2309_E07_I13ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2309_E07_I13, mRNA sequence
Length = 324
Score = 58.0 bits (29), Expect = 7e-007
Identities = 116/145 (80%)
Strand = Plus / Plus
Query: 145 ttctcgagccgaggccccaactaccgcgcaccggagatcctcaagcccgacgtcatcgcc 204
||||||||||| || || |||| |||||| ||||||||| ||||||| ||||| | |||
Sbjct: 180 ttctcgagccgcgggccaaacttccgcgcgccggagatcttcaagccggacgtgaccgcg 239
Query: 205 ccgggcgtcaacatactcgcggcgtggaccggcgccgcctcccccaccgacctggacatc 264
|| ||||| |||| ||||| || ||||| |||||| ||| ||||| || || || | |
Sbjct: 240 cccggcgtggacatcctcgccgcttggacaggcgccaactcacccacggagctcgagagc 299
Query: 265 gactcgaggcgcgtggagttcaaca 289
||| ||||||| ||| ||| |||||
Sbjct: 300 gacacgaggcgggtgaagtgcaaca 324
>gb|BF484791.1|BF484791 WHE2319_G01_N01ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2319_G01_N01, mRNA sequence
Length = 628
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 295 tccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgc 338
|||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 160 tccggcacgtccatgtccaccccgcacctgagcggcatcgccgc 203
Score = 44.1 bits (22), Expect = 0.010
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 373 gcggcgatcaagtcggcgctcatgac 398
||||| ||||||||||||||||||||
Sbjct: 238 gcggccatcaagtcggcgctcatgac 263
>gb|BQ247076.1|BQ247076 TaE15001F08R TaE15 Triticum aestivum cDNA clone TaE15001F08R, mRNA
sequence
Length = 569
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 295 tccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgc 338
|||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 465 tccggcacgtccatgtccaccccgcacctgagcggcatcgccgc 508
Score = 54.0 bits (27), Expect = 1e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 373 gcggcgatcaagtcggcgctcatgacc 399
|||||||||||||||||||||||||||
Sbjct: 543 gcggcgatcaagtcggcgctcatgacc 569
>gb|AL818815.1|AL818815 AL818815 l:125 Triticum aestivum cDNA clone D08_l125_plate_3, mRNA
sequence
Length = 596
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 295 tccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgc 338
|||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 315 tccggcacgtccatgtccaccccgcacctgagcggcatcgccgc 358
Score = 44.1 bits (22), Expect = 0.010
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 373 gcggcgatcaagtcggcgctcatgac 398
||||| ||||||||||||||||||||
Sbjct: 393 gcggccatcaagtcggcgctcatgac 418
>gb|BU672154.1|BU672154 WHE3301_C03_E05ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3301_C03_E05,
mRNA sequence
Length = 638
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 295 tccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgc 338
|||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 573 tccggcacgtccatgtccaccccgcacctgagcggcatcgccgc 616
>gb|CA717192.1|CA717192 wdk4c.pk0004.d3 wdk4c Triticum aestivum cDNA clone wdk4c.pk0004.d3
5' end, mRNA sequence
Length = 482
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 295 tccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgc 338
|||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 168 tccggcacgtccatgtccaccccgcacctgagcggcatcgccgc 211
Score = 40.1 bits (20), Expect = 0.15
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 380 tcaagtcggcgctcatgacc 399
||||||||||||||||||||
Sbjct: 254 tcaagtcggcgctcatgacc 273
>gb|CD900684.1|CD900684 G356.101G16F010906 G356 Triticum aestivum cDNA clone G356101G16,
mRNA sequence
Length = 619
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 295 tccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgc 338
|||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 16 tccggcacgtccatgtccaccccgcacctgagcggcatcgccgc 59
Score = 44.1 bits (22), Expect = 0.010
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 373 gcggcgatcaagtcggcgctcatgac 398
||||| ||||||||||||||||||||
Sbjct: 94 gcggccatcaagtcggcgctcatgac 119
>gb|CF133293.1|CF133293 WHE4356_C08_E16ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4356_C08_E16, mRNA sequence
Length = 670
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 295 tccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgc 338
|||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 271 tccggcacgtccatgtccaccccgcacctgagcggcatcgccgc 314
Score = 44.1 bits (22), Expect = 0.010
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 373 gcggcgatcaagtcggcgctcatgac 398
||||| ||||||||||||||||||||
Sbjct: 349 gcggccatcaagtcggcgctcatgac 374
>gb|CF133299.1|CF133299 WHE4356_D02_G04ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4356_D02_G04, mRNA sequence
Length = 639
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 295 tccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgc 338
