BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3802485.2.1
(1118 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ225356.1|BJ225356 BJ225356 Y. Ogihara unpublished cDNA... 323 1e-086
gb|CA632658.1|CA632658 wle1n.pk0060.e3 wle1n Triticum aesti... 307 9e-082
gb|BQ606688.1|BQ606688 BRY_2556 wheat EST endosperm library... 295 3e-078
gb|BE414222.1|BE414222 SCU007.E09.R990714 ITEC SCU Wheat En... 283 1e-074
gb|CV770478.1|CV770478 FGAS064871 Triticum aestivum FGAS: L... 262 5e-068
gb|CD888949.1|CD888949 G118.110J24F010723 G118 Triticum aes... 258 7e-067
gb|BF484250.1|BF484250 WHE2321_A08_A15ZS Wheat pre-anthesis... 252 5e-065
gb|AL808299.1|AL808299 AL808299 a:22 Triticum aestivum cDNA... 212 4e-053
gb|CA635069.1|CA635069 wle1n.pk0092.g5 wle1n Triticum aesti... 204 9e-051
gb|CK161519.1|CK161519 FGAS014090 Triticum aestivum FGAS: L... 194 9e-048
gb|CV774703.1|CV774703 FGAS069103 Triticum aestivum FGAS: L... 192 4e-047
gb|CD908752.1|CD908752 G468.110N17F010817 G468 Triticum aes... 172 3e-041
gb|CN011109.1|CN011109 WHE3880_A07_A14ZS Wheat Fusarium gra... 163 3e-038
gb|BJ302416.1|BJ302416 BJ302416 Y. Ogihara unpublished cDNA... 151 1e-034
gb|CV758871.1|CV758871 FGAS053253 Triticum aestivum FGAS: L... 151 1e-034
gb|CV759849.1|CV759849 FGAS054233 Triticum aestivum FGAS: L... 151 1e-034
gb|CV764917.1|CV764917 FGAS059302 Triticum aestivum FGAS: L... 151 1e-034
gb|CA640432.1|CA640432 wre1n.pk0035.a5 wre1n Triticum aesti... 145 8e-033
gb|CV759230.1|CV759230 FGAS053613 Triticum aestivum FGAS: L... 143 3e-032
gb|BG607395.1|BG607395 WHE2479_B10_C19ZS Triticum monococcu... 137 2e-030
gb|BE415007.1|BE415007 MWL010.D11F990629 ITEC MWL Wheat Roo... 123 3e-026
gb|BQ842761.1|BQ842761 WHE2998_A08_B16ZS Wheat dormant embr... 123 3e-026
gb|CK206351.1|CK206351 FGAS017940 Triticum aestivum FGAS: L... 111 1e-022
gb|CD939767.1|CD939767 OV.114P02F010312 OV Triticum aestivu... 105 7e-021
gb|BQ901971.1|BQ901971 Ta02_10e10_R Ta02_AAFC_ECORC_Fusariu... 70 4e-010
gb|CA502262.1|CA502262 WHE4045_A09_A17ZT Wheat meiotic anth... 60 3e-007
gb|CD910359.1|CD910359 G550.001B10F010301 G550 Triticum aes... 56 5e-006
gb|BJ230169.1|BJ230169 BJ230169 Y. Ogihara unpublished cDNA... 52 8e-005
gb|CN008535.1|CN008535 WHE2642_C11_E22ZE Wheat Fusarium gra... 52 8e-005
gb|CA713189.1|CA713189 wdk3c.pk011.i21 wdk3c Triticum aesti... 48 0.001
gb|CA731160.1|CA731160 wip1c.pk007.n13 wip1c Triticum aesti... 44 0.021
gb|BE213632.1|BE213632 EST0322 Triticum aestivum Lambda Zap... 40 0.32
gb|BE216954.1|BE216954 EST0497 Triticum aestivum Lambda Zap... 40 0.32
gb|BG904776.1|BG904776 TaLr1134G10F TaLr1 Triticum aestivum... 40 0.32
gb|BJ251375.1|BJ251375 BJ251375 Y. Ogihara unpublished cDNA... 40 0.32
gb|DN551591.1|DN551591 TaBs109D10 Triticum aestivum SSH cDN... 40 0.32
>gb|BJ225356.1|BJ225356 BJ225356 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl21k19 5', mRNA sequence
Length = 657
Score = 323 bits (163), Expect = 1e-086
Identities = 382/455 (83%)
Strand = Plus / Plus
Query: 104 tgggcaaagatgttcaaggaatcaacagtgtctaagatggttgacatcccactgtgccat 163
||||| |||||||||||||| ||| | || | ||||||||||| | || ||| ||||
Sbjct: 25 tgggcgaagatgttcaaggagtcacccatgcccaagatggttgatgtaccgttgtcccat 84
Query: 164 attcctgaggctgtcatcaagactgcgagtgattggatcagtcaaagatcttctgatgcc 223
|||||||| | || ||||||||| |||||||||||||| || |||||| |||||||
Sbjct: 85 gttcctgagccagtttgcaagactgcaagtgattggatcagccagagatctcctgatgca 144
Query: 224 ctgggagactttgttttgtggtgtatagatagcatcatgtctgaattgtcaggtccatca 283
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 145 ttgggagaatttgttttgtggtgtatagatagcatcatgtcggaattgtcaggtccaact 204
Query: 284 gctggccctaagggttcaaagaaggttgcacaacagtctccaagggcccaggttgcaatc 343
| ||| |||||||| | |||||||||| ||||| |||||| ||||||||||||||
Sbjct: 205 gttggacctaagggcgcgaagaaggttgttcaacaaactccaaaagcccaggttgcaata 264
Query: 344 tttgttgttcttgccatgactttaagaagaaagcctgatgtactggtaaatgttatgcca 403
|||||||| |||||| ||||||||||||| ||||| |||||||| |||| | |||
Sbjct: 265 tttgttgtgcttgccttgactttaagaaggaagccagatgtactaataaacctctcccca 324
Query: 404 aagataatgggaaacaataaatatctgggacaggaaaagcttcccatcattgtctgggtt 463
|| ||| |||| |||| ||||||||| ||||||||||||||||||||||| | |||||||
Sbjct: 325 aaaatagtggggaacagtaaatatcttggacaggaaaagcttcccatcatcgcctgggtt 384
Query: 464 attgctcaggcctctcaaggtgacctagtgtctggcatgttttgctgggctcattctcta 523
||| |||||| |||||||| |||||||| || || ||||||| |||| ||||||| |||
Sbjct: 385 attaatcaggcatctcaaggcgacctagtctcgggaatgttttcctggtctcattcccta 444
Query: 524 tttcccacattatgtgcgaagtcaagtgggaatcc 558
||||||||| | ||||| |||||||||||||||||
Sbjct: 445 tttcccacagtttgtgcaaagtcaagtgggaatcc 479
>gb|CA632658.1|CA632658 wle1n.pk0060.e3 wle1n Triticum aestivum cDNA clone wle1n.pk0060.e3
5' end, mRNA sequence
Length = 468
Score = 307 bits (155), Expect = 9e-082
Identities = 324/379 (85%), Gaps = 1/379 (0%)
Strand = Plus / Plus
Query: 181 caagactgcgagtgattggatcagtcaaagatcttctgatgccctgggagactttgtttt 240
||||||||| |||||||||||||| || |||||| ||||||| ||||||| ||||||||
Sbjct: 60 caagactgcaagtgattggatcagccagagatctcctgatgcattgggagaatttgtttt 119
Query: 241 gtggtgtatagatagcatcatgtctgaattgtcaggtccatcagctggccctaagggttc 300
|||||||||||||||||||||||| ||||||||||||||| | | ||| |||||||| |
Sbjct: 120 gtggtgtatagatagcatcatgtcggaattgtcaggtccaactgttggacctaagggcgc 179
