BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 5532690.2.1
(863 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA485850.1|CA485850 WHE4323_H03_P05ZS Wheat meiotic anth... 410 e-113
gb|CV763270.1|CV763270 FGAS057659 Triticum aestivum FGAS: L... 172 3e-041
gb|CV764541.1|CV764541 FGAS058926 Triticum aestivum FGAS: L... 172 3e-041
gb|CN011106.1|CN011106 WHE3880_A04_A08ZS Wheat Fusarium gra... 165 6e-039
gb|CA741859.1|CA741859 wia1c.pk002.g14 wia1c Triticum aesti... 155 6e-036
gb|CD938126.1|CD938126 OV.109C04F010309 OV Triticum aestivu... 155 6e-036
gb|CV778804.1|CV778804 FGAS073213 Triticum aestivum FGAS: L... 155 6e-036
gb|CA640254.1|CA640254 wre1n.pk0033.a6 wre1n Triticum aesti... 139 4e-031
gb|BQ743737.1|BQ743737 WHE4107_E11_J21ZS Wheat salt-stresse... 133 2e-029
gb|CA736670.1|CA736670 wpi1s.pk008.m22 wpi1s Triticum aesti... 92 8e-017
gb|CA744917.1|CA744917 wri1s.pk009.h10 wri1s Triticum aesti... 78 1e-012
gb|CD938127.1|CD938127 OV.109C04R010406 OV Triticum aestivu... 78 1e-012
gb|CA642384.1|CA642384 wre1n.pk0054.b10 wre1n Triticum aest... 62 7e-008
gb|AJ613992.1|AJ613992 AJ613992 Triticum turgidum subsp. du... 56 4e-006
gb|CA643729.1|CA643729 wre1n.pk0079.a11 wre1n Triticum aest... 48 0.001
gb|CA742563.1|CA742563 wri1s.pk001.a8 wri1s Triticum aestiv... 48 0.001
gb|CA616183.1|CA616183 wr1.pk174.c1 wr1 Triticum aestivum c... 42 0.063
gb|CV780814.1|CV780814 FGAS075225 Triticum aestivum FGAS: L... 42 0.063
gb|BQ242528.1|BQ242528 TaE15027C05F TaE15 Triticum aestivum... 40 0.25
gb|CA745202.1|CA745202 wri1s.pk003.l6 wri1s Triticum aestiv... 40 0.25
>gb|CA485850.1|CA485850 WHE4323_H03_P05ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4323_H03_P05, mRNA sequence
Length = 597
Score = 410 bits (207), Expect = e-113
Identities = 249/263 (94%)
Strand = Plus / Minus
Query: 601 gaatatttggagtaacttaaaccatatccaaagccatacactacatctccagtgtaaaat 660
||||||| ||||||||||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 593 gaatattgggagtaacttaaaccgtatccaaaaccatacactacatcgccagtgtaaaat 534
Query: 661 cgatatgttctcccagggtagcctcgtgaaggatcagctctcatgttcatatcagtcatg 720
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 533 cgatatgttctcccagggtagcctcgtgaagggtcagctctcatgttcatatcagtcatc 474
Query: 721 ggaatagcagtaaaggattcaggataccaagttataggcagctttcctcctgggttgtac 780
|||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||
Sbjct: 473 ggaatagcagtaaaggattcgggataccaagtcatagccagctttcctcctgggttgtac 414
Query: 781 tctccaaaaagaatttctggaaggacttgtccaccaacctcgccaggatatccgagccaa 840
||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 413 tctccaaaaagaatttccggaaggacctgtccaccaacctcaccaggatatccgagccaa 354
Query: 841 agaatgcttgcgattcgcggatc 863
||||||||||| ||||| |||||
Sbjct: 353 agaatgcttgcaattcgtggatc 331
>gb|CV763270.1|CV763270 FGAS057659 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 834
Score = 172 bits (87), Expect = 3e-041
Identities = 165/191 (86%)