|||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 78 tccggcacgtccatgtccaccccgcacctgagcggcatcgccgc 121
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 373 gcggcgatcaagtcggcgctcatgacc 399
||||| |||||||||||||||||||||
Sbjct: 156 gcggccatcaagtcggcgctcatgacc 182
>gb|CN009322.1|CN009322 WHE3857_D08_H15ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3857_D08_H15,
mRNA sequence
Length = 677
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 295 tccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgc 338
|||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 117 tccggcacgtccatgtccaccccgcacctgagcggcatcgccgc 160
Score = 54.0 bits (27), Expect = 1e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 373 gcggcgatcaagtcggcgctcatgacc 399
|||||||||||||||||||||||||||
Sbjct: 195 gcggcgatcaagtcggcgctcatgacc 221
>gb|BF202409.1|BF202409 WHE1764_C10_E20ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1764_C10_E20, mRNA sequence
Length = 425
Score = 54.0 bits (27), Expect = 1e-005
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 145 ttctcgagccgaggccccaactaccgcgcaccggagatcctcaagcccgacgtcatcgcc 204
||||||||||| || || |||| |||||| ||||||||| ||||||| ||||| | |||
Sbjct: 331 ttctcgagccgcgggccaaacttccgcgcgccggagatcttcaagccggacgtgaccgcg 390
Query: 205 ccgggcgtcaacatactcgcggcgtggaccggcgc 239
|| ||||| |||| ||||| || ||||| |||||
Sbjct: 391 cccggcgtggacatcctcgccgcttggacaggcgc 425
>gb|AL822551.1|AL822551 AL822551 p:234 Triticum aestivum cDNA clone H05_p234_plate_27, mRNA
sequence
Length = 379
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 285 caacatcatctccggcacgtccatgtcctgcccgcacgt 323
||||||||||||||| || |||||||| |||||||||||
Sbjct: 97 caacatcatctccgggacatccatgtcgtgcccgcacgt 135
>gb|BQ903392.1|BQ903392 Ta03_13f02_R
Ta03_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta03_13f02, mRNA
sequence
Length = 243
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 285 caacatcatctccggcacgtccatgtcctgcccgcacgt 323
||||||||||||||| || |||||||| |||||||||||
Sbjct: 242 caacatcatctccgggacatccatgtcgtgcccgcacgt 204
>gb|CD874616.1|CD874616 AZO3.102J24F011001 AZO3 Triticum aestivum cDNA clone AZO3102J24,
mRNA sequence
Length = 555
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 285 caacatcatctccggcacgtccatgtcctgcccgcacgt 323
||||||||||||||| || |||||||| |||||||||||
Sbjct: 371 caacatcatctccgggacatccatgtcgtgcccgcacgt 409
>gb|CD896208.1|CD896208 G174.102B20F010823 G174 Triticum aestivum cDNA clone G174102B20,
mRNA sequence
Length = 499
Score = 54.0 bits (27), Expect = 1e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 373 gcggcgatcaagtcggcgctcatgacc 399
|||||||||||||||||||||||||||
Sbjct: 18 gcggcgatcaagtcggcgctcatgacc 44
>gb|CD898723.1|CD898723 G174.109N19F010824 G174 Triticum aestivum cDNA clone G174109N19,
mRNA sequence
Length = 113
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 355 cacccggagtggagccccgcggcgatcaagtcggcgctcatgaccac 401
|||||||| |||||||| ||| ||||||||||||||| ||||||||
Sbjct: 31 cacccggactggagcccagcgcagatcaagtcggcgctgatgaccac 77
>gb|AL809759.1|AL809759 AL809759 a:11 Triticum aestivum cDNA clone A07_a11_plate_9, mRNA
sequence
Length = 527
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 355 cacccggagtggagccccgcggcgatcaagtcggcgctcatgaccac 401
|||||||| |||||||| ||| ||||||||||||||| ||||||||
Sbjct: 222 cacccggactggagcccagcgcagatcaagtcggcgctgatgaccac 268
Score = 46.1 bits (23), Expect = 0.002
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 177 ggagatcctcaagcccgacgtcatcgccccgggcgtcaacatactcgcggcgtggaccgg 236
||||||||||||||| ||| ||||||| || ||||| ||||| || || || |||| |||
Sbjct: 39 ggagatcctcaagccggacctcatcgcgcccggcgtgaacatcctggccgcatggagcgg 98
Query: 237 cgccgcc 243
|| ||||
Sbjct: 99 cgacgcc 105
>gb|CD879521.1|CD879521 AZO4.105I10R011123 AZO4 Triticum aestivum cDNA clone AZO4105I10,
mRNA sequence
Length = 714
Score = 50.1 bits (25), Expect = 2e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 374 cggcgatcaagtcggcgctcatgaccacggcgtacaacctggaca 418
||||||||||||| || || |||||||| ||||||||| ||||||
Sbjct: 680 cggcgatcaagtccgccctgatgaccaccgcgtacaacgtggaca 636
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 166,471
Number of Sequences: 636343
Number of extensions: 166471
Number of successful extensions: 49929
Number of sequences better than 0.5: 69
Number of HSP's better than 0.5 without gapping: 68
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 49773
Number of HSP's gapped (non-prelim): 147
length of query: 545
length of database: 367,240,239
effective HSP length: 19
effective length of query: 526
effective length of database: 355,149,722
effective search space: 186808753772
effective search space used: 186808753772
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)