Query: 301 aaagaaggttgcacaacagtctccaagggcccaggttgcaatctttgttgttcttgccat 360
|||||||||| ||||| |||||| |||||||||||||| |||||||| |||||| |
Sbjct: 180 gaagaaggttgttcaacaaactccaaaagcccaggttgcaatatttgttgtgcttgcctt 239
Query: 361 gactttaagaagaaagcctgatgtactggtaaatgttatgccaaagataatgggaaacaa 420
|||||||||||| ||||| |||||||| |||| | ||||| ||| |||| ||||
Sbjct: 240 gactttaagaaggaagccagatgtactaataaacctctccccaaaaatagtggggaacag 299
Query: 421 taaatatctgggacaggaaaagcttcccatcattgtctgggttattgctcaggcctctca 480
||||||||| ||||||||||||||||||||||| | |||||||||| |||||| |||||
Sbjct: 300 taaatatcttggacaggaaaagcttcccatcatcgcctgggttattaatcaggcatctca 359
Query: 481 aggtgacctagtgtctggcatgttttgctggg-ctcattctctatttcccacattatgtg 539
||| |||||||| || || ||||||| ||||| ||||||| ||| |||||||| | ||||
Sbjct: 360 aggcgacctagtctcgggaatgttttcctgggtctcattccctaattcccacagtttgtg 419
Query: 540 cgaagtcaagtgggaatcc 558
| |||||||||||||||||
Sbjct: 420 caaagtcaagtgggaatcc 438
>gb|BQ606688.1|BQ606688 BRY_2556 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 567
Score = 295 bits (149), Expect = 3e-078
Identities = 401/485 (82%)
Strand = Plus / Plus
Query: 104 tgggcaaagatgttcaaggaatcaacagtgtctaagatggttgacatcccactgtgccat 163
||||| |||||||||||||| ||| | || | ||||||||||| | ||| ||| ||||
Sbjct: 82 tgggccaagatgttcaaggagtcacccatgcccaagatggttgatgtaccattgtcccat 141
Query: 164 attcctgaggctgtcatcaagactgcgagtgattggatcagtcaaagatcttctgatgcc 223
|||||||| | || ||||||||| |||||||||||||| || |||||| |||||||
Sbjct: 142 gttcctgagccagtttgcaagactgcaagtgattggatcagccagagatctcctgatgca 201
Query: 224 ctgggagactttgttttgtggtgtatagatagcatcatgtctgaattgtcaggtccatca 283
||||||| |||||||||||||||||||||||||||||||| || |||||||||||| |
Sbjct: 202 ttgggagaatttgttttgtggtgtatagatagcatcatgtcggagttgtcaggtccaact 261
Query: 284 gctggccctaagggttcaaagaaggttgcacaacagtctccaagggcccaggttgcaatc 343
| ||| |||||||| | |||||||||| ||||| |||||| ||||||||||||||
Sbjct: 262 gttggacctaagggcgcgaagaaggttgttcaacaaactccaaaagcccaggttgcaata 321
Query: 344 tttgttgttcttgccatgactttaagaagaaagcctgatgtactggtaaatgttatgcca 403
|||||||| |||||| ||||||||||||| ||||| |||||||| |||| | ||
Sbjct: 322 tttgttgtgcttgccttgactttaagaaggaagccagatgtactaataaacctctccccc 381
Query: 404 aagataatgggaaacaataaatatctgggacaggaaaagcttcccatcattgtctgggtt 463
|| ||| |||| |||| ||||||||| ||||||||||||||||||||||| | |||||||
Sbjct: 382 aaaatagtggggaacagtaaatatcttggacaggaaaagcttcccatcatcgcctgggtt 441
Query: 464 attgctcaggcctctcaaggtgacctagtgtctggcatgttttgctgggctcattctcta 523
||| |||||| |||||||| |||||||| || || |||||||||||| | ||||| |||
Sbjct: 442 attaatcaggcatctcaaggcgacctagtctcgggaatgttttgctggtcgcattcccta 501
Query: 524 tttcccacattatgtgcgaagtcaagtgggaatccccttgcaagagatttggttttgcag 583
||||||| | ||||| |||| ||||| |||||| | |||||||| | |||||||||
Sbjct: 502 tttcccagtgtgtgtgcaaagttaagtgtgaatcctcagtcaagagatcttgttttgcag 561
Query: 584 ttgct 588
|||||
Sbjct: 562 ttgct 566
>gb|BE414222.1|BE414222 SCU007.E09.R990714 ITEC SCU Wheat Endosperm Library Triticum
aestivum cDNA clone SCU007.E09, mRNA sequence
Length = 681
Score = 283 bits (143), Expect = 1e-074
Identities = 356/427 (83%)
Strand = Plus / Plus
Query: 104 tgggcaaagatgttcaaggaatcaacagtgtctaagatggttgacatcccactgtgccat 163
||||| |||||||||||||| ||| | || | ||||||||||| | ||| ||| ||||
Sbjct: 195 tgggccaagatgttcaaggagtcacccatgcccaagatggttgatgtaccattgtcccat 254
Query: 164 attcctgaggctgtcatcaagactgcgagtgattggatcagtcaaagatcttctgatgcc 223
|||||||| | || ||||||||| |||||||||||||| || |||||| |||||||
Sbjct: 255 gttcctgagccagtttgcaagactgcaagtgattggatcagccagagatctcctgatgca 314
Query: 224 ctgggagactttgttttgtggtgtatagatagcatcatgtctgaattgtcaggtccatca 283
||||||| |||||||||||||||||||||||||||||||| || |||||||||||| |
Sbjct: 315 ttgggagaatttgttttgtggtgtatagatagcatcatgtcggagttgtcaggtccaact 374
Query: 284 gctggccctaagggttcaaagaaggttgcacaacagtctccaagggcccaggttgcaatc 343
| ||| |||||||| | |||||||||| ||||| |||||| ||||||||||||||
Sbjct: 375 gttggacctaagggcgcgaagaaggttgttcaacaaactccaaaagcccaggttgcaata 434
Query: 344 tttgttgttcttgccatgactttaagaagaaagcctgatgtactggtaaatgttatgcca 403
|||||||| |||||| ||||||||||||| ||||| |||||||| |||| | ||
Sbjct: 435 tttgttgtgcttgccttgactttaagaaggaagccagatgtactaataaacctctccccc 494
Query: 404 aagataatgggaaacaataaatatctgggacaggaaaagcttcccatcattgtctgggtt 463
|| ||| |||| |||| ||||||||| ||||||||||||||||||||||| | |||||||
Sbjct: 495 aaaatagtggggaacagtaaatatcttggacaggaaaagcttcccatcatcgcctgggtt 554
Query: 464 attgctcaggcctctcaaggtgacctagtgtctggcatgttttgctgggctcattctcta 523
||| |||||| |||||||| |||||||| || || |||||||||||| | ||||| |||
Sbjct: 555 attaatcaggcatctcaaggcgacctagtctcgggaatgttttgctggtcgcattcccta 614
Query: 524 tttccca 530
|||||||
Sbjct: 615 tttccca 621
>gb|CV770478.1|CV770478 FGAS064871 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 864
Score = 262 bits (132), Expect = 5e-068
Identities = 282/332 (84%)
Strand = Plus / Plus
Query: 227 ggagactttgttttgtggtgtatagatagcatcatgtctgaattgtcaggtccatcagct 286
||||| ||||||||| |||||||||||||||||||||| ||||||||||||||| | | |
Sbjct: 105 ggagaatttgttttgcggtgtatagatagcatcatgtcggaattgtcaggtccaactgtt 164
Query: 287 ggccctaagggttcaaagaaggttgcacaacagtctccaagggcccaggttgcaatcttt 346
|| |||||||| | |||||||||| ||||| |||||| |||||||||||||| |||
Sbjct: 165 ggacctaagggcgcgaagaaggttgttcaacaaactccaaaagcccaggttgcaatattt 224
Query: 347 gttgttcttgccatgactttaagaagaaagcctgatgtactggtaaatgttatgccaaag 406
