BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3848982.2.1
(697 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ236789.1|BJ236789 BJ236789 Y. Ogihara unpublished cDNA... 167 1e-039
gb|BQ806609.1|BQ806609 WHE3581_A09_B17ZS Wheat developing g... 167 1e-039
gb|CD893554.1|CD893554 G118.123P05R011115 G118 Triticum aes... 167 1e-039
gb|CD893799.1|CD893799 G118.124J02F010828 G118 Triticum aes... 167 1e-039
gb|CD905001.1|CD905001 G468.100D20F010614 G468 Triticum aes... 167 1e-039
gb|CD907763.1|CD907763 G468.107P11F010813 G468 Triticum aes... 167 1e-039
gb|BJ235109.1|BJ235109 BJ235109 Y. Ogihara unpublished cDNA... 155 5e-036
gb|BJ237654.1|BJ237654 BJ237654 Y. Ogihara unpublished cDNA... 149 3e-034
gb|BJ299385.1|BJ299385 BJ299385 Y. Ogihara unpublished cDNA... 143 2e-032
gb|BJ240324.1|BJ240324 BJ240324 Y. Ogihara unpublished cDNA... 139 3e-031
gb|CD897609.1|CD897609 G174.106I03F010823 G174 Triticum aes... 123 2e-026
gb|BE422773.1|BE422773 WHE0058_A04_B08ZS Wheat endosperm cD... 117 1e-024
gb|CD903893.1|CD903893 G356.111M15F010919 G356 Triticum aes... 115 4e-024
gb|CD897610.1|CD897610 G174.106I03R011120 G174 Triticum aes... 109 3e-022
gb|BF428858.1|BF428858 WHE1710_C02_E04ZS Wheat heat stresse... 107 1e-021
gb|CD900158.1|CD900158 G174.114K12F010824 G174 Triticum aes... 107 1e-021
gb|CD900159.1|CD900159 G174.114K12R011120 G174 Triticum aes... 107 1e-021
gb|BJ299585.1|BJ299585 BJ299585 Y. Ogihara unpublished cDNA... 101 6e-020
gb|BQ167140.1|BQ167140 WHE0058_A04_B08ZK Cheyenne wheat end... 101 6e-020
gb|CD903894.1|CD903894 G356.111M15R011024 G356 Triticum aes... 101 6e-020
gb|BE498763.1|BE498763 WHE0965_B09_D17ZS Wheat pre-anthesis... 98 1e-018
gb|CD933822.1|CD933822 GR45.122B21F010721 GR45 Triticum aes... 98 1e-018
gb|BJ240582.1|BJ240582 BJ240582 Y. Ogihara unpublished cDNA... 94 2e-017
gb|BJ242327.1|BJ242327 BJ242327 Y. Ogihara unpublished cDNA... 94 2e-017
gb|CD893800.1|CD893800 G118.124J02R011116 G118 Triticum aes... 94 2e-017
gb|CD914851.1|CD914851 G550.124E07F010712 G550 Triticum aes... 94 2e-017
gb|CV066380.1|CV066380 WNEL3b8 Wheat EST endosperm library ... 82 6e-014
gb|BJ246126.1|BJ246126 BJ246126 Y. Ogihara unpublished cDNA... 80 2e-013
gb|BJ222680.1|BJ222680 BJ222680 Y. Ogihara unpublished cDNA... 74 1e-011
gb|BJ247259.1|BJ247259 BJ247259 Y. Ogihara unpublished cDNA... 74 1e-011
gb|BQ245149.1|BQ245149 TaE15030A03R TaE15 Triticum aestivum... 74 1e-011
gb|CA725021.1|CA725021 wds3f.pk003.m6 wds3f Triticum aestiv... 74 1e-011
gb|CK167447.1|CK167447 FGAS051809 Triticum aestivum FGAS: T... 74 1e-011
gb|CK168342.1|CK168342 FGAS052869 Triticum aestivum FGAS: T... 74 1e-011
gb|AY589581.1| Triticum aestivum beta-expansin TaEXPB4 mRNA... 74 1e-011
gb|BQ169719.1|BQ169719 WHE0965_B09_D17ZT Wheat pre-anthesis... 72 6e-011
gb|BQ236169.1|BQ236169 TaE05037C12F TaE05 Triticum aestivum... 70 2e-010
gb|CA606615.1|CA606615 wr1.pk0070.b10 wr1 Triticum aestivum... 70 2e-010
gb|BJ292999.1|BJ292999 BJ292999 Y. Ogihara unpublished cDNA... 66 3e-009
gb|CD885826.1|CD885826 G118.100J07F010507 G118 Triticum aes... 66 3e-009
gb|CK166717.1|CK166717 FGAS050915 Triticum aestivum FGAS: T... 66 3e-009
gb|AJ614162.1|AJ614162 AJ614162 Triticum turgidum subsp. du... 66 3e-009
gb|CV780550.1|CV780550 FGAS074961 Triticum aestivum FGAS: L... 66 3e-009
gb|BE493526.1|BE493526 WHE0579_B12_B12ZE Triticum monococcu... 64 1e-008
gb|BE499408.1|BE499408 WHE0974_G07_N14ZS Wheat pre-anthesis... 58 8e-007
gb|BQ239090.1|BQ239090 TaE05037C12R TaE05 Triticum aestivum... 58 8e-007
gb|BQ807160.1|BQ807160 WHE3587_E04_I07ZS Wheat developing g... 58 8e-007
gb|BQ807275.1|BQ807275 WHE3588_H04_O08ZS Wheat developing g... 58 8e-007
gb|BJ224620.1|BJ224620 BJ224620 Y. Ogihara unpublished cDNA... 58 8e-007
gb|BJ234533.1|BJ234533 BJ234533 Y. Ogihara unpublished cDNA... 58 8e-007
gb|BJ270775.1|BJ270775 BJ270775 Y. Ogihara unpublished cDNA... 58 8e-007
gb|BJ288382.1|BJ288382 BJ288382 Y. Ogihara unpublished cDNA... 58 8e-007
gb|BJ289022.1|BJ289022 BJ289022 Y. Ogihara unpublished cDNA... 58 8e-007
gb|BJ316076.1|BJ316076 BJ316076 Y. Ogihara unpublished cDNA... 58 8e-007
gb|CA713519.1|CA713519 wdk3c.pk019.a15 wdk3c Triticum aesti... 58 8e-007
gb|CD891593.1|CD891593 G118.117N01F010724 G118 Triticum aes... 58 8e-007
gb|CD915164.1|CD915164 G550.125E21F010713 G550 Triticum aes... 58 8e-007
gb|CD920343.1|CD920343 G608.116L23F010912 G608 Triticum aes... 58 8e-007
gb|CD930909.1|CD930909 GR45.112N09F010418 GR45 Triticum aes... 58 8e-007
gb|CD931237.1|CD931237 GR45.113N21F010419 GR45 Triticum aes... 58 8e-007
gb|CK206588.1|CK206588 FGAS018187 Triticum aestivum FGAS: L... 58 8e-007
gb|AJ611557.1|AJ611557 AJ611557 Triticum turgidum subsp. du... 58 8e-007
gb|CD930868.1|CD930868 GR45.112K21F010511 GR45 Triticum aes... 54 1e-005
gb|BJ217471.1|BJ217471 BJ217471 Y. Ogihara unpublished cDNA... 52 5e-005
gb|BE404627.1|BE404627 WHE0445_E03_I05ZS Wheat etiolated se... 50 2e-004
gb|BJ208652.1|BJ208652 BJ208652 Y. Ogihara unpublished cDNA... 50 2e-004
gb|BJ315203.1|BJ315203 BJ315203 Y. Ogihara unpublished cDNA... 50 2e-004
gb|CA707463.1|CA707463 wdk2c.pk006.i12 wdk2c Triticum aesti... 50 2e-004
gb|CD903937.1|CD903937 G356.111O21F010919 G356 Triticum aes... 50 2e-004
gb|CD913065.1|CD913065 G550.116L22F010525 G550 Triticum aes... 50 2e-004
gb|AJ602412.1|AJ602412 AJ602412 T05 Triticum aestivum cDNA ... 50 2e-004
gb|CV776993.1|CV776993 FGAS071397 Triticum aestivum FGAS: L... 50 2e-004
gb|AY589579.1| Triticum aestivum beta-expansin TaEXPB2 mRNA... 50 2e-004
gb|BE442908.1|BE442908 WHE1108_A05_B10ZS Wheat etiolated se... 48 8e-004
gb|BJ287436.1|BJ287436 BJ287436 Y. Ogihara unpublished cDNA... 48 8e-004
gb|BQ838005.1|BQ838005 WHE2905_E01_I01ZS Wheat aluminum-str... 48 8e-004
gb|CA603882.1|CA603882 wr1.pk0035.g12 wr1 Triticum aestivum... 48 8e-004
gb|CD452508.1|CD452508 WHE1108_A05_B10ZT CS wheat etiolated... 48 8e-004