Strand = Plus / Minus
Query: 643 acatctccagtgtaaaatcgatatgttctcccagggtagcctcgtgaaggatcagctctc 702
|||||||| ||||| || ||||||||||| ||||||||||| || ||||| || ||||||
Sbjct: 561 acatctccggtgtagaaccgatatgttcttccagggtagccacgcgaagggtcggctctc 502
Query: 703 atgttcatatcagtcatgggaatagcagtaaaggattcaggataccaagttataggcagc 762
||||||||||| ||||| |||| || || |||||||| || |||||||| |||| || |
Sbjct: 501 atgttcatatcggtcattggaaccgcggtgaaggattcggggtaccaagtcatagtcaac 442
Query: 763 tttcctcctgggttgtactctccaaaaagaatttctggaaggacttgtccaccaacctcg 822
||||||||||| |||||||||||||||||||||||||| || || ||||| ||||| ||
Sbjct: 441 tttcctcctggattgtactctccaaaaagaatttctgggagaacctgtccgccaacttcc 382
Query: 823 ccaggatatcc 833
|||||||||||
Sbjct: 381 ccaggatatcc 371
>gb|CV764541.1|CV764541 FGAS058926 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 836
Score = 172 bits (87), Expect = 3e-041
Identities = 165/191 (86%)
Strand = Plus / Minus
Query: 643 acatctccagtgtaaaatcgatatgttctcccagggtagcctcgtgaaggatcagctctc 702
|||||||| ||||| || ||||||||||| ||||||||||| || ||||| || ||||||
Sbjct: 573 acatctccggtgtagaaccgatatgttcttccagggtagccacgcgaagggtcggctctc 514
Query: 703 atgttcatatcagtcatgggaatagcagtaaaggattcaggataccaagttataggcagc 762
||||||||||| ||||| |||| || || |||||||| || |||||||| |||| || |
Sbjct: 513 atgttcatatcggtcattggaaccgcggtgaaggattcggggtaccaagtcatagtcaac 454
Query: 763 tttcctcctgggttgtactctccaaaaagaatttctggaaggacttgtccaccaacctcg 822
||||||||||| |||||||||||||||||||||||||| || || ||||| ||||| ||
Sbjct: 453 tttcctcctggattgtactctccaaaaagaatttctgggagaacctgtccgccaacttcc 394
Query: 823 ccaggatatcc 833
|||||||||||
Sbjct: 393 ccaggatatcc 383
>gb|CN011106.1|CN011106 WHE3880_A04_A08ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3880_A04_A08,
mRNA sequence
Length = 723
Score = 165 bits (83), Expect = 6e-039
Identities = 164/191 (85%)
Strand = Plus / Minus
Query: 643 acatctccagtgtaaaatcgatatgttctcccagggtagcctcgtgaaggatcagctctc 702
|||||||| ||||| || ||||||||||| ||||||||||| || ||||| || ||||||
Sbjct: 516 acatctccggtgtagaaccgatatgttcttccagggtagccgcgcgaagggtcggctctc 457
Query: 703 atgttcatatcagtcatgggaatagcagtaaaggattcaggataccaagttataggcagc 762
||||||||||| ||||| |||| ||||| |||||||| || |||||||| |||| || |
Sbjct: 456 atgttcatatcggtcattggaaccgcagtgaaggattcggggtaccaagtcatagtcaac 397
Query: 763 tttcctcctgggttgtactctccaaaaagaatttctggaaggacttgtccaccaacctcg 822
||||||||||| ||||||||||| |||||||||||||| || ||||| || ||||| ||
Sbjct: 396 tttcctcctggattgtactctccgaaaagaatttctgggagaacttgaccgccaacttcc 337
Query: 823 ccaggatatcc 833
|| ||||||||
Sbjct: 336 cctggatatcc 326
Score = 46.1 bits (23), Expect = 0.004
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 509 agtctagtccatccctccttgtgtatgcaggctttctgctgat 551
|||| ||||| ||||||| ||||||||||||||| || |||||
Sbjct: 662 agtccagtccgtccctccgtgtgtatgcaggcttcctactgat 620
>gb|CA741859.1|CA741859 wia1c.pk002.g14 wia1c Triticum aestivum cDNA clone wia1c.pk002.g14
5' end, mRNA sequence
Length = 594
