BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3802552.2.1
(252 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE499236.1|BE499236 WHE0972_G03_M06ZS Wheat pre-anthesis... 184 2e-045
gb|BQ789476.1|BQ789476 WHE4161_G12_N23ZS Wheat CS whole pla... 184 2e-045
gb|AL815693.1|AL815693 AL815693 j:223 Triticum aestivum cDN... 184 2e-045
gb|CV765655.1|CV765655 FGAS060042 Triticum aestivum FGAS: L... 182 7e-045
gb|CK207880.1|CK207880 FGAS019552 Triticum aestivum FGAS: L... 167 4e-040
gb|BJ245733.1|BJ245733 BJ245733 Y. Ogihara unpublished cDNA... 159 1e-037
gb|CV779545.1|CV779545 FGAS073954 Triticum aestivum FGAS: L... 159 1e-037
gb|CD903041.1|CD903041 G356.108O23F010918 G356 Triticum aes... 155 2e-036
gb|BJ251623.1|BJ251623 BJ251623 Y. Ogihara unpublished cDNA... 137 4e-031
gb|BQ620656.1|BQ620656 TaLr1135H07R TaLr1 Triticum aestivum... 137 4e-031
gb|AY286095.1| Triticum aestivum cultivar Chinese Spring ch... 131 2e-029
gb|BQ620775.1|BQ620775 TaLr1174B04R TaLr1 Triticum aestivum... 129 1e-028
gb|AY286093.1| Triticum aestivum chalcone synthase (CHS) ge... 121 2e-026
gb|AY286096.1| Triticum aestivum chalcone synthase gene, co... 121 2e-026
gb|AY286097.1| Triticum aestivum chalcone synthase (CHS) mR... 121 2e-026
gb|DR738384.1|DR738384 FGAS083601 Triticum aestivum FGAS: L... 113 6e-024
gb|AY286098.1| Triticum aestivum chalcone synthase (CHS1) m... 113 6e-024
gb|CV764631.1|CV764631 FGAS059016 Triticum aestivum FGAS: L... 103 6e-021
gb|AL827771.1|AL827771 AL827771 p:739 Triticum aestivum cDN... 98 3e-019
gb|DR740814.1|DR740814 FGAS000747 Triticum aestivum FGAS: L... 98 3e-019
dbj|AB187025.1| Triticum aestivum CHS gene for chalcone syn... 98 3e-019
gb|CA687970.1|CA687970 wlm96.pk040.e5 wlm96 Triticum aestiv... 94 5e-018
gb|CL901791.1|CL901791 CSHC1166 1639HC library Triticum aes... 88 3e-016
gb|CK211284.1|CK211284 FGAS023119 Triticum aestivum FGAS: L... 82 2e-014
gb|AF142566.1|AF142566 Triticum aestivum chalcone synthase ... 76 1e-012
gb|BT009410.1| Triticum aestivum clone wlm96.pk061.i14:fis,... 72 2e-011
gb|CA732600.1|CA732600 wlp1c.pk004.h5 wlp1c Triticum aestiv... 68 3e-010
gb|CK204212.1|CK204212 FGAS012748 Triticum aestivum FGAS: L... 68 3e-010
gb|BQ743464.1|BQ743464 WHE4104_C08_F16ZS Wheat salt-stresse... 66 1e-009
gb|CA700759.1|CA700759 wkm1c.pk006.c13 wkm1c Triticum aesti... 66 1e-009
gb|CV763535.1|CV763535 FGAS057924 Triticum aestivum FGAS: L... 66 1e-009
gb|CV775261.1|CV775261 FGAS069664 Triticum aestivum FGAS: L... 66 1e-009
gb|BG604814.1|BG604814 WHE0943_E09_J17ZS Wheat 5-15 DAP spi... 64 5e-009
gb|CD892534.1|CD892534 G118.121E01F010725 G118 Triticum aes... 64 5e-009
gb|CD899597.1|CD899597 G174.112O22F010824 G174 Triticum aes... 64 5e-009
gb|CD935926.1|CD935926 OV.102N20F010202 OV Triticum aestivu... 64 5e-009
gb|DR735687.1|DR735687 FGAS081321 Triticum aestivum FGAS: L... 64 5e-009
gb|BT009068.1| Triticum aestivum clone wfl1c.pk001.k16:fis,... 64 5e-009
gb|CK209559.1|CK209559 FGAS021329 Triticum aestivum FGAS: L... 62 2e-008
gb|CV779002.1|CV779002 FGAS073411 Triticum aestivum FGAS: L... 58 3e-007
gb|BF473448.1|BF473448 WHE0924_E09_J18ZS Wheat 5-15 DAP spi... 56 1e-006
gb|BG262789.1|BG262789 WHE0945_C07_E13ZS Wheat 5-15 DAP spi... 56 1e-006
gb|CA704686.1|CA704686 wdk1c.pk013.n9 wdk1c Triticum aestiv... 54 5e-006
gb|CA729185.1|CA729185 wdi1c.pk007.o12 wdi1c Triticum aesti... 54 5e-006
gb|CK163042.1|CK163042 FGAS015656 Triticum aestivum FGAS: L... 54 5e-006
gb|CK163413.1|CK163413 FGAS016040 Triticum aestivum FGAS: L... 54 5e-006
gb|CA713174.1|CA713174 wdk3c.pk011.a6 wdk3c Triticum aestiv... 50 7e-005
gb|AJ603637.1|AJ603637 AJ603637 T07 Triticum aestivum cDNA ... 48 3e-004
gb|DR738535.1|DR738535 FGAS083752 Triticum aestivum FGAS: L... 48 3e-004
gb|BQ789335.1|BQ789335 WHE4160_C01_E02ZS Wheat CS whole pla... 46 0.001
gb|CK161569.1|CK161569 FGAS014140 Triticum aestivum FGAS: L... 46 0.001
gb|AJ613617.1|AJ613617 AJ613617 Triticum turgidum subsp. du... 46 0.001
gb|CV760721.1|CV760721 FGAS055107 Triticum aestivum FGAS: L... 46 0.001
gb|CV767274.1|CV767274 FGAS061663 Triticum aestivum FGAS: L... 46 0.001
gb|AL827062.1|AL827062 AL827062 p:638 Triticum aestivum cDN... 44 0.004
gb|CV776480.1|CV776480 FGAS070884 Triticum aestivum FGAS: L... 44 0.004
gb|AY910582.1| Triticum aestivum expansin EXPA12 mRNA, comp... 42 0.017
gb|BJ214131.1|BJ214131 BJ214131 Y. Ogihara unpublished cDNA... 40 0.069
gb|BJ221615.1|BJ221615 BJ221615 Y. Ogihara unpublished cDNA... 40 0.069
gb|BJ271674.1|BJ271674 BJ271674 Y. Ogihara unpublished cDNA... 40 0.069
gb|BJ271840.1|BJ271840 BJ271840 Y. Ogihara unpublished cDNA... 40 0.069
gb|BJ276889.1|BJ276889 BJ276889 Y. Ogihara unpublished cDNA... 40 0.069