gb|CK152852.1|CK152852 FGAS035928 Triticum aestivum FGAS: T... 48 8e-004
gb|CK215734.1|CK215734 FGAS027704 Triticum aestivum FGAS: L... 48 8e-004
gb|AY543543.1| Triticum aestivum expansin EXPB9 mRNA, compl... 48 8e-004
gb|BE403825.1|BE403825 WHE0420_B05_D10ZS Wheat etiolated se... 46 0.003
gb|CA600236.1|CA600236 waw1c.pk006.l17 waw1c Triticum aesti... 46 0.003
gb|CK201768.1|CK201768 FGAS010288 Triticum aestivum FGAS: L... 46 0.003
gb|DR738434.1|DR738434 FGAS083651 Triticum aestivum FGAS: L... 46 0.003
dbj|AB158404.1| Triticum aestivum expB mRNA for putative be... 46 0.003
gb|BJ293102.1|BJ293102 BJ293102 Y. Ogihara unpublished cDNA... 44 0.013
gb|CD877922.1|CD877922 AZO4.101H13F011002 AZO4 Triticum aes... 44 0.013
gb|BH759025.1|BH759025 070 38 Sp6 Not1 Targeted Wheat BAC L... 42 0.050
gb|BM138055.1|BM138055 WHE0481_H02_P03ZS Wheat Fusarium gra... 42 0.050
gb|CA640227.1|CA640227 wre1n.pk0033.d1 wre1n Triticum aesti... 42 0.050
gb|CD922607.1|CD922607 G750.104A04F010529 G750 Triticum aes... 42 0.050
gb|CB307251.1|CB307251 HFIG236 Hessian fly infested cDNA li... 42 0.050
gb|AJ717141.1|AJ717141 AJ717141 Triticum turgidum subsp. du... 42 0.050
gb|BJ272409.1|BJ272409 BJ272409 Y. Ogihara unpublished cDNA... 40 0.20
gb|BQ743467.1|BQ743467 WHE4104_C11_F22ZS Wheat salt-stresse... 40 0.20
gb|CA631737.1|CA631737 wle1n.pk0047.h5 wle1n Triticum aesti... 40 0.20
gb|CK164166.1|CK164166 FGAS048064 Triticum aestivum FGAS: T... 40 0.20
gb|CK165047.1|CK165047 FGAS048984 Triticum aestivum FGAS: T... 40 0.20
gb|CK165153.1|CK165153 FGAS049094 Triticum aestivum FGAS: T... 40 0.20
gb|CK166678.1|CK166678 FGAS050860 Triticum aestivum FGAS: T... 40 0.20
gb|CK167075.1|CK167075 FGAS051354 Triticum aestivum FGAS: T... 40 0.20
gb|CK167208.1|CK167208 FGAS051513 Triticum aestivum FGAS: T... 40 0.20
gb|CK207985.1|CK207985 FGAS019660 Triticum aestivum FGAS: L... 40 0.20
gb|CK211529.1|CK211529 FGAS023376 Triticum aestivum FGAS: L... 40 0.20
gb|CV767558.1|CV767558 FGAS061948 Triticum aestivum FGAS: L... 40 0.20
gb|DR738516.1|DR738516 FGAS083733 Triticum aestivum FGAS: L... 40 0.20
>gb|BJ236789.1|BJ236789 BJ236789 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe23c04 5', mRNA sequence
Length = 659
Score = 167 bits (84), Expect = 1e-039
Identities = 189/224 (84%)
Strand = Plus / Plus
Query: 34 gccaggtggagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagc 93
|||||| ||||||||| ||||| ||||||||||||||||||||||| | |||||||||||
Sbjct: 156 gccaggaggagcccgtccacttcgacctgagcgggacggcgttcggcggcatggcgaagc 215
Query: 94 ccggccaggccgaccagctccggaacgccggccgcctgcaagtccagtacattcgggtgg 153
|||||||||||||||||||||| ||||| || || ||| ||||||||| |||||
Sbjct: 216 ccggccaggccgaccagctccgcgcggccggacgtctccaaatccagtacacacgggtcc 275
Query: 154 cgtgcaactggaacggcttggacatcgccttcagggtggacgccggctcaaacgccaact 213
|||||| |||| || ||||||| ||||||| ||||||||||||||| ||| || |||
Sbjct: 276 cgtgcagctggccggggatggacatagccttcaaggtggacgccggctccaactcctact 335
Query: 214 acctggccatggccatcgagtacgagtccggggacggggacctg 257
|||| |||||| ||||||||||||| ||| ||||| ||||||
Sbjct: 336 acctcgccatgctcatcgagtacgaggacggcgacggcgacctg 379
Score = 93.7 bits (47), Expect = 2e-017
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 354 ctgcaggcccccctgtctgtccgcctcacctcgggctccggcagggtcctcgtcgccagc 413
|||||||| ||| | || |||||||||||||| ||||||||| | |||||| || ||
Sbjct: 479 ctgcaggcgcccttctcggtccgcctcacctccagctccggcaagcccctcgtggcgagt 538
Query: 414 aacgtcatccccgccggatggcagcccggcagaacctaccgctccgtcgtcaact 468
|||||||||||| |||| ||| |||||||| | ||||||||||||||||||||||
Sbjct: 539 aacgtcatccccaccggctggaagcccggcggcacctaccgctccgtcgtcaact 593
>gb|BQ806609.1|BQ806609 WHE3581_A09_B17ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3581_A09_B17, mRNA sequence
Length = 733
Score = 167 bits (84), Expect = 1e-039
Identities = 189/224 (84%)
Strand = Plus / Plus
Query: 34 gccaggtggagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagc 93
|||||| ||||||||| ||||| ||||||||||||||||||||||| | |||||||||||
Sbjct: 61 gccaggaggagcccgtccacttcgacctgagcgggacggcgttcggcggcatggcgaagc 120
Query: 94 ccggccaggccgaccagctccggaacgccggccgcctgcaagtccagtacattcgggtgg 153
|||||||||||||||||||||| ||||| || || ||| ||||||||| |||||
Sbjct: 121 ccggccaggccgaccagctccgcgcggccggacgtctccaaatccagtacacacgggtcc 180
Query: 154 cgtgcaactggaacggcttggacatcgccttcagggtggacgccggctcaaacgccaact 213
|||||| |||| || ||||||| ||||||| ||||||||||||||| ||| || |||
Sbjct: 181 cgtgcagctggccggggatggacatagccttcaaggtggacgccggctccaactcctact 240
Query: 214 acctggccatggccatcgagtacgagtccggggacggggacctg 257
|||| |||||| ||||||||||||| ||| ||||| ||||||
Sbjct: 241 acctcgccatgctcatcgagtacgaggacggcgacggcgacctg 284
Score = 93.7 bits (47), Expect = 2e-017
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 354 ctgcaggcccccctgtctgtccgcctcacctcgggctccggcagggtcctcgtcgccagc 413
|||||||| ||| | || |||||||||||||| ||||||||| | |||||| || ||
Sbjct: 384 ctgcaggcgcccttctcggtccgcctcacctccagctccggcaagcccctcgtggcgagt 443
Query: 414 aacgtcatccccgccggatggcagcccggcagaacctaccgctccgtcgtcaact 468
|||||||||||| |||| ||| |||||||| | ||||||||||||||||||||||
Sbjct: 444 aacgtcatccccaccggctggaagcccggcggcacctaccgctccgtcgtcaact 498
>gb|CD893554.1|CD893554 G118.123P05R011115 G118 Triticum aestivum cDNA clone G118123P05,
mRNA sequence
Length = 725
Score = 167 bits (84), Expect = 1e-039
Identities = 183/216 (84%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
|||||||| ||||| ||||| ||||||||||||||||| | |||||||||||||||||||
Sbjct: 441 gagcccgtccacttcgacctcagcgggacggcgttcggcggcatggcgaagcccggccag 500
Query: 102 gccgaccagctccggaacgccggccgcctgcaagtccagtacattcgggtggcgtgcaac 161
|||||||||||||| |||||| || || ||| ||||||||| ||||| ||||||||
Sbjct: 501 gccgaccagctccgcgccgccggacgtctccaaatccagtacacacgggtcccgtgcaac 560
Query: 162 tggaacggcttggacatcgccttcagggtggacgccggctcaaacgccaactacctggcc 221
||| || ||||||| ||||||| ||||||||||||||| ||| || ||||||| |||
Sbjct: 561 tggccggggatggacatagccttcaaggtggacgccggctccaactcctactacctcgcc 620