||||| |||||| ||||||||||||| ||||| |||||||| |||| | |||||
Sbjct: 225 gttgtgcttgccttgactttaagaaggaagccagatgtactaataaacctctccccaaaa 284
Query: 407 ataatgggaaacaataaatatctgggacaggaaaagcttcccatcattgtctgggttatt 466
||| |||| |||| ||||||||| ||||||||||||||||||||||| | ||||||||||
Sbjct: 285 atagtggggaacagtaaatatcttggacaggaaaagcttcccatcatcgcctgggttatt 344
Query: 467 gctcaggcctctcaaggtgacctagtgtctggcatgttttgctgggctcattctctattt 526
|||||| |||||||| |||||||| || || ||||||| |||| ||||| | ||||||
Sbjct: 345 aatcaggcatctcaaggcgacctagtctcgggaatgttttcctggtctcatcccctattt 404
Query: 527 cccacattatgtgcgaagtcaagtgggaatcc 558
|||||| | ||||| |||||||||||||||||
Sbjct: 405 cccacagtttgtgcaaagtcaagtgggaatcc 436
Score = 127 bits (64), Expect = 2e-027
Identities = 194/236 (82%), Gaps = 1/236 (0%)
Strand = Plus / Plus
Query: 697 cacatttcctgtttctaatgctcgagtgaaggctacagaaaggtttgaagcagcctaccc 756
||||||||| || ||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 584 cacatttcccgtgcctaatgcacgtgtcaaggctacagaaaggtttgaagcagcctaccc 643
Query: 757 aatgatcaaggagttggctcttgccggtcctcctggctcaaaaactgtgaaacaagcatc 816
||| || |||||| ||||||||| ||| |||||||||| ||| ||||||| ||||||||
Sbjct: 644 aataataaaggagctggctcttgttggtactcctggctccaaagctgtgaagcaagcatc 703
Query: 817 acaacagcttttacctttgtgtgcaaaagcaatgcaagaaaacaacgcagagctcaccag 876
|| |||||| | || ||| || || || ||||||||||| || ||||||||| |||
Sbjct: 704 gcagcagcttctgccattggctgtgaaggccatgcaagaaaataatgcagagctcgccaa 763
Query: 877 ggaggctgttgatgttttcatttggtgcttaactcaaaatgcagagtcgtacaagc 932
|||| | | ||||| ||||||||||| | ||||| | | ||||||| |||||||
Sbjct: 764 ggagcccct-gatgtgctcatttggtgcctgactcagagtccagagtcctacaagc 818
>gb|CD888949.1|CD888949 G118.110J24F010723 G118 Triticum aestivum cDNA clone G118110J24,
mRNA sequence
Length = 652
Score = 258 bits (130), Expect = 7e-067
Identities = 354/429 (82%)
Strand = Plus / Plus
Query: 104 tgggcaaagatgttcaaggaatcaacagtgtctaagatggttgacatcccactgtgccat 163
||||| |||||||||||||| ||| | || | ||||||||||| | || ||| ||||
Sbjct: 109 tgggccaagatgttcaaggagtcacccatgcccaagatggttgatgtaccgttgtcccat 168
Query: 164 attcctgaggctgtcatcaagactgcgagtgattggatcagtcaaagatcttctgatgcc 223
|||||||| | || ||||||||| |||||||||||||| || |||||| |||||||
Sbjct: 169 gttcctgagccagtttgcaagactgcaagtgattggatcagccagagatctcctgatgca 228
Query: 224 ctgggagactttgttttgtggtgtatagatagcatcatgtctgaattgtcaggtccatca 283
|||| || |||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 229 ttgggggaatttgttttgtggtgtatagatagcatcatgtcggaattgtcaggtccaact 288
Query: 284 gctggccctaagggttcaaagaaggttgcacaacagtctccaagggcccaggttgcaatc 343
| ||| |||||||| | |||||||||| ||||| |||||| ||||||||||||||
Sbjct: 289 gttggacctaagggcgcgaagaaggttgttcaacaaactccaaaagcccaggttgcaata 348
Query: 344 tttgttgttcttgccatgactttaagaagaaagcctgatgtactggtaaatgttatgcca 403
||||| || |||||| ||||||| || || ||||| |||||||| |||| | |||
Sbjct: 349 tttgtggtgcttgccttgactttgaggaggaagccagatgtactaataaacctctcccca 408
Query: 404 aagataatgggaaacaataaatatctgggacaggaaaagcttcccatcattgtctgggtt 463
|| ||| |||| |||| ||||||||| ||||||||||||||||||||||| | |||||||
Sbjct: 409 aaaatagtggggaacagtaaatatcttggacaggaaaagcttcccatcatcgcctgggtt 468
Query: 464 attgctcaggcctctcaaggtgacctagtgtctggcatgttttgctgggctcattctcta 523
||| |||||| |||||||| |||||||| || || |||| ||||||| | ||||| |||
Sbjct: 469 attaatcaggcatctcaaggcgacctagtctcaggaatgtnttgctggtcgcattcccta 528
Query: 524 tttcccaca 532
|||||||||
Sbjct: 529 tttcccaca 537
>gb|BF484250.1|BF484250 WHE2321_A08_A15ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2321_A08_A15, mRNA sequence
Length = 371
Score = 252 bits (127), Expect = 5e-065
Identities = 280/331 (84%)
Strand = Plus / Plus
Query: 181 caagactgcgagtgattggatcagtcaaagatcttctgatgccctgggagactttgtttt 240
||||||||| |||||||||||||| || |||||| ||||||| ||||||| ||||||||
Sbjct: 39 caagactgcaagtgattggatcagccagagatctcctgatgcattgggagaatttgtttt 98
Query: 241 gtggtgtatagatagcatcatgtctgaattgtcaggtccatcagctggccctaagggttc 300
|||||||||||||||||||||||| ||||||||||||||| | | ||| |||||||| |
Sbjct: 99 gtggtgtatagatagcatcatgtcggaattgtcaggtccaactgttggacctaagggcgc 158
Query: 301 aaagaaggttgcacaacagtctccaagggcccaggttgcaatctttgttgttcttgccat 360
|||||||||| ||||| |||||| |||||||||||||| |||||||| |||||| |
Sbjct: 159 gaagaaggttgttcaacaaactccaaaagcccaggttgcaatatttgttgtgcttgcctt 218
Query: 361 gactttaagaagaaagcctgatgtactggtaaatgttatgccaaagataatgggaaacaa 420
|||||||||||| ||||| |||||||| |||| | ||||| ||| |||| ||||
Sbjct: 219 gactttaagaaggaagccagatgtactaataaacctctccccaaaaatagtggggaacag 278
Query: 421 taaatatctgggacaggaaaagcttcccatcattgtctgggttattgctcaggcctctca 480
||||||||| ||||||||||||||||||||||| | |||||||||| ||| || |||||
Sbjct: 279 taaatatcttggacaggaaaagcttcccatcatcgcctgggttattaatcatgcatctca 338
Query: 481 aggtgacctagtgtctggcatgttttgctgg 511
||| |||||| | || || ||||||| ||||
Sbjct: 339 aggcgacctactctcgggaatgttttcctgg 369
>gb|AL808299.1|AL808299 AL808299 a:22 Triticum aestivum cDNA clone H02_a22_plate_14, mRNA
sequence
Length = 253
Score = 212 bits (107), Expect = 4e-053
Identities = 182/207 (87%)
Strand = Plus / Plus
Query: 181 caagactgcgagtgattggatcagtcaaagatcttctgatgccctgggagactttgtttt 240
||||||||| |||||||||||||| || |||||| ||||||| ||||||| ||||||||
Sbjct: 44 caagactgcaagtgattggatcagccagagatctcctgatgcattgggagaatttgtttt 103
Query: 241 gtggtgtatagatagcatcatgtctgaattgtcaggtccatcagctggccctaagggttc 300
