BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3995470.2.1
(744 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ300649.1|BJ300649 BJ300649 Y. Ogihara unpublished cDNA... 220 1e-055
gb|BJ212167.1|BJ212167 BJ212167 Y. Ogihara unpublished cDNA... 109 3e-022
gb|BG262604.1|BG262604 WHE0938_B02_C04ZS Wheat 5-15 DAP spi... 107 1e-021
gb|CA730249.1|CA730249 wip1c.pk003.b11 wip1c Triticum aesti... 107 1e-021
gb|BJ219746.1|BJ219746 BJ219746 Y. Ogihara unpublished cDNA... 88 1e-015
gb|CA731498.1|CA731498 wip1c.pk006.f21 wip1c Triticum aesti... 88 1e-015
gb|BJ212287.1|BJ212287 BJ212287 Y. Ogihara unpublished cDNA... 80 2e-013
gb|BJ282051.1|BJ282051 BJ282051 Y. Ogihara unpublished cDNA... 66 4e-009
gb|BJ287183.1|BJ287183 BJ287183 Y. Ogihara unpublished cDNA... 66 4e-009
gb|BQ903204.1|BQ903204 Ta03_10h11_R Ta03_AAFC_ECORC_Fusariu... 66 4e-009
gb|CA632062.1|CA632062 wle1n.pk0058.d12 wle1n Triticum aest... 66 4e-009
gb|CA638827.1|CA638827 wre1n.pk0016.d10 wre1n Triticum aest... 66 4e-009
gb|BF485412.1|BF485412 WHE2311_D02_H03ZS Wheat pre-anthesis... 62 6e-008
gb|BE406008.1|BE406008 WHE0404_c03_c03zB Wheat etiolated se... 48 9e-004
gb|CA629477.1|CA629477 wle1n.pk0022.e12 wle1n Triticum aest... 48 9e-004
gb|CD890767.1|CD890767 G118.115G08F010718 G118 Triticum aes... 48 9e-004
gb|CD894267.1|CD894267 G118.125N11F010829 G118 Triticum aes... 48 9e-004
gb|CD897751.1|CD897751 G174.106P23F010823 G174 Triticum aes... 48 9e-004
gb|CD931742.1|CD931742 GR45.115G14F010420 GR45 Triticum aes... 48 9e-004
gb|CN012664.1|CN012664 WHE3951_D07_G13ZS Wheat Fusarium gra... 44 0.014
gb|BE430737.1|BE430737 SUN007.G05F991221 ITEC SUN Wheat cDN... 40 0.21
gb|BF201483.1|BF201483 WHE1771_B05_C09ZS Wheat pre-anthesis... 40 0.21
gb|BM137237.1|BM137237 WHE2631_C06_F11ZS Wheat Fusarium gra... 40 0.21
gb|CA716581.1|CA716581 wdk3c.pk026.b6 wdk3c Triticum aestiv... 40 0.21
gb|CD893118.1|CD893118 G118.122O05F010725 G118 Triticum aes... 40 0.21
gb|CD896218.1|CD896218 G174.102C08R011120 G174 Triticum aes... 40 0.21
gb|CD928594.1|CD928594 GR45.105F09F010319 GR45 Triticum aes... 40 0.21
gb|CK171445.1|CK171445 FGAS046704 Triticum aestivum FGAS: T... 40 0.21
gb|CK208291.1|CK208291 FGAS019992 Triticum aestivum FGAS: L... 40 0.21
gb|AJ610372.1|AJ610372 AJ610372 Triticum turgidum subsp. du... 40 0.21
gb|CN010979.1|CN010979 WHE3878_D12_H24ZS Wheat Fusarium gra... 40 0.21
>gb|BJ300649.1|BJ300649 BJ300649 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd3i08 5', mRNA sequence
Length = 633
Score = 220 bits (111), Expect = 1e-055
Identities = 213/247 (86%)
Strand = Plus / Plus
Query: 87 gccgacgtggcaggatcagcgacgacgagatcaacgagctgatctccaagctccaggctc 146
|||| ||||||||||||| |||||| |||||||||||||| ||||||||||||||||| |
Sbjct: 141 gccgccgtggcaggatcaccgacgaggagatcaacgagctcatctccaagctccaggcgc 200
Query: 147 tcctcccggaatcctcacgccgccggaacgcgagccggtcgtcggcgtcgaagcttctga 206
| |||||||||| || |||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 201 tggtcccggaatcatcccgccgccgctccgcgagccggtcgtcggcgtcgaagctgctga 260