Score = 155 bits (78), Expect = 6e-036
Identities = 162/190 (85%)
Strand = Plus / Minus
Query: 644 catctccagtgtaaaatcgatatgttctcccagggtagcctcgtgaaggatcagctctca 703
||||||| ||||| || ||||||||||| ||||||||||| || |||| || |||||||
Sbjct: 289 catctccggtgtagaaccgatatgttcttccagggtagccgcgcaaagggtcggctctca 230
Query: 704 tgttcatatcagtcatgggaatagcagtaaaggattcaggataccaagttataggcagct 763
|||||||||| ||||| |||| ||||| ||||||||||| |||||||| || |||| |
Sbjct: 229 tgttcatatcggtcattggaaccgcagtgaaggattcagggtaccaagtgatgggcaatt 170
Query: 764 ttcctcctgggttgtactctccaaaaagaatttctggaaggacttgtccaccaacctcgc 823
|||||||||| ||||||||||| |||||||||||||| || ||||| || ||||| || |
Sbjct: 169 ttcctcctggattgtactctccgaaaagaatttctgggagaacttgcccgccaacttctc 110
Query: 824 caggatatcc 833
| ||||||||
Sbjct: 109 ctggatatcc 100
Score = 40.1 bits (20), Expect = 0.25
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 520 tccctccttgtgtatgcaggctttctgctgat 551
||||||| ||||||||||||||| || |||||
Sbjct: 425 tccctccgtgtgtatgcaggcttcctactgat 394
>gb|CD938126.1|CD938126 OV.109C04F010309 OV Triticum aestivum cDNA clone OV109C04, mRNA
sequence
Length = 720
Score = 155 bits (78), Expect = 6e-036
Identities = 162/190 (85%)
Strand = Plus / Minus
Query: 644 catctccagtgtaaaatcgatatgttctcccagggtagcctcgtgaaggatcagctctca 703
||||||| ||||| || ||||||||||| ||||||||||| || |||| || |||||||
Sbjct: 360 catctccggtgtagaaccgatatgttcttccagggtagccgcgcaaagggtcggctctca 301
Query: 704 tgttcatatcagtcatgggaatagcagtaaaggattcaggataccaagttataggcagct 763
|||||||||| ||||| |||| ||||| ||||||||||| |||||||| || |||| |
Sbjct: 300 tgttcatatcggtcattggaaccgcagtgaaggattcagggtaccaagtgatgggcaatt 241
Query: 764 ttcctcctgggttgtactctccaaaaagaatttctggaaggacttgtccaccaacctcgc 823
|||||||||| ||||||||||| |||||||||||||| || ||||| || ||||| || |
Sbjct: 240 ttcctcctggattgtactctccgaaaagaatttctgggagaacttgcccgccaacttctc 181
Query: 824 caggatatcc 833
| ||||||||
Sbjct: 180 ctggatatcc 171
Score = 54.0 bits (27), Expect = 2e-005
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 334 gtgtggacacgctcaaagccaaccagctgttttataggaaagcccgggacgcttgatttc 393
|||| ||| ||||| || ||||||||||| || | ||| ||||| || || || || |||
Sbjct: 682 gtgtagacgcgctcgaaaccaaccagctgcttcagagggaagccaggaaccctcgacttc 623
Query: 394 gatctcgcgaacagaagaacagcatgactcccatccatg 432
|||||||||||||| ||||| || || ||||| ||||||
Sbjct: 622 gatctcgcgaacagtagaacggcgtggctcccgtccatg 584
>gb|CV778804.1|CV778804 FGAS073213 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 836
Score = 155 bits (78), Expect = 6e-036
Identities = 162/190 (85%)
Strand = Plus / Minus
Query: 644 catctccagtgtaaaatcgatatgttctcccagggtagcctcgtgaaggatcagctctca 703
||||||| ||||| || ||||||||||| ||||||||||| || |||| || |||||||
Sbjct: 653 catctccggtgtagaaccgatatgttcttccagggtagccgcgcaaagggtcggctctca 594
Query: 704 tgttcatatcagtcatgggaatagcagtaaaggattcaggataccaagttataggcagct 763
|||||||||| ||||| |||| ||||| ||||||||||| |||||||| || |||| |