Query: 222 atggccatcgagtacgagtccggggacggggacctg 257
||| ||||||||||||| ||| ||||| ||||||
Sbjct: 621 atgctcatcgagtacgaggacggcgacggcgacctg 656
>gb|CD893799.1|CD893799 G118.124J02F010828 G118 Triticum aestivum cDNA clone G118124J02,
mRNA sequence
Length = 792
Score = 167 bits (84), Expect = 1e-039
Identities = 189/224 (84%)
Strand = Plus / Plus
Query: 34 gccaggtggagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagc 93
|||||| ||||||||| ||||| ||||||||||||||||||||||| | |||||||||||
Sbjct: 431 gccaggaggagcccgtccacttcgacctgagcgggacggcgttcggcggcatggcgaagc 490
Query: 94 ccggccaggccgaccagctccggaacgccggccgcctgcaagtccagtacattcgggtgg 153
|||||||||||||||||||||| ||||| || || ||| ||||||||| |||||
Sbjct: 491 ccggccaggccgaccagctccgcgcggccggacgtctccaaatccagtacacacgggtcc 550
Query: 154 cgtgcaactggaacggcttggacatcgccttcagggtggacgccggctcaaacgccaact 213
|||||| |||| || ||||||| ||||||| ||||||||||||||| ||| || |||
Sbjct: 551 cgtgcagctggccggggatggacatagccttcaaggtggacgccggctccaactcctact 610
Query: 214 acctggccatggccatcgagtacgagtccggggacggggacctg 257
|||| |||||| ||||||||||||| ||| ||||| ||||||
Sbjct: 611 acctcgccatgctcatcgagtacgaggacggcgacggcgacctg 654
>gb|CD905001.1|CD905001 G468.100D20F010614 G468 Triticum aestivum cDNA clone G468100D20,
mRNA sequence
Length = 671
Score = 167 bits (84), Expect = 1e-039
Identities = 183/216 (84%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
|||||||| ||||| ||||| ||||||||||||||||| | |||||||||||||||||||
Sbjct: 312 gagcccgtccacttcgacctcagcgggacggcgttcggcggcatggcgaagcccggccag 371
Query: 102 gccgaccagctccggaacgccggccgcctgcaagtccagtacattcgggtggcgtgcaac 161
|||||||||||||| |||||| || || ||| ||||||||| ||||| ||||||||
Sbjct: 372 gccgaccagctccgcgccgccggacgtctccaaatccagtacacacgggtcccgtgcaac 431
Query: 162 tggaacggcttggacatcgccttcagggtggacgccggctcaaacgccaactacctggcc 221
||| || ||||||| ||||||| ||||||||||||||| ||| || ||||||| |||
Sbjct: 432 tggccggggatggacatagccttcaaggtggacgccggctccaactcctactacctcgcc 491
Query: 222 atggccatcgagtacgagtccggggacggggacctg 257
||| ||||||||||||| ||| ||||| ||||||
Sbjct: 492 atgctcatcgagtacgaggacggcgacggcgacctg 527
>gb|CD907763.1|CD907763 G468.107P11F010813 G468 Triticum aestivum cDNA clone G468107P11,
mRNA sequence
Length = 680
Score = 167 bits (84), Expect = 1e-039
Identities = 183/216 (84%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
|||||||| ||||| ||||| ||||||||||||||||| | |||||||||||||||||||
Sbjct: 433 gagcccgtccacttcgacctcagcgggacggcgttcggcggcatggcgaagcccggccag 492
Query: 102 gccgaccagctccggaacgccggccgcctgcaagtccagtacattcgggtggcgtgcaac 161
|||||||||||||| |||||| || || ||| ||||||||| ||||| ||||||||
Sbjct: 493 gccgaccagctccgcgccgccggacgtctccaaatccagtacacacgggtcccgtgcaac 552
Query: 162 tggaacggcttggacatcgccttcagggtggacgccggctcaaacgccaactacctggcc 221
||| || ||||||| ||||||| ||||||||||||||| ||| || ||||||| |||
Sbjct: 553 tggccggggatggacatagccttcaaggtggacgccggctccaactcctactacctcgcc 612
Query: 222 atggccatcgagtacgagtccggggacggggacctg 257
||| ||||||||||||| ||| ||||| ||||||
Sbjct: 613 atgctcatcgagtacgaggacggagacggcgacctg 648
>gb|BJ235109.1|BJ235109 BJ235109 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe15e02 5', mRNA sequence
Length = 655
Score = 155 bits (78), Expect = 5e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 34 gccaggtggagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagc 93
|||||| ||||||||| ||||| ||||||||||||||||||||||| | |||||||||||
Sbjct: 411 gccaggaggagcccgtccacttcgacctgagcgggacggcgttcggcggcatggcgaagc 470
Query: 94 ccggccaggccgaccagctccggaacgccggccgcctgcaagtccagtacattcgggtgg 153
|||||||||||||||||||||| ||||| || || ||| |||| |||| |||||
Sbjct: 471 ccggccaggccgaccagctccgcgcggccggacgtctccaaatccattacacacgggtcc 530
Query: 154 cgtgcaactggaacggcttggacatcgccttcagggtggacgccggctcaaacgccaact 213
|||||| |||| || ||||||| ||||||| ||||||||||||||| ||| || |||
Sbjct: 531 cgtgcagctggccggggatggacatagccttcaaggtggacgccggctccaactcctact 590
Query: 214 acctggccatggccatcgagtacgag 239
|||| |||||| |||||||||||||
Sbjct: 591 acctcgccatgctcatcgagtacgag 616
>gb|BJ237654.1|BJ237654 BJ237654 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe10k17 3', mRNA sequence
Length = 714
Score = 149 bits (75), Expect = 3e-034
Identities = 175/207 (84%), Gaps = 1/207 (0%)
Strand = Plus / Minus
Query: 34 gccaggtggagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagc 93
|||||| ||||||||| ||||| ||||||||||||||||||||||| | |||||||||||
Sbjct: 666 gccaggaggagcccgtccacttcgacctgagcgggacggcgttcggcggcatggcgaagc 607
Query: 94 ccggccaggccgaccagctccggaacgccggccgcctgcaagtccagtacattcgggtgg 153
|||||||||||||||||||||| ||||| || || ||| ||||||||| |||||
Sbjct: 606 ccggccaggccgaccagctccgcgcggccggacgtctccaaatccagtacacacgggtcc 547
Query: 154 cgtgcaactggaacggcttggacatcgccttcagggtggacgcc-ggctcaaacgccaac 212
|||||| |||| || ||||||| ||||||| |||||||||| ||||| ||| || ||
Sbjct: 546 cgtgcagctggccggggatggacatagccttcaaggtggacgccgggctccaactcctac 487
Query: 213 tacctggccatggccatcgagtacgag 239
||||| |||||| |||||||||||||
Sbjct: 486 tacctcgccatgctcatcgagtacgag 460
Score = 93.7 bits (47), Expect = 2e-017
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 354 ctgcaggcccccctgtctgtccgcctcacctcgggctccggcagggtcctcgtcgccagc 413
|||||||| ||| | || |||||||||||||| ||||||||| | |||||| || ||
Sbjct: 342 ctgcaggcgcccttctcggtccgcctcacctccagctccggcaagcccctcgtggcgagt 283
Query: 414 aacgtcatccccgccggatggcagcccggcagaacctaccgctccgtcgtcaact 468
|||||||||||| |||| ||| |||||||| | ||||||||||||||||||||||
Sbjct: 282 aacgtcatccccaccggctggaagcccggcggcacctaccgctccgtcgtcaact 228
>gb|BJ299385.1|BJ299385 BJ299385 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl30b20 3', mRNA sequence
Length = 643
Score = 143 bits (72), Expect = 2e-032
Identities = 186/224 (83%)
Strand = Plus / Minus
Query: 34 gccaggtggagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagc 93
|||||| |||||| || ||||| ||| ||||||||||||||||||| | |||||||||||
Sbjct: 612 gccaggaggagcctgtccacttcgacatgagcgggacggcgttcggcggcatggcgaagc 553