Query: 207 aggagacgtgcgcctacgtcaagagcctgcaccgggaggtggacgacctctcggagcggc 266
|||||||||||| ||| |||||||||| |||| |||||| || |||||||| || |||
Sbjct: 261 aggagacgtgcggatacatcaagagcctccaccaggaggtcgaggacctctccgacaggc 320
Query: 267 tgtcggggctcatggcgaccatggacaacgacagcccccaggccgagatcatccggagcc 326
| |||| ||| ||| ||||| ||||| | ||||||||||||||||||||||||| |||
Sbjct: 321 tctcggagctaatgtcgaccttggacgagaccagcccccaggccgagatcatccggggcc 380
Query: 327 tcctccg 333
| |||||
Sbjct: 381 ttctccg 387
>gb|BJ212167.1|BJ212167 BJ212167 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh35b21 5', mRNA sequence
Length = 549
Score = 109 bits (55), Expect = 3e-022
Identities = 185/228 (81%), Gaps = 3/228 (1%)
Strand = Plus / Plus
Query: 106 cgacgacgagatcaacgagctgatctccaagctccaggctctcctcccggaatcctcacg 165
|||||| ||| |||||||||| || |||||||||||| |||| ||||| | ||| ||
Sbjct: 245 cgacgaggaggtcaacgagctcatgtccaagctccagtctctgctccccaa---ctctcg 301
Query: 166 ccgccggaacgcgagccggtcgtcggcgtcgaagcttctgaaggagacgtgcgcctacgt 225
|||||| | | |||| | ||||| || ||||||| ||||||||||||||| |||| |
Sbjct: 302 ccgccgcggctccagccaggcgtcgacgacgaagctgctgaaggagacgtgcagctacat 361
Query: 226 caagagcctgcaccgggaggtggacgacctctcggagcggctgtcggggctcatggcgac 285
||||||||| ||||||||||||||||||||| || |||||||||| |||||| ||||
Sbjct: 362 caagagcctccaccgggaggtggacgacctcagcgaccggctgtcggacctcatgtcgac 421
Query: 286 catggacaacgacagcccccaggccgagatcatccggagcctcctccg 333
||||||| || | ||| || | || ||||||||||| || |||||||
Sbjct: 422 catggaccacaatagcgccgaagcggagatcatccgnggcatcctccg 469
>gb|BG262604.1|BG262604 WHE0938_B02_C04ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0938_B02_C04, mRNA sequence
Length = 702
Score = 107 bits (54), Expect = 1e-021
Identities = 176/216 (81%), Gaps = 3/216 (1%)
Strand = Plus / Plus
Query: 106 cgacgacgagatcaacgagctgatctccaagctccaggctctcctcccggaatcctcacg 165
|||||| ||| |||||||||| || |||||||||||| |||| ||||| | ||| ||
Sbjct: 228 cgacgaggaggtcaacgagctcatgtccaagctccagtctctgctccccaa---ctctcg 284
Query: 166 ccgccggaacgcgagccggtcgtcggcgtcgaagcttctgaaggagacgtgcgcctacgt 225
|||||| | | |||| | ||||| || ||||||| ||||||||||||||| |||| |
Sbjct: 285 ccgccgcggctccagccaggcgtcgacgacgaagctgctgaaggagacgtgcagctacat 344
Query: 226 caagagcctgcaccgggaggtggacgacctctcggagcggctgtcggggctcatggcgac 285
||||||||| ||||||||||||||||||||| || |||||||||| |||||| ||||
Sbjct: 345 caagagcctccaccgggaggtggacgacctcagcgaccggctgtcggacctcatgtcgac 404
Query: 286 catggacaacgacagcccccaggccgagatcatccg 321
||||||| || | ||| || | || |||||||||||
Sbjct: 405 catggaccacaatagcgccgaagcggagatcatccg 440
>gb|CA730249.1|CA730249 wip1c.pk003.b11 wip1c Triticum aestivum cDNA clone wip1c.pk003.b11
5' end, mRNA sequence
Length = 612
Score = 107 bits (54), Expect = 1e-021
Identities = 176/216 (81%), Gaps = 3/216 (1%)
Strand = Plus / Plus
Query: 106 cgacgacgagatcaacgagctgatctccaagctccaggctctcctcccggaatcctcacg 165
|||||| ||| |||||||||| || |||||||||||| |||| ||||| | ||| ||