|||||||||||||||||||||||| ||||||||||||||| | | ||| |||||||| |
Sbjct: 104 gtggtgtatagatagcatcatgtcggaattgtcaggtccaactgttggacctaagggcgc 163
Query: 301 aaagaaggttgcacaacagtctccaagggcccaggttgcaatctttgttgttcttgccat 360
|||||||||| |||||| |||||| |||||||||||||| |||||||| |||||| |
Sbjct: 164 gaagaaggttgtacaacaaactccaaaagcccaggttgcaatatttgttgtgcttgcctt 223
Query: 361 gactttaagaagaaagcctgatgtact 387
|||||||||||| ||||| ||||||||
Sbjct: 224 gactttaagaaggaagccagatgtact 250
>gb|CA635069.1|CA635069 wle1n.pk0092.g5 wle1n Triticum aestivum cDNA clone wle1n.pk0092.g5
5' end, mRNA sequence
Length = 617
Score = 204 bits (103), Expect = 9e-051
Identities = 181/207 (87%)
Strand = Plus / Plus
Query: 181 caagactgcgagtgattggatcagtcaaagatcttctgatgccctgggagactttgtttt 240
||||||||| |||||||||||||| || |||||| ||||||| ||||||| ||||||||
Sbjct: 60 caagactgcaagtgattggatcagccagagatctcctgatgcattgggagaatttgtttt 119
Query: 241 gtggtgtatagatagcatcatgtctgaattgtcaggtccatcagctggccctaagggttc 300
|||||||||||||||||||||||| ||||||||||||||| | | ||| |||||||| |
Sbjct: 120 gtggtgtatagatagcatcatgtcggaattgtcaggtccaactgttggacctaagggcgc 179
Query: 301 aaagaaggttgcacaacagtctccaagggcccaggttgcaatctttgttgttcttgccat 360
|||||||||| ||||| |||||| |||||||||||||| |||||||| |||||| |
Sbjct: 180 gaagaaggttgttcaacaaactccaaaagcccaggttgcaatatttgttgtgcttgcctt 239
Query: 361 gactttaagaagaaagcctgatgtact 387
|||||||||||| ||||| ||||||||
Sbjct: 240 gactttaagaaggaagccagatgtact 266
>gb|CK161519.1|CK161519 FGAS014090 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1124
Score = 194 bits (98), Expect = 9e-048
Identities = 236/282 (83%)
Strand = Plus / Plus
Query: 104 tgggcaaagatgttcaaggaatcaacagtgtctaagatggttgacatcccactgtgccat 163
||||| |||||||||||||| ||| | || | ||||||||||| | || ||| ||||
Sbjct: 226 tgggcgaagatgttcaaggagtcacccatgcccaagatggttgatgtacccttgtcccat 285
Query: 164 attcctgaggctgtcatcaagactgcgagtgattggatcagtcaaagatcttctgatgcc 223
|||||||| | || ||||||||| ||||||||||||| || |||||| |||||||
Sbjct: 286 gttcctgagccagtttgcaagactgcaagtgattggatcacccagagatctcctgatgca 345
Query: 224 ctgggagactttgttttgtggtgtatagatagcatcatgtctgaattgtcaggtccatca 283
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 346 ttgggagaatttgttttgtggtgtatagatagcatcatgtctgaattgtcaggtccaact 405
Query: 284 gctggccctaagggttcaaagaaggttgcacaacagtctccaagggcccaggttgcaatc 343
| || |||||||| || |||||||||| ||||| |||||| ||||||||||||||
Sbjct: 406 gtgggacctaagggctcgaagaaggttgttcaacaaactccaaaagcccaggttgcaata 465
Query: 344 tttgttgttcttgccatgactttaagaagaaagcctgatgta 385
|| ||||| |||||| ||||||||||||| ||||| ||||||
Sbjct: 466 ttcgttgtgcttgccttgactttaagaaggaagccagatgta 507
Score = 145 bits (73), Expect = 8e-033
Identities = 148/173 (85%)
Strand = Plus / Plus
Query: 416 aacaataaatatctgggacaggaaaagcttcccatcattgtctgggttattgctcaggcc 475
|||| ||||||||| ||||||||||||||||||||||| | |||||||||| ||||||
Sbjct: 538 aacagtaaatatcttggacaggaaaagcttcccatcatcgcctgggttattaatcaggca 597
Query: 476 tctcaaggtgacctagtgtctggcatgttttgctgggctcattctctatttcccacatta 535
|||||||| |||||||| || || |||||||||||| | ||||| |||||||||||| |
Sbjct: 598 tctcaaggcgacctagtctcgggaatgttttgctggtcgcattccctatttcccacagtg 657
Query: 536 tgtgcgaagtcaagtgggaatccccttgcaagagatttggttttgcagttgct 588
||||| |||||||||| ||| || | |||||||| | ||||||||||||||
Sbjct: 658 tgtgcaaagtcaagtgtgaacccgcagtcaagagatcttgttttgcagttgct 710
Score = 81.8 bits (41), Expect = 9e-014
Identities = 111/132 (84%), Gaps = 2/132 (1%)
Strand = Plus / Plus
Query: 697 cacatttcctgtttctaatgctcgagtgaaggctacagaaaggtttgaagcagcctaccc 756
||||||||| || ||||||| || || |||||||||||||||||||| |||| ||| ||
Sbjct: 828 cacatttcccgtgcctaatgcacgtgtcaaggctacagaaaggtttgaggcagnctatcc 887
Query: 757 aatgatcaaggagttggct-cttgccggtcctcctggctcaaaaactgtgaaacaagcat 815
||| || || ||| ||||| |||| ||| |||||||||| ||| ||||||| |||||||
Sbjct: 888 aat-attaaagagctggctccttgttggtactcctggctccaaagctgtgaagcaagcat 946
Query: 816 cacaacagcttt 827
|||| |||||||
Sbjct: 947 cacagcagcttt 958
>gb|CV774703.1|CV774703 FGAS069103 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 837
Score = 192 bits (97), Expect = 4e-047
Identities = 178/205 (86%)
Strand = Plus / Plus
Query: 181 caagactgcgagtgattggatcagtcaaagatcttctgatgccctgggagactttgtttt 240
||||||||| ||||||||||||| || |||||| ||||||| ||||||| ||||||||
Sbjct: 119 caagactgcaagtgattggatcacccagagatctcctgatgcattgggagaatttgtttt 178
Query: 241 gtggtgtatagatagcatcatgtctgaattgtcaggtccatcagctggccctaagggttc 300
|||||||||||||||||||||||||||||||||||||||| | | || |||||||| ||
Sbjct: 179 gtggtgtatagatagcatcatgtctgaattgtcaggtccaactgtgggacctaagggctc 238
Query: 301 aaagaaggttgcacaacagtctccaagggcccaggttgcaatctttgttgttcttgccat 360
|||||||||| ||||| |||||| |||||||||||||| || ||||| |||||| |
Sbjct: 239 gaagaaggttgttcaacaaactccaaaagcccaggttgcaatattcgttgtgcttgcctt 298
Query: 361 gactttaagaagaaagcctgatgta 385
|||||||||||| ||||| ||||||
Sbjct: 299 gactttaagaaggaagccagatgta 323
Score = 145 bits (73), Expect = 8e-033
Identities = 148/173 (85%)
Strand = Plus / Plus
Query: 416 aacaataaatatctgggacaggaaaagcttcccatcattgtctgggttattgctcaggcc 475
|||| ||||||||| ||||||||||||||||||||||| | |||||||||| ||||||
Sbjct: 354 aacagtaaatatcttggacaggaaaagcttcccatcatcgcctgggttattaatcaggca 413
Query: 476 tctcaaggtgacctagtgtctggcatgttttgctgggctcattctctatttcccacatta 535
|||||||| |||||||| || || |||||||||||| | ||||| |||||||||||| |