gb|BJ277071.1|BJ277071 BJ277071 Y. Ogihara unpublished cDNA... 40 0.069
gb|BJ304074.1|BJ304074 BJ304074 Y. Ogihara unpublished cDNA... 40 0.069
gb|BJ310000.1|BJ310000 BJ310000 Y. Ogihara unpublished cDNA... 40 0.069
gb|AL817506.1|AL817506 AL817506 l:226 Triticum aestivum cDN... 40 0.069
gb|BQ807236.1|BQ807236 WHE3588_D07_G14ZS Wheat developing g... 40 0.069
gb|CA597923.1|CA597923 wyr1c.pk001.j13 wyr1c Triticum aesti... 40 0.069
gb|CA635423.1|CA635423 wle1n.pk0101.f9 wle1n Triticum aesti... 40 0.069
gb|CA642337.1|CA642337 wre1n.pk0054.h3 wre1n Triticum aesti... 40 0.069
gb|CA655916.1|CA655916 wlm0.pk0019.c2 wlm0 Triticum aestivu... 40 0.069
gb|CA712876.1|CA712876 wdk3c.pk015.n11 wdk3c Triticum aesti... 40 0.069
gb|CA730377.1|CA730377 wip1c.pk004.o13 wip1c Triticum aesti... 40 0.069
gb|CA742046.1|CA742046 wet1c.pk001.i14 wet1c Triticum aesti... 40 0.069
gb|CD907516.1|CD907516 G468.107D10F010814 G468 Triticum aes... 40 0.069
gb|CK153977.1|CK153977 FGAS032670 Triticum aestivum FGAS: T... 40 0.069
gb|CK154803.1|CK154803 FGAS033519 Triticum aestivum FGAS: T... 40 0.069
gb|CK154815.1|CK154815 FGAS033531 Triticum aestivum FGAS: T... 40 0.069
gb|AL809940.1|AL809940 AL809940 d:15 Triticum aestivum cDNA... 40 0.069
gb|CV782731.1|CV782731 FGAS077144 Triticum aestivum FGAS: L... 40 0.069
gb|DN949098.1|DN949098 KUCD01_13_B02_T3 WSWR cDNA library T... 40 0.069
gb|BE499682.1|BE499682 WHE0959_E09_I17ZS Wheat pre-anthesis... 38 0.27
gb|BE604551.1|BE604551 WHE1413-1416_P13_P13ZS Wheat drought... 38 0.27
gb|BJ234145.1|BJ234145 BJ234145 Y. Ogihara unpublished cDNA... 38 0.27
gb|BJ310008.1|BJ310008 BJ310008 Y. Ogihara unpublished cDNA... 38 0.27
gb|BQ579499.1|BQ579499 WHE2971_B05_C09ZS Wheat dormant embr... 38 0.27
gb|CA714170.1|CA714170 wdk3c.pk018.o16 wdk3c Triticum aesti... 38 0.27
gb|CK207874.1|CK207874 FGAS019546 Triticum aestivum FGAS: L... 38 0.27
gb|CV771538.1|CV771538 FGAS065931 Triticum aestivum FGAS: L... 38 0.27
>gb|BE499236.1|BE499236 WHE0972_G03_M06ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0972_G03_M06, mRNA sequence
Length = 585
Score = 184 bits (93), Expect = 2e-045
Identities = 182/212 (85%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||||||||| || ||||| |||||||| ||||| ||| | |||||||||||||| ||
Sbjct: 332 gtaccagcagggctgcttcgccggcggcaccgtgctccgcctcgccaaggacctcgccga 391
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||||||||| ||||| || || |||||||||||||| | ||||| |||||
Sbjct: 392 gaacaaccgcggcgcgcgcgtgctcgtcgtctgctccgagatcaccgcggtcaccttccg 451
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|||||| |||||| |||||||||||||| || ||||||||||| || ||||| |||||
Sbjct: 452 cggcccgcacgagtcccacctcgactcgctggtcggccaggcgctctttggcgatggcgc 511
Query: 192 ggcggccgtggtcgtgggcgccgacccggacg 223
||| || ||| |||| ||||||||||| ||||
Sbjct: 512 ggccgcggtgatcgtcggcgccgaccccgacg 543
>gb|BQ789476.1|BQ789476 WHE4161_G12_N23ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4161_G12_N23, mRNA sequence
Length = 813
Score = 184 bits (93), Expect = 2e-045
Identities = 182/212 (85%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||||||||| || ||||| |||||||| ||||| ||| | |||||||||||||| ||
Sbjct: 29 gtaccagcagggctgcttcgccggcggcaccgtgctccgcctcgccaaggacctcgccga 88
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||||||||| ||||| || || |||||||||||||| | |||||| |||||
Sbjct: 89 gaacaaccgcggcgcgcgcgtgctcgtcgtctgctccgagatcaccgccgtcaccttccg 148
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|||||| |||||| ||||||||||| ||||| ||||||||||| |||||||| || ||
Sbjct: 149 cggcccgcacgagtcccacctcgactccctcgtcggccaggcgctcttcggcgatggtgc 208
Query: 192 ggcggccgtggtcgtgggcgccgacccggacg 223
||| || ||| || | ||||||||||| ||||
Sbjct: 209 ggccgcggtgatcatcggcgccgaccccgacg 240
>gb|AL815693.1|AL815693 AL815693 j:223 Triticum aestivum cDNA clone H07_j223_plate_8, mRNA
sequence
Length = 519
Score = 184 bits (93), Expect = 2e-045
Identities = 182/212 (85%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||||||||| || ||||| |||||||| ||||| ||| | |||||||||||||| ||
Sbjct: 107 gtaccagcagggctgcttcgccggcggcaccgtgctccgcctcgccaaggacctcgccga 166
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||||||||| ||||| || || |||||||||||||| | ||||| |||||
Sbjct: 167 gaacaaccgcggcgcgcgcgtgctcgtcgtctgctccgagatcaccgcggtcaccttccg 226
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|||||| |||||| |||||||||||||| || ||||||||||| || ||||| |||||
Sbjct: 227 cggcccgcacgagtcccacctcgactcgctggtcggccaggcgctctttggcgatggcgc 286
Query: 192 ggcggccgtggtcgtgggcgccgacccggacg 223
||| || ||| |||| ||||||||||| ||||
Sbjct: 287 ggccgcggtgatcgtcggcgccgaccccgacg 318
>gb|CV765655.1|CV765655 FGAS060042 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 815
Score = 182 bits (92), Expect = 7e-045