Sbjct: 251 cgacgaggaggtcaacgagctcatgtccaagctccagtctctgctccccaa---ctctcg 307
Query: 166 ccgccggaacgcgagccggtcgtcggcgtcgaagcttctgaaggagacgtgcgcctacgt 225
|||||| | | |||| | ||||| || ||||||| ||||||||||||||| |||| |
Sbjct: 308 ccgccgcggctccagccaggcgtcgacgacgaagctcctgaaggagacgtgcagctacat 367
Query: 226 caagagcctgcaccgggaggtggacgacctctcggagcggctgtcggggctcatggcgac 285
||||||||| ||||||||||||||||||||| || |||||||||| |||||| ||||
Sbjct: 368 caagagcctccaccgggaggtggacgacctcagcgaccggctgtcggacctcatgtcgac 427
Query: 286 catggacaacgacagcccccaggccgagatcatccg 321
||||||| || | ||| || | || |||||||||||
Sbjct: 428 catggaccacaatagcgccgaagcggagatcatccg 463
>gb|BJ219746.1|BJ219746 BJ219746 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh35n05 3', mRNA sequence
Length = 685
Score = 87.7 bits (44), Expect = 1e-015
Identities = 107/128 (83%)
Strand = Plus / Minus
Query: 206 aaggagacgtgcgcctacgtcaagagcctgcaccgggaggtggacgacctctcggagcgg 265
|||||||||||| |||| |||||||||||||| |||| |||||||||||| || ||
Sbjct: 660 aaggagacgtgcagctacatcaagagcctgcacagggaagtggacgacctcagcgaccgc 601
Query: 266 ctgtcggggctcatggcgaccatggacaacgacagcccccaggccgagatcatccggagc 325
|| || | |||||| | |||||||||||| |||||||| |||||||||||||| |||
Sbjct: 600 ctctccgacctcatgtccaccatggacaacaacagccccgccgccgagatcatccgcagc 541
Query: 326 ctcctccg 333
||||||||
Sbjct: 540 ctcctccg 533
>gb|CA731498.1|CA731498 wip1c.pk006.f21 wip1c Triticum aestivum cDNA clone wip1c.pk006.f21
5' end, mRNA sequence
Length = 626
Score = 87.7 bits (44), Expect = 1e-015
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 206 aaggagacgtgcgcctacgtcaagagcctgcaccgggaggtggacgacctctcggagcgg 265
|||||||||||| |||| |||||||||||||| |||| |||||||||||| || ||
Sbjct: 234 aaggagacgtgcagctacatcaagagcctgcacagggaagtggacgacctcagcgaccgc 293
Query: 266 ctgtcggggctcatggcgaccatggacaacgacagcccccaggccgagatcatccggagc 325
|| || | |||||| | |||||||||||| |||||||| |||||||||||||| |||
Sbjct: 294 ctctccgacctcatgtccaccatggacaacaacagccccgccgccgagatcatccgcagc 353
Query: 326 ctcctccg 333
||||||||
Sbjct: 354 ctcctccg 361
Score = 44.1 bits (22), Expect = 0.014
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 113 gagatcaacgagctgatctccaagctccag 142
|||||||||||||| ||||||| |||||||
Sbjct: 138 gagatcaacgagctcatctccaggctccag 167
>gb|BJ212287.1|BJ212287 BJ212287 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh35n05 5', mRNA sequence
Length = 672
Score = 79.8 bits (40), Expect = 2e-013
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 210 agacgtgcgcctacgtcaagagcctgcaccgggaggtggacgacctctcggagcggctgt 269
|||||||| |||| |||||||||||||| |||| |||||||||||| || || || |
Sbjct: 31 agacgtgcagctacatcaagagcctgcacagggaagtggacgacctcagcgaccgcctct 90
Query: 270 cggggctcatggcgaccatggacaacgacagcccccaggccgagatcatccggagcctcc 329
| | |||||| | |||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 91 ccgacctcatgtccaccatggacaacaacagccccgccgccgagatcatccgcagcctcc 150
Query: 330 tccg 333
||||
Sbjct: 151 tccg 154
>gb|BJ282051.1|BJ282051 BJ282051 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr24p13 5', mRNA sequence