Sbjct: 593 tgttcatatcggtcattggaaccgcagtgaaggattcagggtaccaagtgatgggcaatt 534
Query: 764 ttcctcctgggttgtactctccaaaaagaatttctggaaggacttgtccaccaacctcgc 823
|||||||||| ||||||||||| |||||||||||||| || ||||| || ||||| || |
Sbjct: 533 ttcctcctggattgtactctccgaaaagaatttctgggagaacttgcccgccaacttctc 474
Query: 824 caggatatcc 833
| ||||||||
Sbjct: 473 ctggatatcc 464
>gb|CA640254.1|CA640254 wre1n.pk0033.a6 wre1n Triticum aestivum cDNA clone wre1n.pk0033.a6
5' end, mRNA sequence
Length = 560
Score = 139 bits (70), Expect = 4e-031
Identities = 149/174 (85%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 661 cgatatgttctcccagggtagcctcgtgaaggatcagctctcatgttcatatcagtcatg 720
||||||||||| ||||||||||| || ||||| || ||||||||||||||||| |||||
Sbjct: 301 cgatatgttcttccagggtagccgcgcgaagggtcggctctcatgttcatatcggtcatt 242
Query: 721 ggaatagcagtaaaggattcaggata-ccaagttataggcagctttcctcctgggttgta 779
|||| ||||| |||||||| || || |||||| |||| || |||||||||||| |||||
Sbjct: 241 ggaaccgcagtgaaggattcggggtacccaagtcatagtcaactttcctcctggattgta 182
Query: 780 ctctccaaaaagaatttctggaaggacttgtccaccaacctcgccaggatatcc 833
|||||| |||||||||||||| || ||||| || ||||| || || ||||||||
Sbjct: 181 ctctccgaaaagaatttctgggagaacttgaccgccaacttcccctggatatcc 128
>gb|BQ743737.1|BQ743737 WHE4107_E11_J21ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4107_E11_J21, mRNA sequence
Length = 537
Score = 133 bits (67), Expect = 2e-029
Identities = 136/159 (85%)
Strand = Plus / Minus
Query: 675 agggtagcctcgtgaaggatcagctctcatgttcatatcagtcatgggaatagcagtaaa 734
||||||||| || ||||| || ||||||||||||||||| ||||| |||| ||||| ||
Sbjct: 537 agggtagccgcgcgaagggtcggctctcatgttcatatcggtcattggaaccgcagtgaa 478
Query: 735 ggattcaggataccaagttataggcagctttcctcctgggttgtactctccaaaaagaat 794
|||||| || |||||||| |||| || |||||||||||| ||||||||||| ||||||||
Sbjct: 477 ggattcggggtaccaagtcatagtcaactttcctcctggattgtactctccgaaaagaat 418
Query: 795 ttctggaaggacttgtccaccaacctcgccaggatatcc 833
|||||| || ||||| || ||||| || || ||||||||
Sbjct: 417 ttctgggagaacttgaccgccaacttcccctggatatcc 379
>gb|CA736670.1|CA736670 wpi1s.pk008.m22 wpi1s Triticum aestivum cDNA clone wpi1s.pk008.m22
5' end, mRNA sequence
Length = 424
Score = 91.7 bits (46), Expect = 8e-017
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 643 acatctccagtgtaaaatcgatatgttctcccagggtagcctcgtgaaggatcagctctc 702
|||||||| ||||| || ||||||||||| ||||||||||| || ||||| || ||||||
Sbjct: 61 acatctccggtgtagaaccgatatgttcttccagggtagccgcgcgaagggtcggctctc 120
Query: 703 atgttcatatcagtcatgggaatagcagtaaaggattc 740
||||||||||| ||||| |||| ||||| ||||||||
Sbjct: 121 atgttcatatcggtcattggaaccgcagtgaaggattc 158
>gb|CA744917.1|CA744917 wri1s.pk009.h10 wri1s Triticum aestivum cDNA clone wri1s.pk009.h10
5' end, mRNA sequence
Length = 506
Score = 77.8 bits (39), Expect = 1e-012
Identities = 147/183 (80%)
Strand = Plus / Plus
Query: 250 acccttttgccttcaggattggctgcgctcatatgcttgcaggggtcaacagtaatctcc 309
|||||| ||||||||| ||||| |||||||||||||||||||| || || | ||||||