Identities = 160/183 (87%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||||||||| || ||||| |||||||||||||| ||| |||||||||||||||| ||
Sbjct: 401 gtaccagcagggctgcttcgccggcggcacggtgctccgcctggccaaggacctcgccga 460
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||||||||| ||||| || || ||||| |||||||| | || || |||||
Sbjct: 461 gaacaaccgcggcgcgcgcgtgctcgtcgtctgctcggagatcaccgcggtgaccttccg 520
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
||||| |||||| |||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 521 tggcccgcacgagtcccacctcgactcgctggtgggccaggcgctcttcggcgacggcgc 580
Query: 192 ggc 194
|||
Sbjct: 581 ggc 583
>gb|CK207880.1|CK207880 FGAS019552 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1142
Score = 167 bits (84), Expect = 4e-040
Identities = 151/174 (86%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||||||||| || ||||| |||||||| ||||| ||| | |||||||||||||| ||
Sbjct: 582 gtaccagcagggctgcttcgccggcggcaccgtgctccgcctcgccaaggacctcgccga 641
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||||||||| ||||| || || |||||||||||||| | |||||| |||||
Sbjct: 642 gaacaaccgcggcgcgcgcgtgctcgtcgtctgctccgagatcaccgccgtcaccttccg 701
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcga 185
||| || |||||| ||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 702 cggnccgcacgagtcccacctcgactccctcgtcggccaggcgctcttcggcga 755
>gb|BJ245733.1|BJ245733 BJ245733 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf1o20 5', mRNA sequence
Length = 697
Score = 159 bits (80), Expect = 1e-037
Identities = 145/167 (86%)
Strand = Plus / Plus
Query: 28 ttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcg 87
||||| |||||||| ||||| ||| | |||||||||||||| ||||||||||||||||||
Sbjct: 6 ttcgccggcggcaccgtgctccgcctcgccaaggacctcgccgagaacaaccgcggcgcg 65
Query: 88 cgggtgctggtggtgtgctccgagatcacggncgtcacgttccgcggcccctccgagtcg 147
|| ||||| || || |||||||||||||| | |||||| ||||||||||| ||||||
Sbjct: 66 cgcgtgctcgtcgtctgctccgagatcaccgccgtcaccttccgcggcccgcacgagtcc 125
Query: 148 cacctcgactcgctcgtgggccaggcgctgttcggcgacggcgcggc 194
||||||||||| ||||| ||||||||||| |||||||| || |||||
Sbjct: 126 cacctcgactccctcgtcggccaggcgctcttcggcgatggtgcggc 172
>gb|CV779545.1|CV779545 FGAS073954 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 844
Score = 159 bits (80), Expect = 1e-037
Identities = 158/183 (86%), Gaps = 1/183 (0%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||||||||| || ||||| |||||||||||||| ||| |||||||||||||||| ||
Sbjct: 512 gtaccagcagggctgcttcgccggcggcacggtgctccgcctggccaaggacctcgccga 571
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||||||||| ||||| || || ||||| |||||||| | || || |||||
Sbjct: 572 gaacaaccgcggcgcgcgcgtgctcgtcgtctgctcggagatcaccgcggtgaccttccg 631
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
||||| |||||| |||||| ||||||| ||||| |||||||| ||||||||||||||
Sbjct: 632 tggcccgcacgagtcccacctccactcgctggtggg-caggcgctcttcggcgacggcgc 690
Query: 192 ggc 194
|||
Sbjct: 691 ggc 693
>gb|CD903041.1|CD903041 G356.108O23F010918 G356 Triticum aestivum cDNA clone G356108O23,
mRNA sequence
Length = 650
Score = 155 bits (78), Expect = 2e-036
Identities = 200/240 (83%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||||||||| |||||| |||||||| | ||| ||| || | | ||||||||| ||
Sbjct: 19 gtaccagcaggg--cgttcgccggcggcaccgggcttcgcctgccaagggacctcgccga 76
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||||||||| ||||||||||| |||||||||||||| | ||||| ||| |
Sbjct: 77 gaacaaccgcggcgcgcgcgtgctggtggtctgctccgagatcaccgcggtcaccttctg 136
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|||||| |||||| |||||||||||||| ||||| |||||||| ||||||||||| ||
Sbjct: 137 cggcccgcacgagtcccacctcgactcgctggtgggtcaggcgctcttcggcgacggtgc 196
Query: 192 ggcggccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccagct 251
|| |||||| |||| || || ||||| || || |||||||||||| || ||||||||
Sbjct: 197 agccgccgtgatcgtcggtgcggaccccgatgagtccgtcgagcgccccctattccagct 256
>gb|BJ251623.1|BJ251623 BJ251623 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf1o20 3', mRNA sequence
Length = 712
Score = 137 bits (69), Expect = 4e-031
Identities = 121/140 (86%)
Strand = Plus / Minus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatc 114
|||||||||||| | |||||||||| ||||||||| ||||| || || ||||||||||||
Sbjct: 694 gccaaggacctcnccgagaacaaccncggcgcgcgcgtgctngtcgtntgctccgagatc 635
Query: 115 acggncgtcacgttccgcggcccctccgagtcgcacctcgactcgctcgtgggccaggcg 174
|| | |||||| ||||||||||| |||||| ||||||||||| ||||| |||||||||
Sbjct: 634 accgccgtcaccttccgcggcccgcacgagtcccacctcgactccctcgtcggccaggcg 575
Query: 175 ctgttcggcgacggcgcggc 194
|| |||||||| || |||||
Sbjct: 574 ctcttcggcgatggtgcggc 555
>gb|BQ620656.1|BQ620656 TaLr1135H07R TaLr1 Triticum aestivum cDNA clone TaLr1135H07R, mRNA
sequence
Length = 457