Query: 94 ccggccaggccgaccagctccggaacgccggccgcctgcaagtccagtacattcgggtgg 153
|||||||||||||||| ||||| ||||| || || ||| ||||||||| |||||
Sbjct: 552 ccggccaggccgaccaactccgcgcggccggacgtctccaaatccagtacacacgggtcc 493
Query: 154 cgtgcaactggaacggcttggacatcgccttcagggtggacgccggctcaaacgccaact 213
||||||||||| || ||||||| ||||||| ||| ||||||||||| ||| || |||
Sbjct: 492 cgtgcaactggccggggatggacatagccttcaaggtagacgccggctccaactcctact 433
Query: 214 acctggccatggccatcgagtacgagtccggggacggggacctg 257
|||| |||||| ||||||||||||| ||| ||||| ||||||
Sbjct: 432 acctcgccatgctcatcgagtacgaggacggcgacggcgacctg 389
Score = 101 bits (51), Expect = 6e-020
Identities = 99/115 (86%)
Strand = Plus / Minus
Query: 354 ctgcaggcccccctgtctgtccgcctcacctcgggctccggcagggtcctcgtcgccagc 413
|||||||| ||| | || |||||||||||||| ||||||||| | |||||| || |||
Sbjct: 289 ctgcaggcgcccttctcggtccgcctcacctccagctccggcaagaccctcgtggcgagc 230
Query: 414 aacgtcatccccgccggatggcagcccggcagaacctaccgctccgtcgtcaact 468
||||||||||||||||| ||| |||| ||| | ||||||||||||||||||||||
Sbjct: 229 aacgtcatccccgccggctggaagcctggcggcacctaccgctccgtcgtcaact 175
>gb|BJ240324.1|BJ240324 BJ240324 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe15e02 3', mRNA sequence
Length = 631
Score = 139 bits (70), Expect = 3e-031
Identities = 159/189 (84%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccag 110
||||| ||| ||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 631 cacttcgacntgagcgggacggcgttcggcggcatggcgaagcccggccaggccgaccag 572
Query: 111 ctccggaacgccggccgcctgcaagtccagtacattcgggtggcgtgcaactggaacggc 170
||||| ||||| || || ||| ||||||||| ||||| |||||| |||| ||
Sbjct: 571 ctccgcgcggccggacgtctccaaatccagtacacacgggtcccgtgcagctggccgggg 512
Query: 171 ttggacatcgccttcagggtggacgccggctcaaacgccaactacctggccatggccatc 230
||||||| ||||||| ||||||||||||||| ||| || ||||||| |||||| ||||
Sbjct: 511 atggacatagccttcaaggtggacgccggctccaactcctactacctcgccatgctcatc 452
Query: 231 gagtacgag 239
|||||||||
Sbjct: 451 gagtacgag 443
Score = 93.7 bits (47), Expect = 2e-017
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 354 ctgcaggcccccctgtctgtccgcctcacctcgggctccggcagggtcctcgtcgccagc 413
|||||||| ||| | || |||||||||||||| ||||||||| | |||||| || ||
Sbjct: 325 ctgcaggcgcccttctcggtccgcctcacctccagctccggcaagcccctcgtggcgagt 266
Query: 414 aacgtcatccccgccggatggcagcccggcagaacctaccgctccgtcgtcaact 468
|||||||||||| |||| ||| |||||||| | ||||||||||||||||||||||
Sbjct: 265 aacgtcatccccaccggctggaagcccggcggcacctaccgctccgtcgtcaact 211
>gb|CD897609.1|CD897609 G174.106I03F010823 G174 Triticum aestivum cDNA clone G174106I03,
mRNA sequence
Length = 592
Score = 123 bits (62), Expect = 2e-026
Identities = 77/82 (93%)
Strand = Plus / Plus
Query: 34 gccaggtggagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagc 93
|||||| ||||||||| ||||| ||||||||||||||||||||||| | |||||||||||
Sbjct: 428 gccaggaggagcccgtccacttcgacctgagcgggacggcgttcggcggcatggcgaagc 487
Query: 94 ccggccaggccgaccagctccg 115
||||||||||||||||||||||
Sbjct: 488 ccggccaggccgaccagctccg 509
>gb|BE422773.1|BE422773 WHE0058_A04_B08ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0058_A04_B08, mRNA sequence
Length = 606
Score = 117 bits (59), Expect = 1e-024
Identities = 168/203 (82%), Gaps = 1/203 (0%)
Strand = Plus / Plus
Query: 34 gccaggtggagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagc 93
|||||| |||||| || ||||| ||| ||||||||||||||||||| | |||||||||||
Sbjct: 404 gccaggaggagcctgtccacttcgacatgagcgggacggcgttcggcggcatggcgaagc 463
Query: 94 ccggccaggccgaccagctccggaacgccggccgcctgcaagtccagtacattcgggtgg 153
|||||||||||||||| ||||| ||||| || || ||| ||||||||| |||||
Sbjct: 464 ccggccaggccgaccaactccgcgcggccggacgtctccaaatccagtacacacgggtcc 523
Query: 154 cgtgcaactgg-aacggcttggacatcgccttcagggtggacgccggctcaaacgccaac 212
||||||||||| || ||||||| ||||||| ||| ||||||||||| ||| || ||
Sbjct: 524 cgtgcaactggccgggggatggacatagccttcaaggtagacgccggctccaactcctac 583
Query: 213 tacctggccatggccatcgagta 235
||||| |||||| |||||||||
Sbjct: 584 tacctcgccatgctcatcgagta 606
>gb|CD903893.1|CD903893 G356.111M15F010919 G356 Triticum aestivum cDNA clone G356111M15,
mRNA sequence
Length = 629
Score = 115 bits (58), Expect = 4e-024
Identities = 170/206 (82%), Gaps = 1/206 (0%)
Strand = Plus / Plus
Query: 34 gccaggtggagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagc 93
|||||| |||||| || ||||| ||| ||||||||||||||||||| | |||||||||||
Sbjct: 421 gccaggaggagcctgtccacttcgacatgagcgggacggcgttcggcggcatggcgaagc 480
Query: 94 ccggccaggccgaccagctccggaacgccggccgcctgcaagtccagtacattcgggtgg 153
|||||||||||||||| ||||| ||||| || || ||| ||||||||| |||||
Sbjct: 481 ccggccaggccgaccaactccgcgcggccggacgtctccaaatccagtacacacgggtcc 540
Query: 154 cgtgcaactggaacggcttggacatcgccttcagggtggacgccggctcaaacgccaact 213
|| |||||||| || ||||||| ||||||| ||| ||||||||||| ||| || |||
Sbjct: 541 cgggcaactggccggggatggacatagccttcaaggtagacgccggctccaactcctact 600
Query: 214 acctggccatggccatcgagtacgag 239
|||| |||| | |||||||||||||
Sbjct: 601 acctcgcca-gctcatcgagtacgag 625
>gb|CD897610.1|CD897610 G174.106I03R011120 G174 Triticum aestivum cDNA clone G174106I03,
mRNA sequence
Length = 757
Score = 109 bits (55), Expect = 3e-022
Identities = 161/195 (82%), Gaps = 1/195 (0%)
Strand = Plus / Minus
Query: 64 gcgggacggcgtt-cggtgccatggcgaagcccggccaggccgaccagctccggaacgcc 122
||||||||||||| ||| | ||||||||| ||||||||||||||||||||||| |||
Sbjct: 757 gcgggacggcgtttcggcggcatggcgaatcccggccaggccgaccagctccgcgcggcc 698
Query: 123 ggccgcctgcaagtccagtacattcgggtggcgtgcaactggaacggcttggacatcgcc 182
|| || || ||| ||||||||| ||||| |||||| |||| || ||||||| |||
Sbjct: 697 ggacgtctccaaatccagtacacacgggtcccgtgcagctggccggggatggacatagcc 638
Query: 183 ttcagggtggacgccggctcaaacgccaactacctggccatggccatcgagtacgagtcc 242
|||| ||||||||||||||| ||| || ||||||| |||||| ||||||||||||| |
Sbjct: 637 ttcaaggtggacgccggctccaactcctactacctcgccatgctcatcgagtacgaggac 578
Query: 243 ggggacggggacctg 257
|| ||||| ||||||
Sbjct: 577 ggcgacggcgacctg 563
Score = 93.7 bits (47), Expect = 2e-017