Sbjct: 151 acccttctgccttcagtgttggccgcgctcatatgcttgcagggatccaccttgatctcc 210
Query: 310 acactggatgcactgccagccgccgtgtggacacgctcaaagccaaccagctgttttata 369
| ||| || ||||| || || |||| ||| ||||| || ||||||||||| || | |
Sbjct: 211 atgttggttgatctgccggcggcagtgtagacgcgctcgaaaccaaccagctgcttcaga 270
Query: 370 ggaaagcccgggacgcttgatttcgatctcgcgaacagaagaacagcatgactcccatcc 429
|| ||||| || || || || ||||||||||||||||| ||||| || || ||||| |||
Sbjct: 271 gggaagccaggaaccctcgacttcgatctcgcgaacagtagaacggcgtggctcccgtcc 330
Query: 430 atg 432
|||
Sbjct: 331 atg 333
>gb|CD938127.1|CD938127 OV.109C04R010406 OV Triticum aestivum cDNA clone OV109C04, mRNA
sequence
Length = 675
Score = 77.8 bits (39), Expect = 1e-012
Identities = 147/183 (80%)
Strand = Plus / Plus
Query: 250 acccttttgccttcaggattggctgcgctcatatgcttgcaggggtcaacagtaatctcc 309
|||||| ||||||||| ||||| |||||||||||||||||||| || || | ||||||
Sbjct: 227 acccttctgccttcagtgttggccgcgctcatatgcttgcagggatccaccttgatctcc 286
Query: 310 acactggatgcactgccagccgccgtgtggacacgctcaaagccaaccagctgttttata 369
| ||| || ||||| || || |||| ||| ||||| || ||||||||||| || | |
Sbjct: 287 atgttggttgatctgccggcggcagtgtagacgcgctcgaaaccaaccagctgcttcaga 346
Query: 370 ggaaagcccgggacgcttgatttcgatctcgcgaacagaagaacagcatgactcccatcc 429
|| ||||| || || || || ||||||||||||||||| ||||| || || ||||| |||
Sbjct: 347 gggaagccaggaaccctcgacttcgatctcgcgaacagtagaacggcgtggctcccgtcc 406
Query: 430 atg 432
|||
Sbjct: 407 atg 409
>gb|CA642384.1|CA642384 wre1n.pk0054.b10 wre1n Triticum aestivum cDNA clone
wre1n.pk0054.b10 5' end, mRNA sequence
Length = 559
Score = 61.9 bits (31), Expect = 7e-008
Identities = 146/183 (79%), Gaps = 1/183 (0%)
Strand = Plus / Minus
Query: 250 acccttttgccttcaggattggctgcgctcatatgcttgcaggggtcaacagtaatctcc 309
|||||| ||||||||| ||||| |||||||| ||||||||||| || || | ||||||
Sbjct: 365 acccttctgccttcagtgttggccgcgctcatgtgcttgcagggatccac-ttgatctcc 307
Query: 310 acactggatgcactgccagccgccgtgtggacacgctcaaagccaaccagctgttttata 369
|| ||| || ||||| || || |||| ||| ||||| || ||||||||||| || | |
Sbjct: 306 acgttggttgatctgccggcagcagtgtagacgcgctcgaaaccaaccagctgcttcaga 247
Query: 370 ggaaagcccgggacgcttgatttcgatctcgcgaacagaagaacagcatgactcccatcc 429
|| ||||| || || ||||| |||||||||| |||||| || || || || ||||| |||
Sbjct: 246 gggaagccaggaacccttgacttcgatctcgtgaacagcaggacggcgtggctcccgtcc 187
Query: 430 atg 432
|||
Sbjct: 186 atg 184
>gb|AJ613992.1|AJ613992 AJ613992 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 09593R, mRNA
sequence
Length = 518
Score = 56.0 bits (28), Expect = 4e-006
Identities = 146/184 (79%), Gaps = 1/184 (0%)
Strand = Plus / Minus
Query: 250 acccttttgccttcaggattggctgcgctcatatgcttgcaggggtcaacagtaatctcc 309
|||||| ||||||||| ||||| |||||||| ||||||||||| || || | ||||||
Sbjct: 258 acccttctgccttcagtgttggccgcgctcatgtgcttgcagggatccaccttgatctcc 199
Query: 310 acactggatgcactgccagccgc-cgtgtggacacgctcaaagccaaccagctgttttat 368
|| ||| || ||||| || || |||| ||| ||||| || ||||||||||| || |