Score = 137 bits (69), Expect = 4e-031
Identities = 176/212 (83%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||| ||||| || ||||| |||||||| ||||| ||| | |||||||||||||| ||
Sbjct: 167 gtaccaccagggctgcttcgccggcggcaccgtgctccgcctcgccaaggacctcgccga 226
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||||||||| ||||| || || |||||||||||||| | |||||| |||||
Sbjct: 227 gaacaaccgcggcgcgcgcgtgctcgtcgtctgctccgagatcaccgtcgtcaccttccg 286
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|||||| ||||| ||||||||||| |||| | ||||||||| ||| |||| || ||
Sbjct: 287 cggcccgcacgagttccacctcgactccatcgtcgaccaggcgctcttctgcgatggtgc 346
Query: 192 ggcggccgtggtcgtgggcgccgacccggacg 223
|| || ||| || | ||||||||||| ||||
Sbjct: 347 ggtcgcggtgatcatcggcgccgaccccgacg 378
>gb|AY286095.1| Triticum aestivum cultivar Chinese Spring chalcone synthase (CHS)
gene, complete cds
Length = 1279
Score = 131 bits (66), Expect = 2e-029
Identities = 191/233 (81%)
Strand = Plus / Plus
Query: 16 cagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcggagaac 75
|||||||| || ||||| |||||||||||||| ||| | ||||| ||||| || ||||||
Sbjct: 584 cagcagggctgcttcgccggcggcacggtgcttcgcctagccaaagaccttgctgagaac 643
Query: 76 aaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccgcggc 135
||||||||||| || ||||||||||| |||||||||||||| | || || |||||||||
Sbjct: 644 aaccgcggcgcacgtgtgctggtggtctgctccgagatcaccgcggtgaccttccgcggc 703
Query: 136 ccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgcggcg 195
|| ||||| ||||||||||| || || || |||||||| ||||||||||| || ||
Sbjct: 704 ccgcatgagtcccacctcgactcactggtaggtcaggcgctcttcggcgacggtgcagcc 763
Query: 196 gccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttcca 248
|| ||| || | ||||| ||||| |||| |||||||||||| || |||||
Sbjct: 764 gcggtgatcatcggcgcagaccccgacgtgtccgtcgagcgccccctgttcca 816
>gb|BQ620775.1|BQ620775 TaLr1174B04R TaLr1 Triticum aestivum cDNA clone TaLr1174B04R, mRNA
sequence
Length = 595
Score = 129 bits (65), Expect = 1e-028
Identities = 95/105 (90%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||||||||| || ||||| |||||||| ||||| ||| | |||||||||||||| ||
Sbjct: 490 gtaccagcagggctgcttcgccggcggcaccgtgcttcgcctcgccaaggacctcgccga 549
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcac 116
|||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 550 gaacaaccgcggcgcgcgcgtgctggtggtctgctccgagatcac 594
>gb|AY286093.1| Triticum aestivum chalcone synthase (CHS) gene, complete cds
Length = 1394
Score = 121 bits (61), Expect = 2e-026
Identities = 192/236 (81%)
Strand = Plus / Plus
Query: 16 cagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcggagaac 75
|||||||| || || || |||||||||||||| ||| | ||||| ||||| || ||||||
Sbjct: 699 cagcagggctgctttgccggcggcacggtgcttcgcctagccaaagaccttgctgagaac 758
Query: 76 aaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccgcggc 135
||||| ||||| || ||||||||||| |||||||||||||| | || || ||||| |||
Sbjct: 759 aaccgtggcgcacgtgtgctggtggtctgctccgagatcaccgcggtgaccttccgtggc 818
Query: 136 ccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgcggcg 195
|| |||||| |||||||||||||| || || |||||||| |||||||| || || ||
Sbjct: 819 ccgcacgagtcccacctcgactcgctggtaggtcaggcgctcttcggcgatggtgcagcc 878
Query: 196 gccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccagct 251
|| ||| || | ||||| ||||| ||||| | |||||||||| || ||||||||
Sbjct: 879 gcggtgatcatcggcgcggaccccgacgagtccatcgagcgccccctgttccagct 934
>gb|AY286096.1| Triticum aestivum chalcone synthase gene, complete cds
Length = 1283
Score = 121 bits (61), Expect = 2e-026
Identities = 192/236 (81%)
Strand = Plus / Plus
Query: 16 cagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcggagaac 75
|||||||| || || || |||||||||||||| ||| | ||||| ||||| || ||||||
Sbjct: 588 cagcagggctgctttgccggcggcacggtgcttcgcctagccaaagaccttgctgagaac 647
Query: 76 aaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccgcggc 135
|||||||||||||| ||||||||||| ||||| |||||||| | || || ||||| |||
Sbjct: 648 aaccgcggcgcgcgcgtgctggtggtctgctcggagatcaccgcggtgaccttccgtggc 707
Query: 136 ccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgcggcg 195
|| |||||| |||||||||||||| || || ||||| || |||||||| || || ||
Sbjct: 708 ccgcacgagtcccacctcgactcgctggtaggtcaggcactcttcggcgatggtgcagcc 767
Query: 196 gccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccagct 251
|| ||| || | ||||| ||||| ||||| | |||||||||| || ||||||||
Sbjct: 768 gcggtgatcatcggcgcagaccccgacgagtccatcgagcgccccctgttccagct 823
>gb|AY286097.1| Triticum aestivum chalcone synthase (CHS) mRNA, complete cds
Length = 1185
Score = 121 bits (61), Expect = 2e-026
Identities = 192/236 (81%)
Strand = Plus / Plus
Query: 16 cagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcggagaac 75
|||||||| || || || |||||||||||||| ||| | ||||| ||||| || ||||||