Length = 615
Score = 65.9 bits (33), Expect = 4e-009
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 207 aggagacgtgcgcctacgtcaagagcctgcaccgggaggtggacgacct 255
||||||||||| ||||| ||| |||| ||||||||||||||||||||||
Sbjct: 226 aggagacgtgcacctacatcaggagcttgcaccgggaggtggacgacct 274
>gb|BJ287183.1|BJ287183 BJ287183 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr24p13 3', mRNA sequence
Length = 574
Score = 65.9 bits (33), Expect = 4e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 207 aggagacgtgcgcctacgtcaagagcctgcaccgggaggtggacgacct 255
||||||||||| ||||| ||| |||| ||||||||||||||||||||||
Sbjct: 349 aggagacgtgcacctacatcaggagcttgcaccgggaggtggacgacct 301
>gb|BQ903204.1|BQ903204 Ta03_10h11_R
Ta03_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta03_10h11, mRNA
sequence
Length = 429
Score = 65.9 bits (33), Expect = 4e-009
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 275 ctcatggcgaccatggacaacgacagcccccaggccgagatcatccggagcctcctccg 333
|||||| | |||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 141 ctcatgtccaccatggacaacaacagccccsccgccgagatcatccgcagcctcctccg 83
>gb|CA632062.1|CA632062 wle1n.pk0058.d12 wle1n Triticum aestivum cDNA clone
wle1n.pk0058.d12 5' end, mRNA sequence
Length = 574
Score = 65.9 bits (33), Expect = 4e-009
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 207 aggagacgtgcgcctacgtcaagagcctgcaccgggaggtggacgacct 255
||||||||||| ||||| ||| |||| ||||||||||||||||||||||
Sbjct: 321 aggagacgtgcacctacatcaggagcttgcaccgggaggtggacgacct 369
>gb|CA638827.1|CA638827 wre1n.pk0016.d10 wre1n Triticum aestivum cDNA clone
wre1n.pk0016.d10 5' end, mRNA sequence
Length = 591
Score = 65.9 bits (33), Expect = 4e-009
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 207 aggagacgtgcgcctacgtcaagagcctgcaccgggaggtggacgacct 255
||||||||||| ||||| ||| |||| ||||||||||||||||||||||
Sbjct: 202 aggagacgtgcacctacatcaggagcttgcaccgggaggtggacgacct 250
>gb|BF485412.1|BF485412 WHE2311_D02_H03ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2311_D02_H03, mRNA sequence
Length = 519
Score = 61.9 bits (31), Expect = 6e-008
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 87 gccgacgtggcaggatcagcgacgacgagatcaacgagctgatctccaagctccaggctc 146
|||| |||||| ||||| |||||| ||||||||||||||||| |||||||||||| |
Sbjct: 164 gccgccgtggcttgatcaccgacgaggagatcaacgagctgatgggcaagctccaggcgc 223
Query: 147 tcctcccggaatcctcacgccgc 169
| |||||||||| || ||||||
Sbjct: 224 tggtcccggaatcatcccgccgc 246
Score = 54.0 bits (27), Expect = 1e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 184 gtcgtcggcgtcgaagcttctgaaggagacgtgcgcctacgtcaagagcct 234
|||||| ||||| ||||| |||||||||||||||| ||| ||||||||||
Sbjct: 469 gtcgtccgcgtctaagctgctgaaggagacgtgcggatacatcaagagcct 519
>gb|BE406008.1|BE406008 WHE0404_c03_c03zB Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0404_c03_c03, mRNA
sequence
Length = 328
Score = 48.1 bits (24), Expect = 9e-004
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 106 cgacgacgagatcaacgagctgatctccaagctccaggctctcctccc 153