Sbjct: 198 acgttggttgatctgccggcagcaggtgtagacgcgctcgaaaccaaccagctgcttcag 139
Query: 369 aggaaagcccgggacgcttgatttcgatctcgcgaacagaagaacagcatgactcccatc 428
||| ||||| || || ||||| |||||||||| |||||| || || || || ||||| ||
Sbjct: 138 agggaagccaggaacccttgacttcgatctcgtgaacagcaggacggcgtggctcccgtc 79
Query: 429 catg 432
||||
Sbjct: 78 catg 75
>gb|CA643729.1|CA643729 wre1n.pk0079.a11 wre1n Triticum aestivum cDNA clone
wre1n.pk0079.a11 5' end, mRNA sequence
Length = 358
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 250 acccttttgccttcaggattggctgcgctcatatgcttgcaggg 293
|||||| ||||||||| ||||| |||||||| |||||||||||
Sbjct: 226 acccttctgccttcagtgttggccgcgctcatgtgcttgcaggg 269
>gb|CA742563.1|CA742563 wri1s.pk001.a8 wri1s Triticum aestivum cDNA clone wri1s.pk001.a8 5'
end, mRNA sequence
Length = 271
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 250 acccttttgccttcaggattggctgcgctcatatgcttgcaggg 293
|||||| ||||||||| ||||| |||||||| |||||||||||
Sbjct: 151 acccttctgccttcagtgttggccgcgctcatgtgcttgcaggg 194
>gb|CA616183.1|CA616183 wr1.pk174.c1 wr1 Triticum aestivum cDNA clone wr1.pk174.c1 5' end,
mRNA sequence
Length = 562
Score = 42.1 bits (21), Expect = 0.063
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 250 acccttttgccttcaggattgg-ctgcgctcatatgcttgcaggg 293
|||||| ||||||||| |||| | ||||||||||||||||||||
Sbjct: 253 acccttctgccttcagtgttgggccgcgctcatatgcttgcaggg 297
>gb|CV780814.1|CV780814 FGAS075225 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 858
Score = 42.1 bits (21), Expect = 0.063
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 553 atgcccaacgacacggtgatc 573
|||||||||||||||||||||
Sbjct: 419 atgcccaacgacacggtgatc 439
>gb|BQ242528.1|BQ242528 TaE15027C05F TaE15 Triticum aestivum cDNA clone TaE15027C05F, mRNA
sequence
Length = 354
Score = 40.1 bits (20), Expect = 0.25
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 134 ttattcccaactttgaactc 153
||||||||||||||||||||
Sbjct: 38 ttattcccaactttgaactc 57
>gb|CA745202.1|CA745202 wri1s.pk003.l6 wri1s Triticum aestivum cDNA clone wri1s.pk003.l6 5'
end, mRNA sequence
Length = 211
Score = 40.1 bits (20), Expect = 0.25
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 520 tccctccttgtgtatgcaggctttctgctgat 551
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Sbjct: 113 tccctccgtgtgtatgcaggcttcctactgat 82
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 136,512
Number of Sequences: 636343
Number of extensions: 136512
Number of successful extensions: 34178
Number of sequences better than 0.5: 20
Number of HSP's better than 0.5 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34128
Number of HSP's gapped (non-prelim): 49
length of query: 863
length of database: 367,240,239
effective HSP length: 19
effective length of query: 844
effective length of database: 355,149,722
effective search space: 299746365368
effective search space used: 299746365368
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)