Sbjct: 490 cagcagggctgctttgccggcggcacggtgcttcgcctagccaaagaccttgctgagaac 549
Query: 76 aaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccgcggc 135
|||||||||||||| ||||||||||| ||||| |||||||| | || || ||||| |||
Sbjct: 550 aaccgcggcgcgcgcgtgctggtggtctgctcggagatcaccgcggtgaccttccgtggc 609
Query: 136 ccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgcggcg 195
|| |||||| |||||||||||||| || || ||||| || |||||||| || || ||
Sbjct: 610 ccgcacgagtcccacctcgactcgctggtaggtcaggcactcttcggcgatggtgcagcc 669
Query: 196 gccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccagct 251
|| ||| || | ||||| ||||| ||||| | |||||||||| || ||||||||
Sbjct: 670 gcggtgatcatcggcgcagaccccgacgagtccatcgagcgccccctgttccagct 725
>gb|DR738384.1|DR738384 FGAS083601 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1037
Score = 113 bits (57), Expect = 6e-024
Identities = 90/101 (89%)
Strand = Plus / Plus
Query: 16 cagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcggagaac 75
|||||||| || ||||| |||||||||||||| ||| ||||||| ||||| || ||||||
Sbjct: 669 cagcagggctgcttcgctggcggcacggtgcttcgcctggccaaagaccttgctgagaac 728
Query: 76 aaccgcggcgcgcgggtgctggtggtgtgctccgagatcac 116
|||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 729 aaccgcggcgcgcgcgtgctggtggtctgctcggagatcac 769
>gb|AY286098.1| Triticum aestivum chalcone synthase (CHS1) mRNA, complete cds
Length = 1185
Score = 113 bits (57), Expect = 6e-024
Identities = 191/236 (80%)
Strand = Plus / Plus
Query: 16 cagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcggagaac 75
|||||||| || || || |||||||||||||| ||| | ||||| ||||| | ||||||
Sbjct: 490 cagcagggctgctttgccggcggcacggtgcttcgcctagccaaagaccttgttgagaac 549
Query: 76 aaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccgcggc 135
||||| ||||| || ||||||||||| |||||||||||||| | || || ||||| |||
Sbjct: 550 aaccgtggcgcacgtgtgctggtggtctgctccgagatcaccgcggtgaccttccgtggc 609
Query: 136 ccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgcggcg 195
|| |||||| |||||||||||||| || || |||||||| |||||||| || || ||
Sbjct: 610 ccgcacgagtcccacctcgactcgctggtaggtcaggcgctcttcggcgatggtgcagcc 669
Query: 196 gccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccagct 251
|| ||| || | ||||| ||||| ||||| | |||||||||| || ||||||||
Sbjct: 670 gcggtgatcatcggcgcggaccccgacgagtccatcgagcgccccctgttccagct 725
>gb|CV764631.1|CV764631 FGAS059016 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 851
Score = 103 bits (52), Expect = 6e-021
Identities = 133/155 (85%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 34 ggcggcacggtgctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcgggtg 93
|||||||| ||||| ||| | |||||||||||||| ||||||| |||||||||||| |||
Sbjct: 700 ggcggcaccgtgcttcgccttgccaaggacctcgccgagaaca-ccgcggcgcgcgcgtg 758
Query: 94 ctggtggtgtgctccgagatcacggncgtcacgttccgcggcccctccgagtcgcacctc 153
|||||||| |||||||||||||| | ||||| || |||||||| |||||| || |||
Sbjct: 759 ctggtggtctgctccgagatcaccgcggtcacctt-cgcggcccgcacgagtccca-ctc 816
Query: 154 gactcgctcgtgggccaggcgctgttcggcgacgg 188
|||||||| ||||| || ||||| |||||||||||
Sbjct: 817 gactcgctggtggggca-gcgctcttcggcgacgg 850
>gb|AL827771.1|AL827771 AL827771 p:739 Triticum aestivum cDNA clone B06_p739_plate_10, mRNA
sequence
Length = 317
Score = 97.6 bits (49), Expect = 3e-019
Identities = 91/105 (86%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||||| ||| || ||||| |||||||| ||||| ||| | ||| |||||||||| ||
Sbjct: 211 gtaccagccgggctgcttcgccggcggcaccgtgctccgcctcgccgaggacctcgccga 270
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcac 116
|||||||||||||||||| ||||| || || ||||||||||||||
Sbjct: 271 gaacaaccgcggcgcgcgcgtgctcgtcgtctgctccgagatcac 315
>gb|DR740814.1|DR740814 FGAS000747 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1118
Score = 97.6 bits (49), Expect = 3e-019
Identities = 91/105 (86%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||| || || || || |||||||||||||| ||||||||||||||||| || ||
Sbjct: 563 gtaccagcaaggctgctttgctggcggcacggtgctccgcgtggccaaggaccttgcaga 622
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcac 116
||||||||| |||||||| ||||| || || ||||| ||||||||
Sbjct: 623 gaacaaccgtggcgcgcgtgtgctcgtcgtctgctcagagatcac 667
Score = 44.1 bits (22), Expect = 0.004
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 166 ggccaggcgctgttcggcgacggcgcggcggccgtggtcgtgggcgccgacccggacg 223
|||||||| || || ||||| || || || ||||||||||||||||| ||||| ||||
Sbjct: 718 ggccaggcactctttggcgatggggcagctgccgtggtcgtgggcgctgaccccgacg 775
>dbj|AB187025.1| Triticum aestivum CHS gene for chalcone synthase, partial cds
Length = 434
Score = 97.6 bits (49), Expect = 3e-019
Identities = 91/105 (86%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||| || || || || |||||||||||||| ||||||||||||||||| || ||
Sbjct: 108 gtaccagcaaggctgctttgctggcggcacggtgctccgcgtggccaaggaccttgcaga 167