Sbjct: 414 tctcaaggcgacctagtctcgggaatgttttgctggtcgcattccctatttcccacagtg 473
Query: 536 tgtgcgaagtcaagtgggaatccccttgcaagagatttggttttgcagttgct 588
||||| |||||||||| ||| || | |||||||| | ||||||||||||||
Sbjct: 474 tgtgcaaagtcaagtgtgaacccgcagtcaagagatcttgttttgcagttgct 526
>gb|CD908752.1|CD908752 G468.110N17F010817 G468 Triticum aestivum cDNA clone G468110N17,
mRNA sequence
Length = 598
Score = 172 bits (87), Expect = 3e-041
Identities = 237/287 (82%)
Strand = Plus / Plus
Query: 302 aagaaggttgcacaacagtctccaagggcccaggttgcaatctttgttgttcttgccatg 361
|||||||||| ||||| |||||| |||||||||||||| ||||| || |||||| ||
Sbjct: 39 aagaaggttgttcaacaaactccaaaagcccaggttgcaatatttgtggtgcttgccttg 98
Query: 362 actttaagaagaaagcctgatgtactggtaaatgttatgccaaagataatgggaaacaat 421
||||| || || ||||| |||||||| |||| | ||||| ||| |||| |||| |
Sbjct: 99 actttgaggaggaagccagatgtactaataaacctctccccaaaaatagtggggaacagt 158
Query: 422 aaatatctgggacaggaaaagcttcccatcattgtctgggttattgctcaggcctctcaa 481
|||||||| ||||||||||||||||||||||| | |||||||||| |||||| ||||||
Sbjct: 159 aaatatcttggacaggaaaagcttcccatcatcgcctgggttattaatcaggcatctcaa 218
Query: 482 ggtgacctagtgtctggcatgttttgctgggctcattctctatttcccacattatgtgcg 541
|| |||||||| || || |||||||||||| | ||||| |||||||||||| | |||||
Sbjct: 219 ggcgacctagtctcaggaatgttttgctggtcgcattccctatttcccacagtgtgtgca 278
Query: 542 aagtcaagtgggaatccccttgcaagagatttggttttgcagttgct 588
|||||||||| |||||| | |||||||| | ||||| ||||||||
Sbjct: 279 aagtcaagtgtgaatcctcagtcaagagatcttgttttacagttgct 325
Score = 101 bits (51), Expect = 1e-019
Identities = 117/139 (84%)
Strand = Plus / Plus
Query: 697 cacatttcctgtttctaatgctcgagtgaaggctacagaaaggtttgaagcagcctaccc 756
||||||||| || ||||||| || || |||||||||||||| |||||||||||||||||
Sbjct: 443 cacatttcccgtgcctaatgcacgtgtcaaggctacagaaagatttgaagcagcctaccc 502
Query: 757 aatgatcaaggagttggctcttgccggtcctcctggctcaaaaactgtgaaacaagcatc 816
|| || |||||| ||||||||| || | |||||||| ||| ||||||| ||||||||
Sbjct: 503 aacaataaaggagctggctcttgttggcacccctggctccaaagctgtgaagcaagcatc 562
Query: 817 acaacagcttttacctttg 835
||| |||||| | ||||||
Sbjct: 563 acagcagcttctgcctttg 581
>gb|CN011109.1|CN011109 WHE3880_A07_A14ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3880_A07_A14,
mRNA sequence
Length = 661
Score = 163 bits (82), Expect = 3e-038
Identities = 193/230 (83%)
Strand = Plus / Plus
Query: 329 gcccaggttgcaatctttgttgttcttgccatgactttaagaagaaagcctgatgtactg 388
||||||| |||||| |||||||| |||||| ||||||||||||| ||||| ||||||||
Sbjct: 22 gcccaggatgcaatatttgttgtgcttgccttgactttaagaaggaagccagatgtacta 81
Query: 389 gtaaatgttatgccaaagataatgggaaacaataaatatctgggacaggaaaagcttccc 448
|||| | ||||| ||| |||| |||| ||||||||| ||||||||||||||||||
Sbjct: 82 ataaacctctccccaaaaatagtggggaacagtaaatatcttggacaggaaaagcttccc 141
Query: 449 atcattgtctgggttattgctcaggcctctcaaggtgacctagtgtctggcatgttttgc 508
||||| | |||||||||| ||| || |||||||| |||||||| || || ||| ||| |
Sbjct: 142 atcatcgcctgggttattaatcacgcatctcaaggcgacctagtctcgggaatgatttcc 201
Query: 509 tgggctcattctctatttcccacattatgtgcgaagtcaagtgggaatcc 558
||| ||||||| |||||||||||| | ||||| ||| |||||||||||||
Sbjct: 202 tggtctcattccctatttcccacagtttgtgcaaagacaagtgggaatcc 251
Score = 143 bits (72), Expect = 3e-032
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 697 cacatttcctgtttctaatgctcgagtgaaggctacagaaaggtttgaagcagcctaccc 756
||||||||| || ||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 399 cacatttcccgtgcctaatgcacgtgtcaaggctacagaaaggtttgaagcagcctaccc 458
Query: 757 aatgatcaaggagttggctcttgccggtcctcctggctcaaaaactgtgaaacaagcatc 816
||| || |||||| ||||||||| ||| |||||||||| ||| ||||||| ||||||||
Sbjct: 459 aataataaaggagctggctcttgttggtactcctggctccaaagctgtgaagcaagcatc 518
Query: 817 acaacagcttttacctttgtgtgcaaaagcaatgcaagaaaacaacgcagagctcaccag 876
|| |||||| | || ||| || || || ||||||||||| || ||||||||| |||
Sbjct: 519 gcagcagcttctgccattggctgtgaaggccatgcaagaaaataatgcagagctcgccaa 578
Query: 877 ggaggctgttgatgttttcatttggtgcttaactcaaaatgcagagtcgtacaagc 932
|||||| |||||| | |||||||||| | ||||| | | ||||||| |||||||
Sbjct: 579 ggaggccactgatgtgtacatttggtgcctgactcagagtccagagtcctacaagc 634
>gb|BJ302416.1|BJ302416 BJ302416 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd15c06 5', mRNA sequence
Length = 589
Score = 151 bits (76), Expect = 1e-034
Identities = 196/236 (83%)
Strand = Plus / Plus
Query: 697 cacatttcctgtttctaatgctcgagtgaaggctacagaaaggtttgaagcagcctaccc 756
||||||||| || ||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 37 cacatttcccgtgcctaatgcacgcgtcaaggctacagaaaggtttgaagcagcctaccc 96
Query: 757 aatgatcaaggagttggctcttgccggtcctcctggctcaaaaactgtgaaacaagcatc 816
||| || |||||| ||||||||| ||| |||||||||| ||| ||||||| ||||||||
Sbjct: 97 aataataaaggagctggctcttgttggtactcctggctccaaagctgtgaagcaagcatc 156
Query: 817 acaacagcttttacctttgtgtgcaaaagcaatgcaagaaaacaacgcagagctcaccag 876
||| |||||| | |||||| || || |||||||||||||| || |||||||| |||
Sbjct: 157 acagcagcttctgcctttggctgtgaaggcaatgcaagaaaataatgcagagcttgccaa 216
Query: 877 ggaggctgttgatgttttcatttggtgcttaactcaaaatgcagagtcgtacaagc 932
|||||| ||||| ||||| |||||| | ||||| | | ||||||| |||||||
Sbjct: 217 ggaggccaccgatgtgttcatctggtgcctgactcagagtccagagtcctacaagc 272
>gb|CV758871.1|CV758871 FGAS053253 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 634
Score = 151 bits (76), Expect = 1e-034
Identities = 196/236 (83%)
Strand = Plus / Plus