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 354 ctgcaggcccccctgtctgtccgcctcacctcgggctccggcagggtcctcgtcgccagc 413
|||||||| ||| | || |||||||||||||| ||||||||| | |||||| || ||
Sbjct: 463 ctgcaggcgcccttctcggtccgcctcacctccagctccggcaagcccctcgtggcgagt 404
Query: 414 aacgtcatccccgccggatggcagcccggcagaacctaccgctccgtcgtcaact 468
|||||||||||| |||| ||| |||||||| | ||||||||||||||||||||||
Sbjct: 403 aacgtcatccccaccggctggaagcccggcggcacctaccgctccgtcgtcaact 349
>gb|BF428858.1|BF428858 WHE1710_C02_E04ZS Wheat heat stressed spike cDNA library Triticum
aestivum cDNA clone WHE1710_C02_E04, mRNA sequence
Length = 493
Score = 107 bits (54), Expect = 1e-021
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 42 gagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccag 101
|||||||| ||||| ||||||||||||||||||||||| | |||||| ||||||||||||
Sbjct: 413 gagcccgtccacttcgacctgagcgggacggcgttcggcggcatggcaaagcccggccag 472
Query: 102 gccgaccagctccg 115
||||||||||||||
Sbjct: 473 gccgaccagctccg 486
>gb|CD900158.1|CD900158 G174.114K12F010824 G174 Triticum aestivum cDNA clone G174114K12,
mRNA sequence
Length = 545
Score = 107 bits (54), Expect = 1e-021
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 34 gccaggtggagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagc 93
|||||| ||||||||| ||||| ||||||||||||||||||||||| | ||||||||| |
Sbjct: 400 gccaggaggagcccgtccacttcgacctgagcgggacggcgttcggcggcatggcgaatc 459
Query: 94 ccggccaggccgaccagctccg 115
|||||||| |||||||||||||
Sbjct: 460 ccggccagtccgaccagctccg 481
>gb|CD900159.1|CD900159 G174.114K12R011120 G174 Triticum aestivum cDNA clone G174114K12,
mRNA sequence
Length = 615
Score = 107 bits (54), Expect = 1e-021
Identities = 166/201 (82%), Gaps = 2/201 (0%)
Strand = Plus / Minus
Query: 57 gacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccagctccgg 116
||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||
Sbjct: 607 gacctgagcgggacggcgttcggcggcttggcgaagcccggccaggccgaccagctccgc 548
Query: 117 aacgccggccgcctgcaagtccagtacattcgggtggcgtgcaactggaacggcttggac 176
||||| || || ||| |||||||| ||||| |||||| |||| || |||||
Sbjct: 547 gcggccggacgtctccaaatccagtac-nccgggtcccgtgcagctggccggggatggac 489
Query: 177 atcgccttcagggtggacgccggctcaaacgccaactacctggccatggccatcgagtac 236
|| ||||||| ||||||||||||||| || || ||||||| |||||| ||||||||||
Sbjct: 488 atagccttca-ggtggacgccggctcccactcctactacctcgccatgctcatcgagtac 430
Query: 237 gagtccggggacggggacctg 257
||| ||| ||||| ||||||
Sbjct: 429 gaggacggcgacggcgacctg 409
Score = 93.7 bits (47), Expect = 2e-017
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 354 ctgcaggcccccctgtctgtccgcctcacctcgggctccggcagggtcctcgtcgccagc 413
|||||||| ||| | || |||||||||||||| ||||||||| | |||||| || ||
Sbjct: 309 ctgcaggcgcccttctcggtccgcctcacctccagctccggcaagcccctcgtggcgagt 250
Query: 414 aacgtcatccccgccggatggcagcccggcagaacctaccgctccgtcgtcaact 468
|||||||||||| |||| ||| |||||||| | ||||||||||||||||||||||
Sbjct: 249 aacgtcatccccaccggctggaagcccggcggcacctaccgctccgtcgtcaact 195
>gb|BJ299585.1|BJ299585 BJ299585 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl31b20 3', mRNA sequence
Length = 480
Score = 101 bits (51), Expect = 6e-020
Identities = 99/115 (86%)
Strand = Plus / Minus
Query: 354 ctgcaggcccccctgtctgtccgcctcacctcgggctccggcagggtcctcgtcgccagc 413
|||||||| ||| | || |||||||||||||| ||||||||| | |||||| || |||
Sbjct: 287 ctgcaggcgcccttctcggtccgcctcacctccagctccggcaagaccctcgtggcgagc 228
Query: 414 aacgtcatccccgccggatggcagcccggcagaacctaccgctccgtcgtcaact 468
||||||||||||||||| ||| |||| ||| | ||||||||||||||||||||||
Sbjct: 227 aacgtcatccccgccggctggaagcctggcggcacctaccgctccgtcgtcaact 173
Score = 67.9 bits (34), Expect = 9e-010
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 172 tggacatcgccttcagggtggacgccggctcaaacgccaactacctggccatggccatcg 231
||||||| ||||||| ||| ||||||||||| ||| || ||||||| |||||| |||||
Sbjct: 472 tggacatagccttcaaggtagacgccggctccaactcctactacctcgccatgctcatcg 413
Query: 232 agtacgagtccggggacggggacctg 257
|||||||| ||| ||||| ||||||
Sbjct: 412 agtacgaggacggcgacggcgacctg 387
>gb|BQ167140.1|BQ167140 WHE0058_A04_B08ZK Cheyenne wheat endosperm cDNA library Triticum
aestivum cDNA clone WHE0058_A04_B08, mRNA sequence
Length = 625
Score = 101 bits (51), Expect = 6e-020
Identities = 99/115 (86%)
Strand = Plus / Minus
Query: 354 ctgcaggcccccctgtctgtccgcctcacctcgggctccggcagggtcctcgtcgccagc 413
|||||||| ||| | || |||||||||||||| ||||||||| | |||||| || |||
Sbjct: 404 ctgcaggcgcccttctcggtccgcctcacctccagctccggcaagaccctcgtggcgagc 345
Query: 414 aacgtcatccccgccggatggcagcccggcagaacctaccgctccgtcgtcaact 468
||||||||||||||||| ||| |||| ||| | ||||||||||||||||||||||
Sbjct: 344 aacgtcatccccgccggctggaagcctggcggcacctaccgctccgtcgtcaact 290
Score = 40.1 bits (20), Expect = 0.20
Identities = 73/88 (82%), Gaps = 2/88 (2%)
Strand = Plus / Minus
Query: 172 tggacatcgccttcagggtggacgccggct-caaacgc-caactacctggccatggccat 229
||||||| || |||| ||| |||||||||| ||||| | |||||||| |||||| |||
Sbjct: 592 tggacatagctttcaaggtagacgccggctccaaactcttaactacctcgccatgctcat 533
Query: 230 cgagtacgagtccggggacggggacctg 257
|||||||||| ||| ||||| ||||||
Sbjct: 532 cgagtacgaggacggcgacggcgacctg 505
>gb|CD903894.1|CD903894 G356.111M15R011024 G356 Triticum aestivum cDNA clone G356111M15,
mRNA sequence
Length = 694
Score = 101 bits (51), Expect = 6e-020
Identities = 99/115 (86%)
Strand = Plus / Minus
Query: 354 ctgcaggcccccctgtctgtccgcctcacctcgggctccggcagggtcctcgtcgccagc 413
|||||||| ||| | || |||||||||||||| ||||||||| | |||||| || |||
Sbjct: 404 ctgcaggcgcccttctcggtccgcctcacctccagctccggcaagaccctcgtggcgagc 345
Query: 414 aacgtcatccccgccggatggcagcccggcagaacctaccgctccgtcgtcaact 468
||||||||||||||||| ||| |||| ||| | ||||||||||||||||||||||
Sbjct: 344 aacgtcatccccgccggctggaagcctggcggcacctaccgctccgtcgtcaact 290
Score = 58.0 bits (29), Expect = 8e-007
Identities = 155/193 (80%), Gaps = 3/193 (1%)
Strand = Plus / Minus
Query: 66 gggacggcgttcggtgccatggcgaagcccggccaggccgaccagctccggaacgccggc 125