|||||| ||| |||||||||| || |||||||||||| |||| |||||
Sbjct: 244 cgacgaggaggtcaacgagctcatgtccaagctccagtctctgctccc 291
>gb|CA629477.1|CA629477 wle1n.pk0022.e12 wle1n Triticum aestivum cDNA clone
wle1n.pk0022.e12 5' end, mRNA sequence
Length = 514
Score = 48.1 bits (24), Expect = 9e-004
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 106 cgacgacgagatcaacgagctgatctccaagctccaggctctcctccc 153
|||||| ||| |||||||||| || |||||||||||| |||| |||||
Sbjct: 249 cgacgaggaggtcaacgagctcatgtccaagctccagtctctgctccc 296
>gb|CD890767.1|CD890767 G118.115G08F010718 G118 Triticum aestivum cDNA clone G118115G08,
mRNA sequence
Length = 617
Score = 48.1 bits (24), Expect = 9e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 176 gcgagccggtcgtcggcgtcgaagcttctgaa 207
|||||||||||||||||| ||| |||||||||
Sbjct: 574 gcgagccggtcgtcggcgccgaggcttctgaa 543
>gb|CD894267.1|CD894267 G118.125N11F010829 G118 Triticum aestivum cDNA clone G118125N11,
mRNA sequence
Length = 721
Score = 48.1 bits (24), Expect = 9e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 176 gcgagccggtcgtcggcgtcgaagcttctgaa 207
|||||||||||||||||| ||| |||||||||
Sbjct: 91 gcgagccggtcgtcggcgccgaggcttctgaa 60
>gb|CD897751.1|CD897751 G174.106P23F010823 G174 Triticum aestivum cDNA clone G174106P23,
mRNA sequence
Length = 495
Score = 48.1 bits (24), Expect = 9e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 176 gcgagccggtcgtcggcgtcgaagcttctgaa 207
|||||||||||||||||| ||| |||||||||
Sbjct: 378 gcgagccggtcgtcggcgccgaggcttctgaa 409
>gb|CD931742.1|CD931742 GR45.115G14F010420 GR45 Triticum aestivum cDNA clone GR45115G14,
mRNA sequence
Length = 676
Score = 48.1 bits (24), Expect = 9e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 176 gcgagccggtcgtcggcgtcgaagcttctgaa 207
|||||||||||||||||| ||| |||||||||
Sbjct: 64 gcgagccggtcgtcggcgccgaggcttctgaa 33
>gb|CN012664.1|CN012664 WHE3951_D07_G13ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3951_D07_G13,
mRNA sequence
Length = 708
Score = 44.1 bits (22), Expect = 0.014
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 207 aggagacgtgcgcctacgtcaagagcctgcaccgggaggtgg 248
||||||||||| |||| || ||||||||||||||||||||
Sbjct: 76 aggagacgtgcaactacatccggagcctgcaccgggaggtgg 117
>gb|BE430737.1|BE430737 SUN007.G05F991221 ITEC SUN Wheat cDNA Library Triticum aestivum
cDNA clone SUN007.G05, mRNA sequence
Length = 599
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 176 gcgagccggtcgtcggcgtcgaagcttc 203
|||||||||||||||||| ||| |||||
Sbjct: 309 gcgagccggtcgtcggcgccgaggcttc 282
>gb|BF201483.1|BF201483 WHE1771_B05_C09ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1771_B05_C09, mRNA sequence
Length = 370
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 176 gcgagccggtcgtcggcgtcgaagcttc 203
|||||||||||||||||| ||| |||||
Sbjct: 31 gcgagccggtcgtcggcgccgaggcttc 4
>gb|BM137237.1|BM137237 WHE2631_C06_F11ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2631_C06_F11,
mRNA sequence
Length = 280