Query: 697 cacatttcctgtttctaatgctcgagtgaaggctacagaaaggtttgaagcagcctaccc 756
||||||||| || ||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 332 cacatttcccgtgcctaatgcacgtgtcaaggctacagaaaggtttgaagcagcctaccc 391
Query: 757 aatgatcaaggagttggctcttgccggtcctcctggctcaaaaactgtgaaacaagcatc 816
||| || |||||| ||||||||| ||| |||||||||| ||| ||||||| ||||||||
Sbjct: 392 aataataaaggagctggctcttgttggtactcctggctccaaagctgtgaagcaagcatc 451
Query: 817 acaacagcttttacctttgtgtgcaaaagcaatgcaagaaaacaacgcagagctcaccag 876
|| |||||| | || ||| || || || ||||||||||| || ||||||||| |||
Sbjct: 452 gcagcagcttctgccattggctgtgaaggccatgcaagaaaataatgcagagctcgccaa 511
Query: 877 ggaggctgttgatgttttcatttggtgcttaactcaaaatgcagagtcgtacaagc 932
|||||| |||||| |||||||||||| | ||||| | | ||||||| |||||||
Sbjct: 512 ggaggccactgatgtgttcatttggtgcctgactcagagtccagagtcctacaagc 567
Score = 75.8 bits (38), Expect = 6e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 485 gacctagtgtctggcatgttttgctgggctcattctctatttcccacattatgtgcgaag 544
|||||||| || || ||||||| |||| ||||||| |||||||||||| | ||||| |||
Sbjct: 111 gacctagtctcgggaatgttttcctggtctcattccctatttcccacagtttgtgcaaag 170
Query: 545 tcaagtgggaatcc 558
||||||||||||||
Sbjct: 171 tcaagtgggaatcc 184
>gb|CV759849.1|CV759849 FGAS054233 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 839
Score = 151 bits (76), Expect = 1e-034
Identities = 196/236 (83%)
Strand = Plus / Plus
Query: 697 cacatttcctgtttctaatgctcgagtgaaggctacagaaaggtttgaagcagcctaccc 756
||||||||| || ||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 155 cacatttcccgtgcctaatgcacgcgtcaaggctacagaaaggtttgaagcagcctaccc 214
Query: 757 aatgatcaaggagttggctcttgccggtcctcctggctcaaaaactgtgaaacaagcatc 816
||| || |||||| ||||||||| ||| |||||||||| ||| ||||||| ||||||||
Sbjct: 215 aataataaaggagctggctcttgttggtactcctggctccaaagctgtgaagcaagcatc 274
Query: 817 acaacagcttttacctttgtgtgcaaaagcaatgcaagaaaacaacgcagagctcaccag 876
||| |||||| | |||||| || || |||||||||||||| || |||||||| |||
Sbjct: 275 acagcagcttctgcctttggctgtgaaggcaatgcaagaaaataatgcagagcttgccaa 334
Query: 877 ggaggctgttgatgttttcatttggtgcttaactcaaaatgcagagtcgtacaagc 932
|||||| ||||| ||||| |||||| | ||||| | | ||||||| |||||||
Sbjct: 335 ggaggccaccgatgtgttcatctggtgcctgactcagagtccagagtcctacaagc 390
>gb|CV764917.1|CV764917 FGAS059302 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 803
Score = 151 bits (76), Expect = 1e-034
Identities = 196/236 (83%)
Strand = Plus / Plus
Query: 697 cacatttcctgtttctaatgctcgagtgaaggctacagaaaggtttgaagcagcctaccc 756
||||||||| || ||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 334 cacatttcccgtgcctaatgcacgtgtcaaggctacagaaaggtttgaagcagcctaccc 393
Query: 757 aatgatcaaggagttggctcttgccggtcctcctggctcaaaaactgtgaaacaagcatc 816
||| || |||||| ||||||||| ||| |||||||||| ||| ||||||| ||||||||
Sbjct: 394 aataataaaggagctggctcttgttggtactcctggctccaaagctgtgaagcaagcatc 453
Query: 817 acaacagcttttacctttgtgtgcaaaagcaatgcaagaaaacaacgcagagctcaccag 876
|| |||||| | || ||| || || || ||||||||||| || ||||||||| |||
Sbjct: 454 gcagcagcttctgccattggctgtgaaggccatgcaagaaaataatgcagagctcgccaa 513
Query: 877 ggaggctgttgatgttttcatttggtgcttaactcaaaatgcagagtcgtacaagc 932
|||||| |||||| |||||||||||| | ||||| | | ||||||| |||||||
Sbjct: 514 ggaggccactgatgtgttcatttggtgcctgactcagagtccagagtcctacaagc 569
Score = 75.8 bits (38), Expect = 6e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 485 gacctagtgtctggcatgttttgctgggctcattctctatttcccacattatgtgcgaag 544
|||||||| || || ||||||| |||| ||||||| |||||||||||| | ||||| |||
Sbjct: 113 gacctagtctcgggaatgttttcctggtctcattccctatttcccacagtttgtgcaaag 172
Query: 545 tcaagtgggaatcc 558
||||||||||||||
Sbjct: 173 tcaagtgggaatcc 186
>gb|CA640432.1|CA640432 wre1n.pk0035.a5 wre1n Triticum aestivum cDNA clone wre1n.pk0035.a5
5' end, mRNA sequence
Length = 552
Score = 145 bits (73), Expect = 8e-033
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 697 cacatttcctgtttctaatgctcgagtgaaggctacagaaaggtttgaagcagcctaccc 756
||||||||| || ||||||| || || |||||||||||| |||||||||||||||||||
Sbjct: 27 cacatttcccgtgcctaatgcacgtgtcaaggctacagaanggtttgaagcagcctaccc 86
Query: 757 aatgatcaaggagttggctcttgccggtcctcctggctcaaaaactgtgaaacaagcatc 816
||| || |||||| ||||||||| ||| |||||||||| ||| ||||||| ||||||||
Sbjct: 87 aataataaaggagctggctcttgttggtactcctggctccaaagctgtgaagcaagcatc 146
Query: 817 acaacagcttttacctttgtgtgcaaaagcaatgcaagaaaacaacgcagagctcaccag 876
|| |||||| | || ||| || || || ||||||||||| || ||||||||| |||
Sbjct: 147 gcagcagcttctgccattggctgtgaaggccatgcaagaaaataatgcagagctcgccaa 206
Query: 877 ggaggctgttgatgttttcatttggtgcttaactcaaaatgcagagtcgtacaagc 932
|||||| |||||| |||||||||||| | ||||| | | ||||||| |||||||
Sbjct: 207 ggaggccactgatgtgttcatttggtgcctgactcagagtccagagtcctacaagc 262
>gb|CV759230.1|CV759230 FGAS053613 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 878
Score = 143 bits (72), Expect = 3e-032
Identities = 174/208 (83%)
Strand = Plus / Plus
Query: 697 cacatttcctgtttctaatgctcgagtgaaggctacagaaaggtttgaagcagcctaccc 756
||||||||| || ||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 332 cacatttcccgtgcctaatgcacgtgtcaaggctacagaaaggtttgaagcagcctaccc 391
Query: 757 aatgatcaaggagttggctcttgccggtcctcctggctcaaaaactgtgaaacaagcatc 816
||| || |||||| ||||||||| ||| |||||||||| ||| ||||||| ||||||||
Sbjct: 392 aataataaaggagctggctcttgttggtactcctggctccaaagctgtgaagcaagcatc 451