|||||||| ||||| | |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 694 gggacggc-ttcggcggcatggcgaagcccgtccaggccgacccactccgcgcggccgga 636
Query: 126 cgcctgcaagtccagtacattcgggtggcgtgcaactggaacggcttggacatcgcctt- 184
|| || ||| ||||||||| ||||| ||||| ||||| || ||||||| |||||
Sbjct: 635 cgtctccaa-tccagtacacacgggtcccgtgccactggccggggatggacatagccttt 577
Query: 185 cagggtggacgccggctcaaacgccaactacctggccatggccatcgagtacgagtccgg 244
|| ||| ||||||||||| ||| || ||||||| |||||| ||||||||||||| |||
Sbjct: 576 caaggtagacgccggctccaactcctactacctcgccatgctcatcgagtacgaggacgg 517
Query: 245 ggacggggacctg 257
||||| ||||||
Sbjct: 516 cgacggcgacctg 504
>gb|BE498763.1|BE498763 WHE0965_B09_D17ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0965_B09_D17, mRNA sequence
Length = 385
Score = 97.6 bits (49), Expect = 1e-018
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 372 gtccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccgga 431
|||||||||||||| ||||||||| | |||||| || ||||| ||||||||||||||
Sbjct: 37 gtccgcctcacctccagctccggcaagcccctcgtggcgagcaaagtcatccccgccggc 96
Query: 432 tggcagcccggcagaacctaccgctccgtcgtcaact 468
||| |||||||| | ||||||||||||||||||||||
Sbjct: 97 tggaagcccggcggcacctaccgctccgtcgtcaact 133
>gb|CD933822.1|CD933822 GR45.122B21F010721 GR45 Triticum aestivum cDNA clone GR45122B21,
mRNA sequence
Length = 445
Score = 97.6 bits (49), Expect = 1e-018
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 372 gtccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccgga 431
|||||||||||||| ||||||||| | |||||| || ||||| ||||||||||||||
Sbjct: 50 gtccgcctcacctccagctccggcaagcccctcgtggcgagcaaagtcatccccgccggc 109
Query: 432 tggcagcccggcagaacctaccgctccgtcgtcaact 468
||| |||||||| | ||||||||||||||||||||||
Sbjct: 110 tggaagcccggcggcacctaccgctccgtcgtcaact 146
>gb|BJ240582.1|BJ240582 BJ240582 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe16e02 3', mRNA sequence
Length = 556
Score = 93.7 bits (47), Expect = 2e-017
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 354 ctgcaggcccccctgtctgtccgcctcacctcgggctccggcagggtcctcgtcgccagc 413
|||||||| ||| | || |||||||||||||| ||||||||| | |||||| || ||
Sbjct: 324 ctgcaggcgcccttctcggtccgcctcacctccagctccggcaagcccctcgtggcgagt 265
Query: 414 aacgtcatccccgccggatggcagcccggcagaacctaccgctccgtcgtcaact 468
|||||||||||| |||| ||| |||||||| | ||||||||||||||||||||||
Sbjct: 264 aacgtcatccccaccggctggaagcccggcggcacctaccgctccgtcgtcaact 210
Score = 71.9 bits (36), Expect = 6e-011
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 172 tggacatcgccttcagggtggacgccggctcaaacgccaactacctggccatggccatcg 231
||||||| ||||||| ||||||||||||||| ||| || ||||||| |||||| |||||
Sbjct: 509 tggacatagccttcaaggtggacgccggctccaactcctactacctcgccatgctcatcg 450
Query: 232 agtacgag 239
||||||||
Sbjct: 449 agtacgag 442
>gb|BJ242327.1|BJ242327 BJ242327 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe23c04 3', mRNA sequence
Length = 669
Score = 93.7 bits (47), Expect = 2e-017
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 354 ctgcaggcccccctgtctgtccgcctcacctcgggctccggcagggtcctcgtcgccagc 413
|||||||| ||| | || |||||||||||||| ||||||||| | |||||| || ||
Sbjct: 439 ctgcaggcgcccttctcggtccgcctcacctccagctccggcaagcccctcgtggcgagt 380
Query: 414 aacgtcatccccgccggatggcagcccggcagaacctaccgctccgtcgtcaact 468
|||||||||||| |||| ||| |||||||| | ||||||||||||||||||||||
Sbjct: 379 aacgtcatccccaccggctggaagcccggcggcacctaccgctccgtcgtcaact 325
Score = 61.9 bits (31), Expect = 5e-008
Identities = 74/87 (85%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 172 tggacatcgccttcagggtggacgcc-ggctcaaacgccaactacctggccatggccatc 230
||||||| ||||||| |||||||||| ||||| ||| || ||||||| |||||| ||||
Sbjct: 626 tggacatagccttcaaggtggacgccgggctccaactcctactacctcgccatgctcatc 567
Query: 231 gagtacgagtccggggacggggacctg 257
||||||||| ||| ||||| ||||||
Sbjct: 566 gagtacgaggacggcgacggcgacctg 540
>gb|CD893800.1|CD893800 G118.124J02R011116 G118 Triticum aestivum cDNA clone G118124J02,
mRNA sequence
Length = 651
Score = 93.7 bits (47), Expect = 2e-017
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 354 ctgcaggcccccctgtctgtccgcctcacctcgggctccggcagggtcctcgtcgccagc 413
|||||||| ||| | || |||||||||||||| ||||||||| | |||||| || ||
Sbjct: 412 ctgcaggcgcccttttcggtccgcctcacctccagctccggcaagcccctcgtggcgagt 353
Query: 414 aacgtcatccccgccggatggcagcccggcagaacctaccgctccgtcgtcaact 468
|||||||||||| |||| ||| |||||||| | ||||||||||||||||||||||
Sbjct: 352 aacgtcatccccaccggctggaagcccggcggcacctaccgctccgtcgtcaact 298
Score = 60.0 bits (30), Expect = 2e-007
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 172 tggacatcgccttcagggtggacgccggctcaaacgccaactacctggccatggccatcg 231
||||||| || |||| ||||||||||||||| ||| || ||||||| ||||| |||||
Sbjct: 597 tggacatagctttcaaggtggacgccggctccaactcctactacctccccatgctcatcg 538
Query: 232 agtacgagtccggggacggggacctg 257
|||||||| ||| ||||| ||||||
Sbjct: 537 agtacgaggacggcgacggcgacctg 512
>gb|CD914851.1|CD914851 G550.124E07F010712 G550 Triticum aestivum cDNA clone G550124E07,
mRNA sequence
Length = 513
Score = 93.7 bits (47), Expect = 2e-017
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 354 ctgcaggcccccctgtctgtccgcctcacctcgggctccggcagggtcctcgtcgccagc 413
|||||||| ||| | || |||||||||||||| ||||||||| | |||||| || ||
Sbjct: 101 ctgcaggcgcccttctcggtccgcctcacctccagctccggcaagcccctcgtggcgagt 160
Query: 414 aacgtcatccccgccggatggcagcccggcagaacctaccgctccgtcgtcaact 468
|||||||||||| |||| ||| |||||||| | ||||||||||||||||||||||
Sbjct: 161 aacgtcatccccaccggctggaagcccggcggcacctaccgctccgtcgtcaact 215
>gb|CV066380.1|CV066380 WNEL3b8 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL3b8 5' similar to Zea mays PCO119167 mRNA sequence
Length = 469
Score = 81.8 bits (41), Expect = 6e-014
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 81 gccatggcgaagcccggccaggccgaccagctccggaacgccggccgcctgcaagtccag 140
||||||||||||||||||||||||||| | ||||| || |||||| || | ||||||
Sbjct: 1 gccatggcgaagcccggccaggccgacaacctccgcaaagccggcagcattagagtccat 60