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcac 116
||||||||| |||||||| ||||| || || ||||| ||||||||
Sbjct: 168 gaacaaccgtggcgcgcgtgtgctcgtcgtctgctcagagatcac 212
Score = 44.1 bits (22), Expect = 0.004
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 166 ggccaggcgctgttcggcgacggcgcggcggccgtggtcgtgggcgccgacccggacg 223
|||||||| || || ||||| || || || ||||||||||||||||| ||||| ||||
Sbjct: 262 ggccaggcactctttggcgatggggcagctgccgtggtcgtgggcgctgaccccgacg 319
>gb|CA687970.1|CA687970 wlm96.pk040.e5 wlm96 Triticum aestivum cDNA clone wlm96.pk040.e5 5'
end, mRNA sequence
Length = 511
Score = 93.7 bits (47), Expect = 5e-018
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 34 ggcggcacggtgctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcgggtg 93
|||||||||||||| ||||||||||||||||| || ||||||||||| |||||||| |||
Sbjct: 155 ggcggcacggtgctccgcgtggccaaggaccttgcagagaacaaccgtggcgcgcgtgtg 214
Query: 94 ctggtggtgtgctccgagatcac 116
|| || || ||||| ||||||||
Sbjct: 215 ctcgtcgtctgctcagagatcac 237
Score = 44.1 bits (22), Expect = 0.004
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 166 ggccaggcgctgttcggcgacggcgcggcggccgtggtcgtgggcgccgacccggacg 223
|||||||| || || ||||| || || || ||||||||||||||||| ||||| ||||
Sbjct: 287 ggccaggcactctttggcgatggggcagctgccgtggtcgtgggcgctgaccccgacg 344
>gb|CL901791.1|CL901791 CSHC1166 1639HC library Triticum aestivum genomic clone
1639HC06H18, DNA sequence
Length = 322
Score = 87.7 bits (44), Expect = 3e-016
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 141 cgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgcggcggccgt 200
|||||| |||||||||| ||| || ||||||| ||| ||||||||||||||||| |||||
Sbjct: 105 cgagtcccacctcgacttgctggtaggccaggtgctcttcggcgacggcgcggcagccgt 164
Query: 201 ggtcgtgggcgccgacccggacga 224
||||||||| || ||||| |||||
Sbjct: 165 ggtcgtgggggcggaccccgacga 188
>gb|CK211284.1|CK211284 FGAS023119 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1095
Score = 81.8 bits (41), Expect = 2e-014
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 28 ttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcg 87
||||| |||||||||||||| ||| ||||||| ||||| | |||||||||| |||||||
Sbjct: 923 ttcgctggcggcacggtgcttcgcctggccaaagaccttgttgagaacaaccccggcgcg 864
Query: 88 cgggtgctggtggtgtgctccgagatcac 116
|| ||||||||| | ||||| ||||||||
Sbjct: 863 cgcgtgctggtgttctgctcggagatcac 835
>gb|AF142566.1|AF142566 Triticum aestivum chalcone synthase gene, partial cds
Length = 669
Score = 75.8 bits (38), Expect = 1e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 43 gtgctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtggtg 102
||||| ||| ||||||| ||| |||| ||||||||||||||||| || |||||||||||
Sbjct: 40 gtgctccgcatggccaaagacatcgccgagaacaaccgcggcgcacgcgtgctggtggtc 99
Query: 103 tgctccgagatcac 116
||||| ||||||||
Sbjct: 100 tgctcggagatcac 113
>gb|BT009410.1| Triticum aestivum clone wlm96.pk061.i14:fis, full insert mRNA
sequence
Length = 1317
Score = 71.9 bits (36), Expect = 2e-011
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 45 gctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtggtgtg 104
||||||| | |||||||||||||| |||||||||||||||||||| || || ||||| ||
Sbjct: 495 gctgcgcctcgccaaggacctcgccgagaacaaccgcggcgcgcgcgtcctcgtggtctg 554
Query: 105 ctccgagatcac 116
| ||||| ||||
Sbjct: 555 cgccgagctcac 566
Score = 56.0 bits (28), Expect = 1e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 168 ccaggcgctgttcggcgacggcgcggcggccgtggtcgtgggcgccgacccg 219
||||| ||| |||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 618 ccaggggctcttcggcgacggcgcgggcgccgtcgtcgtcggcgccgacccg 669
>gb|CA732600.1|CA732600 wlp1c.pk004.h5 wlp1c Triticum aestivum cDNA clone wlp1c.pk004.h5 5'
end, mRNA sequence
Length = 614
Score = 67.9 bits (34), Expect = 3e-010
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtgg 100
||||||||||| || |||||||||||||||||||| ||||||||||
Sbjct: 195 gccaaggacctggccgagaacaaccgcggcgcgcgcgtgctggtgg 240
>gb|CK204212.1|CK204212 FGAS012748 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 851
Score = 67.9 bits (34), Expect = 3e-010
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||| || || ||||| |||||||| ||||| || | ||||| | ||||| ||
Sbjct: 750 gtaccagcaaggctgcttcgccggcggcaccgtgctccgnctcgccaaaggactcgccga 809
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgaga 112
|||||||||||||||||| ||||| || || ||||||||||
Sbjct: 810 gaacaaccgcggcgcgcgcgtgctcgtcgtctgctccgaga 850
>gb|BQ743464.1|BQ743464 WHE4104_C08_F16ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4104_C08_F16, mRNA sequence
Length = 712
Score = 65.9 bits (33), Expect = 1e-009
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 45 gctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcg 89