Query: 817 acaacagcttttacctttgtgtgcaaaagcaatgcaagaaaacaacgcagagctcaccag 876
|| |||||| | || ||| || || || ||||||||||| || ||||||||| |||
Sbjct: 452 gcagcagcttctgccattggctgtgaaggccatgcaagaaaataatgcagagctcgccaa 511
Query: 877 ggaggctgttgatgttttcatttggtgc 904
|||||| |||||| ||||||||||||
Sbjct: 512 ggaggccactgatgtgttcatttggtgc 539
Score = 75.8 bits (38), Expect = 6e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 485 gacctagtgtctggcatgttttgctgggctcattctctatttcccacattatgtgcgaag 544
|||||||| || || ||||||| |||| ||||||| |||||||||||| | ||||| |||
Sbjct: 111 gacctagtctcgggaatgttttcctggtctcattccctatttcccacagtttgtgcaaag 170
Query: 545 tcaagtgggaatcc 558
||||||||||||||
Sbjct: 171 tcaagtgggaatcc 184
>gb|BG607395.1|BG607395 WHE2479_B10_C19ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2479_B10_C19,
mRNA sequence
Length = 489
Score = 137 bits (69), Expect = 2e-030
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 104 tgggcaaagatgttcaaggaatcaacagtgtctaagatggttgacatcccactgtgccat 163
||||| |||||||||||||| ||| | || | ||||||||||| | || ||| ||||
Sbjct: 321 tgggcgaagatgttcaaggagtcacccatgcccaagatggttgatgtacccttgtcccat 380
Query: 164 attcctgaggctgtcatcaagactgcgagtgattggatcagtcaaagatcttctgatgcc 223
|||||||| | || ||||||||| |||||||||||||| || |||||| |||||||
Sbjct: 381 gttcctgagccagtttgcaagactgcaagtgattggatcagccagagatctcctgatgca 440
Query: 224 ctgggagactttgttttgtggtgtatagatagcatcatgtctgaattgt 272
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgggagaatttgttttgtggtgtatagatagcatcatgtctgaattgt 489
>gb|BE415007.1|BE415007 MWL010.D11F990629 ITEC MWL Wheat Root Library Triticum aestivum
cDNA clone MWL010.D11, mRNA sequence
Length = 385
Score = 123 bits (62), Expect = 3e-026
Identities = 150/178 (84%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 104 tgggcaaagatgttcaaggaatcaacagtgtctaagatggttgacatcccactgtgccat 163
||||| |||||||||||||| ||| | || | ||||||||||| | || ||| ||||
Sbjct: 185 tgggcgaagatgttcaaggagtcacccatgcccaagatggttgatgtacccttgtcccat 244
Query: 164 attcctgaggctgtcatcaagactgcgagtgattggatcagtcaaagatcttctgatgcc 223
|||||||| | || ||||||||| ||||||||||||| || |||||| |||||||
Sbjct: 245 gttcctgagccagtttgcaagactgcaagtgattggatcacccagagatctcctgatgca 304
Query: 224 ctgggagactttgttttgtggtgtatagatagcatcatgtc-tgaattgtcaggtcca 280
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 305 ttgggagaatttgttttgtggtgtatagatagcatcatgtcttgaattgtcaggtcca 362
>gb|BQ842761.1|BQ842761 WHE2998_A08_B16ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2998_A08_B16, mRNA sequence
Length = 359
Score = 123 bits (62), Expect = 3e-026
Identities = 113/130 (86%)
Strand = Plus / Plus
Query: 697 cacatttcctgtttctaatgctcgagtgaaggctacagaaaggtttgaagcagcctaccc 756
||||||||| || ||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 192 cacatttcccgtgcctaatgcacgtgtcaaggctacagaaaggtttgaagcagcctaccc 251
Query: 757 aatgatcaaggagttggctcttgccggtcctcctggctcaaaaactgtgaaacaagcatc 816
||| || |||||| ||||||||| ||| |||||||||| ||| ||||||| ||||||||
Sbjct: 252 aataataaaggagctggctcttgttggtactcctggctccaaagctgtgaagcaagcatc 311
Query: 817 acaacagctt 826
|| ||||||
Sbjct: 312 gcaccagctt 321
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 515 cattctctatttcccacattatgtgcgaagtcaagtgggaatcc 558
||||| |||||||||||| | ||||| |||||||||||||||||
Sbjct: 1 cattccctatttcccacagtttgtgcaaagtcaagtgggaatcc 44
>gb|CK206351.1|CK206351 FGAS017940 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1146
Score = 111 bits (56), Expect = 1e-022
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 181 caagactgcgagtgattggatcagtcaaagatcttctgatgccctgggagactttgtttt 240
||||||||| |||||||||||||| || |||||| ||||||| |||||| ||||||||
Sbjct: 771 caagactgcaagtgattggatcagccagagatctcctgatgcatngggagaatttgtttt 830
Query: 241 gtggtgtatagatagcatcatgtctgaattgtcaggtcc 279
|||||||||||||||||||||||| | | ||||||||||
Sbjct: 831 gtggtgtatagatagcatcatgtcgggagtgtcaggtcc 869
>gb|CD939767.1|CD939767 OV.114P02F010312 OV Triticum aestivum cDNA clone OV114P02, mRNA
sequence
Length = 707
Score = 105 bits (53), Expect = 7e-021
Identities = 158/193 (81%)
Strand = Plus / Plus
Query: 740 tttgaagcagcctacccaatgatcaaggagttggctcttgccggtcctcctggctcaaaa 799
||||||||||||||||||| || |||||| ||||||||| || | |||||||| |||
Sbjct: 3 tttgaagcagcctacccaacaataaaggagctggctcttgttggcacccctggctccaaa 62
Query: 800 actgtgaaacaagcatcacaacagcttttacctttgtgtgcaaaagcaatgcaagaaaac 859
||||||| ||||||||||| |||||| | |||||| || || ||||||||||||||
Sbjct: 63 gctgtgaagcaagcatcacagcagcttctgcctttggctgtgaaggcaatgcaagaaaat 122
Query: 860 aacgcagagctcaccagggaggctgttgatgttttcatttggtgcttaactcaaaatgca 919
|| |||||||| ||| |||||| |||||| |||||||||||| | ||||| | | ||
Sbjct: 123 aatgcagagcttgccaaggaggccactgatgtgttcatttggtgcctgactcagagtcca 182
Query: 920 gagtcgtacaagc 932
||||| |||||||
Sbjct: 183 gagtcctacaagc 195
>gb|BQ901971.1|BQ901971 Ta02_10e10_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_10e10, mRNA
sequence
Length = 353
Score = 69.9 bits (35), Expect = 4e-010
Identities = 119/147 (80%)
Strand = Plus / Minus
Query: 786 ctcctggctcaaaaactgtgaaacaagcatcacaacagcttttacctttgtgtgcaaaag 845
|||||||||| ||| ||||||| |||||||| || |||||| | || ||| || || |
Sbjct: 352 ctcctggctccaaagctgtgaagcaagcatcgcagcagcttctgccattggctgtgaagg 293
Query: 846 caatgcaagaaaacaacgcagagctcaccagggaggctgttgatgttttcatttggtgct 905
| ||||||||||| || ||||||||| ||| |||||| |||||| ||||||||||||