Query: 141 tacattcgggtggcgtgcaactggaacggcttggacatcgccttcagggtggacgccggc 200
|||| ||||| ||||||||||| |||| ||||||||| |||| ||||||||| |||
Sbjct: 61 tacaaccgggttccgtgcaactggcacgggatggacatcgttttcaaggtggacgcaggc 120
Query: 201 tcaaacgccaactacct 217
|| ||| | ||||||||
Sbjct: 121 tccaacccgaactacct 137
Score = 63.9 bits (32), Expect = 1e-008
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 373 tccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggat 432
||||||||||||| |||||||||| | ||| |||||||||| ||||| ||| ||||||
Sbjct: 287 tccgcctcacctccggctccggcaagcagctcatcgccagcaatgtcattccctccggat 346
Query: 433 ggcagcccggcagaacctaccgctccgtcgtcaact 468
|||| |||| || |||||||| ||| |||| ||||
Sbjct: 347 ggcacgccggaaggacctaccggtccatcgtaaact 382
>gb|BJ246126.1|BJ246126 BJ246126 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf21j15 5', mRNA sequence
Length = 629
Score = 79.8 bits (40), Expect = 2e-013
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 54 tttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccagctc 113
|||||||| ||||| ||||||||||| ||||||||||||||||||||| |||| |||||
Sbjct: 437 tttgacctcagcggcacggcgttcggcgccatggcgaagcccggccagaacgacaagctc 496
Query: 114 cggaacgccggc 125
|| ||||||||
Sbjct: 497 cgccacgccggc 508
>gb|BJ222680.1|BJ222680 BJ222680 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl15e03 5', mRNA sequence
Length = 515
Score = 73.8 bits (37), Expect = 1e-011
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 57 gacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccagctccgg 116
||||| ||||| ||||||||||| ||||||||||||||||||||| |||| |||||||
Sbjct: 431 gacctcagcggcacggcgttcggcgccatggcgaagcccggccagaacgacaagctccgc 490
Query: 117 aacgccggc 125
||||||||
Sbjct: 491 cacgccggc 499
>gb|BJ247259.1|BJ247259 BJ247259 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf28f05 5', mRNA sequence
Length = 624
Score = 73.8 bits (37), Expect = 1e-011
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 57 gacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccagctccgg 116
||||| ||||| ||||||||||| ||||||||||||||||||||| |||| |||||||
Sbjct: 399 gacctcagcggcacggcgttcggcgccatggcgaagcccggccagaacgacaagctccgc 458
Query: 117 aacgccggc 125
||||||||
Sbjct: 459 cacgccggc 467
>gb|BQ245149.1|BQ245149 TaE15030A03R TaE15 Triticum aestivum cDNA clone TaE15030A03R, mRNA
sequence
Length = 524
Score = 73.8 bits (37), Expect = 1e-011
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 57 gacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccagctccgg 116
||||| ||||| ||||||||||| ||||||||||||||||||||| |||| |||||||
Sbjct: 443 gacctcagcggcacggcgttcggcgccatggcgaagcccggccagaacgacaagctccgc 502
Query: 117 aacgccggc 125
||||||||
Sbjct: 503 cacgccggc 511
>gb|CA725021.1|CA725021 wds3f.pk003.m6 wds3f Triticum aestivum cDNA clone wds3f.pk003.m6 5'
end, mRNA sequence
Length = 436
Score = 73.8 bits (37), Expect = 1e-011
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 57 gacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccagctccgg 116
||||| ||||| ||||||||||| ||||||||||||||||||||| |||| |||||||
Sbjct: 292 gacctcagcggcacggcgttcggcgccatggcgaagcccggccagaacgacaagctccgc 351
Query: 117 aacgccggc 125
||||||||
Sbjct: 352 cacgccggc 360
>gb|CK167447.1|CK167447 FGAS051809 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1159
Score = 73.8 bits (37), Expect = 1e-011
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 57 gacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccagctccgg 116
||||| ||||| ||||||||||| ||||||||||||||||||||| |||| |||||||
Sbjct: 523 gacctcagcggcacggcgttcggcgccatggcgaagcccggccagaacgacaagctccgc 582
Query: 117 aacgccggc 125
||||||||
Sbjct: 583 cacgccggc 591
>gb|CK168342.1|CK168342 FGAS052869 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1139
Score = 73.8 bits (37), Expect = 1e-011
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 57 gacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccagctccgg 116
||||| ||||| ||||||||||| ||||||||||||||||||||| |||| |||||||
Sbjct: 520 gacctcagcggcacggcgttcggcgccatggcgaagcccggccagaacgacaagctccgc 579
Query: 117 aacgccggc 125
||||||||
Sbjct: 580 cacgccggc 588
>gb|AY589581.1| Triticum aestivum beta-expansin TaEXPB4 mRNA, complete cds
Length = 898
Score = 73.8 bits (37), Expect = 1e-011
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 57 gacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccagctccgg 116
||||| ||||| ||||||||||| ||||||||||||||||||||| |||| |||||||
Sbjct: 424 gacctcagcggcacggcgttcggcgccatggcgaagcccggccagaacgacaagctccgc 483
Query: 117 aacgccggc 125
||||||||
Sbjct: 484 cacgccggc 492
>gb|BQ169719.1|BQ169719 WHE0965_B09_D17ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0965_B09_D17, mRNA sequence
Length = 458
Score = 71.9 bits (36), Expect = 6e-011
Identities = 85/99 (85%), Gaps = 2/99 (2%)
Strand = Plus / Minus
Query: 372 gtccgcctcacctcgggctccggcagggtcctcgtcgccagcaacgtcat-ccccgccgg 430
|||||||||||||| ||||||||| | |||||| || ||||| ||||| |||||||||
Sbjct: 411 gtccgcctcacctccagctccggcaagcccctcgtggcgagcaaagtcatcccccgccgg 352
Query: 431 atggcagcccggc-agaacctaccgctccgtcgtcaact 468
||| |||||||| | ||||||||||||||||||||||
Sbjct: 351 ctggaagcccggcgngcacctaccgctccgtcgtcaact 313
>gb|BQ236169.1|BQ236169 TaE05037C12F TaE05 Triticum aestivum cDNA clone TaE05037C12F, mRNA
sequence
Length = 603
Score = 69.9 bits (35), Expect = 2e-010
Identities = 118/145 (81%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 324 gtgtggcagtacaagtccggctccaccaatctgcaggcccccctgtctgtccgcctcacc 383
|||||| ||||||||||| | |||||| || ||||||||| | ||| || ||||||||
Sbjct: 254 gtgtggaagtacaagtccaggtccacc---ctacaggcccccatatctatcggcctcacc 198
Query: 384 tcgggctccggcagggtcctcgtcgccagcaacgtcatccccgccggatggcagcccggc 443
| |||||||||| | ||| |||||||||| ||||| ||| ||||||||||| | ||
Sbjct: 197 ttcggctccggcaagcagctcatcgccagcaatgtcattccctccggatggcaggctgga 138
Query: 444 agaacctaccgctccgtcgtcaact 468
|| |||||||| |||||||| ||||