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 176 gcgagccggtcgtcggcgtcgaagcttc 203
|||||||||||||||||| ||| |||||
Sbjct: 201 gcgagccggtcgtcggcgccgaggcttc 174
>gb|CA716581.1|CA716581 wdk3c.pk026.b6 wdk3c Triticum aestivum cDNA clone wdk3c.pk026.b6 5'
end, mRNA sequence
Length = 397
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 176 gcgagccggtcgtcggcgtcgaagcttc 203
|||||||||||||||||| ||| |||||
Sbjct: 306 gcgagccggtcgtcggcgccgaggcttc 279
>gb|CD893118.1|CD893118 G118.122O05F010725 G118 Triticum aestivum cDNA clone G118122O05,
mRNA sequence
Length = 524
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 176 gcgagccggtcgtcggcgtcgaagcttc 203
|||||||||||||||||| ||| |||||
Sbjct: 332 gcgagccggtcgtcggcgccgaggcttc 305
>gb|CD896218.1|CD896218 G174.102C08R011120 G174 Triticum aestivum cDNA clone G174102C08,
mRNA sequence
Length = 667
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 176 gcgagccggtcgtcggcgtcgaagcttc 203
|||||||||||||||||| ||| |||||
Sbjct: 617 gcgagccggtcgtcggcgccgaggcttc 644
>gb|CD928594.1|CD928594 GR45.105F09F010319 GR45 Triticum aestivum cDNA clone GR45105F09,
mRNA sequence
Length = 197
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 176 gcgagccggtcgtcggcgtcgaagcttc 203
|||||||||||||||||| ||| |||||
Sbjct: 25 gcgagccggtcgtcggcgccgaggcttc 52
>gb|CK171445.1|CK171445 FGAS046704 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 1105
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 393 ggccgccctcttctgctgcctgcc 416
||||||||||||||||| ||||||
Sbjct: 800 ggccgccctcttctgcttcctgcc 777
>gb|CK208291.1|CK208291 FGAS019992 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1164
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 218 gcctacgtcaagagcctgca 237
||||||||||||||||||||
Sbjct: 515 gcctacgtcaagagcctgca 496
>gb|AJ610372.1|AJ610372 AJ610372 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 01982R, mRNA
sequence
Length = 483
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 176 gcgagccggtcgtcggcgtcgaagcttc 203
|||||||||||||||||| ||| |||||
Sbjct: 136 gcgagccggtcgtcggcgccgaggcttc 109
>gb|CN010979.1|CN010979 WHE3878_D12_H24ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3878_D12_H24,
mRNA sequence
Length = 418
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 176 gcgagccggtcgtcggcgtcgaagcttc 203
|||||||||||||||||| ||| |||||
Sbjct: 226 gcgagccggtcgtcggcgccgaggcttc 199
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 213,001
Number of Sequences: 636343
Number of extensions: 213001
Number of successful extensions: 59626
Number of sequences better than 0.5: 31
Number of HSP's better than 0.5 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59579
Number of HSP's gapped (non-prelim): 47
length of query: 744
length of database: 367,240,239
effective HSP length: 19
effective length of query: 725
effective length of database: 355,149,722
effective search space: 257483548450
effective search space used: 257483548450
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)