Sbjct: 292 ccatgcaagaaaataatgcagagctcgccaaggaggccactgatgtgttcatttggtgcc 233
Query: 906 taactcaaaatgcagagtcgtacaagc 932
| ||||| | | ||||||| |||||||
Sbjct: 232 tgactcagagtccagagtcctacaagc 206
>gb|CA502262.1|CA502262 WHE4045_A09_A17ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4045_A09_A17, mRNA sequence
Length = 648
Score = 60.0 bits (30), Expect = 3e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 847 aatgcaagaaaacaacgcagagctcaccagggaggctgttgatgttttcatttggtgctt 906
|||||||||||| || ||||||||| ||| |||||| |||||| |||||||||||| |
Sbjct: 76 aatgcaagaaaataatgcagagctcgccaaggaggccactgatgtgttcatttggtgcct 135
Query: 907 aactcaaaatgcagagtcgtacaagc 932
||||| | | ||||||| |||||||
Sbjct: 136 gactcagagtccagagtcctacaagc 161
>gb|CD910359.1|CD910359 G550.001B10F010301 G550 Triticum aestivum cDNA clone G550001B10,
mRNA sequence
Length = 705
Score = 56.0 bits (28), Expect = 5e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 727 ggctacagaaaggtttgaagcagcctacccaa 758
||||||||||||||| ||||||||||||||||
Sbjct: 648 ggctacagaaaggttggaagcagcctacccaa 679
>gb|BJ230169.1|BJ230169 BJ230169 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl21k19 3', mRNA sequence
Length = 755
Score = 52.0 bits (26), Expect = 8e-005
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 848 atgcaagaaaacaacgcagagctcaccagggaggctgttgatgttttcatttggtgctta 907
||||||||||| || ||||||||| ||| | |||| |||||| |||||||||||| |
Sbjct: 752 atgcaagaaaataatgcagagctcgccaagnaggccactgatgtgttcatttggtgcctg 693
Query: 908 actcaaaatgcagagtcgtacaagc 932
||||| | | ||||||| |||||||
Sbjct: 692 actcagagtccagagtcctacaagc 668
>gb|CN008535.1|CN008535 WHE2642_C11_E22ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2642_C11_E22,
mRNA sequence
Length = 462
Score = 52.0 bits (26), Expect = 8e-005
Identities = 95/118 (80%)
Strand = Plus / Plus
Query: 105 gggcaaagatgttcaaggaatcaacagtgtctaagatggttgacatcccactgtgccata 164
|||| |||||||||||||| ||| | || | ||||||||||| | || ||| ||||
Sbjct: 345 gggcgaagatgttcaaggagtcacccatgcccaagatggttgatgtaccgttgtcccatg 404
Query: 165 ttcctgaggctgtcatcaagactgcgagtgattggatcagtcaaagatcttctgatgc 222
|||||||| | || ||||||||| |||||||||||||| || |||||| |||||||
Sbjct: 405 ttcctgagccagtttgcaagactgcaagtgattggatcagccagagatctcctgatgc 462
>gb|CA713189.1|CA713189 wdk3c.pk011.i21 wdk3c Triticum aestivum cDNA clone wdk3c.pk011.i21
5' end, mRNA sequence
Length = 249
Score = 48.1 bits (24), Expect = 0.001
Identities = 99/124 (79%)
Strand = Plus / Plus
Query: 809 caagcatcacaacagcttttacctttgtgtgcaaaagcaatgcaagaaaacaacgcagag 868
||||||||||| |||||| | |||||| || || |||||||||||||| || ||||||
Sbjct: 2 caagcatcacagcagcttctgcctttggctgtgaaggcaatgcaagaaaataatgcagag 61
Query: 869 ctcaccagggaggctgttgatgttttcatttggtgcttaactcaaaatgcagagtcgtac 928
|| ||| |||||| ||||| ||||| |||||| | ||||| | | ||||||| |||
Sbjct: 62 cttgccaaggaggccaccgatgtgttcatctggtgcctgactcagagtccagagtcctac 121
Query: 929 aagc 932
||||
Sbjct: 122 aagc 125
>gb|CA731160.1|CA731160 wip1c.pk007.n13 wip1c Triticum aestivum cDNA clone wip1c.pk007.n13
5' end, mRNA sequence
Length = 578
Score = 44.1 bits (22), Expect = 0.021
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 885 ttgatgttttcatttggtgcttaactcaaaatgcagagtcgtacaa 930
||||||| |||||||||||||| ||||| | | ||||||| |||||
Sbjct: 330 ttgatgtgttcatttggtgcttgactcagagtccagagtcctacaa 285
>gb|BE213632.1|BE213632 EST0322 Triticum aestivum Lambda Zap Triticum aestivum cDNA clone
JA1_4D_C07_T3 5', mRNA sequence
Length = 457
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 836 tgtgcaaaagcaatgcaaga 855
||||||||||||||||||||
Sbjct: 418 tgtgcaaaagcaatgcaaga 437
>gb|BE216954.1|BE216954 EST0497 Triticum aestivum Lambda Zap Triticum aestivum cDNA clone
JA1_5C_C07_T3 5' similar to Putative chlorophyll a/b
binding protein, mRNA sequence
Length = 457
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 836 tgtgcaaaagcaatgcaaga 855
||||||||||||||||||||
Sbjct: 418 tgtgcaaaagcaatgcaaga 437
>gb|BG904776.1|BG904776 TaLr1134G10F TaLr1 Triticum aestivum cDNA clone TaLr1134G10 3',
mRNA sequence
Length = 671
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 836 tgtgcaaaagcaatgcaaga 855
||||||||||||||||||||
Sbjct: 127 tgtgcaaaagcaatgcaaga 108
>gb|BJ251375.1|BJ251375 BJ251375 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19n22 3', mRNA sequence
Length = 710
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 836 tgtgcaaaagcaatgcaaga 855
||||||||||||||||||||
Sbjct: 24 tgtgcaaaagcaatgcaaga 5
>gb|DN551591.1|DN551591 TaBs109D10 Triticum aestivum SSH cDNA library Triticum aestivum
cDNA, mRNA sequence
Length = 575
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 836 tgtgcaaaagcaatgcaaga 855
||||||||||||||||||||
Sbjct: 39 tgtgcaaaagcaatgcaaga 20
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 181,004
Number of Sequences: 636343
Number of extensions: 181004
Number of successful extensions: 50576
Number of sequences better than 0.5: 36
Number of HSP's better than 0.5 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50478
Number of HSP's gapped (non-prelim): 72
length of query: 1118
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1098
effective length of database: 354,513,379
effective search space: 389255690142
effective search space used: 389255690142
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)