||||||| | |||||||||||||| ||||||||||||||||||||
Sbjct: 624 gctgcgcctcgccaaggacctcgccgagaacaaccgcggcgcgcg 668
>gb|CA700759.1|CA700759 wkm1c.pk006.c13 wkm1c Triticum aestivum cDNA clone wkm1c.pk006.c13
5' end, mRNA sequence
Length = 537
Score = 65.9 bits (33), Expect = 1e-009
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 45 gctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcg 89
||||||| | |||||||||||||| ||||||||||||||||||||
Sbjct: 349 gctgcgcctcgccaaggacctcgccgagaacaaccgcggcgcgcg 393
>gb|CV763535.1|CV763535 FGAS057924 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 852
Score = 65.9 bits (33), Expect = 1e-009
Identities = 87/105 (82%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||| || || || || |||||||||||||| ||||||| | ||||||| || ||
Sbjct: 666 gtaccagcaaggctgctttgctggcggcacggtgctccgcgtgggccaggaccttgcaga 725
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcac 116
||||| | | |||||||| ||||| || || ||||| ||||||||
Sbjct: 726 gaacaccgggggcgcgcgtgtgctcgtcgtctgctcagagatcac 770
>gb|CV775261.1|CV775261 FGAS069664 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 833
Score = 65.9 bits (33), Expect = 1e-009
Identities = 89/105 (84%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||| || || || || |||||||||||||| |||||||||||||| || || ||
Sbjct: 656 gtaccagcaaggctgctttgctggcggcacggtgctccgcgtggccaagga-cttgcaga 714
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcac 116
|||| |||| |||||||| ||||| || || ||||| ||||||||
Sbjct: 715 gaac-accgtggcgcgcgtgtgctcgtcgtctgctcagagatcac 758
>gb|BG604814.1|BG604814 WHE0943_E09_J17ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0943_E09_J17, mRNA sequence
Length = 504
Score = 63.9 bits (32), Expect = 5e-009
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 46 ctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcg 89
|||||| | |||||||||||||| ||||||||||||||||||||
Sbjct: 380 ctgcgcctagccaaggacctcgccgagaacaaccgcggcgcgcg 423
>gb|CD892534.1|CD892534 G118.121E01F010725 G118 Triticum aestivum cDNA clone G118121E01,
mRNA sequence
Length = 512
Score = 63.9 bits (32), Expect = 5e-009
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 46 ctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcg 89
|||||| | |||||||||||||| ||||||||||||||||||||
Sbjct: 160 ctgcgcctagccaaggacctcgccgagaacaaccgcggcgcgcg 203
Score = 40.1 bits (20), Expect = 0.069
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 168 ccaggcgctgttcggcgacggcgcggcggccgtggtcgtgggcgccgacccggacg 223
||||| ||| ||||| |||||||| | ||||| |||||||||||||||| ||||
Sbjct: 285 ccaggggctcttcggtgacggcgccggtgccgtcatcgtgggcgccgaccctgacg 340
>gb|CD899597.1|CD899597 G174.112O22F010824 G174 Triticum aestivum cDNA clone G174112O22,
mRNA sequence
Length = 754
Score = 63.9 bits (32), Expect = 5e-009
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 46 ctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcg 89
|||||| | |||||||||||||| ||||||||||||||||||||
Sbjct: 544 ctgcgcctagccaaggacctcgccgagaacaaccgcggcgcgcg 587
>gb|CD935926.1|CD935926 OV.102N20F010202 OV Triticum aestivum cDNA clone OV102N20, mRNA
sequence
Length = 666
Score = 63.9 bits (32), Expect = 5e-009
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 46 ctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcg 89
|||||| | |||||||||||||| ||||||||||||||||||||
Sbjct: 574 ctgcgcctagccaaggacctcgccgagaacaaccgcggcgcgcg 617
>gb|DR735687.1|DR735687 FGAS081321 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1101
Score = 63.9 bits (32), Expect = 5e-009
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 45 gctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtgg 100
||||||| | ||||||||||| || ||||||||||| |||||||| ||||||||||
Sbjct: 596 gctgcgccttgccaaggacctggccgagaacaaccgtggcgcgcgtgtgctggtgg 651
>gb|BT009068.1| Triticum aestivum clone wfl1c.pk001.k16:fis, full insert mRNA
sequence
Length = 1540
Score = 63.9 bits (32), Expect = 5e-009
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 45 gctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtgg 100
||||||| ||||||||||||| || ||||||||||||||||| || || |||||||
Sbjct: 628 gctgcgcctggccaaggacctggccgagaacaaccgcggcgcacgcgtcctggtgg 683
Score = 38.2 bits (19), Expect = 0.27
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 228 cgtcgagcgcccgctcttc 246
|||||||||||||||||||
Sbjct: 811 cgtcgagcgcccgctcttc 829
>gb|CK209559.1|CK209559 FGAS021329 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1085
Score = 61.9 bits (31), Expect = 2e-008
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatc 114
|||| ||| ||||| |||||||||||||||||||| || ||||||| ||| ||||||||
Sbjct: 350 gccagggagctcgccgagaacaaccgcggcgcgcgcgtcctggtggcctgcgccgagatc 409
Query: 115 acg 117
|||
Sbjct: 410 acg 412
Score = 40.1 bits (20), Expect = 0.069