Sbjct: 137 aggacctaccgatccgtcgtaaact 113
Score = 65.9 bits (33), Expect = 3e-009
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgac 107
||||| ||||| ||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 524 cacttcgaccttagcgggaaagcgttcggcgccatggcaaagcccggccaggccgac 468
>gb|CA606615.1|CA606615 wr1.pk0070.b10 wr1 Triticum aestivum cDNA clone wr1.pk0070.b10 5'
end, mRNA sequence
Length = 362
Score = 69.9 bits (35), Expect = 2e-010
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 378 ctcacctcgggctccggcagggtcctcgtcgccagcaacgtcatccccgcc 428
|||||||| | |||||||||||||||||||| || ||||||||||||||||
Sbjct: 35 ctcacctccgactccggcagggtcctcgtcgtcaacaacgtcatccccgcc 85
>gb|BJ292999.1|BJ292999 BJ292999 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl30b20 5', mRNA sequence
Length = 470
Score = 65.9 bits (33), Expect = 3e-009
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 34 gccaggtggagcccgtgcactttgacctgagcgggacggcgttcggtgccatggcgaagc 93
|||||| |||||| || ||||| ||| ||||||||||||||||||| | |||||||||||
Sbjct: 410 gccaggaggagcctgtccacttcgacatgagcgggacggcgttcggcggcatggcgaagc 469
Query: 94 c 94
|
Sbjct: 470 c 470
>gb|CD885826.1|CD885826 G118.100J07F010507 G118 Triticum aestivum cDNA clone G118100J07,
mRNA sequence
Length = 672
Score = 65.9 bits (33), Expect = 3e-009
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgac 107
||||| ||||| ||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 416 cacttcgaccttagcgggaaagcgttcggcgccatggcaaagcccggccaggccgac 472
>gb|CK166717.1|CK166717 FGAS050915 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1151
Score = 65.9 bits (33), Expect = 3e-009
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 57 gacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccagctccgg 116
||||| ||||| |||||||| || ||||||||||||||||||||| |||| |||||||
Sbjct: 870 gacctcagcggcacggcgtttggcgccatggcgaagcccggccagaacgacaagctccgc 811
Query: 117 aacgccggc 125
||||||||
Sbjct: 810 cacgccggc 802
>gb|AJ614162.1|AJ614162 AJ614162 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 09830R, mRNA
sequence
Length = 690
Score = 65.9 bits (33), Expect = 3e-009
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 57 gacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccagctccgg 116
||||| ||||| ||||||||||| |||||||||||||| |||||| |||| |||||||
Sbjct: 453 gacctcagcggcacggcgttcggcgccatggcgaagcctggccagaacgacaagctccgc 512
Query: 117 aacgccggc 125
||||||||
Sbjct: 513 cacgccggc 521
>gb|CV780550.1|CV780550 FGAS074961 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 847
Score = 65.9 bits (33), Expect = 3e-009
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 57 gacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgaccagctccgg 116
||||| ||||| ||||||||||| |||||||||||||| |||||| |||| |||||||
Sbjct: 534 gacctcagcggcacggcgttcggcgccatggcgaagcctggccagaacgacaagctccgc 593
Query: 117 aacgccggc 125
||||||||
Sbjct: 594 cacgccggc 602
>gb|BE493526.1|BE493526 WHE0579_B12_B12ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0579_B12_B12, mRNA
sequence
Length = 492
Score = 63.9 bits (32), Expect = 1e-008
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 70 cggcgttcggtgccatggcgaagcccggccaggccgaccagctccggaacgccggc 125
|||||||||| ||||||||||||||||||||| |||| ||||||| ||||||||
Sbjct: 13 cggcgttcggcgccatggcgaagcccggccagaacgacaagctccgccacgccggc 68
>gb|BE499408.1|BE499408 WHE0974_G07_N14ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0974_G07_N14, mRNA sequence
Length = 572
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggcc 99
||||| ||||||||||| || |||||||| |||||||| ||||||||||
Sbjct: 71 cacttcgacctgagcggcaccgcgttcggcgccatggccaagcccggcc 119
>gb|BQ239090.1|BQ239090 TaE05037C12R TaE05 Triticum aestivum cDNA clone TaE05037C12R, mRNA
sequence
Length = 554
Score = 58.0 bits (29), Expect = 8e-007
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggccaggccgac 107
||||| ||||| ||||||| |||| ||| |||||||| ||||||||||||||||||
Sbjct: 425 cacttcgaccttagcgggaaagcgtgcggcgccatggcaaagcccggccaggccgac 481
>gb|BQ807160.1|BQ807160 WHE3587_E04_I07ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3587_E04_I07, mRNA sequence
Length = 753
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggcc 99
||||| ||||||||||| || |||||||| |||||||| ||||||||||
Sbjct: 456 cacttcgacctgagcggcaccgcgttcggcgccatggccaagcccggcc 504
>gb|BQ807275.1|BQ807275 WHE3588_H04_O08ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3588_H04_O08, mRNA sequence
Length = 646
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggcc 99
||||| ||||||||||| || |||||||| |||||||| ||||||||||
Sbjct: 461 cacttcgacctgagcggcaccgcgttcggcgccatggccaagcccggcc 509
>gb|BJ224620.1|BJ224620 BJ224620 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl19i21 5', mRNA sequence
Length = 657
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggcc 99
||||| ||||||||||| || |||||||| |||||||| ||||||||||
Sbjct: 439 cacttcgacctgagcggcaccgcgttcggcgccatggccaagcccggcc 487
>gb|BJ234533.1|BJ234533 BJ234533 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe5l12 5', mRNA sequence
Length = 537
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 51 cactttgacctgagcgggacggcgttcggtgccatggcgaagcccggcc 99
||||| ||||||||||| || |||||||| |||||||| ||||||||||
Sbjct: 452 cacttcgacctgagcggcaccgcgttcggcgccatggccaagcccggcc 500
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 193,380
Number of Sequences: 636343
Number of extensions: 193380
Number of successful extensions: 71541
Number of sequences better than 0.5: 109
Number of HSP's better than 0.5 without gapping: 107
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 71346
Number of HSP's gapped (non-prelim): 184
length of query: 697
length of database: 367,240,239
effective HSP length: 19
effective length of query: 678
effective length of database: 355,149,722
effective search space: 240791511516
effective search space used: 240791511516
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)