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 160 ctcgtgggccaggcgctgttcggcgacggcgc 191
||||| ||||| ||||||||||| ||||||||
Sbjct: 446 ctcgtcggccacgcgctgttcggggacggcgc 477
>gb|CV779002.1|CV779002 FGAS073411 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 807
Score = 58.0 bits (29), Expect = 3e-007
Identities = 71/84 (84%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||||||||| || ||||| |||||||||||||| ||| ||| ||||| |||| ||
Sbjct: 723 gtaccagcagggctgcttcgccggcggcacggtgctccgcctgg-caagggactcgncga 781
Query: 72 gaacaaccgcggcgcgcgggtgct 95
||| ||||||||||||| |||||
Sbjct: 782 gaaacaccgcggcgcgcgcgtgct 805
>gb|BF473448.1|BF473448 WHE0924_E09_J18ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0924_E09_J18, mRNA sequence
Length = 613
Score = 56.0 bits (28), Expect = 1e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 46 ctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcg 89
|||||| | |||||||||||||| |||||||||||||| |||||
Sbjct: 520 ctgcgcttagccaaggacctcgccgagaacaaccgcggtgcgcg 563
>gb|BG262789.1|BG262789 WHE0945_C07_E13ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0945_C07_E13, mRNA sequence
Length = 552
Score = 56.0 bits (28), Expect = 1e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 46 ctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcg 89
|||||| | |||||||||||||| |||||||||||||| |||||
Sbjct: 418 ctgcgcttagccaaggacctcgccgagaacaaccgcggtgcgcg 461
>gb|CA704686.1|CA704686 wdk1c.pk013.n9 wdk1c Triticum aestivum cDNA clone wdk1c.pk013.n9 5'
end, mRNA sequence
Length = 472
Score = 54.0 bits (27), Expect = 5e-006
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcg 89
|||||||||||||| |||||||||||||| |||||
Sbjct: 322 gccaaggacctcgccgagaacaaccgcggtgcgcg 356
>gb|CA729185.1|CA729185 wdi1c.pk007.o12 wdi1c Triticum aestivum cDNA clone wdi1c.pk007.o12
5' end, mRNA sequence
Length = 614
Score = 54.0 bits (27), Expect = 5e-006
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcg 89
||||||||||| || ||||||||||||||||||||
Sbjct: 230 gccaaggacctggccgagaacaaccgcggcgcgcg 264
>gb|CK163042.1|CK163042 FGAS015656 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1024
Score = 54.0 bits (27), Expect = 5e-006
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcg 89
||||| |||||||| ||||||||||||||||||||
Sbjct: 687 gccaaagacctcgccgagaacaaccgcggcgcgcg 721
>gb|CK163413.1|CK163413 FGAS016040 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1114
Score = 54.0 bits (27), Expect = 5e-006
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcg 89
||||| |||||||| ||||||||||||||||||||
Sbjct: 697 gccaaagacctcgccgagaacaaccgcggcgcgcg 731
>gb|CA713174.1|CA713174 wdk3c.pk011.a6 wdk3c Triticum aestivum cDNA clone wdk3c.pk011.a6 5'
end, mRNA sequence
Length = 449
Score = 50.1 bits (25), Expect = 7e-005
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 64 ctcgcggagaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcac 116
||||| |||||||||||||||||||| || || |||| ||| ||||||||||
Sbjct: 38 ctcgccgagaacaaccgcggcgcgcgcgtcctcgtggcctgcgccgagatcac 90
>gb|AJ603637.1|AJ603637 AJ603637 T07 Triticum aestivum cDNA clone B03_T07_plate_15, mRNA
sequence
Length = 282
Score = 48.1 bits (24), Expect = 3e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 168 ccaggcgctgttcggcgacggcgcggcggccgtggtcgtgggcgccgacccggacg 223
||||||||| || ||||| |||||||| || ||| |||| ||||||||||| ||||
Sbjct: 1 ccaggcgctctttggcgatggcgcggccgcggtgatcgtcggcgccgaccccgacg 56
>gb|DR738535.1|DR738535 FGAS083752 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1140
Score = 48.1 bits (24), Expect = 3e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcgg 90
|||||||| ||||| |||||||||||||| ||||||
Sbjct: 661 gccaaggagctcgccgagaacaaccgcggggcgcgg 696
>gb|BQ789335.1|BQ789335 WHE4160_C01_E02ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4160_C01_E02, mRNA sequence
Length = 681
Score = 46.1 bits (23), Expect = 0.001
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 46 ctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtgg 100
|||||| | ||||||||| | || |||||||||||||| ||||| ||||| ||||
Sbjct: 620 ctgcgcctcgccaaggacatggctgagaacaaccgcggggcgcgcgtgcttgtgg 674
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 97,651
Number of Sequences: 636343
Number of extensions: 97651
Number of successful extensions: 30934
Number of sequences better than 0.5: 90
Number of HSP's better than 0.5 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30789
Number of HSP's gapped (non-prelim): 139
length of query: 252
length of database: 367,240,239
effective HSP length: 18
effective length of query: 234
effective length of database: 355,786,065
effective search space: 83253939210
effective search space used: 83253939210
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)